View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7802_low_35 (Length: 297)
Name: NF7802_low_35
Description: NF7802
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7802_low_35 |
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Alignment Details
Target: chr3 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 22 - 284
Target Start/End: Complemental strand, 20428614 - 20428352
Alignment:
| Q |
22 |
ccattttatatagattatagatttcatttaccatcatctcaccatctactagttgcctacgtacctttaataaaactttttgtgttttgacatatgagat |
121 |
Q |
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| T |
20428614 |
ccattttatatagatcatagatttaatttaccatcatctcacaatctactagttgcctacgtacctttaataaaactttttgtgttttgacatatgagat |
20428515 |
T |
|
| Q |
122 |
agtttatgctcatttctaacctatcatcgaaggccttatccatgaatttatacaagcaccccaacaaagataagggtctaaaatgataaaggtggtataa |
221 |
Q |
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||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
20428514 |
agtttatgctcgtttctaacctatcatcgaagaccttatccatgaatttatacaagcaccccaacaaagatatgggtctaaaatgataaaggtggtataa |
20428415 |
T |
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| Q |
222 |
ttagtctactttagttataatagtaagaaaataagagtagaaaatttgtgcaagtatagcatt |
284 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
20428414 |
ttagtctactttagttataatagtaagaaaataagagtagaaaatttatgcaagtatagcatt |
20428352 |
T |
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