View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7802_low_1 (Length: 770)

Name: NF7802_low_1
Description: NF7802
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7802_low_1
NF7802_low_1
[»] chr5 (56 HSPs)
chr5 (56-770)||(27328803-27329511)
chr5 (681-770)||(38879632-38879721)
chr5 (682-770)||(4619102-4619190)
chr5 (683-770)||(43334254-43334340)
chr5 (688-770)||(13801771-13801853)
chr5 (683-770)||(24448941-24449026)
chr5 (688-770)||(20135655-20135737)
chr5 (682-770)||(32703473-32703559)
chr5 (682-761)||(16957374-16957451)
chr5 (688-755)||(25622524-25622591)
chr5 (688-770)||(12006332-12006414)
chr5 (681-770)||(41014369-41014456)
chr5 (698-770)||(7097774-7097844)
chr5 (683-770)||(8169983-8170068)
chr5 (683-770)||(43574657-43574742)
chr5 (688-770)||(7368447-7368527)
chr5 (688-770)||(34154818-34154898)
chr5 (691-770)||(16880654-16880731)
chr5 (674-770)||(29334446-29334541)
chr5 (698-770)||(19142957-19143027)
chr5 (703-759)||(10306493-10306548)
chr5 (698-770)||(12477134-12477205)
chr5 (688-764)||(12575664-12575739)
chr5 (683-770)||(35710362-35710447)
chr5 (683-770)||(11657698-11657784)
chr5 (681-770)||(3771390-3771477)
chr5 (682-744)||(39801591-39801653)
chr5 (707-770)||(2838829-2838890)
chr5 (683-743)||(16028623-16028683)
chr5 (688-770)||(1565483-1565562)
chr5 (688-770)||(5873326-5873406)
chr5 (704-770)||(22600505-22600569)
chr5 (684-770)||(30006376-30006460)
chr5 (683-764)||(1405244-1405323)
chr5 (688-746)||(21784336-21784394)
chr5 (688-770)||(22187336-22187418)
chr5 (681-735)||(32354211-32354265)
chr5 (693-770)||(208936-209012)
chr5 (698-746)||(4654429-4654477)
chr5 (689-725)||(18684367-18684403)
chr5 (698-746)||(22861683-22861731)
chr5 (683-767)||(28516432-28516515)
chr5 (688-748)||(30877568-30877628)
chr5 (698-761)||(37225975-37226037)
chr5 (698-761)||(39079765-39079827)
chr5 (698-770)||(42924844-42924918)
chr5 (698-770)||(1850690-1850760)
chr5 (693-765)||(13774921-13774991)
chr5 (706-746)||(21542489-21542529)
chr5 (696-746)||(18426112-18426162)
chr5 (681-770)||(24313569-24313658)
chr5 (681-770)||(24355906-24355995)
chr5 (683-740)||(10943844-10943900)
chr5 (701-746)||(15141953-15141998)
chr5 (688-721)||(29184065-29184098)
chr5 (693-770)||(39301174-39301249)
[»] chr3 (57 HSPs)
chr3 (682-770)||(13628788-13628876)
chr3 (682-770)||(29366718-29366806)
chr3 (688-770)||(353353-353435)
chr3 (683-770)||(40272811-40272896)
chr3 (683-770)||(46421033-46421121)
chr3 (683-770)||(54484764-54484849)
chr3 (683-770)||(13730601-13730688)
chr3 (683-770)||(49013472-49013559)
chr3 (688-770)||(45786218-45786300)
chr3 (691-770)||(14987030-14987109)
chr3 (688-770)||(10795427-10795509)
chr3 (683-770)||(52926218-52926303)
chr3 (703-770)||(8247706-8247773)
chr3 (688-770)||(22609838-22609918)
chr3 (698-764)||(829456-829521)
chr3 (683-770)||(1217161-1217246)
chr3 (683-770)||(15797293-15797378)
chr3 (683-770)||(26869779-26869864)
chr3 (683-770)||(34771363-34771448)
chr3 (683-758)||(5173718-5173793)
chr3 (688-770)||(22122921-22123001)
chr3 (688-770)||(31592920-31593000)
chr3 (688-770)||(39203587-39203667)
chr3 (682-767)||(25517168-25517251)
chr3 (682-770)||(16735513-16735599)
chr3 (698-770)||(26573200-26573270)
chr3 (698-770)||(45948852-45948922)
chr3 (701-770)||(54374362-54374430)
chr3 (683-770)||(516482-516570)
chr3 (698-770)||(34420657-34420728)
chr3 (683-770)||(53996564-53996650)
chr3 (698-770)||(6411836-6411906)
chr3 (701-770)||(9607276-9607345)
chr3 (683-746)||(24851300-24851363)
chr3 (702-769)||(25944543-25944609)
chr3 (682-744)||(30452892-30452954)
chr3 (700-770)||(33926155-33926224)
chr3 (682-739)||(10484614-10484671)
chr3 (682-770)||(12914033-12914119)
chr3 (683-770)||(7943063-7943148)
chr3 (683-746)||(44403554-44403617)
chr3 (683-729)||(40390353-40390399)
chr3 (704-770)||(45139497-45139562)
chr3 (684-770)||(55401249-55401334)
chr3 (683-732)||(47624208-47624257)
chr3 (703-770)||(9276337-9276401)
chr3 (688-744)||(14266376-14266431)
chr3 (685-760)||(43114869-43114942)
chr3 (715-770)||(47624114-47624167)
chr3 (682-763)||(26292410-26292490)
chr3 (682-725)||(54032569-54032612)
chr3 (683-725)||(4495675-4495717)
chr3 (688-746)||(35417999-35418057)
chr3 (688-770)||(19731075-19731155)
chr3 (696-746)||(46169979-46170029)
chr3 (681-746)||(40968613-40968678)
chr3 (683-763)||(50624952-50625030)
[»] chr6 (38 HSPs)
chr6 (683-770)||(29355854-29355941)
chr6 (683-770)||(12221913-12222001)
chr6 (683-770)||(9161173-9161260)
chr6 (681-770)||(1354754-1354841)
chr6 (683-764)||(12892064-12892145)
chr6 (683-770)||(1347013-1347098)
chr6 (681-765)||(12885967-12886051)
chr6 (683-770)||(2166409-2166496)
chr6 (683-770)||(2178042-2178129)
chr6 (688-758)||(14975094-14975164)
chr6 (683-747)||(6808467-6808531)
chr6 (698-770)||(7947385-7947456)
chr6 (683-770)||(26097209-26097294)
chr6 (691-765)||(3815084-3815156)
chr6 (683-765)||(3116128-3116210)
chr6 (683-758)||(13267788-13267861)
chr6 (683-770)||(25557774-25557859)
chr6 (682-764)||(23930125-23930205)
chr6 (698-770)||(2755434-2755508)
chr6 (688-770)||(17432397-17432479)
chr6 (700-746)||(24097650-24097696)
chr6 (683-737)||(30786373-30786427)
chr6 (701-770)||(32579476-32579543)
chr6 (688-763)||(383764-383837)
chr6 (688-744)||(10734909-10734965)
chr6 (702-770)||(24734693-24734760)
chr6 (690-746)||(34850609-34850665)
chr6 (701-744)||(11395836-11395879)
chr6 (700-759)||(11849115-11849173)
chr6 (693-759)||(19340889-19340954)
chr6 (698-770)||(33138884-33138954)
chr6 (722-770)||(6024284-6024332)
chr6 (698-746)||(15866053-15866101)
chr6 (683-746)||(9671083-9671146)
chr6 (698-764)||(23240838-23240902)
chr6 (688-769)||(12889478-12889558)
chr6 (735-764)||(20908877-20908906)
chr6 (735-764)||(20923325-20923354)
[»] chr8 (53 HSPs)
chr8 (682-770)||(39460992-39461080)
chr8 (690-770)||(20284075-20284155)
chr8 (690-770)||(21070703-21070783)
chr8 (683-767)||(25250576-25250660)
chr8 (683-770)||(28817625-28817710)
chr8 (691-770)||(7136534-7136613)
chr8 (683-770)||(20869974-20870061)
chr8 (683-770)||(6760873-6760960)
chr8 (688-770)||(17250880-17250961)
chr8 (682-770)||(36720847-36720933)
chr8 (690-770)||(44530200-44530278)
chr8 (690-770)||(16225070-16225150)
chr8 (682-770)||(26954184-26954272)
chr8 (683-770)||(35261730-35261815)
chr8 (688-770)||(13160752-13160832)
chr8 (688-770)||(45071315-45071395)
chr8 (682-770)||(12625941-12626027)
chr8 (698-770)||(29877145-29877215)
chr8 (691-770)||(12670257-12670334)
chr8 (683-770)||(30454096-30454181)
chr8 (689-770)||(5689682-5689761)
chr8 (690-744)||(27507985-27508039)
chr8 (689-770)||(29521690-29521769)
chr8 (683-770)||(8897763-8897848)
chr8 (683-770)||(10857880-10857965)
chr8 (682-769)||(31457224-31457309)
chr8 (698-770)||(44781518-44781590)
chr8 (682-764)||(16013511-16013594)
chr8 (688-770)||(17823627-17823707)
chr8 (683-760)||(26102578-26102653)
chr8 (693-769)||(8483947-8484021)
chr8 (688-769)||(42083702-42083782)
chr8 (683-770)||(5135289-5135373)
chr8 (683-739)||(18595918-18595974)
chr8 (704-770)||(24365079-24365143)
chr8 (688-746)||(28407476-28407534)
chr8 (688-770)||(44742522-44742603)
chr8 (698-770)||(19729391-19729461)
chr8 (683-770)||(26457780-26457863)
chr8 (683-770)||(18164759-18164844)
chr8 (683-746)||(35107310-35107373)
chr8 (683-733)||(27468091-27468141)
chr8 (728-770)||(43942375-43942417)
chr8 (698-770)||(2626573-2626643)
chr8 (697-770)||(30231343-30231415)
chr8 (683-770)||(389696-389781)
chr8 (705-770)||(11000970-11001033)
chr8 (688-770)||(33867001-33867083)
chr8 (688-745)||(36486570-36486627)
chr8 (703-762)||(24245505-24245565)
chr8 (707-770)||(20869523-20869582)
chr8 (692-770)||(31454245-31454323)
chr8 (698-770)||(22598208-22598277)
[»] chr2 (64 HSPs)
chr2 (688-770)||(10543749-10543831)
chr2 (688-770)||(14530369-14530451)
chr2 (682-770)||(9671230-9671316)
chr2 (683-770)||(10546214-10546299)
chr2 (682-770)||(8455314-8455400)
chr2 (683-770)||(25249737-25249822)
chr2 (682-770)||(5841079-5841167)
chr2 (683-770)||(36871543-36871627)
chr2 (683-770)||(24200622-24200709)
chr2 (682-770)||(21779259-21779345)
chr2 (683-770)||(14444779-14444864)
chr2 (683-770)||(17668053-17668138)
chr2 (683-770)||(17896311-17896396)
chr2 (689-765)||(23488537-23488613)
chr2 (688-770)||(25632560-25632640)
chr2 (683-768)||(24859987-24860070)
chr2 (682-770)||(11514487-11514572)
chr2 (698-770)||(24890462-24890532)
chr2 (682-770)||(39914304-39914389)
chr2 (683-770)||(17623615-17623700)
chr2 (698-770)||(19615043-19615114)
chr2 (683-770)||(27573671-27573756)
chr2 (688-770)||(25079721-25079801)
chr2 (688-770)||(40762238-40762318)
chr2 (682-770)||(26684617-26684704)
chr2 (681-770)||(44643574-44643661)
chr2 (698-770)||(19977728-19977798)
chr2 (691-744)||(34766330-34766383)
chr2 (688-745)||(40579753-40579810)
chr2 (700-766)||(4516367-4516431)
chr2 (683-770)||(7214585-7214672)
chr2 (688-770)||(13245099-13245179)
chr2 (704-770)||(21377093-21377157)
chr2 (688-770)||(23397815-23397895)
chr2 (701-760)||(31158456-31158515)
chr2 (682-744)||(34080176-34080238)
chr2 (695-764)||(19185754-19185823)
chr2 (700-764)||(25641558-25641620)
chr2 (688-745)||(41409936-41409993)
chr2 (684-732)||(124914-124962)
chr2 (698-770)||(44449397-44449468)
chr2 (704-770)||(32781308-32781372)
chr2 (700-769)||(99281-99348)
chr2 (682-732)||(22371199-22371249)
chr2 (698-770)||(12023933-12024003)
chr2 (698-766)||(39499244-39499310)
chr2 (698-746)||(14544139-14544187)
chr2 (715-770)||(22371105-22371158)
chr2 (688-739)||(8575975-8576026)
chr2 (684-770)||(31821343-31821427)
chr2 (700-745)||(24059012-24059057)
chr2 (698-770)||(17471600-17471671)
chr2 (698-746)||(31523304-31523352)
chr2 (683-735)||(39189503-39189555)
chr2 (699-770)||(15296421-15296491)
chr2 (683-748)||(1289093-1289159)
chr2 (688-738)||(3633712-3633762)
chr2 (683-765)||(4795810-4795891)
chr2 (696-738)||(22363507-22363549)
chr2 (688-769)||(40416875-40416954)
chr2 (722-770)||(23145736-23145782)
chr2 (722-770)||(23557526-23557572)
chr2 (698-770)||(30826087-30826156)
chr2 (704-745)||(33795359-33795400)
[»] chr1 (71 HSPs)
chr1 (682-770)||(10668299-10668387)
chr1 (683-770)||(27201721-27201808)
chr1 (681-770)||(35005197-35005286)
chr1 (683-770)||(18944717-18944805)
chr1 (682-770)||(20004088-20004176)
chr1 (682-770)||(30395724-30395812)
chr1 (688-770)||(4349712-4349792)
chr1 (679-770)||(19414511-19414600)
chr1 (691-770)||(18741964-18742043)
chr1 (683-770)||(45812536-45812621)
chr1 (683-770)||(46247952-46248037)
chr1 (683-770)||(42304206-42304293)
chr1 (683-758)||(50606487-50606562)
chr1 (688-765)||(45402175-45402250)
chr1 (682-770)||(34725096-34725182)
chr1 (683-770)||(1517310-1517395)
chr1 (683-770)||(6925174-6925259)
chr1 (683-770)||(35253186-35253271)
chr1 (704-770)||(15505638-15505702)
chr1 (688-770)||(46991878-46991958)
chr1 (681-770)||(9939535-9939625)
chr1 (681-770)||(14617112-14617199)
chr1 (688-770)||(19932757-19932839)
chr1 (689-770)||(23768325-23768404)
chr1 (682-766)||(27474358-27474440)
chr1 (698-770)||(32632571-32632641)
chr1 (698-770)||(19701644-19701715)
chr1 (683-770)||(31382213-31382298)
chr1 (683-770)||(38478281-38478366)
chr1 (688-770)||(10378739-10378819)
chr1 (693-770)||(35117774-35117852)
chr1 (698-770)||(12126851-12126921)
chr1 (682-770)||(41319804-41319890)
chr1 (698-770)||(2435800-2435871)
chr1 (682-769)||(20999848-20999933)
chr1 (698-770)||(22324966-22325037)
chr1 (683-770)||(43768213-43768298)
chr1 (704-770)||(11596586-11596650)
chr1 (691-770)||(31442396-31442474)
chr1 (688-770)||(39214962-39215043)
chr1 (689-746)||(4587568-4587625)
chr1 (698-770)||(47214583-47214653)
chr1 (683-770)||(23796539-23796624)
chr1 (683-770)||(35019304-35019388)
chr1 (698-770)||(45264413-45264484)
chr1 (698-770)||(50812014-50812084)
chr1 (682-764)||(6983809-6983889)
chr1 (704-770)||(44485129-44485193)
chr1 (698-763)||(4249457-4249520)
chr1 (698-763)||(4249781-4249844)
chr1 (698-763)||(4250105-4250168)
chr1 (700-766)||(6358199-6358264)
chr1 (698-744)||(33594145-33594191)
chr1 (688-770)||(15511152-15511235)
chr1 (698-770)||(17470361-17470430)
chr1 (693-746)||(30555211-30555264)
chr1 (683-770)||(8197117-8197202)
chr1 (681-769)||(19974071-19974158)
chr1 (707-770)||(21910673-21910733)
chr1 (698-738)||(25554756-25554796)
chr1 (704-746)||(30682908-30682950)
chr1 (699-767)||(4430014-4430080)
chr1 (706-770)||(25468285-25468347)
chr1 (683-731)||(50760239-50760287)
chr1 (704-770)||(18724565-18724629)
chr1 (698-767)||(7074593-7074661)
chr1 (708-764)||(20036301-20036355)
chr1 (683-732)||(22327206-22327255)
chr1 (693-761)||(23371206-23371271)
chr1 (729-770)||(27136696-27136736)
chr1 (683-760)||(43207579-43207655)
[»] chr4 (78 HSPs)
chr4 (683-770)||(20639657-20639743)
chr4 (683-770)||(23501838-23501925)
chr4 (688-770)||(20225125-20225207)
chr4 (683-760)||(33836486-33836563)
chr4 (682-770)||(16911613-16911701)
chr4 (698-770)||(20908650-20908721)
chr4 (683-770)||(13256398-13256485)
chr4 (688-770)||(7909284-7909365)
chr4 (683-770)||(16408600-16408687)
chr4 (683-766)||(30352579-30352662)
chr4 (688-767)||(44363134-44363213)
chr4 (688-770)||(21647015-21647097)
chr4 (683-770)||(5648309-5648394)
chr4 (688-764)||(20405144-20405220)
chr4 (698-770)||(54730301-54730373)
chr4 (688-770)||(6430630-6430710)
chr4 (688-770)||(20225033-20225113)
chr4 (688-770)||(29207902-29207982)
chr4 (705-770)||(49796848-49796911)
chr4 (689-770)||(21489138-21489218)
chr4 (698-770)||(30690190-30690260)
chr4 (688-749)||(38755912-38755973)
chr4 (683-770)||(25629100-25629185)
chr4 (683-770)||(30639430-30639515)
chr4 (683-770)||(35567221-35567306)
chr4 (683-770)||(54175114-54175201)
chr4 (688-770)||(40915879-40915959)
chr4 (681-770)||(51865035-51865122)
chr4 (683-770)||(9832312-9832397)
chr4 (683-770)||(47444008-47444093)
chr4 (683-770)||(47528529-47528614)
chr4 (683-770)||(48598824-48598909)
chr4 (703-770)||(2813176-2813243)
chr4 (688-770)||(8473624-8473706)
chr4 (688-746)||(11394925-11394983)
chr4 (688-746)||(11404652-11404710)
chr4 (683-745)||(32484307-32484369)
chr4 (688-745)||(40553941-40553998)
chr4 (688-767)||(10660458-10660537)
chr4 (688-767)||(10874603-10874682)
chr4 (683-770)||(11054147-11054232)
chr4 (683-767)||(36816383-36816466)
chr4 (683-770)||(5306659-5306748)
chr4 (700-770)||(14983885-14983953)
chr4 (683-746)||(38786682-38786745)
chr4 (691-770)||(48327770-48327849)
chr4 (688-746)||(25388249-25388307)
chr4 (698-752)||(47482864-47482918)
chr4 (698-770)||(19027899-19027969)
chr4 (683-770)||(9987833-9987918)
chr4 (703-770)||(17043413-17043478)
chr4 (683-734)||(35532077-35532128)
chr4 (702-761)||(49938611-49938669)
chr4 (700-766)||(16494272-16494338)
chr4 (704-769)||(25463174-25463237)
chr4 (700-770)||(30581481-30581550)
chr4 (683-749)||(50555655-50555721)
chr4 (696-749)||(8820578-8820631)
chr4 (688-745)||(44718641-44718698)
chr4 (702-770)||(39029078-39029145)
chr4 (683-770)||(39077795-39077880)
chr4 (683-746)||(28494224-28494287)
chr4 (688-755)||(36589809-36589875)
chr4 (688-770)||(55766470-55766550)
chr4 (704-746)||(32478811-32478853)
chr4 (697-770)||(37494902-37494973)
chr4 (682-762)||(7038111-7038189)
chr4 (683-770)||(10277756-10277841)
chr4 (702-770)||(25343238-25343306)
chr4 (698-733)||(37038137-37038172)
chr4 (704-770)||(47441550-47441614)
chr4 (704-746)||(54967093-54967135)
chr4 (683-744)||(19027986-19028047)
chr4 (698-770)||(30496336-30496406)
chr4 (727-764)||(35894504-35894540)
chr4 (698-770)||(41018808-41018878)
chr4 (697-734)||(48202395-48202432)
chr4 (698-766)||(55830735-55830801)
[»] chr7 (59 HSPs)
chr7 (683-770)||(42805575-42805662)
chr7 (688-770)||(47716510-47716592)
chr7 (683-770)||(7879689-7879774)
chr7 (683-770)||(43557523-43557611)
chr7 (681-770)||(21172006-21172093)
chr7 (683-770)||(34626207-34626292)
chr7 (683-770)||(42391099-42391184)
chr7 (683-770)||(42798720-42798805)
chr7 (688-770)||(18747538-18747618)
chr7 (683-769)||(27889315-27889399)
chr7 (688-770)||(48735126-48735206)
chr7 (683-765)||(21566491-21566572)
chr7 (691-770)||(2541026-2541103)
chr7 (683-770)||(32758310-32758395)
chr7 (688-770)||(10693077-10693157)
chr7 (688-770)||(18512457-18512537)
chr7 (684-770)||(33871910-33871994)
chr7 (698-769)||(39123945-39124016)
chr7 (681-770)||(40463927-40464014)
chr7 (688-769)||(45018927-45019010)
chr7 (688-770)||(11617592-11617672)
chr7 (688-770)||(29907470-29907549)
chr7 (683-760)||(38262195-38262270)
chr7 (698-770)||(23231608-23231678)
chr7 (682-770)||(31591107-31591193)
chr7 (682-770)||(35787267-35787353)
chr7 (713-770)||(46354245-46354302)
chr7 (691-770)||(22698974-22699054)
chr7 (691-770)||(35334823-35334900)
chr7 (703-770)||(38604577-38604642)
chr7 (699-770)||(33500564-33500635)
chr7 (705-770)||(19266501-19266564)
chr7 (683-764)||(47077854-47077933)
chr7 (699-764)||(3469190-3469255)
chr7 (683-770)||(1408508-1408593)
chr7 (698-770)||(14732835-14732906)
chr7 (683-770)||(19265865-19265949)
chr7 (683-770)||(27629685-27629770)
chr7 (698-768)||(36267831-36267900)
chr7 (688-770)||(11741844-11741924)
chr7 (704-770)||(13805152-13805216)
chr7 (708-770)||(14099030-14099090)
chr7 (708-770)||(14409047-14409107)
chr7 (688-770)||(23419678-23419758)
chr7 (703-770)||(35203490-35203557)
chr7 (698-770)||(13792164-13792235)
chr7 (683-770)||(19426889-19426973)
chr7 (698-746)||(21139762-21139810)
chr7 (704-770)||(28362165-28362229)
chr7 (688-770)||(42476922-42477002)
chr7 (683-725)||(36602541-36602583)
chr7 (698-735)||(42495876-42495913)
chr7 (703-758)||(28078151-28078204)
chr7 (696-770)||(8148958-8149029)
chr7 (683-746)||(23618976-23619039)
chr7 (709-763)||(7645014-7645066)
chr7 (688-770)||(16341329-16341410)
chr7 (706-770)||(2662958-2663019)
chr7 (699-744)||(42101899-42101944)
[»] scaffold0049 (1 HSPs)
scaffold0049 (688-770)||(59028-59110)
[»] scaffold0057 (4 HSPs)
scaffold0057 (683-770)||(24771-24856)
scaffold0057 (683-770)||(46882-46967)
scaffold0057 (696-770)||(46719-46792)
scaffold0057 (698-770)||(43708-43779)
[»] scaffold0015 (1 HSPs)
scaffold0015 (682-770)||(48632-48718)
[»] scaffold0168 (1 HSPs)
scaffold0168 (683-767)||(30631-30713)
[»] scaffold0258 (1 HSPs)
scaffold0258 (683-770)||(13023-13108)
[»] scaffold0180 (1 HSPs)
scaffold0180 (683-770)||(24132-24217)
[»] scaffold1176 (1 HSPs)
scaffold1176 (684-770)||(1587-1671)
[»] scaffold0311 (1 HSPs)
scaffold0311 (689-767)||(10864-10940)
[»] scaffold0954 (1 HSPs)
scaffold0954 (698-770)||(3595-3665)
[»] scaffold0223 (1 HSPs)
scaffold0223 (688-770)||(11180-11260)
[»] scaffold0018 (1 HSPs)
scaffold0018 (688-770)||(72871-72951)
[»] scaffold0187 (2 HSPs)
scaffold0187 (688-770)||(10054-10134)
scaffold0187 (688-770)||(20382-20462)
[»] scaffold0254 (1 HSPs)
scaffold0254 (721-770)||(4208-4258)


Alignment Details
Target: chr5 (Bit Score: 602; Significance: 0; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 602; E-Value: 0
Query Start/End: Original strand, 56 - 770
Target Start/End: Complemental strand, 27329511 - 27328803
Alignment:
Q  56 ttaaatagtggaccgatcaggatttcttattagcaaaaaccacattacataaccatacaccaaattataattccacgcattaatttacaagttaaaacta 155  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27329511 ttaaaaagtggaccgatcaggatttcttattagcaaaaaccacgttacataaccatacaccaaattataattccacgcattaatttacaagttaaaacta 27329412  T
Q  156 aattttgaaagaccaaacttacaattattacttatgcaagcaagcataacaaagtttttatttaaattcgaatataatctaagcaagaatttctcgctaa 255  Q
    ||||||||||||||||||||||||||||||||||||||||||    |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  27329411 aattttgaaagaccaaacttacaattattacttatgcaagca----taacaaagtttttatttaaattcgaatataatctaagcaagaatttcttgctaa 27329316  T
Q  256 ttcacgactttgttgaagctgcaagtaatctctgtatgtaatgcctctatatgctgaggggttatccttgctaagcagctctggtgcaggggtgacaatg 355  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27329315 ttcacgactttgttgaagctgcaagtaatctctgtatgtaatgcctctatatgctgaggggttatccttgctaagcagctctggtgcaggggtgacaatg 27329216  T
Q  356 gtgtcaagtgtgggcccatgtgctgtaccaacagaaattcttgcagctttcttattcatcaccacagcacgatgaacaatactcttgtatttcccattgg 455  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27329215 gtgtcaagagtgggcccatgtgctgtcccaacagaaattcttgcagctttcttattcatcaccacagcacgatgaacaatactcttgtatttcccattgg 27329116  T
Q  456 taattatctgaagacaaatatggaacatcaattagccaattatgtgtttctttaacaaaaacaggtttggtaaggataattaaaatcaattttgataatt 555  Q
    |||||||||||||||||||||||||||||||||||| | |||||| ||||||| ||  ||||| ||||||| ||||||||||||||||||||||||||||    
T  27329115 taattatctgaagacaaatatggaacatcaattagctacttatgtttttcttt-accgaaacatgtttggttaggataattaaaatcaattttgataatt 27329017  T
Q  556 tctataatgaaagcataaactttgcttgcacagacacttctaatcgaagaaatgtctaggtgtcagacacatatcgtgtcagacaccgtcacgacactga 655  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||    
T  27329016 tctataatgaaagcataaactttgcttgaacagacacttctaatcgaagaaatgtctaggtgtcagacacatatcgtgtcagacaccgtcataacattga 27328917  T
Q  656 catttgtgatttgcatttaattatgttaaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgta 755  Q
    || |||||| || |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27328916 cacttgtga-ttacatttaattatgttaaaaaggcaatccgatgcattaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgta 27328818  T
Q  756 ttgtacgcagcctta 770  Q
    |||||||||||||||    
T  27328817 ttgtacgcagcctta 27328803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 681 - 770
Target Start/End: Complemental strand, 38879721 - 38879632
Alignment:
Q  681 ttaaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  38879721 ttaaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagcctta 38879632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 682 - 770
Target Start/End: Original strand, 4619102 - 4619190
Alignment:
Q  682 taaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||| ||||||||| ||||||||||||| |||||| || |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  4619102 taaaagggcaacccggtgcactaaagctctcgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagcctta 4619190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 683 - 770
Target Start/End: Complemental strand, 43334340 - 43334254
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  43334340 aaaagggcaacccggtgcactaaagctcccgcat-cgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagcctta 43334254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 688 - 770
Target Start/End: Original strand, 13801771 - 13801853
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||| ||||||||||||| |||||| || |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  13801771 ggcaacccggtgcactaaagctctcgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagcctta 13801853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 683 - 770
Target Start/End: Complemental strand, 24449026 - 24448941
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||    
T  24449026 aaaagggcaacccggtgcactaaagctcctgcatacgcagggtccgggaaggggtcccaccat--ttggtgtattgtacgcagcctta 24448941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 688 - 770
Target Start/End: Complemental strand, 20135737 - 20135655
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||| |||||| ||||||| ||||| || |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  20135737 ggcaacccggtgcactgaagctcctgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagcctta 20135655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 682 - 770
Target Start/End: Complemental strand, 32703559 - 32703473
Alignment:
Q  682 taaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||| ||||||||| ||||||| |||||||||||| ||||||| |||||||||||||||||||  |||||||||||||||||||||||    
T  32703559 taaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccat--ttggtgtattgtacgcagcctta 32703473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 682 - 761
Target Start/End: Complemental strand, 16957451 - 16957374
Alignment:
Q  682 taaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtac 761  Q
    ||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||    
T  16957451 taaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccat--ttggtgtattgtac 16957374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 688 - 755
Target Start/End: Complemental strand, 25622591 - 25622524
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgta 755  Q
    ||||| ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  25622591 ggcaatccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgta 25622524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 688 - 770
Target Start/End: Original strand, 12006332 - 12006414
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||| || |||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||| | |||||||    
T  12006332 ggcaacacggtgcactaaagctcccgcataggcagggtctgggaaggggtcccaccattattggtgtattgtatggagcctta 12006414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 681 - 770
Target Start/End: Complemental strand, 41014456 - 41014369
Alignment:
Q  681 ttaaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||| ||||||||| |||||||||||||||||||| || |||| | |||||||||||||||||  |||||||||||||||||||||||    
T  41014456 ttaaaagggcaacccggtgcactaaagctcccgcatatgcggggtccaggaaggggtcccaccat--ttggtgtattgtacgcagcctta 41014369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 698 - 770
Target Start/End: Original strand, 7097774 - 7097844
Alignment:
Q  698 tgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||| |||||    
T  7097774 tgcactaaagctcccgcatacgcagggttcgggaaggggtctcaccat--ttggtgtattgtacgcaacctta 7097844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 683 - 770
Target Start/End: Original strand, 8169983 - 8170068
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||||||| |||||| || |||||||||| ||||||| |||||||||||||||||||  |||||||||||||||||||||||    
T  8169983 aaaagggcaacccggtgcactgaaactcccgcatatgcagggtccgggaaggggtcccaccat--ttggtgtattgtacgcagcctta 8170068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 683 - 770
Target Start/End: Complemental strand, 43574742 - 43574657
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||| ||| |||| ||| |||||||||||||||||||||||| |||||||||||||||||||  ||||| |||||||||||||||||    
T  43574742 aaaaaagcatcccggtgctctaaagctcccgcatacgcagggtccgggaaggggtcccaccat--ttggtatattgtacgcagcctta 43574657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 688 - 770
Target Start/End: Complemental strand, 7368527 - 7368447
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||| ||||||| ||||||| |||| ||||||| ||||||||||||||||||  ||||||||||||||||||||||||    
T  7368527 ggcaacccggtgcactagagctcccacatatgcagggtccgggaaggggtcccacca--attggtgtattgtacgcagcctta 7368447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 688 - 770
Target Start/End: Original strand, 34154818 - 34154898
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||| ||||||| |||| ||||||| ||||||| |||||||||||||||||||  |||||||||||||||||||||||    
T  34154818 ggcaacccggtgcactagagctaccgcatatgcagggtccgggaaggggtcccaccat--ttggtgtattgtacgcagcctta 34154898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 691 - 770
Target Start/End: Original strand, 16880654 - 16880731
Alignment:
Q  691 aacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||| |||||||||||||||||||||||| ||| ||||||| |||| ||||||  |||||||||||||||||||||||    
T  16880654 aacccggtgcactaaagctcccgcatacgcatggtccgggaagtggtcacaccat--ttggtgtattgtacgcagcctta 16880731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 674 - 770
Target Start/End: Complemental strand, 29334541 - 29334446
Alignment:
Q  674 aattatgttaaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||| ||||||| |||| |||| |||| ||||| |||| |||||||||||| |||||| |||||||||||||  ||||||||||||||||||||||    
T  29334541 aattaagttaaaagggcagcccggtgcattaaagatcccacatacgcagggtccgggaatgggtcccaccatt-ctggtgtattgtacgcagcctta 29334446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 698 - 770
Target Start/End: Original strand, 19142957 - 19143027
Alignment:
Q  698 tgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||| |||||||||||||| ||| |||||||||||||||||||  |||||||| ||||||||||||||    
T  19142957 tgcactaaatctcccgcatacgcatggtccgggaaggggtcccaccat--ttggtgtactgtacgcagcctta 19143027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 703 - 759
Target Start/End: Original strand, 10306493 - 10306548
Alignment:
Q  703 taaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgt 759  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  10306493 taaagctcccgcatacgcagggtccgggaaggggtcccaccatt-ttggtgtattgt 10306548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 698 - 770
Target Start/End: Original strand, 12477134 - 12477205
Alignment:
Q  698 tgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||||||||||  ||||||||||  | |||||||||||||||||||| |||||||||||||||||||||||    
T  12477134 tgcactaaagctcttgcatacgcagaatccgggaaggggtcccaccatt-ttggtgtattgtacgcagcctta 12477205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 688 - 764
Target Start/End: Original strand, 12575664 - 12575739
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgca 764  Q
    |||| |||| ||||| |||||||| ||||||||||||| | |||||||||||||||||| |||||||||||||||||    
T  12575664 ggcagcccggtgcaccaaagctcctgcatacgcagggtccaggaaggggtcccaccatt-ttggtgtattgtacgca 12575739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 683 - 770
Target Start/End: Complemental strand, 35710447 - 35710362
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||||||| ||||||| |||||||||||| ||| | | |||||||||||||||||||  ||||||||||| |||||||||||    
T  35710447 aaaagggcaacccggtgcactagagctcccgcatatgcatgttccgggaaggggtcccaccat--ttggtgtattgaacgcagcctta 35710362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 683 - 770
Target Start/End: Original strand, 11657698 - 11657784
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| |||| |||| || ||||||| |||||| |  |||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  11657698 aaaagggcagcccggtgaactaaagttcccgcgtgtgcagggttcgggaaggggtcccaccatt-ttggtgtattgtatgcagcctta 11657784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 681 - 770
Target Start/End: Complemental strand, 3771477 - 3771390
Alignment:
Q  681 ttaaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||| |||| |||| ||||||||||||||| ||||| ||| || ||||||||||||||||||  ||||||||||||| | ||||||||    
T  3771477 ttaaaagggcagcccggtgcactaaagctcccacatacacagagtccgggaaggggtcccacca--attggtgtattgttcacagcctta 3771390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 682 - 744
Target Start/End: Complemental strand, 39801653 - 39801591
Alignment:
Q  682 taaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccacca 744  Q
    ||||| ||||||||| |||||||||||||||||||||| |||||  |||||||||||||||||    
T  39801653 taaaatggcaacccggtgcactaaagctcccgcatacgtagggtctgggaaggggtcccacca 39801591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 707 - 770
Target Start/End: Complemental strand, 2838890 - 2838829
Alignment:
Q  707 gctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||||||||||||| || |||||| |||||||||  |||||||||||||||||||||||    
T  2838890 gctcccgcatacgcagggtccgagaagggatcccaccat--ttggtgtattgtacgcagcctta 2838829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 683 - 743
Target Start/End: Original strand, 16028623 - 16028683
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccacc 743  Q
    |||| ||||||||| ||||||| |||||||||||| ||||||| |||||||||||||||||    
T  16028623 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacc 16028683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 688 - 770
Target Start/End: Complemental strand, 1565562 - 1565483
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||| |||||||| |||||| |||| ||||||| |||||||||||||| ||||  |||||| ||||||||||||||||    
T  1565562 ggcaacccggtgcactaa-gctcccacatatgcagggtccgggaaggggtcccgccat--ttggtgcattgtacgcagcctta 1565483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 688 - 770
Target Start/End: Original strand, 5873326 - 5873406
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| |||||||||||||||||||||||||||||| || |||| ||| |||||||||  ||||||||| |||||  |||||||    
T  5873326 ggcatcccgatgcactaaagctcccgcatacgcagtgtccggggaggagtcccacca--attggtgtagtgtacttagcctta 5873406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 704 - 770
Target Start/End: Complemental strand, 22600569 - 22600505
Alignment:
Q  704 aaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||||||||||||||||| | ||||||||| |||||||||  |||||||||||||| ||||||||    
T  22600569 aaagctcccgcatacgcaggatccgggaagggatcccaccat--ttggtgtattgtacacagcctta 22600505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 684 - 770
Target Start/End: Complemental strand, 30006460 - 30006376
Alignment:
Q  684 aaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||||||| |||||||||||||||||||||  |||   |||||||||||||||||||  || ||||| ||||| ||||||||    
T  30006460 aaaaggcaacccggtgcactaaagctcccgcatacataggccccgggaaggggtcccaccat--ttagtgtaatgtacacagcctta 30006376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 683 - 764
Target Start/End: Complemental strand, 1405323 - 1405244
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgca 764  Q
    |||| ||||| ||| || |||| |||||||||||| ||||||||| |||| ||||||||||||  |||||||||||||||||    
T  1405323 aaaagggcaatccggtgtactagagctcccgcatatgcagggttcaggaaagggtcccaccat--ttggtgtattgtacgca 1405244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 688 - 746
Target Start/End: Original strand, 21784336 - 21784394
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccatt 746  Q
    |||||| || ||||||||| |||||||||||||||||| ||| ||||||||||||||||    
T  21784336 ggcaactcggtgcactaaacctcccgcatacgcagggtccggaaaggggtcccaccatt 21784394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 688 - 770
Target Start/End: Complemental strand, 22187418 - 22187336
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||| |||||||||||||||| ||||| | |||||| ||||||||||| ||   || |||||||||||||||||| ||||    
T  22187418 ggcaacctgatgcactaaagctcctgcatatgtagggtttgggaaggggtctcattgtttttggtgtattgtacgcagtctta 22187336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 681 - 735
Target Start/End: Complemental strand, 32354265 - 32354211
Alignment:
Q  681 ttaaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggg 735  Q
    |||||| ||||||||| ||||||||||||||||||||| |||||| |||||||||    
T  32354265 ttaaaagggcaacccggtgcactaaagctcccgcatacacagggtccgggaaggg 32354211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 693 - 770
Target Start/End: Original strand, 208936 - 209012
Alignment:
Q  693 cccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| |||||||||||||  |||||| |||||| | |||||||||||||||||| ||||||||||| | |||||||||    
T  208936 cccggtgcactaaagctcttgcatacccagggtccaggaaggggtcccaccatt-ttggtgtattgaatgcagcctta 209012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 698 - 746
Target Start/End: Original strand, 4654429 - 4654477
Alignment:
Q  698 tgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccatt 746  Q
    |||||||||||||||||||| |||||||||| |||||| ||||||||||    
T  4654429 tgcactaaagctcccgcatatgcagggttcgagaagggatcccaccatt 4654477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 689 - 725
Target Start/End: Complemental strand, 18684403 - 18684367
Alignment:
Q  689 gcaacccgatgcactaaagctcccgcatacgcagggt 725  Q
    |||||||||||||||||||||||||||||||||||||    
T  18684403 gcaacccgatgcactaaagctcccgcatacgcagggt 18684367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 698 - 746
Target Start/End: Original strand, 22861683 - 22861731
Alignment:
Q  698 tgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccatt 746  Q
    ||||||| |||||||||||| |||||||||| |||||||||||||||||    
T  22861683 tgcactagagctcccgcatatgcagggttcgagaaggggtcccaccatt 22861731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 683 - 767
Target Start/End: Original strand, 28516432 - 28516515
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcc 767  Q
    |||| ||||||| | | |||||||||||| |||| ||||||||  ||||| ||||||||||||| ||| ||||||||||||||||    
T  28516432 aaaagggcaacctggtccactaaagctcctgcatgcgcagggtctgggaatgggtcccaccatt-ttgatgtattgtacgcagcc 28516515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 688 - 748
Target Start/End: Original strand, 30877568 - 30877628
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattat 748  Q
    ||||||||| ||||||| ||||||| |||| ||||||| ||||||||||||||||| ||||    
T  30877568 ggcaacccggtgcactagagctcccacatatgcagggtccgggaaggggtcccacctttat 30877628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 698 - 761
Target Start/End: Original strand, 37225975 - 37226037
Alignment:
Q  698 tgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtac 761  Q
    ||||||||| |||  ||||||||| |||||||||||||||||||||||| ||| ||||||||||    
T  37225975 tgcactaaacctctggcatacgcatggttcgggaaggggtcccaccatt-ttgttgtattgtac 37226037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 698 - 761
Target Start/End: Original strand, 39079765 - 39079827
Alignment:
Q  698 tgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtac 761  Q
    ||||||||| |||||| |||| || ||| |||||||||||||||||||| ||||||||||||||    
T  39079765 tgcactaaaactcccgtatacacatggtccgggaaggggtcccaccatt-ttggtgtattgtac 39079827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 698 - 770
Target Start/End: Original strand, 42924844 - 42924918
Alignment:
Q  698 tgcactaaagctcccgcatacgcagggt-tc-gggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||||||||| ||||||||||||||| || |||||||| | ||| |||| ||||||||||||||||| |||||    
T  42924844 tgcactaaagcttccgcatacgcagggtgtctgggaagggattccatcatttttggtgtattgtacgcaacctta 42924918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 698 - 770
Target Start/End: Complemental strand, 1850760 - 1850690
Alignment:
Q  698 tgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||||||||| |||||| |||||||| | ||||| |||||||||||  ||| ||||||||||||| |||||    
T  1850760 tgcactaaagcttccgcatccgcagggtccaggaagtggtcccaccat--ttgatgtattgtacgcaccctta 1850690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 693 - 765
Target Start/End: Complemental strand, 13774991 - 13774921
Alignment:
Q  693 cccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcag 765  Q
    |||| |||||||||||||||||||||||||||| ||| ||||| |||  ||||  |||||||||||| |||||    
T  13774991 cccggtgcactaaagctcccgcatacgcagggtccggaaagggatcctgccat--ttggtgtattgtgcgcag 13774921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 706 - 746
Target Start/End: Original strand, 21542489 - 21542529
Alignment:
Q  706 agctcccgcatacgcagggttcgggaaggggtcccaccatt 746  Q
    ||||||||||||||||| || ||||||||||||||||||||    
T  21542489 agctcccgcatacgcagagtccgggaaggggtcccaccatt 21542529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 696 - 746
Target Start/End: Complemental strand, 18426162 - 18426112
Alignment:
Q  696 gatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccatt 746  Q
    ||||||||||||||| ||||||||||| |||||  |||||||| |||||||    
T  18426162 gatgcactaaagctctcgcatacgcagagttcgaaaaggggtctcaccatt 18426112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 681 - 770
Target Start/End: Original strand, 24313569 - 24313658
Alignment:
Q  681 ttaaaaaggcaacccgatgcactaaagctcccgcatacgcagggttc-gggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||| |||| |||| |||||||||||| | |||||| || ||  | ||||||||||||||||||| ||||||||||| ||||| |||||    
T  24313569 ttaaaagggcagcccggtgcactaaagctacagcatacacatggcgccgggaaggggtcccaccatt-ttggtgtattgaacgcaacctta 24313658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 681 - 770
Target Start/End: Original strand, 24355906 - 24355995
Alignment:
Q  681 ttaaaaaggcaacccgatgcactaaagctcccgcatacgcagggttc-gggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||| |||| |||| |||||||||||| | |||||| || ||  | ||||||||||||||||||| ||||||||||| ||||| |||||    
T  24355906 ttaaaagggcagcccggtgcactaaagctacagcatacacatggcgccgggaaggggtcccaccatt-ttggtgtattgaacgcaacctta 24355995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 683 - 740
Target Start/End: Original strand, 10943844 - 10943900
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtccc 740  Q
    |||| |||| |||| |||||||||||||||||||  ||||||| ||||||||||||||    
T  10943844 aaaagggcagcccggtgcactaaagctcccgcat-tgcagggtccgggaaggggtccc 10943900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 701 - 746
Target Start/End: Complemental strand, 15141998 - 15141953
Alignment:
Q  701 actaaagctcccgcatacgcagggttcgggaaggggtcccaccatt 746  Q
    ||||||||||||| ||| |||||||||  |||||||||||||||||    
T  15141998 actaaagctcccgtataagcagggttcaagaaggggtcccaccatt 15141953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 688 - 721
Target Start/End: Original strand, 29184065 - 29184098
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgca 721  Q
    ||||||||| ||||||||||||||||||||||||    
T  29184065 ggcaacccggtgcactaaagctcccgcatacgca 29184098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 693 - 770
Target Start/End: Complemental strand, 39301249 - 39301174
Alignment:
Q  693 cccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||||||| ||||| |||||| ||||| ||||||||||||||||| || |||||| ||| |||||| |||||    
T  39301249 cccggtgcactaaa-ctcccacatacggagggtccgggaaggggtcccacc-tttttggtgcattatacgcatcctta 39301174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 77; Significance: 2e-35; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 682 - 770
Target Start/End: Original strand, 13628788 - 13628876
Alignment:
Q  682 taaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  13628788 taaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagcctta 13628876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 682 - 770
Target Start/End: Original strand, 29366718 - 29366806
Alignment:
Q  682 taaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||| ||||||||  ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  29366718 taaaagggcaacccagtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagcctta 29366806  T

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Target: chr3; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 688 - 770
Target Start/End: Original strand, 353353 - 353435
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||| |||||||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  353353 ggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagcctta 353435  T

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Target: chr3; HSP #4
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 683 - 770
Target Start/End: Original strand, 40272811 - 40272896
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||    
T  40272811 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccat--ttggtgtattgtacgcagcctta 40272896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 683 - 770
Target Start/End: Original strand, 46421033 - 46421121
Alignment:
Q  683 aaaaaggcaacccgatgcact-aaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||| ||| |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  46421033 aaaagggcaaaccggtgcacttaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagcctta 46421121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 683 - 770
Target Start/End: Complemental strand, 54484849 - 54484764
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||    
T  54484849 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccat--ttggtgtattgtacgcagcctta 54484764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 683 - 770
Target Start/End: Original strand, 13730601 - 13730688
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||||||| |||||||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  13730601 aaaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacacagcctta 13730688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 683 - 770
Target Start/End: Original strand, 49013472 - 49013559
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||||||| ||||||||||||||||| || || |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  49013472 aaaagggcaacccggtgcactaaagctcccgcgtatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagcctta 49013559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 688 - 770
Target Start/End: Original strand, 45786218 - 45786300
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||| |||||||||||||| |||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  45786218 ggcaacccggtgcactaaagctccagcattcgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagcctta 45786300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 691 - 770
Target Start/End: Complemental strand, 14987109 - 14987030
Alignment:
Q  691 aacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||| |||||||||||||||||||| ||| ||| |||||| |||||||||||||||||||||||||||||||||||||    
T  14987109 aacccggtgcactaaagctcccgcatatgcaaggtccgggaatgggtcccaccattattggtgtattgtacgcagcctta 14987030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 688 - 770
Target Start/End: Original strand, 10795427 - 10795509
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||| | |||||| ||||||||||||||||||||| | |||||||||||||||||| |||||||||||||||||||||||    
T  10795427 ggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagcctta 10795509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 683 - 770
Target Start/End: Original strand, 52926218 - 52926303
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||||||| ||| |||||||||||||||||||||||| |||||||| ||||||||||  |||||||||||||||||||||||    
T  52926218 aaaagggcaacccggtgcgctaaagctcccgcatacgcagggtccgggaaggtgtcccaccat--ttggtgtattgtacgcagcctta 52926303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 703 - 770
Target Start/End: Original strand, 8247706 - 8247773
Alignment:
Q  703 taaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||    
T  8247706 taaagctcccgcatacgcagggtccgggaaggagtcccaccattattggtgtattgtacgcaacctta 8247773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 688 - 770
Target Start/End: Complemental strand, 22609918 - 22609838
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||| |||||| ||||||||||||||||| ||| |||||||||||||||||||  |||||||||||||||||||||||    
T  22609918 ggcaacccggtgcactgaagctcccgcatacgcaaggtccgggaaggggtcccaccat--ttggtgtattgtacgcagcctta 22609838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 698 - 764
Target Start/End: Original strand, 829456 - 829521
Alignment:
Q  698 tgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgca 764  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  829456 tgcactaaagctcctgcatacgcagggttcgggaaggggtcccaccatt-ttggtgtattgtacgca 829521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 683 - 770
Target Start/End: Complemental strand, 1217246 - 1217161
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||||||| ||||||| |||||||||||| ||||||| |||||||||||||| ||||  |||||||||||||||||||||||    
T  1217246 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccgccat--ttggtgtattgtacgcagcctta 1217161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 683 - 770
Target Start/End: Complemental strand, 15797378 - 15797293
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||||||| ||||||| ||||||| |||| ||||||| |||||||||||||||||||  |||||||||||||||||||||||    
T  15797378 aaaagggcaacccggtgcactagagctcccacatatgcagggtccgggaaggggtcccaccat--ttggtgtattgtacgcagcctta 15797293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 683 - 770
Target Start/End: Complemental strand, 26869864 - 26869779
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||||||| ||||| |||||||||||||||||| ||| ||| |||||||||||||||  |||||||||||||||||||||||    
T  26869864 aaaagggcaacccggtgcaccaaagctcccgcatacgcatggtccggcaaggggtcccaccat--ttggtgtattgtacgcagcctta 26869779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 683 - 770
Target Start/End: Original strand, 34771363 - 34771448
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| |||| |||| ||||||| |||||||||||| ||||||| |||||||||||||||||||  |||||||||||||||||||||||    
T  34771363 aaaagggcagcccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccat--ttggtgtattgtacgcagcctta 34771448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 683 - 758
Target Start/End: Original strand, 5173718 - 5173793
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattg 758  Q
    |||| ||||||||| |||||||||||||||||||||||| ||| |||||||||| ||||||||| |||||||||||    
T  5173718 aaaagggcaacccggtgcactaaagctcccgcatacgcaaggtccgggaaggggccccaccatttttggtgtattg 5173793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 688 - 770
Target Start/End: Original strand, 22122921 - 22123001
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||| ||||||| ||||| |||||| ||||||| |||||||||||||||||||  |||||||||||||||||||||||    
T  22122921 ggcaacccggtgcactagagctctcgcatatgcagggtccgggaaggggtcccaccat--ttggtgtattgtacgcagcctta 22123001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 688 - 770
Target Start/End: Complemental strand, 31593000 - 31592920
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||| ||||||| |||||||||||| ||||||| |||||||| ||||||||||  |||||||||||||||||||||||    
T  31593000 ggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggagtcccaccat--ttggtgtattgtacgcagcctta 31592920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 688 - 770
Target Start/End: Complemental strand, 39203667 - 39203587
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||| |||||||||||||||||||| ||| ||| |||||||||||||||||||  ||||||||||||||||| |||||    
T  39203667 ggcaacccggtgcactaaagctcccgcatatgcaaggtccgggaaggggtcccaccat--ttggtgtattgtacgcaacctta 39203587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 682 - 767
Target Start/End: Original strand, 25517168 - 25517251
Alignment:
Q  682 taaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcc 767  Q
    ||||| ||||||||| |||||||||||||| ||||||||||| | |||||||||||||||||||  || |||||||||||||||||    
T  25517168 taaaagggcaacccggtgcactaaagctccagcatacgcaggatccgggaaggggtcccaccat--tttgtgtattgtacgcagcc 25517251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 682 - 770
Target Start/End: Complemental strand, 16735599 - 16735513
Alignment:
Q  682 taaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||| ||||||||  |||||| ||||| |||||||||||| || |||||||||||||||||||  |||||||||||||||||||||||    
T  16735599 taaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccat--ttggtgtattgtacgcagcctta 16735513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 698 - 770
Target Start/End: Complemental strand, 26573270 - 26573200
Alignment:
Q  698 tgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||||||| |||||||||||||| ||||| ||||||||||||  ||||||||||||||||||||||||    
T  26573270 tgcactaaagctcacgcatacgcagggtccgggatggggtcccacca--attggtgtattgtacgcagcctta 26573200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 698 - 770
Target Start/End: Original strand, 45948852 - 45948922
Alignment:
Q  698 tgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||||||||||||||||||||||||| || |||||||||||||||  |||||||||||||| |||||||||    
T  45948852 tgcactaaagctcccgcatacgcagggtccgagaaggggtcccacca--attggtgtattgtatgcagcctta 45948922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 701 - 770
Target Start/End: Original strand, 54374362 - 54374430
Alignment:
Q  701 actaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||| |||||| ||||||||||||||||    
T  54374362 actaaagctcccgcatatgcagggtccgggaaggggtcccaccatt-ttggtggattgtacgcagcctta 54374430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 683 - 770
Target Start/End: Complemental strand, 516570 - 516482
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccacca-ttattggtgtattgtacgcagcctta 770  Q
    |||| ||||||||| ||||||||||||||||||||||||||||  ||||||||||||| ||| || ||||| |||||| ||||||||||    
T  516570 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtcggggaaggggtcccgccattttttggtttattgtgcgcagcctta 516482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 698 - 770
Target Start/End: Original strand, 34420657 - 34420728
Alignment:
Q  698 tgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||||||||| |||||||| ||| |||||||||||||||||||| ||||||||| |||||||||||||    
T  34420657 tgcactaaagctcccacatacgcaaggtccgggaaggggtcccaccatt-ttggtgtatggtacgcagcctta 34420728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 683 - 770
Target Start/End: Original strand, 53996564 - 53996650
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| |||| |||| ||||||||||||||| ||||||||| ||  ||||||||||||||||||| ||||||||||||| |||||||||    
T  53996564 aaaagggcagcccggtgcactaaagctcccacatacgcagtgtcagggaaggggtcccaccatt-ttggtgtattgtaagcagcctta 53996650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 698 - 770
Target Start/End: Original strand, 6411836 - 6411906
Alignment:
Q  698 tgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||||||||||||||||||||| |||  |||||||||||||| |||  |||||||||||||||||||||||    
T  6411836 tgcactaaagctcccgcatacgcaaggtctgggaaggggtcccatcat--ttggtgtattgtacgcagcctta 6411906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 701 - 770
Target Start/End: Complemental strand, 9607345 - 9607276
Alignment:
Q  701 actaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||||||||||| || ||||  |||||||||||||| ||||||||||||||| ||||||||||||    
T  9607345 actaaagctcccgcatatgcggggtctgggaaggggtcccaacattattggtgtattctacgcagcctta 9607276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 683 - 746
Target Start/End: Original strand, 24851300 - 24851363
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccatt 746  Q
    |||| ||||||||| |||||||||||||||||||| ||||| | ||||||||||||||||||||    
T  24851300 aaaagggcaacccggtgcactaaagctcccgcatatgcaggatccgggaaggggtcccaccatt 24851363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 702 - 769
Target Start/End: Complemental strand, 25944609 - 25944543
Alignment:
Q  702 ctaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctt 769  Q
    ||||||||||| ||||||||||||  ||||||||||||||||||| |||||||||||||| |||||||    
T  25944609 ctaaagctcccacatacgcagggtcagggaaggggtcccaccatt-ttggtgtattgtactcagcctt 25944543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 682 - 744
Target Start/End: Complemental strand, 30452954 - 30452892
Alignment:
Q  682 taaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccacca 744  Q
    ||||| ||||||||| ||||||| |||||||||||| ||||||| ||||||||||||||||||    
T  30452954 taaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca 30452892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 700 - 770
Target Start/End: Complemental strand, 33926224 - 33926155
Alignment:
Q  700 cactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||||| |||||| ||||||| | ||||||||||||||||||| ||||||||||||| ||||||||    
T  33926224 cactaaagctctcgcatatgcagggtccaggaaggggtcccaccatta-tggtgtattgtacacagcctta 33926155  T

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Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 682 - 739
Target Start/End: Original strand, 10484614 - 10484671
Alignment:
Q  682 taaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcc 739  Q
    ||||| ||||||||| |||||||||||||||||||||||||||| | |||||||||||    
T  10484614 taaaagggcaacccggtgcactaaagctcccgcatacgcagggtccaggaaggggtcc 10484671  T

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Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 682 - 770
Target Start/End: Original strand, 12914033 - 12914119
Alignment:
Q  682 taaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||| ||||||||| |||| | ||||||||||||| |||||||  ||||||||||| ||||||  |||||||||||||||| ||||||    
T  12914033 taaaagggcaacccggtgcattgaagctcccgcatatgcagggtctgggaaggggtctcaccat--ttggtgtattgtacgccgcctta 12914119  T

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Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 683 - 770
Target Start/End: Complemental strand, 7943148 - 7943063
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||||||||||  |||||||||||||||||||||||| |||  || ||||| |||||||||  ||| |||||||||||||| ||||    
T  7943148 aaaaaggcaacccagtgcactaaagctcccgcatacgcatggtctggaaagggatcccaccat--ttgatgtattgtacgcagtctta 7943063  T

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Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 683 - 746
Target Start/End: Original strand, 44403554 - 44403617
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccatt 746  Q
    ||||||||| |||| |||||||||||| | ||||||| ||||| ||||||||||||||||||||    
T  44403554 aaaaaggcagcccggtgcactaaagcttcagcatacgtagggtccgggaaggggtcccaccatt 44403617  T

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Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 683 - 729
Target Start/End: Complemental strand, 40390399 - 40390353
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgg 729  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||||    
T  40390399 aaaagggcaacccggtgcactaaagctcccgcatacgcagggttcgg 40390353  T

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Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 704 - 770
Target Start/End: Original strand, 45139497 - 45139562
Alignment:
Q  704 aaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| |||||||||||||||  | ||||||||||||||||||| ||||||||||||| |||||||||    
T  45139497 aaagttcccgcatacgcaggtct-gggaaggggtcccaccatttttggtgtattgtatgcagcctta 45139562  T

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Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 684 - 770
Target Start/End: Complemental strand, 55401334 - 55401249
Alignment:
Q  684 aaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||||| |||| ||||  |||||||||||||||| | ||| || ||||||||||||||||| |||||||||| ||||||| ||||    
T  55401334 aaaaggcagcccggtgcaaaaaagctcccgcatacggaaggtccgagaaggggtcccaccatt-ttggtgtattatacgcagtctta 55401249  T

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Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 683 - 732
Target Start/End: Complemental strand, 47624257 - 47624208
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaa 732  Q
    |||| ||||||||| |||||||||||||||||||||||||||| ||||||    
T  47624257 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaa 47624208  T

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Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 703 - 770
Target Start/End: Complemental strand, 9276401 - 9276337
Alignment:
Q  703 taaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||| ||||||||||||||||| |||||| |||| |||||||  |||||||||||||||||||||||    
T  9276401 taaagttcccgcatacgcagggtccgggaaagggt-ccaccat--ttggtgtattgtacgcagcctta 9276337  T

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Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 688 - 744
Target Start/End: Original strand, 14266376 - 14266431
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccacca 744  Q
    ||||||||  |||||||||||||||||||||||||||||| |||| |||||||||||    
T  14266376 ggcaacccagtgcactaaagctcccgcatacgcagggttcaggaa-gggtcccacca 14266431  T

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Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 685 - 760
Target Start/End: Original strand, 43114869 - 43114942
Alignment:
Q  685 aaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgta 760  Q
    |||||||| || |||||||||||||||||||||||||||| ||  | | ||||||||||||  |||||||||||||    
T  43114869 aaaggcaatccaatgcactaaagctcccgcatacgcaggggtccaggaagggtcccaccat--ttggtgtattgta 43114942  T

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Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 715 - 770
Target Start/End: Complemental strand, 47624167 - 47624114
Alignment:
Q  715 atacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| |||||| |||||||||||||||||||  |||||||||||||||||||||||    
T  47624167 atacacagggtccgggaaggggtcccaccat--ttggtgtattgtacgcagcctta 47624114  T

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Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 682 - 763
Target Start/End: Complemental strand, 26292490 - 26292410
Alignment:
Q  682 taaaaagg-caacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgc 763  Q
    |||||||| ||||||| ||||||| || ||||||||| ||||||||||||||||| ||||| |||  ||||||||| ||||||    
T  26292490 taaaaaggacaacccggtgcactagagttcccgcatatgcagggttcgggaagggatcccatcat--ttggtgtatcgtacgc 26292410  T

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Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 682 - 725
Target Start/End: Original strand, 54032569 - 54032612
Alignment:
Q  682 taaaaaggcaacccgatgcactaaagctcccgcatacgcagggt 725  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||    
T  54032569 taaaagggcaacccggtgcactaaagctcccgcatacgcagggt 54032612  T

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Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 683 - 725
Target Start/End: Original strand, 4495675 - 4495717
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggt 725  Q
    |||| ||||||||| ||||||||||||||||||||||||||||    
T  4495675 aaaagggcaacccggtgcactaaagctcccgcatacgcagggt 4495717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 688 - 746
Target Start/End: Complemental strand, 35418057 - 35417999
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccatt 746  Q
    |||| |||||||||||||||||| |||||  || |||| ||||||||||||||||||||    
T  35418057 ggcagcccgatgcactaaagctctcgcatttgcggggtccgggaaggggtcccaccatt 35417999  T

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Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 688 - 770
Target Start/End: Complemental strand, 19731155 - 19731075
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| |||| |||||||||||||| |||||| ||| ||  ||||| |||||||||||  || ||||||||||||||| |||||    
T  19731155 ggcagcccggtgcactaaagctcctgcatacacagagtctgggaaagggtcccacca--ataggtgtattgtacgcaacctta 19731075  T

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Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 696 - 746
Target Start/End: Original strand, 46169979 - 46170029
Alignment:
Q  696 gatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccatt 746  Q
    |||||||| |||||||| |||| ||||||| ||||||||||||| ||||||    
T  46169979 gatgcactgaagctcccacatatgcagggtccgggaaggggtcctaccatt 46170029  T

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Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 681 - 746
Target Start/End: Complemental strand, 40968678 - 40968613
Alignment:
Q  681 ttaaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccatt 746  Q
    |||||| |||| | ||||||||||||||||||||||| | |||||   |||||||||| |||||||    
T  40968678 ttaaaagggcagctcgatgcactaaagctcccgcatatgtagggtctaggaaggggtctcaccatt 40968613  T

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Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 683 - 763
Target Start/End: Original strand, 50624952 - 50625030
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgc 763  Q
    |||| |||| |||| ||||||||||||||| | |||||||||  | |||||| |||||||||  | |||||||||||||||    
T  50624952 aaaagggcagcccggtgcactaaagctcccacttacgcagggcccaggaaggcgtcccacca--aatggtgtattgtacgc 50625030  T

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Target: chr6 (Bit Score: 76; Significance: 1e-34; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 683 - 770
Target Start/End: Original strand, 29355854 - 29355941
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  29355854 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagcctta 29355941  T

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Target: chr6; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 683 - 770
Target Start/End: Original strand, 12221913 - 12222001
Alignment:
Q  683 aaaaaggcaacccgatgcactaaa-gctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  12221913 aaaagggcaacccggtgcactaaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagcctta 12222001  T

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Target: chr6; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 683 - 770
Target Start/End: Complemental strand, 9161260 - 9161173
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||||| | |||||||||||| ||||||||||||||| || ||||||||||||||||||||| |||||||||||||||||||    
T  9161260 aaaagggcaacctggtgcactaaagcttccgcatacgcagggtccgagaaggggtcccaccattattgatgtattgtacgcagcctta 9161173  T

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Target: chr6; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 681 - 770
Target Start/End: Original strand, 1354754 - 1354841
Alignment:
Q  681 ttaaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||| ||||||||| ||||||| |||||||||||| ||||||| |||||||||||||||||||  |||||||||||||||||||||||    
T  1354754 ttaaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccat--ttggtgtattgtacgcagcctta 1354841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 683 - 764
Target Start/End: Complemental strand, 12892145 - 12892064
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgca 764  Q
    |||| ||||||||| |||||||||||||||||||| || |||| ||||||||||||||||||||||||||||||| ||||||    
T  12892145 aaaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattatacgca 12892064  T

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Target: chr6; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 683 - 770
Target Start/End: Complemental strand, 1347098 - 1347013
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||||||| ||||||| |||||||||||| ||||||| |||||||||||||||||||  |||||||||||||||||||||||    
T  1347098 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccat--ttggtgtattgtacgcagcctta 1347013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 681 - 765
Target Start/End: Complemental strand, 12886051 - 12885967
Alignment:
Q  681 ttaaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcag 765  Q
    |||||| ||||||||| ||||||||||||||| ||||||||||||  ||||||||||||||||||| || |||||||||||||||    
T  12886051 ttaaaagggcaacccggtgcactaaagctcccacatacgcagggtctgggaaggggtcccaccattttttgtgtattgtacgcag 12885967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 683 - 770
Target Start/End: Original strand, 2166409 - 2166496
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||||||| |||||||||||||||| |||   ||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  2166409 aaaagggcaacccggtgcactaaagctcccgaatatatagggtccgggaaggggtcccaccattattggtgtattgtacgcaacctta 2166496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 683 - 770
Target Start/End: Original strand, 2178042 - 2178129
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||||||| |||||||||||||||| |||   ||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  2178042 aaaagggcaacccggtgcactaaagctcccgaatatatagggtccgggaaggggtcccaccattattggtgtattgtacgcaacctta 2178129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 688 - 758
Target Start/End: Original strand, 14975094 - 14975164
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattg 758  Q
    ||||||||| ||||||||| |||||||||| || |||||||||||||||||||||||||||||||||||||    
T  14975094 ggcaacccggtgcactaaaactcccgcatatgcggggttcgggaaggggtcccaccattattggtgtattg 14975164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 683 - 747
Target Start/End: Complemental strand, 6808531 - 6808467
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccatta 747  Q
    |||| ||||||||| ||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  6808531 aaaagggcaacccggtgcactaaagctcccgcatacacagggtccgggaaggggtcccaccatta 6808467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 698 - 770
Target Start/End: Original strand, 7947385 - 7947456
Alignment:
Q  698 tgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||||||||| |||||||| ||| |||||||||| ||||||||| |||||||||||||||||||||||    
T  7947385 tgcactaaagctcccacatacgcaaggtccgggaagggggcccaccatt-ttggtgtattgtacgcagcctta 7947456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 683 - 770
Target Start/End: Complemental strand, 26097294 - 26097209
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||||||| ||||||| |||||||||||| ||||||| ||||||||||||||  |||  |||||||||||||||||||||||    
T  26097294 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccttcat--ttggtgtattgtacgcagcctta 26097209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 691 - 765
Target Start/End: Original strand, 3815084 - 3815156
Alignment:
Q  691 aacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcag 765  Q
    |||||| |||||||||||| ||||||||| |||||||||||| ||||||||||||  ||||||||||||||||||    
T  3815084 aacccggtgcactaaagcttccgcatacgtagggttcgggaaagggtcccaccat--ttggtgtattgtacgcag 3815156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 683 - 765
Target Start/End: Original strand, 3116128 - 3116210
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcag 765  Q
    |||| ||||| ||| || ||||||||||||||||||||| ||| || ||||||||||||||||| |||||||||||| |||||    
T  3116128 aaaagggcaatccggtgtactaaagctcccgcatacgcaaggtccgagaaggggtcccaccatttttggtgtattgtgcgcag 3116210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 683 - 758
Target Start/End: Complemental strand, 13267861 - 13267788
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattg 758  Q
    |||| ||||||||| |||||| ||||||||||||||||||||| | |||||||||||||||||  |||||||||||    
T  13267861 aaaagggcaacccggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccat--ttggtgtattg 13267788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 683 - 770
Target Start/End: Complemental strand, 25557859 - 25557774
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||||||| ||||||| |||||||||||| ||||||| ||||||||||| ||  |||  |||||||||||||||||||||||    
T  25557859 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggttccttcat--ttggtgtattgtacgcagcctta 25557774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 682 - 764
Target Start/End: Original strand, 23930125 - 23930205
Alignment:
Q  682 taaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgca 764  Q
    ||||| |||||| || |||||||||||||||||||| ||||||| || ||||||||||||||||   ||||||||||||||||    
T  23930125 taaaagggcaactcggtgcactaaagctcccgcataagcagggtccgtgaaggggtcccaccat--ctggtgtattgtacgca 23930205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 698 - 770
Target Start/End: Original strand, 2755434 - 2755508
Alignment:
Q  698 tgcactaaagctcccgc--atacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||||||||||||||  ||| ||||| || |||||||  |||||||||| |||||||||||||||||||||||    
T  2755434 tgcactaaagctcccgcgcatatgcaggatttgggaaggactcccaccatttttggtgtattgtacgcagcctta 2755508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 688 - 770
Target Start/End: Complemental strand, 17432479 - 17432397
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||| ||||||||||||||||||| | |||| | ||||||  |||| ||||||| || ||||||||||| ||||||||    
T  17432479 ggcaacccggtgcactaaagctcccgcatgcacaggatccgggaaaaggtctcaccatttttagtgtattgtacacagcctta 17432397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 700 - 746
Target Start/End: Complemental strand, 24097696 - 24097650
Alignment:
Q  700 cactaaagctcccgcatacgcagggttcgggaaggggtcccaccatt 746  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||    
T  24097696 cactaaagcttccgcatacgcagggtccgggaaggggtcccaccatt 24097650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 683 - 737
Target Start/End: Original strand, 30786373 - 30786427
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggt 737  Q
    |||||||||||||| |||||||||||||||||||||||| ||| | |||||||||    
T  30786373 aaaaaggcaacccggtgcactaaagctcccgcatacgcacggtccaggaaggggt 30786427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 701 - 770
Target Start/End: Complemental strand, 32579543 - 32579476
Alignment:
Q  701 actaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||||||||||| |||||||  ||||||||||||||||||  |||| ||||||||||||| ||||    
T  32579543 actaaagctcccgcatatgcagggtctgggaaggggtcccaccat--ttggggtattgtacgcaggctta 32579476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 688 - 763
Target Start/End: Original strand, 383764 - 383837
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgc 763  Q
    ||||||||| || ||| |||||||||||||||||||||  | ||||||||||||| ||  ||||||||||||||||    
T  383764 ggcaacccggtggactgaagctcccgcatacgcagggtctgagaaggggtcccacaat--ttggtgtattgtacgc 383837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 688 - 744
Target Start/End: Original strand, 10734909 - 10734965
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccacca 744  Q
    |||| |||| || ||||||||||||||||||||||||| |||||||||| |||||||    
T  10734909 ggcagcccggtggactaaagctcccgcatacgcagggtccgggaagggggcccacca 10734965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 702 - 770
Target Start/End: Complemental strand, 24734760 - 24734693
Alignment:
Q  702 ctaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||||||| ||||||||||| | ||||||||||||||||| || ||| ||||||||||||| |||||    
T  24734760 ctaaagctcc-gcatacgcaggatccgggaaggggtcccaccttttttgttgtattgtacgcaacctta 24734693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 690 - 746
Target Start/End: Complemental strand, 34850665 - 34850609
Alignment:
Q  690 caacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccatt 746  Q
    ||||||||||||||||||||||   ||||||||| ||||||||||||| ||||||||    
T  34850665 caacccgatgcactaaagctcctatatacgcaggattcgggaaggggttccaccatt 34850609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 701 - 744
Target Start/End: Complemental strand, 11395879 - 11395836
Alignment:
Q  701 actaaagctcccgcatacgcagggttcgggaaggggtcccacca 744  Q
    ||||||||||||||||||||||| | ||||||||||||||||||    
T  11395879 actaaagctcccgcatacgcaggatccgggaaggggtcccacca 11395836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 700 - 759
Target Start/End: Complemental strand, 11849173 - 11849115
Alignment:
Q  700 cactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgt 759  Q
    |||||||| || | ||||||||| ||||||||||||||||||||||| ||||||||||||    
T  11849173 cactaaagatctcacatacgcagagttcgggaaggggtcccaccatt-ttggtgtattgt 11849115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 693 - 759
Target Start/End: Complemental strand, 19340954 - 19340889
Alignment:
Q  693 cccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgt 759  Q
    |||| |||||||||||| |||||||||| |||| | ||||||||||||| |||| ||||||||||||    
T  19340954 cccgttgcactaaagcttccgcatacgccgggtccaggaaggggtcccatcatt-ttggtgtattgt 19340889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 698 - 770
Target Start/End: Complemental strand, 33138954 - 33138884
Alignment:
Q  698 tgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||||||||| | |||||| |||||| ||| || ||||||||||||  |||||||||||||||| ||||||    
T  33138954 tgcactaaagctactgcatacacagggtccggaaaagggtcccaccat--ttggtgtattgtacgcggcctta 33138884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 722 - 770
Target Start/End: Complemental strand, 6024332 - 6024284
Alignment:
Q  722 gggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||||| ||||||| ||||||||||||||||||||||| ||||    
T  6024332 gggtccgggaagaggtcccatcattattggtgtattgtacgcagtctta 6024284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 698 - 746
Target Start/End: Original strand, 15866053 - 15866101
Alignment:
Q  698 tgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccatt 746  Q
    ||||||| || ||||||| ||||||||| ||||||||||||||||||||    
T  15866053 tgcactatagatcccgcaaacgcagggtccgggaaggggtcccaccatt 15866101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 683 - 746
Target Start/End: Original strand, 9671083 - 9671146
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccatt 746  Q
    |||| |||| ||||||||| ||||||||||| ||  ||||||||||| ||||||||| ||||||    
T  9671083 aaaagggcagcccgatgcattaaagctcccgtatttgcagggttcggaaaggggtcctaccatt 9671146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 698 - 764
Target Start/End: Original strand, 23240838 - 23240902
Alignment:
Q  698 tgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgca 764  Q
    ||||||||||||||||||||||||  || |  |||||||||||||||  |||||| |||||||||||    
T  23240838 tgcactaaagctcccgcatacgcattgtcctagaaggggtcccacca--attggtatattgtacgca 23240902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 688 - 769
Target Start/End: Complemental strand, 12889558 - 12889478
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctt 769  Q
    |||| |||||||||||||||||||| || ||  ||||| ||| ||||||||||| | || | ||||||||||| ||||||||    
T  12889558 ggcagcccgatgcactaaagctcccacacacagagggtccggaaaggggtcccatcgtt-taggtgtattgtatgcagcctt 12889478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 735 - 764
Target Start/End: Original strand, 20908877 - 20908906
Alignment:
Q  735 ggtcccaccattattggtgtattgtacgca 764  Q
    ||||||||||||||||||||||||||||||    
T  20908877 ggtcccaccattattggtgtattgtacgca 20908906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 735 - 764
Target Start/End: Original strand, 20923325 - 20923354
Alignment:
Q  735 ggtcccaccattattggtgtattgtacgca 764  Q
    ||||||||||||||||||||||||||||||    
T  20923325 ggtcccaccattattggtgtattgtacgca 20923354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 73; Significance: 6e-33; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 682 - 770
Target Start/End: Original strand, 39460992 - 39461080
Alignment:
Q  682 taaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  39460992 taaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtctcaccattattggtgtattgtacgcagcctta 39461080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 690 - 770
Target Start/End: Original strand, 20284075 - 20284155
Alignment:
Q  690 caacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  20284075 caacccggtgcactaaaactcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagcctta 20284155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 690 - 770
Target Start/End: Original strand, 21070703 - 21070783
Alignment:
Q  690 caacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  21070703 caacccggtgcactaaaactcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagcctta 21070783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 683 - 767
Target Start/End: Complemental strand, 25250660 - 25250576
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcc 767  Q
    |||| ||||||||| ||||||||| |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  25250660 aaaagggcaacccggtgcactaaatctcccgcatatgcggggttcgggaaggggtcccaccattattggtgtattgtacgcagcc 25250576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 683 - 770
Target Start/End: Original strand, 28817625 - 28817710
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  | |||||||||||||||||||||    
T  28817625 aaaagggcaacccgatgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccat--tgggtgtattgtacgcagcctta 28817710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 691 - 770
Target Start/End: Original strand, 7136534 - 7136613
Alignment:
Q  691 aacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||| |||||||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  7136534 aacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagcctta 7136613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 683 - 770
Target Start/End: Complemental strand, 20870061 - 20869974
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||||||| |||||||||||||||||||| || |||| | ||||||||||||||||||||||||||||||||||||||||||    
T  20870061 aaaagggcaacccggtgcactaaagctcccgcatatgcggggtcctggaaggggtcccaccattattggtgtattgtacgcagcctta 20869974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 683 - 770
Target Start/End: Complemental strand, 6760960 - 6760873
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||||||| |||||||||||||||||||| || |||| || ||||||||||||||||||||||||||||||||| |||||||    
T  6760960 aaaagggcaacccggtgcactaaagctcccgcatatgcggggtccgagaaggggtcccaccattattggtgtattgtacgaagcctta 6760873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 688 - 770
Target Start/End: Original strand, 17250880 - 17250961
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||| ||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  17250880 ggcaacccg-tgcactaaagctccttcatacgcagggttcgggaaagggtcccaccattattggtgtattgtacgctgcctta 17250961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 682 - 770
Target Start/End: Complemental strand, 36720933 - 36720847
Alignment:
Q  682 taaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||| ||||||| | |||||||||||| ||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||    
T  36720933 taaaagggcaaccgggtgcactaaagcttccgcatacgcagggtccgggaaggggtcccaccat--ttggtgtattgtacgcagcctta 36720847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 690 - 770
Target Start/End: Complemental strand, 44530278 - 44530200
Alignment:
Q  690 caacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||| |||||||||||||||||||||||||||| | |||||||||||||||||  |||||||||||||||||||||||    
T  44530278 caacccggtgcactaaagctcccgcatacgcagggtccaggaaggggtcccaccat--ttggtgtattgtacgcagcctta 44530200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 690 - 770
Target Start/End: Complemental strand, 16225150 - 16225070
Alignment:
Q  690 caacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||| |||||||||||||||||||| || |||| ||||||||| ||||||||||||||||||||||||||||| ||||    
T  16225150 caacccggtgcactaaagctcccgcatatgcggggtccgggaagggatcccaccattattggtgtattgtacgcagtctta 16225070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 682 - 770
Target Start/End: Complemental strand, 26954272 - 26954184
Alignment:
Q  682 taaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||| ||||||||  |||||||||||||||||||| ||  |||  |||||||||||||||||||||||||||||||||||||||||||    
T  26954272 taaaagggcaacccagtgcactaaagctcccgcatatgcgaggtctgggaaggggtcccaccattattggtgtattgtacgcagcctta 26954184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 683 - 770
Target Start/End: Complemental strand, 35261815 - 35261730
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||||||| |||||||||||||||||||||||||||| | |||||||||||||||||  ||||||||||||||||| |||||    
T  35261815 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccaggaaggggtcccaccat--ttggtgtattgtacgcaacctta 35261730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 688 - 770
Target Start/End: Complemental strand, 13160832 - 13160752
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||||||  ||||| ||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||    
T  13160832 ggcaacccggcgcactgaagctcccgcatacgcagggtccgggaaggggtcccaccat--ttggtgtattgtacgcagcctta 13160752  T

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Target: chr8; HSP #16
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 688 - 770
Target Start/End: Complemental strand, 45071395 - 45071315
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||| |||||| ||||||||||||||||| ||| |||||||||||||||||||  |||||||||||||||||||||||    
T  45071395 ggcaacccggtgcactgaagctcccgcatacgcaaggtccgggaaggggtcccaccat--ttggtgtattgtacgcagcctta 45071315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 682 - 770
Target Start/End: Complemental strand, 12626027 - 12625941
Alignment:
Q  682 taaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||| ||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||  ||||||||||||| |||| ||||    
T  12626027 taaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggagggggtcccaccat--ttggtgtattgtatgcagtctta 12625941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 698 - 770
Target Start/End: Complemental strand, 29877215 - 29877145
Alignment:
Q  698 tgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||    
T  29877215 tgcactaacgctcccgcatacgcagggtccgggaaggggtcccaccat--ttggtgtattgtacgcagcctta 29877145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 691 - 770
Target Start/End: Original strand, 12670257 - 12670334
Alignment:
Q  691 aacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||| ||||||| |||||||||||| ||||||| |||||||||||||||||||  |||||||||||||||||||||||    
T  12670257 aacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccat--ttggtgtattgtacgcagcctta 12670334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 683 - 770
Target Start/End: Original strand, 30454096 - 30454181
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||||||| ||||||| |||||||||||| ||||||| |||||||||||||||||||  ||||||||| |||||||||||||    
T  30454096 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccat--ttggtgtatcgtacgcagcctta 30454181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 689 - 770
Target Start/End: Complemental strand, 5689761 - 5689682
Alignment:
Q  689 gcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||| ||||||||||||||| |||||||| ||||||||||||||| |||||||  |||||||||||||||||||||||    
T  5689761 gcaaaccggtgcactaaagctcccacatacgcatggttcgggaaggggttccaccat--ttggtgtattgtacgcagcctta 5689682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 690 - 744
Target Start/End: Complemental strand, 27508039 - 27507985
Alignment:
Q  690 caacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccacca 744  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  27508039 caacccggtgcactaaagctcccgcatacgcagggttcgggaaggggtcccacca 27507985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 689 - 770
Target Start/End: Original strand, 29521690 - 29521769
Alignment:
Q  689 gcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||||| ||||||||||||||||||||||||||||  |||| ||| |||||||||  |||||||||||||||||||||||    
T  29521690 gcaacccggtgcactaaagctcccgcatacgcagggtctgggatgggttcccaccat--ttggtgtattgtacgcagcctta 29521769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 683 - 770
Target Start/End: Original strand, 8897763 - 8897848
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||||| | |||| ||||||||||||||| ||||||| |||||||||||||||||||  ||||||||||||||| |||||||    
T  8897763 aaaagggcaaccgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccaccat--ttggtgtattgtacgtagcctta 8897848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 683 - 770
Target Start/End: Complemental strand, 10857965 - 10857880
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||||||| |||||||||||||||||||||||| ||| | ||||| ||||||||||  ||||||||||||| ||||||||||    
T  10857965 aaaagggcaacccggtgcactaaagctcccgcatacgcaaggtccaggaagtggtcccacca--attggtgtattgtgcgcagcctta 10857880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 682 - 769
Target Start/End: Complemental strand, 31457309 - 31457224
Alignment:
Q  682 taaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctt 769  Q
    ||||| ||||| ||| ||||||| ||||||||||||||||||||| |||||||||||| |||||  ||| ||||||||||||||||||    
T  31457309 taaaagggcaatccggtgcactagagctcccgcatacgcagggtttgggaaggggtcctaccat--ttgatgtattgtacgcagcctt 31457224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 698 - 770
Target Start/End: Original strand, 44781518 - 44781590
Alignment:
Q  698 tgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||||||||||||||||||||||  |||| ||||||||| |||| |||||||||||||| ||||||||    
T  44781518 tgcactaaagctcccgcatacgcagggtctgggacggggtcccaacatttttggtgtattgtacacagcctta 44781590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 682 - 764
Target Start/End: Complemental strand, 16013594 - 16013511
Alignment:
Q  682 taaaaagg-caacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgca 764  Q
    |||||||| ||||||| |||||||||||||||||||| |||||||  ||||||||||| ||||||| || ||||||||||||||    
T  16013594 taaaaaggacaacccggtgcactaaagctcccgcataggcagggtctgggaaggggtcgcaccatttttagtgtattgtacgca 16013511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 688 - 770
Target Start/End: Complemental strand, 17823707 - 17823627
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||| |||||||||||||| ||||| ||||||||||||||||||| |||||||  |||||||||| ||||||| ||||    
T  17823707 ggcaacccggtgcactaaagctcctgcatatgcagggttcgggaaggggttccaccat--ttggtgtattttacgcagtctta 17823627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 683 - 760
Target Start/End: Complemental strand, 26102653 - 26102578
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgta 760  Q
    |||| ||||||||| ||||||| |||||||||||| ||||||| |||||||||||||||||||  |||||||||||||    
T  26102653 aaaagggcaacccggtgcactagagctcccgcataagcagggtccgggaaggggtcccaccat--ttggtgtattgta 26102578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 693 - 769
Target Start/End: Original strand, 8483947 - 8484021
Alignment:
Q  693 cccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctt 769  Q
    |||| ||| ||||||||||||||||||||||||  |||| ||||||||||||  |||||||||||||||||||||||    
T  8483947 cccggtgccctaaagctcccgcatacgcagggtctgggatggggtcccacca--attggtgtattgtacgcagcctt 8484021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 688 - 769
Target Start/End: Original strand, 42083702 - 42083782
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctt 769  Q
    |||| ||| |||||||||||||||| | ||| ||||||||||||||||||||||||||| ||||| || |||||||||||||    
T  42083702 ggcagcccaatgcactaaagctcccacgtacacagggttcgggaaggggtcccaccatt-ttggtatactgtacgcagcctt 42083782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 683 - 770
Target Start/End: Original strand, 5135289 - 5135373
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| |||| |||| ||||| |||||||| ||||||||||||| |||||||||||||||||||  |||||||||||||| ||||||||    
T  5135289 aaaagggcagcccggtgcac-aaagctcctgcatacgcagggtccgggaaggggtcccaccat--ttggtgtattgtacacagcctta 5135373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 683 - 739
Target Start/End: Complemental strand, 18595974 - 18595918
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcc 739  Q
    |||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||    
T  18595974 aaaaaggcaacccgatgcactaaaactcccgcatacacagggtccgggaaggggtcc 18595918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 704 - 770
Target Start/End: Original strand, 24365079 - 24365143
Alignment:
Q  704 aaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||| |||||||||||| |||||||||||||||||||  |||||||||||| ||||||||||    
T  24365079 aaagctcccacatacgcagggtccgggaaggggtcccaccat--ttggtgtattgttcgcagcctta 24365143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 688 - 746
Target Start/End: Complemental strand, 28407534 - 28407476
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccatt 746  Q
    ||||||||| |||| ||||||||||||||||| ||||| ||||||||||||||||||||    
T  28407534 ggcaacccggtgcagtaaagctcccgcatacgtagggtccgggaaggggtcccaccatt 28407476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 688 - 770
Target Start/End: Original strand, 44742522 - 44742603
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| |||| |||||||| |||||||||| || ||||| |  ||||||||||||||||| |||||||||||||||||||||||    
T  44742522 ggcaccccggtgcactaatgctcccgcatccgtagggtccaagaaggggtcccaccatt-ttggtgtattgtacgcagcctta 44742603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 698 - 770
Target Start/End: Complemental strand, 19729461 - 19729391
Alignment:
Q  698 tgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||| |||||||| ||| ||||||| |||||||||||||||||||  |||||||||||||| ||||||||    
T  19729461 tgcactagagctcccgtatatgcagggtccgggaaggggtcccaccat--ttggtgtattgtacacagcctta 19729391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 683 - 770
Target Start/End: Complemental strand, 26457863 - 26457780
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||| |||||| ||||||||||||||| |||||||| |||  ||  |||||||||||||  ||||||||||||||||||||||||    
T  26457863 aaaaaggaaacccggtgcactaaagctccctcatacgcaaggtcagg--aggggtcccacca--attggtgtattgtacgcagcctta 26457780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 683 - 770
Target Start/End: Original strand, 18164759 - 18164844
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||||||| |||||||||||||||||||||||||||| ||||||  |||| || | |  ||||||||||||||||| |||||    
T  18164759 aaaatggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaatggtcacatcct--ttggtgtattgtacgcaacctta 18164844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 683 - 746
Target Start/End: Original strand, 35107310 - 35107373
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccatt 746  Q
    |||| ||||||||| |||||||||||| |||||||| ||| || ||||||||||||||||||||    
T  35107310 aaaagggcaacccggtgcactaaagcttccgcatacacagcgtccgggaaggggtcccaccatt 35107373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 683 - 733
Target Start/End: Original strand, 27468091 - 27468141
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaag 733  Q
    |||| ||||||||| |||||||||||||||||||||||||||| |||||||    
T  27468091 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaag 27468141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 728 - 770
Target Start/End: Complemental strand, 43942417 - 43942375
Alignment:
Q  728 gggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  43942417 gggaaggggtcccaccatttttggtgtattgtacgcagcctta 43942375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 698 - 770
Target Start/End: Complemental strand, 2626643 - 2626573
Alignment:
Q  698 tgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||| ||||||||||||| |||||||  |||||||||||||| |||  |||||||||||||||||| ||||    
T  2626643 tgcactgaagctcccgcatatgcagggtctgggaaggggtcccatcat--ttggtgtattgtacgcagtctta 2626573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 697 - 770
Target Start/End: Original strand, 30231343 - 30231415
Alignment:
Q  697 atgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||||||||||||| | || | |||||||||| | ||||||||||||| ||||| |||||||||||||||||    
T  30231343 atgcactaaagctcccacgtatggagggttcgggtaagggtcccaccatt-ttggtatattgtacgcagcctta 30231415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 683 - 770
Target Start/End: Complemental strand, 389781 - 389696
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||| || ||| ||||||||||||| ||||||||||||||  || ||||| ||||| |||  ||||||||||||||||| |||||    
T  389781 aaaaaggtaatccggtgcactaaagctctcgcatacgcagggtcaggaaagggatcccatcat--ttggtgtattgtacgcaacctta 389696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 705 - 770
Target Start/End: Original strand, 11000970 - 11001033
Alignment:
Q  705 aagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||| |||||  ||||||||||| ||||||||||||||  |||||||||||||| ||||||||    
T  11000970 aagctcctgcataaacagggttcgggtaggggtcccaccat--ttggtgtattgtacacagcctta 11001033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 688 - 770
Target Start/End: Complemental strand, 33867083 - 33867001
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||| |||||||||||| | |||||||||||||||||||||  ||  ||||||| ||  ||||||||| |||| ||||    
T  33867083 ggcaacccggtgcactaaagcttctgcatacgcagggttcgggaagaagtgtcaccattttttatgtattgtatgcagtctta 33867001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 688 - 745
Target Start/End: Original strand, 36486570 - 36486627
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccat 745  Q
    |||||||||  ||||||||||||| ||||||||| ||| ||||||| |||||||||||    
T  36486570 ggcaacccggggcactaaagctcctgcatacgcaaggtccgggaagaggtcccaccat 36486627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 703 - 762
Target Start/End: Complemental strand, 24245565 - 24245505
Alignment:
Q  703 taaagctcccgcatacgcagggttcgggaaggggtcccacca-ttattggtgtattgtacg 762  Q
    ||||||||||||||||||||||| | |||||||||||||| | || |||||| ||||||||    
T  24245565 taaagctcccgcatacgcagggtccaggaaggggtcccacaattttttggtgcattgtacg 24245505  T

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Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 707 - 770
Target Start/End: Original strand, 20869523 - 20869582
Alignment:
Q  707 gctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||||| ||||||| |||||||||||| ||||    |||||||||||||| ||||||||    
T  20869523 gctcccgcatatgcagggtccgggaaggggtctcacc----ttggtgtattgtacacagcctta 20869582  T

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Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 692 - 770
Target Start/End: Complemental strand, 31454323 - 31454245
Alignment:
Q  692 acccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||||| |||||| ||||||||||||||||||| |  || ||||| || |||| || ||||||| ||||||| ||||    
T  31454323 acccgatgtactaaatctcccgcatacgcagggtttgaaaaagggtctcatcattttttgtgtattatacgcagtctta 31454245  T

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Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 698 - 770
Target Start/End: Complemental strand, 22598277 - 22598208
Alignment:
Q  698 tgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||||||| ||||||||||||| ||| |||||| ||||| |||||  |||||||||||||||  |||||||    
T  22598277 tgcactaaag-tcccgcatacgcaaggtccgggaaagggtctcacca--attggtgtattgtacatagcctta 22598208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 9e-32; HSPs: 64)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 688 - 770
Target Start/End: Complemental strand, 10543831 - 10543749
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  10543831 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagcctta 10543749  T

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Target: chr2; HSP #2
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 688 - 770
Target Start/End: Complemental strand, 14530451 - 14530369
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||    
T  14530451 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgtagcctta 14530369  T

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Target: chr2; HSP #3
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 682 - 770
Target Start/End: Complemental strand, 9671316 - 9671230
Alignment:
Q  682 taaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||    
T  9671316 taaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccat--ttggtgtattgtacgcagcctta 9671230  T

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Target: chr2; HSP #4
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 683 - 770
Target Start/End: Complemental strand, 10546299 - 10546214
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||    
T  10546299 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccat--ttggtgtattgtacgcagcctta 10546214  T

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Target: chr2; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 682 - 770
Target Start/End: Original strand, 8455314 - 8455400
Alignment:
Q  682 taaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||| ||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||    
T  8455314 taaaagggcaacccggtgcactaaagctccggcatacgcagggtccgggaaggggtcccaccat--ttggtgtattgtacgcagcctta 8455400  T

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Target: chr2; HSP #6
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 683 - 770
Target Start/End: Original strand, 25249737 - 25249822
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||||||| ||||||||||||| |||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||    
T  25249737 aaaagggcaacccggtgcactaaagctcacgcatacgcagggttcgggaagggatcccaccat--ttggtgtattgtacgcagcctta 25249822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 682 - 770
Target Start/End: Complemental strand, 5841167 - 5841079
Alignment:
Q  682 taaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||| |||||| || |||||||||||||||||||| || |||| |||||||||||||||||||||||| ||||||||||||| |||||    
T  5841167 taaaagggcaactcggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattgatgtattgtacgcatcctta 5841079  T

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Target: chr2; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 683 - 770
Target Start/End: Complemental strand, 36871627 - 36871543
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||||||| |||||||||||||||||||||||| ||| |||||||||||||||||||  |||||||||||||||||||||||    
T  36871627 aaaagggcaacccggtgcactaaagctcccgcatacgca-ggtccgggaaggggtcccaccat--ttggtgtattgtacgcagcctta 36871543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 683 - 770
Target Start/End: Original strand, 24200622 - 24200709
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||||||| ||||||||||||| | ||||| |||||| ||||||||| |||||||||| |||||||||||||||||||||||    
T  24200622 aaaagggcaacccggtgcactaaagctctcacatactcagggtccgggaagggttcccaccatttttggtgtattgtacgcagcctta 24200709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 682 - 770
Target Start/End: Original strand, 21779259 - 21779345
Alignment:
Q  682 taaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||| ||||||||| ||||||| |||||||||||| ||||||| |||||||||||||||||||  ||||||||||||||||| |||||    
T  21779259 taaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccat--ttggtgtattgtacgcaacctta 21779345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 683 - 770
Target Start/End: Complemental strand, 14444864 - 14444779
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||||| | |||||||||||||||||||||||||||| |||||||||||||||||||  ||||||||| |||| ||||||||    
T  14444864 aaaagggcaacctggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccat--ttggtgtatcgtacacagcctta 14444779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 683 - 770
Target Start/End: Complemental strand, 17668138 - 17668053
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||||||| |||||||||||||||  |||||||||||||| |||||||| |||||||  |||||||||||||||||||||||    
T  17668138 aaaagggcaacccggtgcactaaagctcccatatacgcagggttcgagaaggggttccaccat--ttggtgtattgtacgcagcctta 17668053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 683 - 770
Target Start/End: Complemental strand, 17896396 - 17896311
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| |||||| |||||||||||||||||| |||||||||||| || ||||||||||||||||  ||||| |||||||||||||||||    
T  17896396 aaaagggcaactcgatgcactaaagctcccacatacgcagggtccgagaaggggtcccaccat--ttggtatattgtacgcagcctta 17896311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 689 - 765
Target Start/End: Complemental strand, 23488613 - 23488537
Alignment:
Q  689 gcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcag 765  Q
    |||||||| ||||||||||||| |||||||||||||| |||||||||||||||||||| || |||||||| ||||||    
T  23488613 gcaacccggtgcactaaagctctcgcatacgcagggtccgggaaggggtcccaccattttttgtgtattgcacgcag 23488537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 688 - 770
Target Start/End: Complemental strand, 25632640 - 25632560
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||| |||||||||||||||||||||| | ||||||||||||  |||||||||  |||||||||||||||||||||||    
T  25632640 ggcaacccggtgcactaaagctcccgcatacgtaaggttcgggaaggaatcccaccat--ttggtgtattgtacgcagcctta 25632560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 683 - 768
Target Start/End: Original strand, 24859987 - 24860070
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcct 768  Q
    |||||||||| ||| |||||||||||||||||||||||||||| || |||||||| | |||||  |||||||||||||||||||||    
T  24859987 aaaaaggcaatccggtgcactaaagctcccgcatacgcagggtccgagaaggggttctaccat--ttggtgtattgtacgcagcct 24860070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 682 - 770
Target Start/End: Complemental strand, 11514572 - 11514487
Alignment:
Q  682 taaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||| ||||| ||| ||||||||||||||||||||||||||||  ||||| ||||||||||||  |||||||||||||||||||||||    
T  11514572 taaaagggcaatccggtgcactaaagctcccgcatacgcagggtctgggaa-gggtcccaccat--ttggtgtattgtacgcagcctta 11514487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 698 - 770
Target Start/End: Complemental strand, 24890532 - 24890462
Alignment:
Q  698 tgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||||  |||||||||||||| |||||||||    
T  24890532 tgcactaaagctcctgcatacgcagggtccgggaaggggtcccacca--attggtgtattgtatgcagcctta 24890462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 682 - 770
Target Start/End: Original strand, 39914304 - 39914389
Alignment:
Q  682 taaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||| ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||  | |||||||||||| || |||||    
T  39914304 taaaagggcaacccgatgcactaaagctcccgcatacgcaggg-tcaggaaggggtcccaccat--tcggtgtattgtacacatcctta 39914389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 683 - 770
Target Start/End: Complemental strand, 17623700 - 17623615
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||||||  |||||||||||| || |||||||||| ||||||||||||| |||||||  |||||||||||||||||||||||    
T  17623700 aaaagggcaacccagtgcactaaagcttccacatacgcaggattcgggaaggggttccaccat--ttggtgtattgtacgcagcctta 17623615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 698 - 770
Target Start/End: Complemental strand, 19615114 - 19615043
Alignment:
Q  698 tgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||||||||||| ||||||||||||||||||||||||| |||| ||||||||| |||||||||||| ||||    
T  19615114 tgcactaaagctcctgcatacgcagggttcgggaaggggt-ccactattattggtatattgtacgcagtctta 19615043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 683 - 770
Target Start/End: Complemental strand, 27573756 - 27573671
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||||||||||||||||||||||| ||||| ||||||| |||||  ||| |||||||  |||||||||||||||||||||||    
T  27573756 aaaagggcaacccgatgcactaaagctcccacatacacagggtttgggaaatggttccaccat--ttggtgtattgtacgcagcctta 27573671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 688 - 770
Target Start/End: Original strand, 25079721 - 25079801
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||| |||||||||||||  ||||||||||||| |||||||||||||||||||  | ||||||||||||||| |||||    
T  25079721 ggcaacccggtgcactaaagctcttgcatacgcagggtccgggaaggggtcccaccat--tcggtgtattgtacgcatcctta 25079801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 688 - 770
Target Start/End: Original strand, 40762238 - 40762318
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||| ||||||||||||||| |||||||||||| | |||| ||||||||||||  ||||||||||||||| |||||||    
T  40762238 ggcaacccggtgcactaaagctcccacatacgcagggtccaggaaagggtcccaccat--ttggtgtattgtacgtagcctta 40762318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 682 - 770
Target Start/End: Original strand, 26684617 - 26684704
Alignment:
Q  682 taaaaagg-caacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||||| ||| ||| |||| ||||||||||||||||||||||||||||||| |||||||||||  || || |||||||||||||||||    
T  26684617 taaaaaggacaatccggtgcattaaagctcccgcatacgcagggttcgggaagaggtcccaccat--ttagtatattgtacgcagcctta 26684704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 681 - 770
Target Start/End: Complemental strand, 44643661 - 44643574
Alignment:
Q  681 ttaaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||| |||| |||| |||||||| |||||||||||||||||||  ||||||||||||||||||  |||||  ||||||||||||||||    
T  44643661 ttaaaagggcagcccggtgcactaaggctcccgcatacgcagggtctgggaaggggtcccaccat--ttggtacattgtacgcagcctta 44643574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 698 - 770
Target Start/End: Original strand, 19977728 - 19977798
Alignment:
Q  698 tgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||||||||||||||| || ||||||||||||| |||||||||  ||||||||||||||||| |||||    
T  19977728 tgcactaaagctcccgcatacacaaggttcgggaagggatcccaccat--ttggtgtattgtacgcaacctta 19977798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 691 - 744
Target Start/End: Complemental strand, 34766383 - 34766330
Alignment:
Q  691 aacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccacca 744  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  34766383 aacccgttgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca 34766330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 688 - 745
Target Start/End: Original strand, 40579753 - 40579810
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccat 745  Q
    ||||||||| ||||||||||||||||||||| |||||| |||||||||||||||||||    
T  40579753 ggcaacccggtgcactaaagctcccgcatactcagggtccgggaaggggtcccaccat 40579810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 700 - 766
Target Start/End: Original strand, 4516367 - 4516431
Alignment:
Q  700 cactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagc 766  Q
    |||||||||| || |||||||||||| ||||||||||||||||||  ||||||||||||||||||||    
T  4516367 cactaaagcttccacatacgcagggtccgggaaggggtcccacca--attggtgtattgtacgcagc 4516431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 683 - 770
Target Start/End: Complemental strand, 7214672 - 7214585
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||||||||| | ||||||||| ||| ||||||||||| || || |||||| || ||||||| || ||||||||||||||||||||    
T  7214672 aaaaaggcaacctggtgcactaaaactctcgcatacgcagtgtccgagaagggatctcaccattttttgtgtattgtacgcagcctta 7214585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 688 - 770
Target Start/End: Original strand, 13245099 - 13245179
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||||| |||||||||||||| ||| ||| ||| |||||||||||||||||||  || ||||| ||||||||||||||    
T  13245099 ggcaacccgatacactaaagctcccgtatatgcatggtccgggaaggggtcccaccat--ttagtgtaatgtacgcagcctta 13245179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 704 - 770
Target Start/End: Original strand, 21377093 - 21377157
Alignment:
Q  704 aaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||| ||||||||||||||||||||||||||||||||  |||||| ||||||| ||||||||    
T  21377093 aaagctcccacatacgcagggttcgggaaggggtcccaccat--ttggtgcattgtacccagcctta 21377157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 688 - 770
Target Start/End: Complemental strand, 23397895 - 23397815
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||| ||||||| |||||||||||| | ||||| || ||||||||||||||||  ||||||||||||||| |||||||    
T  23397895 ggcaacccggtgcactagagctcccgcatatgtagggtccgagaaggggtcccaccat--ttggtgtattgtacgtagcctta 23397815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 701 - 760
Target Start/End: Original strand, 31158456 - 31158515
Alignment:
Q  701 actaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgta 760  Q
    |||||||||||||||||||||||||  ||||||||||||||||||| ||||| |||||||    
T  31158456 actaaagctcccgcatacgcagggtctgggaaggggtcccaccatttttggtttattgta 31158515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 682 - 744
Target Start/End: Complemental strand, 34080238 - 34080176
Alignment:
Q  682 taaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccacca 744  Q
    ||||| ||||||||| ||||||||| |||||||||| ||||||| ||||||||||||||||||    
T  34080238 taaaagggcaacccggtgcactaaaactcccgcatatgcagggtccgggaaggggtcccacca 34080176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 695 - 764
Target Start/End: Original strand, 19185754 - 19185823
Alignment:
Q  695 cgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgca 764  Q
    ||||| ||||||||||||||||||||||||| | ||||||||| |||||||| || ||| ||||||||||    
T  19185754 cgatgtactaaagctcccgcatacgcagggtccaggaaggggttccaccattttttgtgcattgtacgca 19185823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 700 - 764
Target Start/End: Complemental strand, 25641620 - 25641558
Alignment:
Q  700 cactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgca 764  Q
    ||||||||||| |||||||||||| |||||||||||||||||| ||  |||||||||||||||||    
T  25641620 cactaaagctctcgcatacgcaggattcgggaaggggtcccacaat--ttggtgtattgtacgca 25641558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 688 - 745
Target Start/End: Complemental strand, 41409993 - 41409936
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccat 745  Q
    ||||||||| |||||| ||||||||||||| ||||||| |||||||||||||||||||    
T  41409993 ggcaacccggtgcactgaagctcccgcatatgcagggtccgggaaggggtcccaccat 41409936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 684 - 732
Target Start/End: Original strand, 124914 - 124962
Alignment:
Q  684 aaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaa 732  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  124914 aaaaggcaacccggtgcactaaagctcccgcatacgcagggtccgggaa 124962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 698 - 770
Target Start/End: Original strand, 44449397 - 44449468
Alignment:
Q  698 tgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| |||| ||||| || ||||||||| |||||||||||||||| ||| |||||||||||||||||||||||    
T  44449397 tgcattaaaactcccacaaacgcagggtccgggaaggggtcccactatt-ttggtgtattgtacgcagcctta 44449468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 704 - 770
Target Start/End: Original strand, 32781308 - 32781372
Alignment:
Q  704 aaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||||||||| ||||||  ||||||||||||||||||  |||||||||||||||||| ||||    
T  32781308 aaagctcccgcatacacagggtctgggaaggggtcccaccat--ttggtgtattgtacgcagtctta 32781372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 700 - 769
Target Start/End: Original strand, 99281 - 99348
Alignment:
Q  700 cactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctt 769  Q
    ||||||||||||||||||| ||||||  | |||||||| |||||||  ||||||||||||||||||||||    
T  99281 cactaaagctcccgcatacacagggtctgagaaggggttccaccat--ttggtgtattgtacgcagcctt 99348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 682 - 732
Target Start/End: Complemental strand, 22371249 - 22371199
Alignment:
Q  682 taaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaa 732  Q
    ||||| ||||||||| |||||||||||||||||||||||||||| ||||||    
T  22371249 taaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaa 22371199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 698 - 770
Target Start/End: Original strand, 12023933 - 12024003
Alignment:
Q  698 tgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||||| ||  ||||||||||| ||||| |||||||||||||  |||||||||||||||||||||||    
T  12023933 tgcattaaagcttccaaatacgcagggtccgggagggggtcccaccat--ttggtgtattgtacgcagcctta 12024003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 698 - 766
Target Start/End: Original strand, 39499244 - 39499310
Alignment:
Q  698 tgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagc 766  Q
    |||||||||||||||||||||||||| ||||  ||||| |||||||||  ||| |||||||||||||||    
T  39499244 tgcactaaagctcccgcatacgcaggattcgaaaagggatcccaccat--ttgatgtattgtacgcagc 39499310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 698 - 746
Target Start/End: Complemental strand, 14544187 - 14544139
Alignment:
Q  698 tgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccatt 746  Q
    |||||||||||||||||||||||||||| | ||||||||||| ||||||    
T  14544187 tgcactaaagctcccgcatacgcagggtcccggaaggggtccgaccatt 14544139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 715 - 770
Target Start/End: Complemental strand, 22371158 - 22371105
Alignment:
Q  715 atacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| |||||| |||||||||||||||||||  |||||||||||||||||||||||    
T  22371158 atacacagggtccgggaaggggtcccaccat--ttggtgtattgtacgcagcctta 22371105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 688 - 739
Target Start/End: Complemental strand, 8576026 - 8575975
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcc 739  Q
    ||||||| | ||||||||||||||| |||||||||||| |||||||||||||    
T  8576026 ggcaacctggtgcactaaagctcccacatacgcagggtccgggaaggggtcc 8575975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 684 - 770
Target Start/End: Original strand, 31821343 - 31821427
Alignment:
Q  684 aaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||||| || | |||| |||||||||||||||| |||| ||||| ||||||||||| |||  |||||||||||||| || |||||    
T  31821343 aaaaggcagccaggtgcattaaagctcccgcatacacaggtttcggaaaggggtcccatcat--ttggtgtattgtacacaacctta 31821427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 700 - 745
Target Start/End: Original strand, 24059012 - 24059057
Alignment:
Q  700 cactaaagctcccgcatacgcagggttcgggaaggggtcccaccat 745  Q
    ||||||||||||| |||||||||||| ||| |||||||||||||||    
T  24059012 cactaaagctcccacatacgcagggtccggaaaggggtcccaccat 24059057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 698 - 770
Target Start/End: Complemental strand, 17471671 - 17471600
Alignment:
Q  698 tgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||| |||||||||| |||||||  ||||||||||| || |||| ||||| |||||||||||| ||||    
T  17471671 tgcactaaaactcccgcataggcagggtcagggaaggggtctcatcatt-ttggtatattgtacgcagtctta 17471600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 698 - 746
Target Start/End: Complemental strand, 31523352 - 31523304
Alignment:
Q  698 tgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccatt 746  Q
    |||||||||||||||||||| |||||||| ||||| |||| ||||||||    
T  31523352 tgcactaaagctcccgcatatgcagggtttgggaaagggttccaccatt 31523304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 683 - 735
Target Start/End: Original strand, 39189503 - 39189555
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggg 735  Q
    |||||||||||||| ||||||| |||||||||||| || |||| |||||||||    
T  39189503 aaaaaggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggg 39189555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 699 - 770
Target Start/End: Original strand, 15296421 - 15296491
Alignment:
Q  699 gcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| |||||| || |||||||||||| || |||||| |||||| ||| ||||| |||||||||||||||||    
T  15296421 gcaccaaagcttccacatacgcagggtccgagaagggatcccactatt-ttggtatattgtacgcagcctta 15296491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 683 - 748
Target Start/End: Complemental strand, 1289159 - 1289093
Alignment:
Q  683 aaaaaggcaacccgatgcactaaa-gctcccgcatacgcagggttcgggaaggggtcccaccattat 748  Q
    |||| ||||| ||| ||||||||| ||||||||||| ||| | | ||||||||||||||||||||||    
T  1289159 aaaagggcaatccggtgcactaaaagctcccgcatatgcatgatccgggaaggggtcccaccattat 1289093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 688 - 738
Target Start/End: Original strand, 3633712 - 3633762
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtc 738  Q
    |||||| || |||||||||||||||||||| || |||| ||||||||||||    
T  3633712 ggcaactcggtgcactaaagctcccgcatatgcggggtccgggaaggggtc 3633762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 683 - 765
Target Start/End: Complemental strand, 4795891 - 4795810
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcag 765  Q
    |||| ||||||||  |||||||||||| | |||||| || ||| ||||||  |||||||||||| ||||||||||| ||||||    
T  4795891 aaaagggcaacccactgcactaaagcttcggcatacacaaggtccgggaaaaggtcccaccatt-ttggtgtattgcacgcag 4795810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 696 - 738
Target Start/End: Original strand, 22363507 - 22363549
Alignment:
Q  696 gatgcactaaagctcccgcatacgcagggttcgggaaggggtc 738  Q
    ||||||||||||||||||| ||||||||||||| ||| |||||    
T  22363507 gatgcactaaagctcccgcgtacgcagggttcgagaaagggtc 22363549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 688 - 769
Target Start/End: Original strand, 40416875 - 40416954
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctt 769  Q
    ||||||||| ||||||||||||| |||||| ||||||| |   || |||||||| ||  ||||||||||||||| |||||||    
T  40416875 ggcaacccggtgcactaaagctctcgcatatgcagggtccaaaaaagggtcccatca--attggtgtattgtacacagcctt 40416954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 722 - 770
Target Start/End: Original strand, 23145736 - 23145782
Alignment:
Q  722 gggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| |||||| |||||||||||  ||||||||||||||||||||||||    
T  23145736 gggtccgggaaagggtcccacca--attggtgtattgtacgcagcctta 23145782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 722 - 770
Target Start/End: Original strand, 23557526 - 23557572
Alignment:
Q  722 gggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| |||||| |||||||||||  ||||||||||||||||||||||||    
T  23557526 gggtccgggaaagggtcccacca--attggtgtattgtacgcagcctta 23557572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 698 - 770
Target Start/End: Complemental strand, 30826156 - 30826087
Alignment:
Q  698 tgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||||||||||||||||| | |||||  ||||| |||| |||||||  ||||||||||||||||| |||||    
T  30826156 tgcactaaagctcccgcatatgtagggtctgggaa-gggttccaccat--ttggtgtattgtacgcaacctta 30826087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 704 - 745
Target Start/End: Complemental strand, 33795400 - 33795359
Alignment:
Q  704 aaagctcccgcatacgcagggttcgggaaggggtcccaccat 745  Q
    ||||||||||||||| ||||||  ||||||||||||||||||    
T  33795400 aaagctcccgcatacacagggtctgggaaggggtcccaccat 33795359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 69; Significance: 1e-30; HSPs: 71)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 682 - 770
Target Start/End: Complemental strand, 10668387 - 10668299
Alignment:
Q  682 taaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||| ||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||    
T  10668387 taaaagggcaacccggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccattattggtgtattgtacgcaacctta 10668299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 683 - 770
Target Start/End: Complemental strand, 27201808 - 27201721
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| |||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||||||    
T  27201808 aaaagggcaacccaatgcactaaagctcccgcatacgcaaggtccgggaaggggtcccaccatttttggtgtattgtacgcagcctta 27201721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 681 - 770
Target Start/End: Complemental strand, 35005286 - 35005197
Alignment:
Q  681 ttaaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||| ||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||| |||||||||    
T  35005286 ttaaaagggcaacccggtgcactaaagcgcccgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtatgcagcctta 35005197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 683 - 770
Target Start/End: Complemental strand, 18944805 - 18944717
Alignment:
Q  683 aaaaaggcaacccgatgcactaaa-gctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||||||| ||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  18944805 aaaagggcaacccggtgcactaaaagctcccgcatacgcagggtccgggaaggggtcccaccattgttggtgtattgtacgcagcctta 18944717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 682 - 770
Target Start/End: Original strand, 20004088 - 20004176
Alignment:
Q  682 taaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||  |||||||||||||||||||||||||||||||||||||||||||    
T  20004088 taaaagggcaacccggtgcactaaagctcccgcatatgcggggtctgggaaggggtcccaccattattggtgtattgtacgcagcctta 20004176  T

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Target: chr1; HSP #6
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 682 - 770
Target Start/End: Original strand, 30395724 - 30395812
Alignment:
Q  682 taaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||| |||||| || |||||||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  30395724 taaaagggcaactcggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagcctta 30395812  T

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Target: chr1; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 688 - 770
Target Start/End: Complemental strand, 4349792 - 4349712
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||    
T  4349792 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccat--ttggtgtattgtacgcagcctta 4349712  T

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Target: chr1; HSP #8
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 679 - 770
Target Start/End: Complemental strand, 19414600 - 19414511
Alignment:
Q  679 tgttaaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||||| ||||||||| ||||||| |||||||||||| ||||||| |||||||||||||||||||  |||||||||||||||||||||||    
T  19414600 tgttaaaagggcaacccggtgcactagagctcccgcatatgcagggtacgggaaggggtcccaccat--ttggtgtattgtacgcagcctta 19414511  T

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Target: chr1; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 691 - 770
Target Start/End: Original strand, 18741964 - 18742043
Alignment:
Q  691 aacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||| ||||||||||||| ||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||    
T  18741964 aacccggtgcactaaagctctcgcatacgcagggtctgggaaggggtcccaccatttttggtgtattgtacgcagcctta 18742043  T

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Target: chr1; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 683 - 770
Target Start/End: Original strand, 45812536 - 45812621
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||||||||||| ||||||| |||||||||||| |||||||| ||||||||||||||||||  ||||||||||||| |||||||||    
T  45812536 aaaaaggcaacccggtgcactagagctcccgcatatgcagggtttgggaaggggtcccaccat--ttggtgtattgtatgcagcctta 45812621  T

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Target: chr1; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 683 - 770
Target Start/End: Original strand, 46247952 - 46248037
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||||||| | |||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||| ||||    
T  46247952 aaaagggcaacccggtacactaaagctcccgcatacgcagggtccgggaaggggtcccaccat--ttggtgtattgtacgcagtctta 46248037  T

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Target: chr1; HSP #12
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 683 - 770
Target Start/End: Original strand, 42304206 - 42304293
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||| ||| ||||||||||||||| |||||||||||| |||||||||||||||||||| || |||||||||||||| |||||    
T  42304206 aaaagggcaatccggtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattttttgtgtattgtacgcaacctta 42304293  T

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Target: chr1; HSP #13
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 683 - 758
Target Start/End: Complemental strand, 50606562 - 50606487
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattg 758  Q
    |||| ||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||    
T  50606562 aaaagggcaacccggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccatttttggtgtattg 50606487  T

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Target: chr1; HSP #14
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 688 - 765
Target Start/End: Complemental strand, 45402250 - 45402175
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcag 765  Q
    ||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||  ||||||||||||||||||    
T  45402250 ggcaacccggtgcactaaagctcccgcatacgcagggtctgggaaggggtcccaccat--ttggtgtattgtacgcag 45402175  T

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Target: chr1; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 682 - 770
Target Start/End: Original strand, 34725096 - 34725182
Alignment:
Q  682 taaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||| ||||||||| ||||||| |||||||||||| ||||||| |||||||||||||||||||  || ||||||||||||||||||||    
T  34725096 taaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccat--ttagtgtattgtacgcagcctta 34725182  T

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Target: chr1; HSP #16
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 683 - 770
Target Start/End: Original strand, 1517310 - 1517395
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||||||| |||||||||||||| |||||||||||||  | |||||||||||||||  ||||||||||||||||||||||||    
T  1517310 aaaagggcaacccggtgcactaaagctcctgcatacgcagggtctgagaaggggtcccacca--attggtgtattgtacgcagcctta 1517395  T

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Target: chr1; HSP #17
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 683 - 770
Target Start/End: Complemental strand, 6925259 - 6925174
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||||| || |||||||||||||||||||||||||||  |||||||||||||||||||  | |||||||||| ||||||||||    
T  6925259 aaaaaggcaactcggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccat--tcggtgtattgtccgcagcctta 6925174  T

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Target: chr1; HSP #18
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 683 - 770
Target Start/End: Original strand, 35253186 - 35253271
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||| ||| ||||||| |||||||||||| ||||||| |||||||||||||||||||  |||||||||||||||||||||||    
T  35253186 aaaagggcaatccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccat--ttggtgtattgtacgcagcctta 35253271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 704 - 770
Target Start/End: Complemental strand, 15505702 - 15505638
Alignment:
Q  704 aaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||    
T  15505702 aaagctcccgcatacgcagggttcgggaaggggtcccaccat--ttggtgtattgtacgcagtctta 15505638  T

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Target: chr1; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 688 - 770
Target Start/End: Complemental strand, 46991958 - 46991878
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||  | |||||||||||| ||||||||    
T  46991958 ggcaacccggtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccat--tcggtgtattgtacacagcctta 46991878  T

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Target: chr1; HSP #21
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 681 - 770
Target Start/End: Complemental strand, 9939625 - 9939535
Alignment:
Q  681 ttaaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaa-ggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||| || |||||| |||||||||||||||||||||||||||| || ||| |||||||||||||| ||||||||||| ||||| |||||    
T  9939625 ttaaaagggtaacccggtgcactaaagctcccgcatacgcagggtccgagaagggggtcccaccatttttggtgtattgcacgcaacctta 9939535  T

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Target: chr1; HSP #22
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 681 - 770
Target Start/End: Complemental strand, 14617199 - 14617112
Alignment:
Q  681 ttaaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||| || |||||| |||||||||||||||||||| ||||||| ||||||||| |||||||||  ||||||||||||||||| |||||    
T  14617199 ttaaaagggtaacccggtgcactaaagctcccgcatatgcagggtccgggaagggatcccaccat--ttggtgtattgtacgcaacctta 14617112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 688 - 770
Target Start/End: Original strand, 19932757 - 19932839
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||| | |||||||| | ||  ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  19932757 ggcaacctggtgcactaatgatcttgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagcctta 19932839  T

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Target: chr1; HSP #24
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 689 - 770
Target Start/End: Original strand, 23768325 - 23768404
Alignment:
Q  689 gcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||| ||||||||||||||||||||||||||||  ||||||| ||||||||||  |||||||||||||||||||||||    
T  23768325 gcaatccgctgcactaaagctcccgcatacgcagggtctgggaaggtgtcccaccat--ttggtgtattgtacgcagcctta 23768404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 682 - 766
Target Start/End: Complemental strand, 27474440 - 27474358
Alignment:
Q  682 taaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagc 766  Q
    ||||| ||||| ||| |||||||||||||||||||||||||||| |||||||||||||||||||  |  ||||||||||||||||    
T  27474440 taaaagggcaatccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccat--tcagtgtattgtacgcagc 27474358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 698 - 770
Target Start/End: Original strand, 32632571 - 32632641
Alignment:
Q  698 tgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||| ||||||||||||| |||||||| ||||||||||||||||||  |||||||||||||||||||||||    
T  32632571 tgcactcaagctcccgcatatgcagggtttgggaaggggtcccaccat--ttggtgtattgtacgcagcctta 32632641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 698 - 770
Target Start/End: Complemental strand, 19701715 - 19701644
Alignment:
Q  698 tgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||| || |||||    
T  19701715 tgcactaaagctcccgcatacgcagggtccgggaaggggccccaccatt-ttggtgtattgtacccatcctta 19701644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 683 - 770
Target Start/End: Original strand, 31382213 - 31382298
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||||||| | || ||||||||||||||| ||||||| | |||||||||||||||||  |||||||||||||||||||||||    
T  31382213 aaaagggcaacccggtacagtaaagctcccgcatatgcagggtccaggaaggggtcccaccat--ttggtgtattgtacgcagcctta 31382298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 683 - 770
Target Start/End: Original strand, 38478281 - 38478366
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||||||| ||||||| |||||||||||| ||||||| || |||||||| |||||||  |||||||||||||||||||||||    
T  38478281 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgagaaggggttccaccat--ttggtgtattgtacgcagcctta 38478366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 688 - 770
Target Start/End: Original strand, 10378739 - 10378819
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| |||| |||||||||||||||||||| ||||||| |  ||||||||||||||||  |||||||||||||||||||||||    
T  10378739 ggcagcccggtgcactaaagctcccgcatatgcagggtccaagaaggggtcccaccat--ttggtgtattgtacgcagcctta 10378819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 693 - 770
Target Start/End: Original strand, 35117774 - 35117852
Alignment:
Q  693 cccgatgcactaaagctcccgcat-acgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| |||||||||||||| |||| ||||||||| ||||||||||||||| |||| |||||||||||||| ||||||||    
T  35117774 cccggtgcactaaagctcctgcattacgcagggtccgggaaggggtcccatcatttttggtgtattgtacacagcctta 35117852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 698 - 770
Target Start/End: Original strand, 12126851 - 12126921
Alignment:
Q  698 tgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||| |||||||||||| ||||||| |||||||||||||||| ||  |||||||||||||||||||||||    
T  12126851 tgcactacagctcccgcatatgcagggtccgggaaggggtcccacaat--ttggtgtattgtacgcagcctta 12126921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 682 - 770
Target Start/End: Original strand, 41319804 - 41319890
Alignment:
Q  682 taaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||| ||||||||  |||||| || |||||||||| | ||||||||||||||||||||| |||  |||||||||||||||||||||||    
T  41319804 taaaagggcaacccagtgcactgaaactcccgcatatgaagggttcgggaaggggtcccatcat--ttggtgtattgtacgcagcctta 41319890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 698 - 770
Target Start/End: Original strand, 2435800 - 2435871
Alignment:
Q  698 tgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||||||||||||| || ||||| ||| |||||||||||||||| |||||||||||||||||| ||||    
T  2435800 tgcactaaagctcccgcatgcggagggtacggaaaggggtcccaccatt-ttggtgtattgtacgcaggctta 2435871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 682 - 769
Target Start/End: Original strand, 20999848 - 20999933
Alignment:
Q  682 taaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctt 769  Q
    ||||| |||| |||| ||||||||||||||||| |||||||||| | |||||||| |||| |||  ||||||||||||||||||||||    
T  20999848 taaaagggcagcccggtgcactaaagctcccgcgtacgcagggtgccggaaggggccccatcat--ttggtgtattgtacgcagcctt 20999933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 698 - 770
Target Start/End: Complemental strand, 22325037 - 22324966
Alignment:
Q  698 tgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||||||||||||||||||||| |||||| ||||  |||||||| ||||||||||||| |||||||||    
T  22325037 tgcactaaagctcccgcatacgcaggg-tcgggacggggctccaccatttttggtgtattgtatgcagcctta 22324966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 683 - 770
Target Start/End: Complemental strand, 43768298 - 43768213
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| |||| |||| |||| ||||||||||| |||||||||||  |||||||||||||||||  |||||||||||||| |||||||||    
T  43768298 aaaagggcagcccggtgcattaaagctcccgtatacgcagggtctgggaaggggtcccacca--attggtgtattgtaggcagcctta 43768213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 704 - 770
Target Start/End: Complemental strand, 11596650 - 11596586
Alignment:
Q  704 aaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||||||||||||||||||| | |||||||||||||||||  |||||||||| ||||||||||||    
T  11596650 aaagctcccgcatacgcagggtccaggaaggggtcccaccat--ttggtgtattatacgcagcctta 11596586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 691 - 770
Target Start/End: Original strand, 31442396 - 31442474
Alignment:
Q  691 aacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||| ||||| ||||||||| ||||| ||| || |||||||||||||||||||| ||||||||||||||||| |||||    
T  31442396 aacccggtgcaccaaagctcccacatacacagtgtccgggaaggggtcccaccatt-ttggtgtattgtacgcatcctta 31442474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 688 - 770
Target Start/End: Original strand, 39214962 - 39215043
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| |||| |||||||||||| || ||||||||||||| ||||||||| ||||||||| ||||  |||||||||||||||||    
T  39214962 ggcagcccggtgcactaaagcttccacatacgcagggtttgggaaggggacccaccatt-ttggaatattgtacgcagcctta 39215043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 689 - 746
Target Start/End: Original strand, 4587568 - 4587625
Alignment:
Q  689 gcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccatt 746  Q
    |||||||| |||||| ||||||||||||| ||||||| ||||||||||||||||||||    
T  4587568 gcaacccggtgcactgaagctcccgcataggcagggtccgggaaggggtcccaccatt 4587625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 698 - 770
Target Start/End: Complemental strand, 47214653 - 47214583
Alignment:
Q  698 tgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||| |||||||||||| |||||||  ||||||||||||||||||  ||||||||||||||||| |||||    
T  47214653 tgcactagagctcccgcatatgcagggtctgggaaggggtcccaccat--ttggtgtattgtacgcaacctta 47214583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 683 - 770
Target Start/End: Complemental strand, 23796624 - 23796539
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| |||| |||| |||||||||||||| ||||| |||||||  ||||||||||| ||||||  ||||||||||||||||| |||||    
T  23796624 aaaagggcagcccggtgcactaaagctccagcatatgcagggtctgggaaggggtctcaccat--ttggtgtattgtacgcaacctta 23796539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 683 - 770
Target Start/End: Complemental strand, 35019388 - 35019304
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| |||| |||| ||||||||||||| ||||||||||||| || || |||||||||||||  |||||||||||||| |||||||||    
T  35019388 aaaatggcagcccggtgcactaaagctctcgcatacgcaggg-tctgggaggggtcccacca--attggtgtattgtatgcagcctta 35019304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 698 - 770
Target Start/End: Original strand, 45264413 - 45264484
Alignment:
Q  698 tgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||||||||||||||||| |||||||  | ||||||||||||||||| ||||||||||| || ||||||||    
T  45264413 tgcactaaagctcccgcatatgcagggtctgagaaggggtcccaccatt-ttggtgtattgcacacagcctta 45264484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 698 - 770
Target Start/End: Complemental strand, 50812084 - 50812014
Alignment:
Q  698 tgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||||||||||||||||||||  ||||||||||| |||||||| ||||||||||||||||| |||||    
T  50812084 tgcattaaagctcccgcatacgcagggcgcgggaaggggt-ccaccatt-ttggtgtattgtacgcaacctta 50812014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 682 - 764
Target Start/End: Original strand, 6983809 - 6983889
Alignment:
Q  682 taaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgca 764  Q
    ||||| |||| |||| ||||| |||||||| || |||||||||| ||| |||||||||||||||  |||||||||||||||||    
T  6983809 taaaagggcagcccggtgcaccaaagctcctgcctacgcagggtccggaaaggggtcccaccat--ttggtgtattgtacgca 6983889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 704 - 770
Target Start/End: Original strand, 44485129 - 44485193
Alignment:
Q  704 aaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||||||||||||| ||| | ||||||||||||| |||||  |||||||||||||||||||||||    
T  44485129 aaagctcccgcatacgtaggatccgggaaggggtccaaccat--ttggtgtattgtacgcagcctta 44485193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 698 - 763
Target Start/End: Original strand, 4249457 - 4249520
Alignment:
Q  698 tgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgc 763  Q
    |||| |||||||||||||||| || ||||||||||||| |||||||||  ||||||||||||||||    
T  4249457 tgcattaaagctcccgcatacacaaggttcgggaagggatcccaccat--ttggtgtattgtacgc 4249520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 698 - 763
Target Start/End: Original strand, 4249781 - 4249844
Alignment:
Q  698 tgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgc 763  Q
    |||| |||||||||||||||| || ||||||||||||| |||||||||  ||||||||||||||||    
T  4249781 tgcattaaagctcccgcatacacaaggttcgggaagggatcccaccat--ttggtgtattgtacgc 4249844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 698 - 763
Target Start/End: Original strand, 4250105 - 4250168
Alignment:
Q  698 tgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgc 763  Q
    |||| |||||||||||||||| || ||||||||||||| |||||||||  ||||||||||||||||    
T  4250105 tgcattaaagctcccgcatacacaaggttcgggaagggatcccaccat--ttggtgtattgtacgc 4250168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 700 - 766
Target Start/End: Complemental strand, 6358264 - 6358199
Alignment:
Q  700 cactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagc 766  Q
    |||||||| ||| |||||||||||||  ||||||||||||||||||| ||||||| |||||||||||    
T  6358264 cactaaagatcctgcatacgcagggtctgggaaggggtcccaccatt-ttggtgttttgtacgcagc 6358199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 698 - 744
Target Start/End: Original strand, 33594145 - 33594191
Alignment:
Q  698 tgcactaaagctcccgcatacgcagggttcgggaaggggtcccacca 744  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||    
T  33594145 tgcactaaagctcccgcatacgcagggtctgggaaggggtcccacca 33594191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 688 - 770
Target Start/End: Original strand, 15511152 - 15511235
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgta--cgcagcctta 770  Q
    |||| |||| ||||||||||||| | |||||||||||| | ||||||||| |||||||| |||||||||||||  ||||||||||    
T  15511152 ggcagcccggtgcactaaagctcacacatacgcagggtccaggaaggggtaccaccatt-ttggtgtattgtatccgcagcctta 15511235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 698 - 770
Target Start/End: Original strand, 17470361 - 17470430
Alignment:
Q  698 tgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||||||||| ||||||||||  || |||| ||||||||| ||| |||||||||||||||||||||||    
T  17470361 tgcactaaagctcccacatacgcagg--tcaggaacgggtcccactatt-ttggtgtattgtacgcagcctta 17470430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 693 - 746
Target Start/End: Complemental strand, 30555264 - 30555211
Alignment:
Q  693 cccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccatt 746  Q
    |||| ||||||||||||| |||||||||||||| || |||||||||||||||||    
T  30555264 cccggtgcactaaagctctcgcatacgcagggtccgtgaaggggtcccaccatt 30555211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 683 - 770
Target Start/End: Complemental strand, 8197202 - 8197117
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||||||| | ||||||||||||  |||||||||||| || |||||||||| |||||  |||||||| |||||| |||||||    
T  8197202 aaaagggcaacccggtacactaaagctccaacatacgcagggtccgagaaggggtcctaccat--ttggtgtactgtacgtagcctta 8197117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 681 - 769
Target Start/End: Original strand, 19974071 - 19974158
Alignment:
Q  681 ttaaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctt 769  Q
    |||||| |||| |||  |||||||||||||||||||||  || || |||||| |||||||| |||| ||||||||||||||||| ||||    
T  19974071 ttaaaagggcagccccgtgcactaaagctcccgcatacatagagtccgggaatgggtcccatcatt-ttggtgtattgtacgcaacctt 19974158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 707 - 770
Target Start/End: Original strand, 21910673 - 21910733
Alignment:
Q  707 gctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||| ||| |||||||||||||||||||||||||  ||||||||||||||||| |||||    
T  21910673 gctcccgca-acgtagggttcgggaaggggtcccaccat--ttggtgtattgtacgcaacctta 21910733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 698 - 738
Target Start/End: Original strand, 25554756 - 25554796
Alignment:
Q  698 tgcactaaagctcccgcatacgcagggttcgggaaggggtc 738  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  25554756 tgcactaatgctcccgcatacgcagggttcgggaaggggtc 25554796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 704 - 746
Target Start/End: Complemental strand, 30682950 - 30682908
Alignment:
Q  704 aaagctcccgcatacgcagggttcgggaaggggtcccaccatt 746  Q
    |||||||||||||||||| ||| ||||||||||||||||||||    
T  30682950 aaagctcccgcatacgcacggtccgggaaggggtcccaccatt 30682908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 699 - 767
Target Start/End: Original strand, 4430014 - 4430080
Alignment:
Q  699 gcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcc 767  Q
    |||||||||||||||||||| |||| | | | ||||||| |||||||  ||||||||||||||||||||    
T  4430014 gcactaaagctcccgcatacacaggatccagaaaggggttccaccat--ttggtgtattgtacgcagcc 4430080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 706 - 770
Target Start/End: Original strand, 25468285 - 25468347
Alignment:
Q  706 agctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||||||||||||||  |||||| ||||| |||||  ||||||||||||||||| |||||    
T  25468285 agctcccgcatacgcagggtctgggaagaggtccaaccat--ttggtgtattgtacgcaacctta 25468347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 683 - 731
Target Start/End: Original strand, 50760239 - 50760287
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcggga 731  Q
    |||| |||| |||| |||| |||||||||||||||||||||||||||||    
T  50760239 aaaagggcagcccggtgcattaaagctcccgcatacgcagggttcggga 50760287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 704 - 770
Target Start/End: Original strand, 18724565 - 18724629
Alignment:
Q  704 aaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||||||||||| | ||||| |||||||||||||||  ||  |||||||||||||| ||||||||    
T  18724565 aaagctcccgcatatgtagggtccgggaaggggtcccaagat--ttggtgtattgtacacagcctta 18724629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 698 - 767
Target Start/End: Complemental strand, 7074661 - 7074593
Alignment:
Q  698 tgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcc 767  Q
    |||||||||||||||| ||| |||||||   | ||| |||||||| ||| ||||||||||||||||||||    
T  7074661 tgcactaaagctcccggatatgcagggtctagaaagaggtcccacaatt-ttggtgtattgtacgcagcc 7074593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 708 - 764
Target Start/End: Complemental strand, 20036355 - 20036301
Alignment:
Q  708 ctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgca 764  Q
    |||| ||||||||||||| ||||||||||| |||||||  ||||||||||| |||||    
T  20036355 ctcctgcatacgcagggtccgggaaggggttccaccat--ttggtgtattgaacgca 20036301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 683 - 732
Target Start/End: Complemental strand, 22327255 - 22327206
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaa 732  Q
    ||||||||| |||| ||||| ||||||||||||||| ||| |||||||||    
T  22327255 aaaaaggcagcccggtgcaccaaagctcccgcatacacagagttcgggaa 22327206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 693 - 761
Target Start/End: Complemental strand, 23371271 - 23371206
Alignment:
Q  693 cccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtac 761  Q
    |||| |||||||||||| || ||||||||||| || ||||||||||||| |||  ||||||||||||||    
T  23371271 cccggtgcactaaagctaccacatacgcaggg-tctggaaggggtcccagcat--ttggtgtattgtac 23371206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 729 - 770
Target Start/End: Original strand, 27136696 - 27136736
Alignment:
Q  729 ggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||||||||||||||| ||||||||||||||||| |||||    
T  27136696 ggaaggggtcccaccatt-ttggtgtattgtacgcaacctta 27136736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 683 - 760
Target Start/End: Complemental strand, 43207655 - 43207579
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgta 760  Q
    |||| ||||| || |||||||||||||| |||||||  |||||  |||||| |||||||||| | |||||||||||||    
T  43207655 aaaatggcaaaccaatgcactaaagctctcgcatacatagggtctgggaagaggtcccaccaat-ttggtgtattgta 43207579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 6e-30; HSPs: 78)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 683 - 770
Target Start/End: Original strand, 20639657 - 20639743
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  20639657 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt-ttggtgtattgtacgcagcctta 20639743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 683 - 770
Target Start/End: Complemental strand, 23501925 - 23501838
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  23501925 aaaagggcaacccggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccattattggtgtattgtacgcaacctta 23501838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 688 - 770
Target Start/End: Complemental strand, 20225207 - 20225125
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||| |||||||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  20225207 ggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagcctta 20225125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 683 - 760
Target Start/End: Original strand, 33836486 - 33836563
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgta 760  Q
    |||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  33836486 aaaagggcaacccgttgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgta 33836563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 682 - 770
Target Start/End: Complemental strand, 16911701 - 16911613
Alignment:
Q  682 taaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||| ||||||||| |  |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  16911701 taaaagggcaacccggtaaactaaagctcccgcgtacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagcctta 16911613  T

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Target: chr4; HSP #6
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 698 - 770
Target Start/End: Original strand, 20908650 - 20908721
Alignment:
Q  698 tgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  20908650 tgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccatt-ttggtgtattgtacgcagcctta 20908721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 683 - 770
Target Start/End: Original strand, 13256398 - 13256485
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||||||| |||||||||||||||||| | || ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  13256398 aaaagggcaacccggtgcactaaagctcccgcagatgcggggttcgggaaggggtcccactattattggtgtattgtacgcagcctta 13256485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 688 - 770
Target Start/End: Original strand, 7909284 - 7909365
Alignment:
Q  688 ggcaacccgatgcactaaagctccc-gcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||    
T  7909284 ggcaacccgatgcactaaagctccccgcatacgcagggttcgggaaggggtcccaccat--ttggtgtattgtacgcaacctta 7909365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 683 - 770
Target Start/End: Original strand, 16408600 - 16408687
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||||||| |||||||||||||||||||| || |||| ||||||||||| ||||||||||||||||||||||||||| ||||    
T  16408600 aaaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggttccaccattattggtgtattgtacgcagtctta 16408687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 683 - 766
Target Start/End: Original strand, 30352579 - 30352662
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagc 766  Q
    |||| |||||| || |||||||||||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||    
T  30352579 aaaagggcaacacggtgcactaaagctcccgcatacgcagggtccgagaaggggtcccaccatttttggtgtattgtacgcagc 30352662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 688 - 767
Target Start/End: Original strand, 44363134 - 44363213
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcc 767  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||  ||||||||||||    
T  44363134 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttttggtgcgttgtacgcagcc 44363213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 688 - 770
Target Start/End: Complemental strand, 21647097 - 21647015
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||| |||||||||||||||||||| || ||||  ||||||||||||||||||||||||| |||||||||||||||||    
T  21647097 ggcaacccggtgcactaaagctcccgcatatgcggggtctgggaaggggtcccaccattattggtatattgtacgcagcctta 21647015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 683 - 770
Target Start/End: Complemental strand, 5648394 - 5648309
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||||||  |||||| ||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||    
T  5648394 aaaagggcaacccagtgcactgaagctcccgcatacgcagggtccgggaaggggtcccaccat--ttggtgtattgtacgcagcctta 5648309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 688 - 764
Target Start/End: Complemental strand, 20405220 - 20405144
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgca 764  Q
    |||||||| ||||||||||||||||||||| || |||| ||||||||||||||||||||||| ||||||||||||||    
T  20405220 ggcaacccaatgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattagtgtattgtacgca 20405144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 698 - 770
Target Start/End: Complemental strand, 54730373 - 54730301
Alignment:
Q  698 tgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||| ||||||||||||    
T  54730373 tgcactaaagctcccgcatacgcagggtccgggaaggggttccatcattattggtgtattatacgcagcctta 54730301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 688 - 770
Target Start/End: Original strand, 6430630 - 6430710
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||| ||| |||||||||||||||||||||||| ||||||| |||||||||||  |||||||||||||||||||||||    
T  6430630 ggcaacccggtgcgctaaagctcccgcatacgcagggtccgggaagtggtcccaccat--ttggtgtattgtacgcagcctta 6430710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 688 - 770
Target Start/End: Complemental strand, 20225113 - 20225033
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||| ||||||| |||||||||||| ||||||| |||||||||||||||||||  |||||||||||||||||||||||    
T  20225113 ggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccat--ttggtgtattgtacgcagcctta 20225033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 688 - 770
Target Start/End: Original strand, 29207902 - 29207982
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||| ||||||| |||||||||||| ||||||| |||||||||||||||||||  |||||||||||||||||||||||    
T  29207902 ggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccat--ttggtgtattgtacgcagcctta 29207982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 705 - 770
Target Start/End: Complemental strand, 49796911 - 49796848
Alignment:
Q  705 aagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  49796911 aagctcccgcatacgcagggttcgggaaggggtcccaccat--ttggtgtattgtacgcagcctta 49796848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 689 - 770
Target Start/End: Complemental strand, 21489218 - 21489138
Alignment:
Q  689 gcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||    
T  21489218 gcaacccagtgcacgaaagctcccgcatacgcagggttcgggaaggggtcccaccatt-ttggtgcattgtacgcagtctta 21489138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 698 - 770
Target Start/End: Original strand, 30690190 - 30690260
Alignment:
Q  698 tgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||| |||||||||    
T  30690190 tgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca--attggtgtattgtatgcagcctta 30690260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 688 - 749
Target Start/End: Original strand, 38755912 - 38755973
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattatt 749  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  38755912 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattatt 38755973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 683 - 770
Target Start/End: Complemental strand, 25629185 - 25629100
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||||||| |||||||||||||||||||| | ||||| |||||||||||||||||||  |||||||||||||| ||||||||    
T  25629185 aaaagggcaacccggtgcactaaagctcccgcatatgtagggtccgggaaggggtcccaccat--ttggtgtattgtacacagcctta 25629100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 683 - 770
Target Start/End: Complemental strand, 30639515 - 30639430
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||||||  |||||||||||||||||||| ||||||| |||||||||||| ||||||  |||||||||||||||||||||||    
T  30639515 aaaagggcaacccagtgcactaaagctcccgcatatgcagggtccgggaaggggtctcaccat--ttggtgtattgtacgcagcctta 30639430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 683 - 770
Target Start/End: Complemental strand, 35567306 - 35567221
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| |||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||  ||||||| |||||| ||||||||    
T  35567306 aaaagggcagcccggtgcactaaagctcccgcagacgcagggttcgggaaggggtcccaccat--ttggtgtgttgtacacagcctta 35567221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 683 - 770
Target Start/End: Complemental strand, 54175201 - 54175114
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttc-gggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| |||| |||| |||||||||||||||||||| ||||||| | ||||||||||||||||||| |||||||||||||||||||||||    
T  54175201 aaaagggcagcccggtgcactaaagctcccgcatatgcagggtccggggaaggggtcccaccatt-ttggtgtattgtacgcagcctta 54175114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 688 - 770
Target Start/End: Complemental strand, 40915959 - 40915879
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||| ||| |||||| ||||||||||||||||||||| ||||||||| |||||||||  |||||||||||||||||||||||    
T  40915959 ggcaatccggtgcactgaagctcccgcatacgcagggtccgggaagggctcccaccat--ttggtgtattgtacgcagcctta 40915879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 681 - 770
Target Start/End: Original strand, 51865035 - 51865122
Alignment:
Q  681 ttaaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||| ||||  ||| |||| ||||||||||||||||||||||| |||||||||| ||||||||  |||||||||||||||||||||||    
T  51865035 ttaaaagggcagtccggtgcaataaagctcccgcatacgcagggtccgggaaggggccccaccat--ttggtgtattgtacgcagcctta 51865122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 683 - 770
Target Start/End: Original strand, 9832312 - 9832397
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||||||| ||||||| || ||| ||||| ||||||| |||||||||||||||||||  |||||||||||||||||||||||    
T  9832312 aaaagggcaacccggtgcactagagttcctgcatatgcagggtccgggaaggggtcccaccat--ttggtgtattgtacgcagcctta 9832397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 683 - 770
Target Start/End: Complemental strand, 47444093 - 47444008
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||||||  |||||| ||||||| ||||| ||||||| |||||||||||||||||||  |||||||||||||||||||||||    
T  47444093 aaaagggcaacccagtgcactgaagctcctgcatatgcagggtccgggaaggggtcccaccat--ttggtgtattgtacgcagcctta 47444008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 683 - 770
Target Start/End: Original strand, 47528529 - 47528614
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||||||| ||||||| ||||||| ||||  |||||| |||||||||||||||||||  |||||||||||||||||||||||    
T  47528529 aaaagggcaacccggtgcactagagctcccacatattcagggtccgggaaggggtcccaccat--ttggtgtattgtacgcagcctta 47528614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 683 - 770
Target Start/End: Original strand, 48598824 - 48598909
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||||||| ||||||| |||||| ||||| ||| ||| |||||||||||||||||||  |||||||||||||||||||||||    
T  48598824 aaaagggcaacccggtgcactagagctccggcatatgcatggtccgggaaggggtcccaccat--ttggtgtattgtacgcagcctta 48598909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 703 - 770
Target Start/End: Complemental strand, 2813243 - 2813176
Alignment:
Q  703 taaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||||||||||||||||  ||||||||| ||||||||||||||||| |||||||||||||| ||||    
T  2813243 taaagctcccgcatacgcatcgttcgggaaagggtcccaccattattgatgtattgtacgcagtctta 2813176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 688 - 770
Target Start/End: Original strand, 8473624 - 8473706
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttc--gggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||| |||||||||||||||||||| |||||| ||  ||||||||||||||||||  ||||||||||||| |||||||||    
T  8473624 ggcaacccggtgcactaaagctcccgcatatgcaggggtccggggaaggggtcccaccat--ttggtgtattgtatgcagcctta 8473706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 688 - 746
Target Start/End: Complemental strand, 11394983 - 11394925
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccatt 746  Q
    ||||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  11394983 ggcaacccggtgcactaaagctcccgcatacgcagggtccggaaaggggtcccaccatt 11394925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 688 - 746
Target Start/End: Complemental strand, 11404710 - 11404652
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccatt 746  Q
    ||||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  11404710 ggcaacccggtgcactaaagctcccgcatacgcagggtccggaaaggggtcccaccatt 11404652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 683 - 745
Target Start/End: Complemental strand, 32484369 - 32484307
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccat 745  Q
    |||| ||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||    
T  32484369 aaaagggcaacccggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccat 32484307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 688 - 745
Target Start/End: Original strand, 40553941 - 40553998
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccat 745  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||    
T  40553941 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcacaccat 40553998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 688 - 767
Target Start/End: Complemental strand, 10660537 - 10660458
Alignment:
Q  688 ggcaacccgatgcact-aaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcc 767  Q
    |||||||||||||||| ||||||||||||||||||||  | || |||||||| ||||||||||||||||||||| ||||||    
T  10660537 ggcaacccgatgcacttaaagctcccgcatacgcaggtcttgg-aaggggtctcaccattattggtgtattgtatgcagcc 10660458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 688 - 767
Target Start/End: Complemental strand, 10874682 - 10874603
Alignment:
Q  688 ggcaacccgatgcact-aaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcc 767  Q
    |||||||||||||||| ||||||||||||||||||||  | || |||||||| ||||||||||||||||||||| ||||||    
T  10874682 ggcaacccgatgcacttaaagctcccgcatacgcaggtcttgg-aaggggtctcaccattattggtgtattgtatgcagcc 10874603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 683 - 770
Target Start/End: Original strand, 11054147 - 11054232
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||||||| ||||||| |||||||||||| ||||||| ||||||||||| || ||||  |||||||||||||||||| ||||    
T  11054147 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggttccgccat--ttggtgtattgtacgcagtctta 11054232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 683 - 767
Target Start/End: Original strand, 36816383 - 36816466
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcc 767  Q
    |||| ||||||||| | ||||||||||||||||||| |||||| | |||||| |||||||| || ||||||||||||||||||||    
T  36816383 aaaagggcaacccggtacactaaagctcccgcatacacagggtccaggaaggagtcccacc-tttttggtgtattgtacgcagcc 36816466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 683 - 770
Target Start/End: Original strand, 5306659 - 5306748
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccg----catacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||||||| |||| |||||||||||    |||||||||||| |||||||||||||||||||  ||||||||||||||||| |||||    
T  5306659 aaaagggcaacccggtgcattaaagctcccgtccacatacgcagggtccgggaaggggtcccaccat--ttggtgtattgtacgcaacctta 5306748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 700 - 770
Target Start/End: Complemental strand, 14983953 - 14983885
Alignment:
Q  700 cactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||||||||||||||||||||||| |||||||||||||||||||  || |||||||||| ||| |||||    
T  14983953 cactaaagctcccgcatacgcagggtccgggaaggggtcccaccat--ttagtgtattgtaggcaacctta 14983885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 683 - 746
Target Start/End: Complemental strand, 38786745 - 38786682
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccatt 746  Q
    |||| ||||||||| ||||||| |||||||||||| ||||||| ||||||||||||||||||||    
T  38786745 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatt 38786682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 691 - 770
Target Start/End: Original strand, 48327770 - 48327849
Alignment:
Q  691 aacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||| ||||||||| || ||||||| |  |||||||||||| |||||||||||||||||||||||||| |||| ||||    
T  48327770 aacccggtgcactaaaacttccgcatatgtggggttcgggaagaggtcccaccattattggtgtattgtatgcagtctta 48327849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 688 - 746
Target Start/End: Complemental strand, 25388307 - 25388249
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccatt 746  Q
    ||||||||| |||||||||||||  ||||||||||||| ||||||||||||||||||||    
T  25388307 ggcaacccggtgcactaaagctcatgcatacgcagggtccgggaaggggtcccaccatt 25388249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 698 - 752
Target Start/End: Original strand, 47482864 - 47482918
Alignment:
Q  698 tgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggt 752  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||||| |||||    
T  47482864 tgcaccaaagctcccgcatacgcagggtccgggaaggggtcccaccatttttggt 47482918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 698 - 770
Target Start/End: Complemental strand, 19027969 - 19027899
Alignment:
Q  698 tgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||||||||| ||||||||| ||  || ||||||||||||||  ||||||||||||||||||||||||    
T  19027969 tgcactaaagctcccacatacgcagagtctggaaaggggtcccacca--attggtgtattgtacgcagcctta 19027899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 683 - 770
Target Start/End: Original strand, 9987833 - 9987918
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||| |||| |||| ||||||||||||||| ||| |||   |||||||||||||||||  ||||||||||||| |||||||||    
T  9987833 aaaaaggcagcccggtgcattaaagctcccgcatatgcaaggtcaaggaaggggtcccaccat--ttggtgtattgtatgcagcctta 9987918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 703 - 770
Target Start/End: Original strand, 17043413 - 17043478
Alignment:
Q  703 taaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||| ||||| |||||||  ||||||||||||||||||  |||||||||||||||||||||||    
T  17043413 taaagctccagcatatgcagggtctgggaaggggtcccaccat--ttggtgtattgtacgcagcctta 17043478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 683 - 734
Target Start/End: Complemental strand, 35532128 - 35532077
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaagg 734  Q
    |||| ||||||||| |||||||||||||||||||||||||||| ||||||||    
T  35532128 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaagg 35532077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 702 - 761
Target Start/End: Original strand, 49938611 - 49938669
Alignment:
Q  702 ctaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtac 761  Q
    |||||||||||||||| |||||||  ||||||||||||||||||| ||||||||||||||    
T  49938611 ctaaagctcccgcatatgcagggtatgggaaggggtcccaccatt-ttggtgtattgtac 49938669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 700 - 766
Target Start/End: Complemental strand, 16494338 - 16494272
Alignment:
Q  700 cactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagc 766  Q
    |||||||||| |||||||| ||||||  ||||| ||||||||||||| ||||||||||||| |||||    
T  16494338 cactaaagcttccgcatacacagggtctgggaaagggtcccaccatttttggtgtattgtatgcagc 16494272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 704 - 769
Target Start/End: Complemental strand, 25463237 - 25463174
Alignment:
Q  704 aaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctt 769  Q
    |||||||||||||| ||||||| |||||||||||||||||||  ||||||| ||||||||| ||||    
T  25463237 aaagctcccgcatatgcagggtccgggaaggggtcccaccat--ttggtgtgttgtacgcaacctt 25463174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 700 - 770
Target Start/End: Original strand, 30581481 - 30581550
Alignment:
Q  700 cactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||||||  |||| ||||||| |||||||||||||||||||| |||||||||||||| || |||||    
T  30581481 cactaaagctcctacatatgcagggtccgggaaggggtcccaccatt-ttggtgtattgtacacaccctta 30581550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 683 - 749
Target Start/End: Original strand, 50555655 - 50555721
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattatt 749  Q
    |||| |||| |||| ||||||||| |||| ||||||||||||| ||||||||||| |||||||||||    
T  50555655 aaaagggcagcccggtgcactaaaactcctgcatacgcagggtccgggaaggggttccaccattatt 50555721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 696 - 749
Target Start/End: Complemental strand, 8820631 - 8820578
Alignment:
Q  696 gatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattatt 749  Q
    ||||||||||| ||| ||||||||||||||  ||||||||||||||||||||||    
T  8820631 gatgcactaaaactctcgcatacgcagggtctgggaaggggtcccaccattatt 8820578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 688 - 745
Target Start/End: Complemental strand, 44718698 - 44718641
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccat 745  Q
    ||||||||| ||  ||||||||||||||||||||||||  ||||||||||||||||||    
T  44718698 ggcaacccggtgtgctaaagctcccgcatacgcagggtctgggaaggggtcccaccat 44718641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 702 - 770
Target Start/End: Original strand, 39029078 - 39029145
Alignment:
Q  702 ctaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||||||||||||| ||||||| ||| ||| |||||||||||| || ||||||||||| ||||||||    
T  39029078 ctaaagctcccgcatatgcagggtccggaaagtggtcccaccatt-ttcgtgtattgtacacagcctta 39029145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 683 - 770
Target Start/End: Original strand, 39077795 - 39077880
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||||||||||| ||||||| |||||||||||| ||||||| ||| |||  ||| ||||||  ||||| ||||||||||| |||||    
T  39077795 aaaaaggcaacccggtgcactagagctcccgcatatgcagggtccggaaagatgtctcaccat--ttggtatattgtacgcaacctta 39077880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 683 - 746
Target Start/End: Complemental strand, 28494287 - 28494224
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccatt 746  Q
    ||||||||| |||| ||||||| |||||||||||| ||||| |  |||||||||||||||||||    
T  28494287 aaaaaggcagcccggtgcactagagctcccgcatatgcaggatctgggaaggggtcccaccatt 28494224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 688 - 755
Target Start/End: Complemental strand, 36589875 - 36589809
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgta 755  Q
    |||| |||| ||||| |||||||||||||||  ||||||| |||||||||||||||||| ||||||||    
T  36589875 ggcagcccggtgcaccaaagctcccgcatacatagggttcaggaaggggtcccaccatt-ttggtgta 36589809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 688 - 770
Target Start/End: Original strand, 55766470 - 55766550
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| |||| ||||||||||||| |||||||||| ||| ||||| ||||| |||||||  |  ||||||||||||||||||||    
T  55766470 ggcatcccggtgcactaaagctctcgcatacgcaaggtccgggatggggttccaccat--tcagtgtattgtacgcagcctta 55766550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 704 - 746
Target Start/End: Original strand, 32478811 - 32478853
Alignment:
Q  704 aaagctcccgcatacgcagggttcgggaaggggtcccaccatt 746  Q
    ||||||||||||||||| |||| ||||||||||||||||||||    
T  32478811 aaagctcccgcatacgctgggtccgggaaggggtcccaccatt 32478853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 697 - 770
Target Start/End: Complemental strand, 37494973 - 37494902
Alignment:
Q  697 atgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||||||||| ||||||||||||| | | |||||||||||||||  ||||| ||||||| ||| |||||    
T  37494973 atgcactaaagctcctgcatacgcagggtcccgaaaggggtcccaccat--ttggtatattgtatgcaacctta 37494902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 682 - 762
Target Start/End: Complemental strand, 7038189 - 7038111
Alignment:
Q  682 taaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacg 762  Q
    ||||| ||||||||  |||||||||||| ||| ||||||||||| |||| ||| | ||||||||| |||||||||||||||    
T  7038189 taaaagggcaacccagtgcactaaagct-ccgtatacgcagggtccgggtaggtgccccaccatt-ttggtgtattgtacg 7038111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 683 - 770
Target Start/End: Original strand, 10277756 - 10277841
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||| ||| | ||||| | |||||||||| |||||||  ||||||||||  |||||||  ||||||||||||||||||||||    
T  10277756 aaaagggcaatccggttcactagaactcccgcatatgcagggtctgggaaggggtttcaccatt--tggtgtattgtacgcagcctta 10277841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 702 - 770
Target Start/End: Complemental strand, 25343306 - 25343238
Alignment:
Q  702 ctaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||| | |||||||||| |   ||||||||||| ||| || |||||||||||||||||||||||    
T  25343306 ctaaagctctcacatacgcaggatctaggaaggggtccaaccctttttggtgtattgtacgcagcctta 25343238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 698 - 733
Target Start/End: Original strand, 37038137 - 37038172
Alignment:
Q  698 tgcactaaagctcccgcatacgcagggttcgggaag 733  Q
    |||||||||||||||||||||||||||| |||||||    
T  37038137 tgcactaaagctcccgcatacgcagggtacgggaag 37038172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 704 - 770
Target Start/End: Original strand, 47441550 - 47441614
Alignment:
Q  704 aaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||||| || ||| |||||| ||||||||||||| |||||  |||||||||||||| ||||||||    
T  47441550 aaagctcctgcttactcagggtccgggaaggggtccaaccat--ttggtgtattgtacacagcctta 47441614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 704 - 746
Target Start/End: Complemental strand, 54967135 - 54967093
Alignment:
Q  704 aaagctcccgcatacgcagggttcgggaaggggtcccaccatt 746  Q
    |||||||||||||| | ||||| ||||||||||||||||||||    
T  54967135 aaagctcccgcatatgtagggtacgggaaggggtcccaccatt 54967093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 683 - 744
Target Start/End: Complemental strand, 19028047 - 19027986
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccacca 744  Q
    |||| |||| |||| |||||||||||||||||||| |  |||| |||||||| |||||||||    
T  19028047 aaaagggcagcccggtgcactaaagctcccgcataagtggggtccgggaaggagtcccacca 19027986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 698 - 770
Target Start/End: Original strand, 30496336 - 30496406
Alignment:
Q  698 tgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||||||||  |||| ||| ||| |||||||| ||||| ||||  ||||||||||||| |||||||||    
T  30496336 tgcactaaagctccatcataagcacggtccgggaaggagtccccccat--ttggtgtattgtatgcagcctta 30496406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 727 - 764
Target Start/End: Original strand, 35894504 - 35894540
Alignment:
Q  727 cgggaaggggtcccaccattattggtgtattgtacgca 764  Q
    |||||||||||||||||||| |||||||||||||||||    
T  35894504 cgggaaggggtcccaccatt-ttggtgtattgtacgca 35894540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 698 - 770
Target Start/End: Original strand, 41018808 - 41018878
Alignment:
Q  698 tgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||||| ||  |||||||| |||  ||||||||||||||| ||  ||||||||||||||| |||||||    
T  41018808 tgcactaaagcccctccatacgcaaggtctgggaaggggtcccactat--ttggtgtattgtacgtagcctta 41018878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 697 - 734
Target Start/End: Complemental strand, 48202432 - 48202395
Alignment:
Q  697 atgcactaaagctcccgcatacgcagggttcgggaagg 734  Q
    |||||||||||||||||||||||| |||||||| ||||    
T  48202432 atgcactaaagctcccgcatacgcggggttcggtaagg 48202395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 698 - 766
Target Start/End: Original strand, 55830735 - 55830801
Alignment:
Q  698 tgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagc 766  Q
    ||||||||||||| |||||||||| ||| ||||| ||||| |||||||  |  ||||||||||||||||    
T  55830735 tgcactaaagctctcgcatacgcaaggtccgggatggggttccaccat--tcagtgtattgtacgcagc 55830801  T

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Target: chr7 (Bit Score: 64; Significance: 1e-27; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 683 - 770
Target Start/End: Complemental strand, 42805662 - 42805575
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||||||| |||||||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  42805662 aaaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacacagcctta 42805575  T

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Target: chr7; HSP #2
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 688 - 770
Target Start/End: Complemental strand, 47716592 - 47716510
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||| ||||| |||||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  47716592 ggcaacccggtgcaccaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagcctta 47716510  T

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Target: chr7; HSP #3
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 683 - 770
Target Start/End: Complemental strand, 7879774 - 7879689
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||||||| |||||| ||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||    
T  7879774 aaaagggcaacccggtgcactgaagctcccgcatacgcagggtccgggaaggggtcccaccat--ttggtgtattgtacgcagcctta 7879689  T

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Target: chr7; HSP #4
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 683 - 770
Target Start/End: Complemental strand, 43557611 - 43557523
Alignment:
Q  683 aaaaaggcaacccgatgcactaaa-gctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||||||| ||||||||| |||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||    
T  43557611 aaaagggcaacccggtgcactaaaagctcccgcatacgcagagtccgggagggggtcccaccattattggtgtattgtacgcagcctta 43557523  T

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Target: chr7; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 681 - 770
Target Start/End: Original strand, 21172006 - 21172093
Alignment:
Q  681 ttaaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||| ||||||||| ||||||| |||||||||||| ||||||| |||||||||||||||||||  |||||||||||||||||||||||    
T  21172006 ttaaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccat--ttggtgtattgtacgcagcctta 21172093  T

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Target: chr7; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 683 - 770
Target Start/End: Original strand, 34626207 - 34626292
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| |||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||  ||||||||||| |||||||||||    
T  34626207 aaaagggcaacccgatgaactaaagctcccgcatacgcagggtccgggaagggatcccaccat--ttggtgtattgaacgcagcctta 34626292  T

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Target: chr7; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 683 - 770
Target Start/End: Original strand, 42391099 - 42391184
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||||||| ||||||| |||||||||||| ||||||| |||||||||||||||||||  |||||||||||||||||||||||    
T  42391099 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccat--ttggtgtattgtacgcagcctta 42391184  T

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Target: chr7; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 683 - 770
Target Start/End: Complemental strand, 42798805 - 42798720
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||||||||||||||| |||||||||||| ||||||| |||||| ||||||||||||  |||||||||||||||||||||||    
T  42798805 aaaagggcaacccgatgcactatagctcccgcatatgcagggtccgggaaagggtcccaccat--ttggtgtattgtacgcagcctta 42798720  T

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Target: chr7; HSP #9
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 688 - 770
Target Start/End: Complemental strand, 18747618 - 18747538
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||| ||||||||||||    
T  18747618 ggcagcccggtgcactaaagctcccgcatacgcagggttcaggaaggggtcccacca--attggtgtattatacgcagcctta 18747538  T

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Target: chr7; HSP #10
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 683 - 769
Target Start/End: Original strand, 27889315 - 27889399
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctt 769  Q
    |||| ||||||||| || || |||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||    
T  27889315 aaaagggcaacccggtgtaccaaagctcccgcatacgcagggtccgggaaggggtcccaccat--ttggtgtattgtacgcagcctt 27889399  T

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Target: chr7; HSP #11
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 688 - 770
Target Start/End: Original strand, 48735126 - 48735206
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||| ||||||| |||||||||||| ||||||| |||||||||||||||||||  |||||||||||||||||||||||    
T  48735126 ggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccat--ttggtgtattgtacgcagcctta 48735206  T

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Target: chr7; HSP #12
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 683 - 765
Target Start/End: Complemental strand, 21566572 - 21566491
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcag 765  Q
    ||||||| | |||| |||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||    
T  21566572 aaaaaggtagcccggtgcactaaagctcccgcatatgcagggttcgggaaggggtcctaccatt-ttggtgtattgtacgcag 21566491  T

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Target: chr7; HSP #13
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 691 - 770
Target Start/End: Original strand, 2541026 - 2541103
Alignment:
Q  691 aacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||| |||||||||||||||||||||||||||  |||||||||||||||||||  ||||||||| |||||||||||||    
T  2541026 aacccggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccat--ttggtgtatagtacgcagcctta 2541103  T

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Target: chr7; HSP #14
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 683 - 770
Target Start/End: Complemental strand, 32758395 - 32758310
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||||||| ||||||| |||||||||||| ||||||| |||||||||||||||||||  |||||||||||||| ||||||||    
T  32758395 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccat--ttggtgtattgtacacagcctta 32758310  T

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Target: chr7; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 688 - 770
Target Start/End: Original strand, 10693077 - 10693157
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||  ||||||| |||||||||||| ||||||| |||||||||||||||||||  |||||||||||||||||||||||    
T  10693077 ggcaacccagtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccat--ttggtgtattgtacgcagcctta 10693157  T

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Target: chr7; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 688 - 770
Target Start/End: Original strand, 18512457 - 18512537
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||  ||||| |||||||||||||||||||||| |||||||||||||||||||  | |||||||||||||||||||||    
T  18512457 ggcaacccagtgcaccaaagctcccgcatacgcagggtccgggaaggggtcccaccat--tcggtgtattgtacgcagcctta 18512537  T

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Target: chr7; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 684 - 770
Target Start/End: Original strand, 33871910 - 33871994
Alignment:
Q  684 aaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||||| | ||||||||||||| ||||||| ||||||  ||||||||||||||||||  |||||||||||||||||||||||    
T  33871910 aaaaggcaacctggtgcactaaagctctcgcatacacagggtctgggaaggggtcccaccat--ttggtgtattgtacgcagcctta 33871994  T

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Target: chr7; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 698 - 769
Target Start/End: Complemental strand, 39124016 - 39123945
Alignment:
Q  698 tgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctt 769  Q
    ||||| ||||||||| |||||||||||| |||||||||||||||||||| |||||||||| |||||||||||    
T  39124016 tgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 39123945  T

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Target: chr7; HSP #19
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 681 - 770
Target Start/End: Complemental strand, 40464014 - 40463927
Alignment:
Q  681 ttaaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||| |||||| || |||||| ||||||||||||||||||||| || ||||||||||||||||  |||||||||| ||||||||||||    
T  40464014 ttaaaagggcaactcggtgcactgaagctcccgcatacgcagggtccgagaaggggtcccaccat--ttggtgtattatacgcagcctta 40463927  T

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Target: chr7; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 688 - 769
Target Start/End: Original strand, 45018927 - 45019010
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccacca--ttattggtgtattgtacgcagcctt 769  Q
    ||||||| | |||||||||||||||||||||||||||| ||||||||||| ||||||  || ||||| ||||||||||||||||    
T  45018927 ggcaacctggtgcactaaagctcccgcatacgcagggtccgggaaggggttccaccagttttttggtatattgtacgcagcctt 45019010  T

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Target: chr7; HSP #21
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 688 - 770
Target Start/End: Original strand, 11617592 - 11617672
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||| |||||||||| ||| ||||||||||||| | |||||||||||||||||  |||||||||||||||||| ||||    
T  11617592 ggcaacccggtgcactaaaggtcctgcatacgcagggtccaggaaggggtcccaccat--ttggtgtattgtacgcagtctta 11617672  T

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Target: chr7; HSP #22
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 688 - 770
Target Start/End: Complemental strand, 29907549 - 29907470
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||| ||||||||||||||||||||  |||||| ||||| |||||||||||||| ||||||||||| |||||||||||    
T  29907549 ggcaacccggtgcactaaagctcccgcata--cagggtccgggatggggtcccaccatt-ttggtgtattgaacgcagcctta 29907470  T

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Target: chr7; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 683 - 760
Target Start/End: Original strand, 38262195 - 38262270
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgta 760  Q
    |||| ||||| ||| ||||||||||||||||||||||||| |||||||||||||||||| |||  |||||||||||||    
T  38262195 aaaagggcaatccggtgcactaaagctcccgcatacgcagtgttcgggaaggggtcccatcat--ttggtgtattgta 38262270  T

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Target: chr7; HSP #24
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 698 - 770
Target Start/End: Complemental strand, 23231678 - 23231608
Alignment:
Q  698 tgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||||||||| ||||||||||||||||||||||||||||||| |||  | |||||||| ||||||||||||    
T  23231678 tgcactaaagctgccgcatacgcagggttcgggaaggggtcccatcat--tcggtgtattatacgcagcctta 23231608  T

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Target: chr7; HSP #25
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 682 - 770
Target Start/End: Original strand, 31591107 - 31591193
Alignment:
Q  682 taaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||| ||||||||| ||||||| |||||||||||| ||| ||| |||||||||||||||||||  ||  |||||||||||||||||||    
T  31591107 taaaagggcaacccggtgcactagagctcccgcatatgcaaggtccgggaaggggtcccaccat--ttattgtattgtacgcagcctta 31591193  T

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Target: chr7; HSP #26
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 682 - 770
Target Start/End: Original strand, 35787267 - 35787353
Alignment:
Q  682 taaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||| ||||||||| |||| | ||||||||||||||||| ||| |||||||||||||| ||||  ||||||||||||||||| |||||    
T  35787267 taaaagggcaacccggtgcattgaagctcccgcatacgcaaggtccgggaaggggtcccgccat--ttggtgtattgtacgcaacctta 35787353  T

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Target: chr7; HSP #27
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 713 - 770
Target Start/End: Complemental strand, 46354302 - 46354245
Alignment:
Q  713 gcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||| || |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  46354302 gcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagcctta 46354245  T

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Target: chr7; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 691 - 770
Target Start/End: Original strand, 22698974 - 22699054
Alignment:
Q  691 aacccgatgcactaaagctcccgcatacgcagggttcgggaag-gggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||| ||||||| ||||||||||||| |||||| ||||||  ||||||||||||| |||||||||||||||||| ||||    
T  22698974 aacccggtgcactatagctcccgcatacacagggtccgggaaaagggtcccaccatttttggtgtattgtacgcagtctta 22699054  T

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Target: chr7; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 691 - 770
Target Start/End: Original strand, 35334823 - 35334900
Alignment:
Q  691 aacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||| |||||||||||||| ||||||||||||| |||||||||||||||||||  | |||||||||||| ||| ||||    
T  35334823 aacccggtgcactaaagctcctgcatacgcagggtccgggaaggggtcccaccat--tcggtgtattgtacacagtctta 35334900  T

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Target: chr7; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 703 - 770
Target Start/End: Complemental strand, 38604642 - 38604577
Alignment:
Q  703 taaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||||||||||||||||| ||| |||||||| ||||||  |||||||||||||||||||||||    
T  38604642 taaagctcccgcatacgcagggtccggaaaggggtctcaccat--ttggtgtattgtacgcagcctta 38604577  T

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Target: chr7; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 699 - 770
Target Start/End: Complemental strand, 33500635 - 33500564
Alignment:
Q  699 gcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||| ||| ||||||||||||||||| |||||||||||||||||||| || |||||| |||||||| ||||    
T  33500635 gcactgaagatcccgcatacgcagggtccgggaaggggtcccaccattttttgtgtatagtacgcagtctta 33500564  T

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Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 705 - 770
Target Start/End: Complemental strand, 19266564 - 19266501
Alignment:
Q  705 aagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||||||||||||||| ||||||||| |||||| ||  |||||||||||||||||||||||    
T  19266564 aagctcccgcatacgcagggtccgggaagggatcccacaat--ttggtgtattgtacgcagcctta 19266501  T

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Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 683 - 764
Target Start/End: Original strand, 47077854 - 47077933
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgca 764  Q
    |||||||||| ||| ||||||| |||||||||||| | |||||| ||||||||||||||||||  || ||||||||||||||    
T  47077854 aaaaaggcaatccggtgcactagagctcccgcatatgtagggtttgggaaggggtcccaccat--tttgtgtattgtacgca 47077933  T

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Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 699 - 764
Target Start/End: Original strand, 3469190 - 3469255
Alignment:
Q  699 gcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgca 764  Q
    |||||||||||||||||||| ||||||   |||||||||||| ||||| |||||||||||||||||    
T  3469190 gcactaaagctcccgcatacacagggtctaggaaggggtcccgccatttttggtgtattgtacgca 3469255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 683 - 770
Target Start/End: Complemental strand, 1408593 - 1408508
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||||||| ||| || ||||||| | | ||||||||||||| |||||||||||||||||||  ||| |||||||||| ||||||||    
T  1408593 aaaaaggcaatccggtgaactaaagattctgcatacgcagggtccgggaaggggtcccaccat--ttgctgtattgtacacagcctta 1408508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 698 - 770
Target Start/End: Original strand, 14732835 - 14732906
Alignment:
Q  698 tgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||||||||||||||  ||||||||||||||| ||  ||||||| ||||||||||| |||||||||||    
T  14732835 tgcactaaagctcccgcataaacagggttcgggaaggagtttcaccatttttggtgtattg-acgcagcctta 14732906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 683 - 770
Target Start/End: Complemental strand, 19265949 - 19265865
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| |||| |||| ||||||||||||||| |||| | ||| | ||||||||||||||||||||  ||||||||||||||||||||||    
T  19265949 aaaagggcagcccggtgcactaaagctcccacatatgtagg-tccgggaaggggtcccaccatt--tggtgtattgtacgcagcctta 19265865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 683 - 770
Target Start/End: Complemental strand, 27629770 - 27629685
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||||||| |||||| ||||| ||||||| ||||||  |||||||||||||||||||  |||||||||| |||||| |||||    
T  27629770 aaaagggcaacccggtgcactgaagctaccgcatatgcagggcccgggaaggggtcccaccat--ttggtgtattttacgcaacctta 27629685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 698 - 768
Target Start/End: Original strand, 36267831 - 36267900
Alignment:
Q  698 tgcactaaagctcccgcatacgcagggttcggg-aaggggtcccaccattattggtgtattgtacgcagcct 768  Q
    ||||||||||||||||||||| ||||||||||| || |||||| |||||  |||||||||||||||||||||    
T  36267831 tgcactaaagctcccgcatacacagggttcgggaaatgggtccaaccat--ttggtgtattgtacgcagcct 36267900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 688 - 770
Target Start/End: Complemental strand, 11741924 - 11741844
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||| ||||||| |||||||||||  ||||  | ||||||||| |||||||||  |||||||||||||||||||||||    
T  11741924 ggcaacccggtgcactagagctcccgcatgtgcagaatccgggaagggatcccaccat--ttggtgtattgtacgcagcctta 11741844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 704 - 770
Target Start/End: Complemental strand, 13805216 - 13805152
Alignment:
Q  704 aaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||||||||||||||||||| | ||||| |||||||||||  |||||||||||||| ||||||||    
T  13805216 aaagctcccgcatacgcagggtccaggaagtggtcccaccat--ttggtgtattgtacacagcctta 13805152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 708 - 770
Target Start/End: Original strand, 14099030 - 14099090
Alignment:
Q  708 ctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||||| |||||||||||||||||||||||||  |||||||||||||||||| ||||    
T  14099030 ctcctgcatacgtagggttcgggaaggggtcccaccat--ttggtgtattgtacgcagtctta 14099090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 708 - 770
Target Start/End: Original strand, 14409047 - 14409107
Alignment:
Q  708 ctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||||| |||||||||||||||||||||||||  |||||||||||||||||| ||||    
T  14409047 ctcctgcatacgtagggttcgggaaggggtcccaccat--ttggtgtattgtacgcagtctta 14409107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 688 - 770
Target Start/End: Original strand, 23419678 - 23419758
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| |||||||||||||||| |||||| ||||| |||   |||||||||||||||||  |||||||||||||||||| ||||    
T  23419678 ggcagcccgatgcactaaagcccccgcacacgcaaggtctaggaaggggtcccaccat--ttggtgtattgtacgcagtctta 23419758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 703 - 770
Target Start/End: Complemental strand, 35203557 - 35203490
Alignment:
Q  703 taaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||||||||||| || |||| ||||||| |||||||||| ||||| |||||||||||| ||||    
T  35203557 taaagctcccgcatacgtagagttcaggaagggatcccaccatttttggtatattgtacgcagtctta 35203490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 698 - 770
Target Start/End: Original strand, 13792164 - 13792235
Alignment:
Q  698 tgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||| |||||||| |||||||||||||||| ||||||||||| ||||| | ||||||||||| |||| ||||    
T  13792164 tgcacaaaagctccagcatacgcagggttcgagaaggggtcccgccatt-tgggtgtattgtatgcagtctta 13792235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 683 - 770
Target Start/End: Original strand, 19426889 - 19426973
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||||||| |||||| |||||| |||||| ||||||| || |||||| ||||||||||  ||||||||||||||||| ||||    
T  19426889 aaaagggcaacccggtgcactgaagctctcgcatatgcagggtccgagaaggg-tcccaccatt--tggtgtattgtacgcagtctta 19426973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 698 - 746
Target Start/End: Original strand, 21139762 - 21139810
Alignment:
Q  698 tgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccatt 746  Q
    |||||||||||| |||||||| ||| |||||||||||||||||||||||    
T  21139762 tgcactaaagcttccgcatacacagagttcgggaaggggtcccaccatt 21139810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 704 - 770
Target Start/End: Original strand, 28362165 - 28362229
Alignment:
Q  704 aaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||| |||| ||| |||  ||||||||||||||||||  |||||||||||||||||||||||    
T  28362165 aaagctcccacatatgcaaggtctgggaaggggtcccaccat--ttggtgtattgtacgcagcctta 28362229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 688 - 770
Target Start/End: Complemental strand, 42477002 - 42476922
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||| | ||||||| |||||||||||| |||| |    ||||||||||||||||||  ||||||||||||||||||||||    
T  42477002 ggcaacctggtgcactagagctcccgcatatgcagagcctaggaaggggtcccaccatt--tggtgtattgtacgcagcctta 42476922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 683 - 725
Target Start/End: Complemental strand, 36602583 - 36602541
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggt 725  Q
    |||| ||||||||| ||||||||||||||||||||||||||||    
T  36602583 aaaagggcaacccggtgcactaaagctcccgcatacgcagggt 36602541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 698 - 735
Target Start/End: Original strand, 42495876 - 42495913
Alignment:
Q  698 tgcactaaagctcccgcatacgcagggttcgggaaggg 735  Q
    |||||||||||||||||||||||||||| |||||||||    
T  42495876 tgcactaaagctcccgcatacgcagggtccgggaaggg 42495913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 703 - 758
Target Start/End: Original strand, 28078151 - 28078204
Alignment:
Q  703 taaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattg 758  Q
    |||||||| |||||| ||||| |||||||||||||||||||||  |||||||||||    
T  28078151 taaagctctcgcatatgcaggattcgggaaggggtcccaccat--ttggtgtattg 28078204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 696 - 770
Target Start/End: Original strand, 8148958 - 8149029
Alignment:
Q  696 gatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||||| ||| |||||||||| |  | ||||||||||||||||||  ||||||||||||||||| |||||    
T  8148958 gatgcactaaaactctcgcatacgcaagtct-gggaaggggtcccaccat--ttggtgtattgtacgcaacctta 8149029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 683 - 746
Target Start/End: Original strand, 23618976 - 23619039
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccatt 746  Q
    |||| ||||||||| |||||||||||||| ||| ||||| |||  | |||||||||||||||||    
T  23618976 aaaagggcaacccgctgcactaaagctcctgcaaacgcaaggtctgcgaaggggtcccaccatt 23619039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 709 - 763
Target Start/End: Complemental strand, 7645066 - 7645014
Alignment:
Q  709 tcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgc 763  Q
    |||||||||||||||| || |||||||||||||| ||| ||||||||||||||||    
T  7645066 tcccgcatacgcaggg-tcaggaaggggtcccacaatt-ttggtgtattgtacgc 7645014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 688 - 770
Target Start/End: Complemental strand, 16341410 - 16341329
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| |||| ||||| |||||||||||||| |   ||| ||||||| || ||||||||| ||||||||||||||| |||||||    
T  16341410 ggcagcccggtgcaccaaagctcccgcatatgataggtccgggaagagggcccaccatt-ttggtgtattgtacgtagcctta 16341329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 706 - 770
Target Start/End: Original strand, 2662958 - 2663019
Alignment:
Q  706 agctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||||||||| ||||||| | | || |||||||||||||  ||||||||||||||||||||||    
T  2662958 agctcccgcatatgcagggt-ctgaaaagggtcccaccatt--tggtgtattgtacgcagcctta 2663019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 699 - 744
Target Start/End: Original strand, 42101899 - 42101944
Alignment:
Q  699 gcactaaagctcccgcatacgcagggttcgggaaggggtcccacca 744  Q
    ||||||||||| ||| ||||||||||| |||||| |||||||||||    
T  42101899 gcactaaagctgccggatacgcagggtccgggaaagggtcccacca 42101944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 63; Significance: 6e-27; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 688 - 770
Target Start/End: Complemental strand, 59110 - 59028
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||| |||||||||||||||||| ||||    
T  59110 ggcaacccgatgcactaaagctcccgcatacgcagagtctgggaaggggtcccaccatttttggtgtattgtacgcagtctta 59028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 61; Significance: 9e-26; HSPs: 4)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 683 - 770
Target Start/End: Original strand, 24771 - 24856
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| |||||||||||||||    
T  24771 aaaagggcaaccggctgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccat--ttggtgtgttgtacgcagcctta 24856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 683 - 770
Target Start/End: Complemental strand, 46967 - 46882
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||| |||||    
T  46967 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccat--ttggtgtattgtacgcaacctta 46882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #3
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 696 - 770
Target Start/End: Original strand, 46719 - 46792
Alignment:
Q  696 gatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||| |||||||||||||||||||||||  ||||||||||||||||||| ||||| ||||||| ||| |||||    
T  46719 gatgcattaaagctcccgcatacgcagggtctgggaaggggtcccaccatt-ttggtatattgtatgcatcctta 46792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 698 - 770
Target Start/End: Complemental strand, 43779 - 43708
Alignment:
Q  698 tgcactaaagctcccgcatacgcagggttcgggaa-ggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||| |||||||||||| ||||||| || ||| ||||||||||||||  ||||||||||||||||||||||    
T  43779 tgcactagagctcccgcatatgcagggtccgagaaaggggtcccaccatt--tggtgtattgtacgcagcctta 43708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 58; Significance: 5e-24; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 682 - 770
Target Start/End: Original strand, 48632 - 48718
Alignment:
Q  682 taaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||| ||||||||| ||||||| |||||||||||| ||||||| |||||||||||||||||||  |||||||||||||||||||||||    
T  48632 taaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccat--ttggtgtattgtacgcagcctta 48718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 683 - 767
Target Start/End: Complemental strand, 30713 - 30631
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcc 767  Q
    |||| ||||||||| ||||||| |||||||||||| ||||||| |||||||||||||||||||  ||||||||||||||||||||    
T  30713 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccat--ttggtgtattgtacgcagcc 30631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 53; Significance: 5e-21; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 683 - 770
Target Start/End: Original strand, 13023 - 13108
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||||||| ||||||||||| ||||||||||||||||  ||||||||||||||||||  | |||||||||||||||||||||    
T  13023 aaaagggcaacccggtgcactaaagcccccgcatacgcagggtctgggaaggggtcccaccat--tcggtgtattgtacgcagcctta 13108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 53; Significance: 5e-21; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 683 - 770
Target Start/End: Original strand, 24132 - 24217
Alignment:
Q  683 aaaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||| ||||| ||| ||||||| |||||||||||| ||||||| |||||||||||||||||||  |||||||||||||||||||||||    
T  24132 aaaagggcaatccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccat--ttggtgtattgtacgcagcctta 24217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1176 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 684 - 770
Target Start/End: Original strand, 1587 - 1671
Alignment:
Q  684 aaaaggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||||| | ||||||||||||||||||||||| |||| ||||||||||||||| |||  ||||||||||||| |||||||||    
T  1587 aaaaggcaacctggtgcactaaagctcccgcatacgccgggtccgggaaggggtcccatcat--ttggtgtattgtatgcagcctta 1671  T

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Target: scaffold0311 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 689 - 767
Target Start/End: Complemental strand, 10940 - 10864
Alignment:
Q  689 gcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcc 767  Q
    |||||||  |||||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||| ||||||||    
T  10940 gcaacccagtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccat--ttggtgtattggacgcagcc 10864  T

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Target: scaffold0954 (Bit Score: 46; Significance: 8e-17; HSPs: 1)
Name: scaffold0954
Description:

Target: scaffold0954; HSP #1
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 698 - 770
Target Start/End: Complemental strand, 3665 - 3595
Alignment:
Q  698 tgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    |||||||||||| ||||||||||||||||||||||||||||||| |||  | |||||||| ||||||||||||    
T  3665 tgcactaaagctgccgcatacgcagggttcgggaaggggtcccatcat--tcggtgtattatacgcagcctta 3595  T

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Target: scaffold0223 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 688 - 770
Target Start/End: Complemental strand, 11260 - 11180
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||| | ||||||| |||||||||||| ||||||| |||||||| ||||||||||  ||||||||||||| |||||||||    
T  11260 ggcaacctggtgcactagagctcccgcatatgcagggtccgggaaggtgtcccaccat--ttggtgtattgtaagcagcctta 11180  T

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Target: scaffold0018 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 688 - 770
Target Start/End: Original strand, 72871 - 72951
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||| | |||||||||||||||||||||||||| | ||||||||||| | |||||  ||||||||||||| |||||||||    
T  72871 ggcaacctggtgcactaaagctcccgcatacgcaggttccgggaaggggtactaccat--ttggtgtattgtaggcagcctta 72951  T

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Target: scaffold0187 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 688 - 770
Target Start/End: Original strand, 10054 - 10134
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||| ||||||  |||||| ||||| ||||||| |||||||||||||||| ||  |||||||||||||||||| ||||    
T  10054 ggcaacccggtgcactggagctcctgcatatgcagggtccgggaaggggtcccactat--ttggtgtattgtacgcagtctta 10134  T

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Target: scaffold0187; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 688 - 770
Target Start/End: Original strand, 20382 - 20462
Alignment:
Q  688 ggcaacccgatgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcctta 770  Q
    ||||||||| ||||||  |||||| ||||| ||||||| |||||||||||||||| ||  |||||||||||||||||| ||||    
T  20382 ggcaacccggtgcactggagctcctgcatatgcagggtccgggaaggggtcccactat--ttggtgtattgtacgcagtctta 20462  T

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Target: scaffold0254 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 721 - 770
Target Start/End: Complemental strand, 4258 - 4208
Alignment:
Q  721 agggttcgggaaggggtcccacca-ttattggtgtattgtacgcagcctta 770  Q
    ||||| |||||||||||||||||| |||||||||||||||||||| |||||    
T  4258 agggtccgggaaggggtcccaccaattattggtgtattgtacgcaacctta 4208  T

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