View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7802_low_41 (Length: 270)
Name: NF7802_low_41
Description: NF7802
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7802_low_41 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 1 - 270
Target Start/End: Original strand, 403210 - 403479
Alignment:
| Q |
1 |
cttttcccccaattgttccttcttttctttgcctcttttcacattagacacttggtttgaataagcatcttcaaatccactatcactatctgatgaattg |
100 |
Q |
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| T |
403210 |
cttttcccccaattgttccttcttttctttgcctcttttcacattagacacttggtttgaataagcatcttcaaatccactatcactatctgatgaattg |
403309 |
T |
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| Q |
101 |
taagacttgttcttctcagattcattgttcttcaaccgttcgttatttaacttgtttcctataaaaacattattatcacttgatctaatgtttttattgt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
403310 |
taagacttgttcttctcagattcattgttcttcaaccgttcgttatttaacttatttcctataaaaacattattatcacttgatctaatgtttttattgt |
403409 |
T |
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| Q |
201 |
cacttgtattgctaatctgatattttgaggctgttttagactttgttttctgtgttttaattctttcact |
270 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
403410 |
cacttgtattgctaatctgatattttgaggctgttttagactttgctttctgtgttttaattctttcact |
403479 |
T |
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