View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7802_high_29 (Length: 304)
Name: NF7802_high_29
Description: NF7802
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7802_high_29 |
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Alignment Details
Target: chr4 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 13 - 281
Target Start/End: Complemental strand, 53857742 - 53857474
Alignment:
| Q |
13 |
aatatcgacattatccgtttaactagatctttcagacattatagcataattccatttctaacaagtagacaatgcatgaacttaaacacatgcatatgtc |
112 |
Q |
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| T |
53857742 |
aatatcgacattatccgtttaactagatctttcagacattatagcataattccatttctaacaagtagacaatgcatgaacttaaacacatgcatatgtc |
53857643 |
T |
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| Q |
113 |
taatatatgtctataaatgcaatgcaaagctctcaaagatgcttctatagaaccgacatgaaatgaagtaatctctttaaaccttttggaaacaattaaa |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
53857642 |
taatatatgtctataaatgcaatgcaaagctctcaaagatgcttctatagaaccgacatgaaatgaagtaatctctttaaaccttttggaaacaattaaa |
53857543 |
T |
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| Q |
213 |
gatgatgtttaatgtgttagagaggtgatgtaacctgctaactaacattatcattatttaggtggtgcc |
281 |
Q |
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||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
53857542 |
gatgatgtttaatgttttagagaggtgatgtaacctgctaactaacattatcattatttaggtggtgcc |
53857474 |
T |
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