View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7802_low_45 (Length: 256)

Name: NF7802_low_45
Description: NF7802
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7802_low_45
NF7802_low_45
[»] chr2 (66 HSPs)
chr2 (9-228)||(27149173-27149392)
chr2 (43-239)||(2869605-2869802)
chr2 (43-239)||(34682246-34682443)
chr2 (43-239)||(14698922-14699116)
chr2 (43-240)||(15903803-15903998)
chr2 (81-239)||(20522208-20522367)
chr2 (43-239)||(39482919-39483117)
chr2 (43-213)||(31056058-31056227)
chr2 (43-213)||(33118150-33118319)
chr2 (81-239)||(10445394-10445553)
chr2 (43-213)||(13569342-13569513)
chr2 (43-239)||(21629932-21630129)
chr2 (43-213)||(2837943-2838113)
chr2 (42-207)||(8040080-8040248)
chr2 (43-239)||(8390062-8390259)
chr2 (43-213)||(10707165-10707335)
chr2 (43-200)||(28770687-28770844)
chr2 (43-203)||(17865227-17865389)
chr2 (81-239)||(33528576-33528730)
chr2 (43-208)||(34388877-34389035)
chr2 (43-183)||(18674313-18674454)
chr2 (141-213)||(28259188-28259260)
chr2 (48-222)||(40014930-40015104)
chr2 (139-205)||(25398517-25398583)
chr2 (139-205)||(25403655-25403721)
chr2 (43-185)||(35397554-35397694)
chr2 (82-206)||(23078422-23078546)
chr2 (43-213)||(1345454-1345624)
chr2 (139-205)||(3491772-3491838)
chr2 (43-213)||(42039581-42039752)
chr2 (139-205)||(9296410-9296476)
chr2 (139-205)||(11098936-11099002)
chr2 (139-205)||(14291510-14291576)
chr2 (139-189)||(25407660-25407710)
chr2 (114-239)||(16940193-16940318)
chr2 (114-239)||(17010858-17010983)
chr2 (143-205)||(40738865-40738926)
chr2 (109-213)||(16388449-16388554)
chr2 (153-200)||(2736315-2736362)
chr2 (153-200)||(2741051-2741098)
chr2 (153-200)||(17462546-17462593)
chr2 (158-213)||(35215596-35215651)
chr2 (158-213)||(35217973-35218028)
chr2 (153-200)||(45679833-45679880)
chr2 (154-200)||(33670991-33671037)
chr2 (154-217)||(27517645-27517709)
chr2 (158-213)||(23452247-23452302)
chr2 (142-205)||(32246810-32246872)
chr2 (149-208)||(36757781-36757840)
chr2 (153-200)||(39680155-39680202)
chr2 (153-200)||(39687093-39687140)
chr2 (142-205)||(39811989-39812051)
chr2 (142-205)||(44312625-44312687)
chr2 (158-213)||(45279994-45280049)
chr2 (158-213)||(45332191-45332246)
chr2 (109-207)||(3278022-3278119)
chr2 (154-200)||(12781245-12781291)
chr2 (154-200)||(17943647-17943693)
chr2 (154-188)||(20050058-20050092)
chr2 (154-200)||(30479106-30479152)
chr2 (159-213)||(36558874-36558928)
chr2 (159-213)||(36561151-36561205)
chr2 (154-215)||(39287279-39287341)
chr2 (105-154)||(11151671-11151722)
chr2 (81-154)||(11690515-11690589)
chr2 (81-154)||(42362366-42362440)
[»] chr4 (72 HSPs)
chr4 (43-240)||(1983214-1983409)
chr4 (43-240)||(5112225-5112421)
chr4 (43-222)||(39774218-39774397)
chr4 (81-239)||(10047367-10047526)
chr4 (43-240)||(18377347-18377543)
chr4 (43-203)||(37781887-37782047)
chr4 (82-239)||(36315181-36315338)
chr4 (82-239)||(36329390-36329547)
chr4 (43-239)||(16623205-16623402)
chr4 (43-213)||(34670578-34670745)
chr4 (43-239)||(38152350-38152548)
chr4 (43-240)||(24333796-24333995)
chr4 (81-207)||(3796469-3796596)
chr4 (129-240)||(34495822-34495932)
chr4 (127-239)||(39245982-39246094)
chr4 (43-239)||(54867172-54867364)
chr4 (114-239)||(16630664-16630789)
chr4 (143-239)||(5269204-5269300)
chr4 (82-213)||(5396623-5396754)
chr4 (142-213)||(5143273-5143344)
chr4 (43-239)||(6743327-6743523)
chr4 (42-213)||(25861946-25862105)
chr4 (139-213)||(31985643-31985716)
chr4 (43-207)||(42599487-42599651)
chr4 (81-239)||(5147665-5147824)
chr4 (139-205)||(24741962-24742028)
chr4 (143-205)||(28468542-28468604)
chr4 (139-205)||(29760663-29760729)
chr4 (43-239)||(3777537-3777733)
chr4 (43-176)||(18912276-18912409)
chr4 (153-200)||(11853659-11853706)
chr4 (158-213)||(16931799-16931854)
chr4 (158-213)||(16934153-16934208)
chr4 (158-213)||(22780383-22780438)
chr4 (158-213)||(22782748-22782803)
chr4 (44-195)||(39593761-39593910)
chr4 (158-213)||(44599848-44599903)
chr4 (154-207)||(5336796-5336850)
chr4 (154-200)||(18587078-18587124)
chr4 (142-205)||(3814046-3814108)
chr4 (158-213)||(5198688-5198743)
chr4 (142-205)||(5732687-5732749)
chr4 (158-213)||(6765112-6765167)
chr4 (158-213)||(7941591-7941646)
chr4 (143-213)||(8689498-8689566)
chr4 (142-205)||(9224408-9224470)
chr4 (142-205)||(9229195-9229257)
chr4 (158-213)||(11008578-11008633)
chr4 (154-201)||(16631295-16631342)
chr4 (158-213)||(18709174-18709229)
chr4 (158-213)||(22132402-22132457)
chr4 (158-213)||(24348486-24348541)
chr4 (43-93)||(36175242-36175290)
chr4 (158-213)||(38409472-38409527)
chr4 (142-205)||(51520479-51520541)
chr4 (153-200)||(55822375-55822421)
chr4 (142-205)||(56146712-56146774)
chr4 (154-200)||(4884986-4885032)
chr4 (154-200)||(8529379-8529425)
chr4 (158-208)||(9176489-9176539)
chr4 (154-200)||(15831253-15831299)
chr4 (154-200)||(18537497-18537543)
chr4 (163-205)||(18855749-18855791)
chr4 (154-200)||(25613980-25614026)
chr4 (154-200)||(36769591-36769637)
chr4 (154-187)||(10113134-10113167)
chr4 (158-219)||(11006241-11006302)
chr4 (154-199)||(12102352-12102397)
chr4 (154-191)||(13072014-13072051)
chr4 (43-183)||(873431-873571)
chr4 (156-200)||(4556084-4556128)
chr4 (169-213)||(19096162-19096206)
[»] chr5 (52 HSPs)
chr5 (43-240)||(7160817-7161012)
chr5 (44-213)||(33030854-33031023)
chr5 (43-239)||(11181745-11181941)
chr5 (43-219)||(2630239-2630415)
chr5 (43-213)||(10281765-10281936)
chr5 (43-213)||(6741866-6742036)
chr5 (43-239)||(19588734-19588929)
chr5 (81-239)||(11916922-11917081)
chr5 (82-213)||(12084127-12084258)
chr5 (43-241)||(28832245-28832441)
chr5 (41-207)||(3880319-3880486)
chr5 (82-239)||(17003911-17004069)
chr5 (43-239)||(42127323-42127519)
chr5 (141-213)||(9353343-9353415)
chr5 (141-213)||(36932361-36932433)
chr5 (141-213)||(15464546-15464618)
chr5 (139-205)||(38192195-38192261)
chr5 (139-205)||(38219420-38219486)
chr5 (82-213)||(14520244-14520375)
chr5 (139-205)||(35387684-35387750)
chr5 (158-213)||(4410236-4410291)
chr5 (149-239)||(31300615-31300705)
chr5 (153-200)||(1170921-1170968)
chr5 (142-205)||(15044708-15044770)
chr5 (158-213)||(15552459-15552514)
chr5 (158-213)||(31179381-31179436)
chr5 (158-213)||(31542948-31543003)
chr5 (158-213)||(31545294-31545349)
chr5 (154-200)||(22672946-22672992)
chr5 (139-205)||(24135870-24135936)
chr5 (154-200)||(25445608-25445654)
chr5 (139-205)||(31180236-31180301)
chr5 (154-200)||(35385476-35385522)
chr5 (45-186)||(34842644-34842785)
chr5 (158-213)||(3373147-3373202)
chr5 (171-217)||(29748577-29748624)
chr5 (142-205)||(43592301-43592363)
chr5 (142-205)||(43598746-43598808)
chr5 (142-205)||(43604238-43604300)
chr5 (142-205)||(43609730-43609792)
chr5 (154-200)||(2298025-2298071)
chr5 (154-200)||(10627478-10627524)
chr5 (159-213)||(10749915-10749969)
chr5 (159-213)||(15354585-15354639)
chr5 (154-200)||(25452607-25452653)
chr5 (139-189)||(30631444-30631493)
chr5 (163-205)||(31401871-31401913)
chr5 (159-213)||(38960142-38960196)
chr5 (154-200)||(42238372-42238418)
chr5 (80-154)||(33831693-33831768)
chr5 (143-239)||(24553520-24553615)
chr5 (159-187)||(36263849-36263877)
[»] chr8 (52 HSPs)
chr8 (43-207)||(9054750-9054914)
chr8 (43-228)||(5990474-5990657)
chr8 (44-208)||(3051139-3051303)
chr8 (43-236)||(28307552-28307746)
chr8 (43-213)||(6127235-6127407)
chr8 (81-239)||(23799527-23799686)
chr8 (42-239)||(5702393-5702592)
chr8 (73-219)||(6813691-6813838)
chr8 (81-239)||(26403180-26403339)
chr8 (82-213)||(7412355-7412486)
chr8 (43-239)||(19752306-19752503)
chr8 (139-213)||(31071238-31071312)
chr8 (139-205)||(1261963-1262029)
chr8 (128-206)||(18870560-18870638)
chr8 (128-205)||(18853166-18853243)
chr8 (141-213)||(19175765-19175837)
chr8 (82-208)||(4456047-4456173)
chr8 (139-205)||(4760084-4760150)
chr8 (43-169)||(7493086-7493212)
chr8 (151-239)||(4696617-4696705)
chr8 (159-213)||(9765848-9765902)
chr8 (143-205)||(26287923-26287985)
chr8 (143-205)||(26301180-26301242)
chr8 (143-205)||(26313174-26313236)
chr8 (139-205)||(36979399-36979465)
chr8 (139-205)||(10689152-10689218)
chr8 (158-208)||(24873196-24873246)
chr8 (139-205)||(30655668-30655734)
chr8 (73-152)||(8863569-8863646)
chr8 (154-213)||(17847785-17847845)
chr8 (153-200)||(16757292-16757339)
chr8 (158-213)||(18813151-18813206)
chr8 (153-200)||(25684753-25684800)
chr8 (158-213)||(43079872-43079927)
chr8 (158-213)||(43082243-43082298)
chr8 (154-200)||(28890877-28890923)
chr8 (154-200)||(29554809-29554855)
chr8 (43-77)||(31513245-31513279)
chr8 (139-205)||(33037816-33037881)
chr8 (153-201)||(4812511-4812559)
chr8 (142-205)||(6311319-6311381)
chr8 (142-205)||(7289927-7289989)
chr8 (142-205)||(25328279-25328341)
chr8 (158-213)||(28251577-28251632)
chr8 (153-200)||(28328018-28328065)
chr8 (158-213)||(44721113-44721168)
chr8 (105-187)||(11771981-11772063)
chr8 (163-205)||(39784843-39784885)
chr8 (158-199)||(18810977-18811018)
chr8 (158-219)||(32339579-32339640)
chr8 (181-213)||(19491709-19491741)
chr8 (81-154)||(30291620-30291695)
[»] chr1 (54 HSPs)
chr1 (41-222)||(22819433-22819615)
chr1 (43-236)||(47703848-47704042)
chr1 (43-206)||(32736909-32737072)
chr1 (43-239)||(13598386-13598584)
chr1 (81-239)||(16124466-16124625)
chr1 (43-239)||(29651799-29651997)
chr1 (80-222)||(9023789-9023931)
chr1 (43-219)||(17345432-17345607)
chr1 (81-213)||(19072942-19073075)
chr1 (81-213)||(19120832-19120965)
chr1 (81-239)||(9476249-9476408)
chr1 (43-213)||(35109450-35109619)
chr1 (120-239)||(27104362-27104481)
chr1 (43-239)||(32889427-32889624)
chr1 (139-204)||(19358852-19358917)
chr1 (139-204)||(19361441-19361506)
chr1 (139-204)||(19380081-19380146)
chr1 (43-239)||(47098738-47098933)
chr1 (82-213)||(3281722-3281853)
chr1 (82-213)||(26644849-26644980)
chr1 (141-213)||(13604634-13604706)
chr1 (141-200)||(21536580-21536639)
chr1 (139-205)||(24202778-24202844)
chr1 (141-213)||(37069784-37069856)
chr1 (142-208)||(775691-775757)
chr1 (43-185)||(918392-918535)
chr1 (43-157)||(40816729-40816841)
chr1 (43-239)||(47102752-47102950)
chr1 (158-213)||(9459429-9459484)
chr1 (158-213)||(9463256-9463311)
chr1 (42-89)||(11031386-11031433)
chr1 (80-167)||(11032270-11032357)
chr1 (158-213)||(16226381-16226436)
chr1 (158-213)||(16231777-16231832)
chr1 (106-173)||(48382457-48382524)
chr1 (154-200)||(9314667-9314713)
chr1 (42-152)||(10997031-10997141)
chr1 (154-200)||(21353372-21353418)
chr1 (43-83)||(9022817-9022857)
chr1 (154-198)||(9521827-9521871)
chr1 (154-213)||(9241097-9241156)
chr1 (142-205)||(25445090-25445152)
chr1 (142-205)||(41390603-41390665)
chr1 (142-205)||(41398258-41398320)
chr1 (158-213)||(51752577-51752632)
chr1 (158-213)||(51757744-51757799)
chr1 (154-200)||(4144707-4144753)
chr1 (154-200)||(9526578-9526624)
chr1 (159-213)||(23786054-23786108)
chr1 (139-205)||(24787374-24787439)
chr1 (163-205)||(39445522-39445564)
chr1 (163-205)||(44023894-44023936)
chr1 (43-135)||(8281410-8281502)
chr1 (181-213)||(41361040-41361072)
[»] chr7 (63 HSPs)
chr7 (80-240)||(28617175-28617335)
chr7 (43-213)||(5817183-5817352)
chr7 (43-240)||(3047242-3047438)
chr7 (43-205)||(2647610-2647771)
chr7 (43-239)||(29159791-29159989)
chr7 (81-239)||(46516260-46516419)
chr7 (43-239)||(20284077-20284273)
chr7 (43-239)||(49091649-49091847)
chr7 (43-239)||(55936-56133)
chr7 (43-239)||(2580378-2580574)
chr7 (43-239)||(33332363-33332559)
chr7 (43-239)||(4796581-4796776)
chr7 (43-239)||(9189920-9190117)
chr7 (81-239)||(35960804-35960963)
chr7 (142-213)||(21983298-21983369)
chr7 (139-205)||(21639830-21639896)
chr7 (82-213)||(44848636-44848767)
chr7 (43-208)||(23402926-23403091)
chr7 (139-205)||(2057987-2058053)
chr7 (139-205)||(18408785-18408851)
chr7 (149-213)||(47263692-47263754)
chr7 (139-187)||(18413679-18413727)
chr7 (158-213)||(7351662-7351717)
chr7 (139-205)||(1533453-1533519)
chr7 (143-213)||(9185178-9185248)
chr7 (154-213)||(21369754-21369814)
chr7 (153-200)||(3320075-3320122)
chr7 (153-200)||(3324823-3324870)
chr7 (153-200)||(25405503-25405550)
chr7 (158-213)||(31155921-31155976)
chr7 (154-200)||(2121011-2121057)
chr7 (158-208)||(7349288-7349338)
chr7 (139-205)||(20357557-20357622)
chr7 (139-205)||(21646028-21646094)
chr7 (141-213)||(2479351-2479422)
chr7 (154-217)||(44010756-44010820)
chr7 (158-213)||(1046935-1046990)
chr7 (158-213)||(1049306-1049361)
chr7 (158-213)||(1850205-1850260)
chr7 (158-213)||(3035948-3036003)
chr7 (142-205)||(4866752-4866814)
chr7 (154-208)||(6046714-6046769)
chr7 (154-208)||(6067213-6067268)
chr7 (153-200)||(7069890-7069937)
chr7 (153-200)||(7074897-7074944)
chr7 (142-205)||(19992335-19992397)
chr7 (158-213)||(20297586-20297641)
chr7 (142-205)||(24024327-24024389)
chr7 (43-118)||(45685658-45685733)
chr7 (159-213)||(2935493-2935547)
chr7 (154-200)||(8378528-8378574)
chr7 (159-213)||(9027204-9027258)
chr7 (142-239)||(21988896-21988991)
chr7 (159-213)||(22108291-22108345)
chr7 (159-213)||(22137302-22137356)
chr7 (154-200)||(25351463-25351509)
chr7 (154-200)||(25410242-25410288)
chr7 (154-200)||(34546904-34546950)
chr7 (159-213)||(40550051-40550105)
chr7 (159-213)||(40552329-40552383)
chr7 (43-135)||(9235495-9235588)
chr7 (154-217)||(24817358-24817422)
chr7 (154-213)||(30247082-30247142)
[»] chr3 (78 HSPs)
chr3 (43-239)||(18552787-18552982)
chr3 (64-201)||(4386851-4386988)
chr3 (43-213)||(8370390-8370559)
chr3 (43-213)||(25795795-25795964)
chr3 (43-213)||(40844666-40844834)
chr3 (81-239)||(1736245-1736404)
chr3 (43-239)||(48438202-48438400)
chr3 (82-239)||(21711211-21711368)
chr3 (43-239)||(3715904-3716101)
chr3 (43-239)||(40592684-40592881)
chr3 (81-207)||(36029113-36029240)
chr3 (141-239)||(6794714-6794812)
chr3 (43-239)||(24695068-24695263)
chr3 (43-239)||(26298976-26299171)
chr3 (43-239)||(1417393-1417589)
chr3 (43-213)||(30709691-30709863)
chr3 (43-185)||(21353604-21353746)
chr3 (139-213)||(32143335-32143409)
chr3 (141-213)||(16264364-16264436)
chr3 (141-213)||(27974953-27975025)
chr3 (142-240)||(25929445-25929541)
chr3 (139-213)||(27452972-27453046)
chr3 (143-213)||(27986449-27986519)
chr3 (143-213)||(33386669-33386739)
chr3 (43-239)||(3328259-3328455)
chr3 (43-167)||(5366226-5366351)
chr3 (46-213)||(29100173-29100342)
chr3 (43-239)||(47923806-47924005)
chr3 (43-206)||(3323593-3323756)
chr3 (43-172)||(8126685-8126814)
chr3 (139-205)||(26928600-26928666)
chr3 (80-239)||(37466279-37466438)
chr3 (158-213)||(38210564-38210619)
chr3 (139-205)||(2671595-2671661)
chr3 (139-205)||(7167266-7167332)
chr3 (139-205)||(8477384-8477450)
chr3 (139-205)||(8739072-8739138)
chr3 (139-205)||(9091310-9091376)
chr3 (139-205)||(40372804-40372870)
chr3 (143-213)||(39039995-39040065)
chr3 (158-213)||(6063454-6063509)
chr3 (153-200)||(6303420-6303467)
chr3 (153-200)||(10094099-10094146)
chr3 (153-200)||(10100116-10100163)
chr3 (153-200)||(10200979-10201026)
chr3 (50-133)||(25517076-25517159)
chr3 (158-213)||(50494193-50494248)
chr3 (139-205)||(1305970-1306036)
chr3 (154-200)||(10595058-10595104)
chr3 (154-200)||(10897117-10897163)
chr3 (158-208)||(28413045-28413095)
chr3 (154-200)||(54193338-54193384)
chr3 (81-154)||(23391989-23392063)
chr3 (158-213)||(458478-458533)
chr3 (153-200)||(10208025-10208072)
chr3 (158-213)||(10621538-10621593)
chr3 (142-205)||(18656457-18656519)
chr3 (142-205)||(22173196-22173258)
chr3 (153-200)||(27544383-27544430)
chr3 (154-200)||(5858656-5858702)
chr3 (154-200)||(10612802-10612848)
chr3 (154-200)||(11079629-11079675)
chr3 (154-200)||(22626008-22626054)
chr3 (156-213)||(23941956-23942014)
chr3 (154-200)||(29913979-29914025)
chr3 (43-213)||(35925497-35925663)
chr3 (154-200)||(48390326-48390372)
chr3 (43-76)||(25929299-25929332)
chr3 (154-187)||(54188621-54188654)
chr3 (158-198)||(456101-456141)
chr3 (81-154)||(760861-760935)
chr3 (154-213)||(1620468-1620528)
chr3 (169-217)||(11168306-11168354)
chr3 (81-154)||(22835082-22835156)
chr3 (81-154)||(23410409-23410483)
chr3 (81-154)||(29682373-29682447)
chr3 (81-154)||(32891117-32891192)
chr3 (154-213)||(36871308-36871368)
[»] chr6 (51 HSPs)
chr6 (43-239)||(5572155-5572350)
chr6 (43-239)||(31979501-31979697)
chr6 (43-240)||(31076849-31077051)
chr6 (43-239)||(10077081-10077274)
chr6 (43-239)||(31086386-31086582)
chr6 (43-207)||(21801257-21801421)
chr6 (43-240)||(24435884-24436080)
chr6 (43-208)||(18232864-18233031)
chr6 (43-185)||(1115017-1115159)
chr6 (43-213)||(14521688-14521857)
chr6 (141-213)||(5757489-5757561)
chr6 (43-207)||(4629974-4630138)
chr6 (79-239)||(22963688-22963847)
chr6 (79-239)||(23824546-23824705)
chr6 (143-239)||(31936575-31936671)
chr6 (64-208)||(27165702-27165847)
chr6 (149-213)||(21356050-21356114)
chr6 (139-205)||(5674779-5674845)
chr6 (143-213)||(22709032-22709102)
chr6 (60-167)||(30518058-30518165)
chr6 (43-213)||(33721471-33721642)
chr6 (43-135)||(99248-99339)
chr6 (143-239)||(5017482-5017578)
chr6 (142-205)||(11856996-11857058)
chr6 (158-213)||(12195525-12195580)
chr6 (153-200)||(13878837-13878884)
chr6 (153-200)||(13883585-13883632)
chr6 (142-205)||(14742437-14742499)
chr6 (153-200)||(16786029-16786076)
chr6 (157-213)||(5273226-5273282)
chr6 (154-213)||(7294040-7294100)
chr6 (154-213)||(16455434-16455494)
chr6 (158-213)||(4816241-4816296)
chr6 (142-205)||(14737577-14737639)
chr6 (158-213)||(19704577-19704632)
chr6 (158-213)||(20915366-20915421)
chr6 (142-205)||(22010698-22010760)
chr6 (158-213)||(26932572-26932627)
chr6 (158-213)||(30967450-30967505)
chr6 (153-200)||(31248739-31248786)
chr6 (153-200)||(35201351-35201398)
chr6 (154-200)||(5165837-5165883)
chr6 (163-205)||(6438523-6438565)
chr6 (154-200)||(17065964-17066010)
chr6 (154-200)||(25941781-25941827)
chr6 (159-213)||(29754719-29754773)
chr6 (43-97)||(31936707-31936761)
chr6 (154-200)||(33215939-33215985)
chr6 (159-213)||(33309106-33309160)
chr6 (163-205)||(33335963-33336005)
chr6 (165-205)||(28184527-28184567)
[»] scaffold0006 (4 HSPs)
scaffold0006 (43-239)||(5671-5869)
scaffold0006 (57-239)||(2480-2661)
scaffold0006 (141-213)||(133291-133363)
scaffold0006 (153-185)||(224929-224961)
[»] scaffold0078 (2 HSPs)
scaffold0078 (43-222)||(23533-23715)
scaffold0078 (143-207)||(43274-43338)
[»] scaffold0148 (1 HSPs)
scaffold0148 (89-239)||(10717-10868)
[»] scaffold0036 (1 HSPs)
scaffold0036 (81-207)||(85703-85829)
[»] scaffold0176 (1 HSPs)
scaffold0176 (43-213)||(17277-17446)
[»] scaffold0140 (3 HSPs)
scaffold0140 (141-213)||(8430-8502)
scaffold0140 (159-213)||(22339-22393)
scaffold0140 (159-213)||(24614-24668)
[»] scaffold0002 (1 HSPs)
scaffold0002 (43-211)||(14699-14868)
[»] scaffold0087 (2 HSPs)
scaffold0087 (141-213)||(43972-44044)
scaffold0087 (141-213)||(36843-36915)
[»] scaffold0188 (2 HSPs)
scaffold0188 (139-205)||(17961-18027)
scaffold0188 (139-205)||(24054-24120)
[»] scaffold0016 (1 HSPs)
scaffold0016 (43-152)||(102407-102516)
[»] scaffold0098 (1 HSPs)
scaffold0098 (151-213)||(45267-45329)
[»] scaffold1050 (1 HSPs)
scaffold1050 (153-200)||(3094-3141)
[»] scaffold0267 (1 HSPs)
scaffold0267 (158-213)||(264-319)
[»] scaffold0209 (1 HSPs)
scaffold0209 (154-200)||(17010-17056)
[»] scaffold0154 (1 HSPs)
scaffold0154 (158-208)||(11488-11538)
[»] scaffold0355 (1 HSPs)
scaffold0355 (142-205)||(9643-9705)
[»] scaffold0135 (1 HSPs)
scaffold0135 (142-205)||(35063-35125)
[»] scaffold0025 (1 HSPs)
scaffold0025 (158-213)||(69302-69357)
[»] scaffold0472 (1 HSPs)
scaffold0472 (159-213)||(6423-6477)
[»] scaffold0464 (1 HSPs)
scaffold0464 (163-205)||(385-427)
[»] scaffold0184 (1 HSPs)
scaffold0184 (143-207)||(29506-29570)
[»] scaffold0076 (1 HSPs)
scaffold0076 (105-213)||(15963-16071)


Alignment Details
Target: chr2 (Bit Score: 204; Significance: 1e-111; HSPs: 66)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 9 - 228
Target Start/End: Original strand, 27149173 - 27149392
Alignment:
Q  9 tggtgttgtgatagaaggtggcaaaattagtcttttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattct 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||| ||||    
T  27149173 tggtgttgtgatagaaggtggcaaaattagtcttttttctcttaggattcattgtgagtgtgggtgacttaaaaaacaggtagaagttaagtcttgttct 27149272  T
Q  109 ttgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggacc 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27149273 ttgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggacc 27149372  T
Q  209 aaacttggttaccagtcttg 228  Q
    ||||||||||||||||||||    
T  27149373 aaacttggttaccagtcttg 27149392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 2869605 - 2869802
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtctta-ttctttgtgagcttttaaggtaatttcttgttacccc 141  Q
    |||||||||||||||||||| |||||||| |||||| |||||||||||||| ||| || ||  ||||||||||||||||||| ||||||||||| || ||    
T  2869605 ttttctcttaggattcattgagagtgtgggtgacttgaaaaatgggtagaaattaggtttttgttctttgtgagcttttaagctaatttcttgtaactcc 2869704  T
Q  142 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgtt 239  Q
    ||||||||||||||||  ||||||||||||||||| |||||||||| | |||||||||||||||||| |||| ||| | || | |||| |||||||||    
T  2869705 tttgtatcactttcatcttagtggattggagagctactctctcccctagagtaggtcatattggaccgaactgggtaaacaatattggtgtgtttgtt 2869802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 34682246 - 34682443
Alignment:
Q  43 ttttctcttaggattca--ttgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacc 139  Q
    |||||||||||||||||  ||||||| |||| ||||  | ||||||||||||| ||||||||| ||||| ||| ||| | |||| ||||||||||| ||     
T  34682246 ttttctcttaggattcaccttgtgagagtgggtgac--acaaaatgggtagaaattaagtcttgttcttgtgtaagcctgtaagctaatttcttgtaact 34682343  T
Q  140 cctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgtt 239  Q
    | |||||| ||||||||||||||||||||||||||||||||||||||||| | || ||||||||||||| |||| ||| | || |||||| |||||||||    
T  34682344 cttttgtaacactttcattatagtggattggagagctgctctctcccccagattatgtcatattggaccgaactgggtcaacaatcttggtgtgtttgtt 34682443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 14698922 - 14699116
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccc 141  Q
    |||||||||||||||||||| |||||||| ||||  | ||||||||||||| ||| ||||| ||||| ||| ||||| |||| ||||||||||| || |     
T  14698922 ttttctcttaggattcattgagagtgtgggtgac--acaaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactct 14699019  T
Q  142 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgtt 239  Q
    |||||| | ||||||| |||||||||||||| |||||||||||||||| | |||||||||||||||| |||| ||| | || |||||| |||||||||    
T  14699020 tttgtaac-ctttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgtt 14699116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 43 - 240
Target Start/End: Original strand, 15903803 - 15903998
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccct 142  Q
    ||||||| |||||||||||| |||||||| |||||| |||||||||||||| |||    || |||||||||||||| |||| || |||||||| ||||||    
T  15903803 ttttctcataggattcattgagagtgtgggtgacttgaaaaatgggtagaaattagaatttgttctttgtgagcttgtaagcta-tttcttgtaacccct 15903901  T
Q  143 ttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgttt 240  Q
    |||||||||||| ||  ||||||||||||||  | ||||||||  || |||||||||||||||| | |||| |||||||| |||||| || |||||||    
T  15903902 ttgtatcacttttatcttagtggattggagattttctctctccgtcagagtaggtcatattggatcgaactaggttacca-tcttggtgtatttgttt 15903998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 81 - 239
Target Start/End: Complemental strand, 20522367 - 20522208
Alignment:
Q  81 aaaatgggtagaagttaagtcttattcttt-gtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgct 179  Q
    ||||||||||||| ||||||||| |||||| || ||||| |||  ||||||||||| |||| |||||| ||||||||| |||||||||||||| | ||||    
T  20522367 aaaatgggtagaaattaagtcttgttcttttgtaagcttataatctaatttcttgtaacccttttgtaacactttcatcatagtggattggagggttgct 20522268  T
Q  180 ctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgtt 239  Q
    |||||||||| | |||||||||||||||| |||| ||| | || |||||| |||||||||    
T  20522267 ctctcccccagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgtt 20522208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 43 - 239
Target Start/End: Complemental strand, 39483117 - 39482919
Alignment:
Q  43 ttttctcttaggattcattgt---gagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttac 138  Q
    ||||||||||||||||||| |   |||||||| |||| |||||  ||||||||| ||| ||||| ||||| ||| ||||| |||| ||||||||||| ||    
T  39483117 ttttctcttaggattcattattgagagtgtgggtgacataaaa--tgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaac 39483020  T
Q  139 ccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgt 238  Q
     | |||||| || |||||| ||||||||||||||  ||||||||||||||||| |||||||||||||||| |||| ||| | || |||||| ||||||||    
T  39483019 tcttttgtaacattttcatcatagtggattggaggcctgctctctcccccatattaggtcatattggaccgaactaggtcaacaatcttggtgtgtttgt 39482920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 43 - 213
Target Start/End: Complemental strand, 31056227 - 31056058
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattcttt-gtgagcttttaaggtaatttcttgttacccc 141  Q
    |||||||||||||||||||| |||||||| ||||  | ||||||||||||| ||| ||||| |||||| || ||||| |||| |||||| |||| || |     
T  31056227 ttttctcttaggattcattgagagtgtgggtgac--acaaaatgggtagaaattaggtcttgttcttttgtaagcttataagctaatttattgtaactct 31056130  T
Q  142 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    |||||| |||||||||  |||||||||||||||||||||||||||| | | |||||||||||| ||| ||||    
T  31056129 tttgtaacactttcatcttagtggattggagagctgctctctcccctagattaggtcatattgaaccgaact 31056058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 43 - 213
Target Start/End: Complemental strand, 33118319 - 33118150
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccc 141  Q
    |||||||||| ||||||||| ||||| || ||||  | ||||||||||||| ||||||||| ||||| ||| ||||| |||| ||||||||||| ||       
T  33118319 ttttctcttaagattcattgagagtgagggtgac--acaaaatgggtagaaattaagtcttgttcttgtgtaagcttataagctaatttcttgtaactat 33118222  T
Q  142 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    |||||| | ||||||| |||||||||||||| |||||||||||||||| | |||||||||||||||| ||||    
T  33118221 tttgtaactctttcatcatagtggattggagggctgctctctcccccaaattaggtcatattggaccgaact 33118150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 81 - 239
Target Start/End: Original strand, 10445394 - 10445553
Alignment:
Q  81 aaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgct 179  Q
    ||||||||||||| ||| ||||| ||||| ||| || || |||| ||||||||||| || | |||||| ||||||||| |||||||||||||||||||||    
T  10445394 aaaatgggtagaaattaggtcttgttcttgtgtaagattgtaagctaatttcttgtaactcttttgtaacactttcataatagtggattggagagctgct 10445493  T
Q  180 ctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgtt 239  Q
    |||||||||| | |||||||||||||||| |||| | | | || |||||| |||||||||    
T  10445494 ctctcccccagattaggtcatattggaccgaactggatcaacaatcttggtgtgtttgtt 10445553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 43 - 213
Target Start/End: Complemental strand, 13569513 - 13569342
Alignment:
Q  43 ttttctcttaggattcat--tgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacc 139  Q
    ||||||||||||||||||  |||||| |||| ||||  ||| || |||||||| ||| ||||| ||||| ||| | ||| |||| ||||||||||| ||     
T  13569513 ttttctcttaggattcatattgtgagagtgggtgac--aaacaaagggtagaaattaggtcttgttcttgtgtaaacttataagctaatttcttgtaact 13569416  T
Q  140 cctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    | |||||| ||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||| ||||    
T  13569415 cttttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaact 13569342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 43 - 239
Target Start/End: Complemental strand, 21630129 - 21629932
Alignment:
Q  43 ttttctcttaggattcattgt---gagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttac 138  Q
    ||||||||||||||||||| |   |||||||| ||||  | ||||||||||||| ||||||||| ||||| ||| ||||| |||  ||||||||||| ||    
T  21630129 ttttctcttaggattcattattgagagtgtgggtgac--acaaaatgggtagaaattaagtcttgttcttgtgtaagcttataaactaatttcttgtaac 21630032  T
Q  139 ccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgt 238  Q
     | |||||| ||||||||| ||||||||||||||||||||||||| ||||| | |||||||||||||||  |||| ||| | || |||||| ||||||||    
T  21630031 tcttttgtaacactttcatcatagtggattggagagctgctctct-ccccagattaggtcatattggactgaactgggtcaacaatcttggtgtgtttgt 21629933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 43 - 213
Target Start/End: Original strand, 2837943 - 2838113
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccct 142  Q
    |||||||||||||||||||| ||  |||| |||| | ||||||||| | || ||| ||  | ||||||||||||| ||    ||||||||||| || | |    
T  2837943 ttttctcttaggattcattgagaaggtgggtgacatgaaaaatgggcaaaaattaggttgtgttctttgtgagctcttgtactaatttcttgtaactcat 2838042  T
Q  143 ttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    |||||||||||||||| ||||||||||||||  |||||||||||||| |||||||||||||||||| ||||    
T  2838043 ttgtatcactttcattttagtggattggagatgtgctctctcccccagagtaggtcatattggaccgaact 2838113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 42 - 207
Target Start/End: Complemental strand, 8040248 - 8040080
Alignment:
Q  42 tttttctcttaggattcat--tgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttac 138  Q
    |||||||||||||||||||  |||||| |||| ||||  | ||||||||||||| ||| ||||| ||||| ||| ||||| |||| ||||||||||| ||    
T  8040248 tttttctcttaggattcatattgtgagagtgggtgac--acaaaatgggtagaaattaggtcttgttcttgtgtaagcttgtaagctaatttcttgtaac 8040151  T
Q  139 ccc--tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggac 207  Q
     |   |||||| ||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||    
T  8040150 tctcttttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggac 8040080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 8390062 - 8390259
Alignment:
Q  43 ttttctcttaggattcat--tgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacc 139  Q
    ||||||||||||||||||  |||||| |||| ||||  | ||||||||||||| ||| ||||| ||||| ||  ||||| |||| ||||||||||| ||     
T  8390062 ttttctcttaggattcatattgtgagagtgggtgac--acaaaatgggtagaaattaggtcttgttcttgtgcaagcttgtaagctaatttcttgtaact 8390159  T
Q  140 cctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgtt 239  Q
    | ||| || ||||||||| ||||||||||||||||||||||||||||||| | |||||||| ||||||| |||| ||| | || | |||| |||||||||    
T  8390160 cttttttaacactttcatcatagtggattggagagctgctctctcccccaaattaggtcattttggaccgaactgggtcaacaattttggtgtgtttgtt 8390259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 43 - 213
Target Start/End: Original strand, 10707165 - 10707335
Alignment:
Q  43 ttttctcttaggattcat--tgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacc 139  Q
    ||||||||||||||||||  |||||| |||| ||||   | | |||||||||| ||| ||||| ||||| ||| ||||| |||| ||||||||||| ||     
T  10707165 ttttctcttaggattcatattgtgagagtgggtgac---acagatgggtagaaattaggtcttgttcttgtgtaagcttgtaagctaatttcttgtaact 10707261  T
Q  140 cctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    | |||||| ||||||||| |||||||||||||||| || ||||||||||||| |||||||||||||||| ||||    
T  10707262 cttttgtaacactttcatcatagtggattggagagttgttctctcccccatattaggtcatattggaccgaact 10707335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 43 - 200
Target Start/End: Original strand, 28770687 - 28770844
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagtta-agtcttattctttgtgagcttttaaggtaatttcttgttacccc 141  Q
    |||||||||||||||||||| ||||||| ||||||| |||||||||||||| ||| ||| || ||||||||||||||||||| ||||||||||| |   |    
T  28770687 ttttctcttaggattcattgcgagtgtgtatgacttgaaaaatgggtagaaattagagt-ttgttctttgtgagcttttaagctaatttcttgtaatatc 28770785  T
Q  142 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    ||||||||| | | ||  ||| |||| ||||||||||||| ||| ||| ||||||||||    
T  28770786 tttgtatcattcttatcgtagaggatcggagagctgctctatcctccagagtaggtcat 28770844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 43 - 203
Target Start/End: Complemental strand, 17865389 - 17865227
Alignment:
Q  43 ttttctcttaggattcattgt---gagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttac 138  Q
    ||||||||||||||||||| |   ||||||||||||| ||||| |  ||||||| ||| ||||| ||||| ||| ||||| |||| ||||||||||| ||    
T  17865389 ttttctcttaggattcattattgagagtgtggatgacataaaata--ggtagaaattatgtcttgttcttgtgtaagcttataagctaatttcttgtaac 17865292  T
Q  139 ccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatatt 203  Q
     | |||||| ||||||||| |||||||||||||| | |||||||||||||| | |||||||||||    
T  17865291 tcttttgtaacactttcatcatagtggattggagggttgctctctcccccagattaggtcatatt 17865227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 81 - 239
Target Start/End: Original strand, 33528576 - 33528730
Alignment:
Q  81 aaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgctc 180  Q
    ||||||||||||| ||| ||||| |||||    ||||| |||| ||||||||||| || | |||||| ||||||||| |||||||||||||| | |||||    
T  33528576 aaaatgggtagaaattaggtcttgttctt----agcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggttgctc 33528671  T
Q  181 tctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgtt 239  Q
    |||  |||||| |||||||||||||||| |||| ||| | || |||||| |||||||||    
T  33528672 tctttcccatattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgtt 33528730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 43 - 208
Target Start/End: Complemental strand, 34389035 - 34388877
Alignment:
Q  43 ttttctcttaggattcat--tgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttaccc 140  Q
    ||||||||||||||||||  |||||| |||| ||||  | ||||||||||||| ||| ||||| ||||| |||      |||| ||||||||||| || |    
T  34389035 ttttctcttaggattcatattgtgagagtgggtgac--acaaaatgggtagaaattaggtcttgttctt-gtg------taagctaatttcttgtaactc 34388945  T
Q  141 ctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggacc 208  Q
     |||||| ||||||||| |||||||||||||||||| |||||||||||| | ||||||||||||||||    
T  34388944 ttttgtaacactttcatcatagtggattggagagctactctctcccccagattaggtcatattggacc 34388877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 43 - 183
Target Start/End: Original strand, 18674313 - 18674454
Alignment:
Q  43 ttttctcttaggattcattg-tgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccc 141  Q
    |||||||||| ||||||||  ||||||||| |||||| |||||||| ||||| ||| |  || ||||||||||||||||||  ||||||||||| |||||    
T  18674313 ttttctcttatgattcatttatgagtgtgggtgacttgaaaaatggatagaaattatggtttgttctttgtgagcttttaaactaatttcttgtaacccc 18674412  T
Q  142 tttgtatcactttcattatagtggattggagagctgctctct 183  Q
    || |||||||| |  | ||||| ||| |||||||||||||||    
T  18674413 ttggtatcactcttgtcatagtagatcggagagctgctctct 18674454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 141 - 213
Target Start/End: Original strand, 28259188 - 28259260
Alignment:
Q  141 ctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||| ||||    
T  28259188 ctttgtaacactttcatcatagtggattggagagctgctctctcccccaaattaggtcatattggaccgaact 28259260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 48 - 222
Target Start/End: Complemental strand, 40015104 - 40014930
Alignment:
Q  48 tcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattcttt-gtgagcttttaaggtaatttcttgttacccctttgt 146  Q
    |||||||||| |||| |||||||| |||| | |||| || |||||| ||| ||||| |||||| ||||| ||||||| |||||||| |  || | |||||    
T  40015104 tcttaggatttattgagagtgtgggtgacatgaaaa-tgagtagaaattaggtcttgttcttttgtgagtttttaagctaatttctcgcaactcatttgt 40015006  T
Q  147 atcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggttacca 222  Q
    |||||||||||  ||||||||||||| | || |||||||| || |||| ||||||||||| | |||| ||||||||    
T  40015005 atcactttcatcttagtggattggagggatgttctctccctcagagtatgtcatattggatctaactgggttacca 40014930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 139 - 205
Target Start/End: Complemental strand, 25398583 - 25398517
Alignment:
Q  139 ccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||    
T  25398583 ccctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattgg 25398517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 139 - 205
Target Start/End: Complemental strand, 25403721 - 25403655
Alignment:
Q  139 ccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||    
T  25403721 ccctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattgg 25403655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 43 - 185
Target Start/End: Complemental strand, 35397694 - 35397554
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccct 142  Q
    |||||||||||||||||||| || ||||| |||||| |||||||| ||||| ||| || || |||||| ||| |||||||| |||||| | || ||| ||    
T  35397694 ttttctcttaggattcattgagattgtgggtgacttgaaaaatggatagaaattaggt-ttgttctttatgaccttttaagctaattt-tcgtaacctct 35397597  T
Q  143 ttgtatcactttcattatagtggattggagagctgctctctcc 185  Q
    || ||||||||||||  |||||||||| ||||||||| |||||    
T  35397596 ttatatcactttcatcttagtggattgaagagctgctatctcc 35397554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 82 - 206
Target Start/End: Original strand, 23078422 - 23078546
Alignment:
Q  82 aaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgctc 180  Q
    |||||||||||| ||||||||| ||||| ||| |||||  ||| || |||||||| || | ||| || ||||||||| |||||||||||||||| || ||    
T  23078422 aaatgggtagaaattaagtcttgttcttgtgtaagcttgcaagctattttcttgtaactc-tttctaacactttcatcatagtggattggagagttgttc 23078520  T
Q  181 tctcccccatagtaggtcatattgga 206  Q
    ||||||||||| ||||||||||||||    
T  23078521 tctcccccatattaggtcatattgga 23078546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 43 - 213
Target Start/End: Original strand, 1345454 - 1345624
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccct 142  Q
    |||||| ||| ||||||||| ||||| || |||| | |||||||||||||| ||| ||  | || ||||||||||  |  | ||||||||||  || | |    
T  1345454 ttttcttttatgattcattgagagtgggggtgacatgaaaaatgggtagaaattaggttgtgtt-tttgtgagctcatgtgctaatttcttgcaactcat 1345552  T
Q  143 ttgtatcactttcattata-gtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    |||||||||||||||  || |||||| |||||| |||||||||||||| |||||||||||||||||| ||||    
T  1345553 ttgtatcactttcatcttaagtggatcggagaggtgctctctcccccagagtaggtcatattggaccgaact 1345624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 139 - 205
Target Start/End: Complemental strand, 3491838 - 3491772
Alignment:
Q  139 ccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||| | |||| ||||||||    
T  3491838 ccctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggccatattgg 3491772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 43 - 213
Target Start/End: Original strand, 42039581 - 42039752
Alignment:
Q  43 ttttctcttaggattcat--tgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaattt-cttgttac 138  Q
    ||||||||||||||||||  |||||| |||| ||||  | ||||||||||||| ||| ||||| || || ||| |||||  ||| |||||| ||||| ||    
T  42039581 ttttctcttaggattcatattgtgagagtgggtgac--acaaaatgggtagaaattaggtcttgtttttgtgtaagcttgcaagctaattttcttgtaac 42039678  T
Q  139 ccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
     | || ||| ||||||||| |||||||||| ||||||||||||||||| || | |||||||||||||||| ||||    
T  42039679 tc-ttcgtaacactttcatcatagtggattagagagctgctctctcccacagattaggtcatattggaccgaact 42039752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 205
Target Start/End: Original strand, 9296410 - 9296476
Alignment:
Q  139 ccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    ||||||||| ||||||||| ||| ||||||||||||||||||||||||||| | |||| ||||||||    
T  9296410 ccctttgtaacactttcatcatattggattggagagctgctctctcccccaaattaggccatattgg 9296476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 205
Target Start/End: Original strand, 11098936 - 11099002
Alignment:
Q  139 ccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    ||||||||| ||||||||| ||| ||||||||||||||||||||||||||| | |||| ||||||||    
T  11098936 ccctttgtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattgg 11099002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 205
Target Start/End: Complemental strand, 14291576 - 14291510
Alignment:
Q  139 ccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    ||||||||| ||||||||| ||| ||||||||||||||||||||||||||| | |||| ||||||||    
T  14291576 ccctttgtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattgg 14291510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 189
Target Start/End: Complemental strand, 25407710 - 25407660
Alignment:
Q  139 ccctttgtatcactttcattatagtggattggagagctgctctctccccca 189  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  25407710 ccctttgtaacactttcatcatagtggattggagagctgctctctccccca 25407660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 114 - 239
Target Start/End: Original strand, 16940193 - 16940318
Alignment:
Q  114 agcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||| |||| ||||||||||| |  | |||||| ||||||||| |||||||||||||| |||| ||| ||||||| | || ||||||||||||| || |    
T  16940193 agcttataagctaatttcttgtaattcttttgtaacactttcatcatagtggattggagggctgatctttcccccagattatgtcatattggaccgaatt 16940292  T
Q  214 tggttaccagtcttggagtgtttgtt 239  Q
     ||| | || |||||| |||||||||    
T  16940293 gggtcaacaatcttggtgtgtttgtt 16940318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 114 - 239
Target Start/End: Original strand, 17010858 - 17010983
Alignment:
Q  114 agcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||| |||| ||||||||||| |  | |||||| ||||||||| |||||||||||||| |||| ||| ||||||| | || ||||||||||||| || |    
T  17010858 agcttataagctaatttcttgtaattcttttgtaacactttcatcatagtggattggagggctgatctttcccccagattatgtcatattggaccgaatt 17010957  T
Q  214 tggttaccagtcttggagtgtttgtt 239  Q
     ||| | || |||||| |||||||||    
T  17010958 gggtcaacaatcttggtgtgtttgtt 17010983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 143 - 205
Target Start/End: Complemental strand, 40738926 - 40738865
Alignment:
Q  143 ttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    ||||| ||||||||| |||||||||||||||||||||||| |||||| | |||||||||||||    
T  40738926 ttgtaacactttcatcatagtggattggagagctgctctc-cccccagattaggtcatattgg 40738865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 213
Target Start/End: Original strand, 16388449 - 16388554
Alignment:
Q  109 ttgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtca-tattggac 207  Q
    ||||||||||||||| ||||||||||| ||| |||| |||| || | || | ||||||  ||||||||||||||||| | | ||||||||| | ||||||    
T  16388449 ttgtgagcttttaagctaatttcttgtaacctctttctatctctcttatcaaagtggaaaggagagctgctctctcctctagagtaggtcatttttggac 16388548  T
Q  208 caaact 213  Q
    ||||||    
T  16388549 caaact 16388554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 200
Target Start/End: Original strand, 2736315 - 2736362
Alignment:
Q  153 ttcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    ||||||||||||||| ||||||||||||||||||||| | ||||||||    
T  2736315 ttcattatagtggatcggagagctgctctctcccccagactaggtcat 2736362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 200
Target Start/End: Original strand, 2741051 - 2741098
Alignment:
Q  153 ttcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    ||||||||||||||| ||||||||||||||||||||| | ||||||||    
T  2741051 ttcattatagtggatcggagagctgctctctcccccagactaggtcat 2741098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 200
Target Start/End: Original strand, 17462546 - 17462593
Alignment:
Q  153 ttcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    ||||||||||||||| ||||||||||||||||||||| | ||||||||    
T  17462546 ttcattatagtggatcggagagctgctctctcccccagactaggtcat 17462593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 213
Target Start/End: Complemental strand, 35215651 - 35215596
Alignment:
Q  158 tatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||||||||| |||||||||||||||| | ||||||| |||||||| ||||    
T  35215651 tatagtggattggagggctgctctctcccccagactaggtcagattggaccgaact 35215596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 213
Target Start/End: Complemental strand, 35218028 - 35217973
Alignment:
Q  158 tatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||||||||| |||||||||||||||| | ||||||| |||||||| ||||    
T  35218028 tatagtggattggagggctgctctctcccccagactaggtcagattggaccgaact 35217973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 200
Target Start/End: Original strand, 45679833 - 45679880
Alignment:
Q  153 ttcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    ||||||||||||||| ||||||||||||||||||||| | ||||||||    
T  45679833 ttcattatagtggatcggagagctgctctctcccccagactaggtcat 45679880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 154 - 200
Target Start/End: Complemental strand, 33671037 - 33670991
Alignment:
Q  154 tcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    |||||||||||||| ||||||||||||||||||||| | ||||||||    
T  33671037 tcattatagtggatcggagagctgctctctcccccagactaggtcat 33670991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 217
Target Start/End: Complemental strand, 27517709 - 27517645
Alignment:
Q  154 tcattatagtggattggagagctgctctctcccccatagtaggtcat-attggaccaaacttggt 217  Q
    |||||||||||||  ||||||||||||||||||||| | |||||||| ||| |||| ||||||||    
T  27517709 tcattatagtggaacggagagctgctctctcccccagactaggtcatcattagaccgaacttggt 27517645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 213
Target Start/End: Complemental strand, 23452302 - 23452247
Alignment:
Q  158 tatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||||||||| |||||||||||||||| | |||||||  ||||||| ||||    
T  23452302 tatagtggattggagggctgctctctcccccagactaggtcaatttggaccgaact 23452247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 205
Target Start/End: Complemental strand, 32246872 - 32246810
Alignment:
Q  142 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    |||||| ||||||| | ||| ||||||||||||||||||||||||||| | |||| ||||||||    
T  32246872 tttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 32246810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 208
Target Start/End: Original strand, 36757781 - 36757840
Alignment:
Q  149 cactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggacc 208  Q
    ||||||||| ||| ||||||||||||||| | || |||||| | ||||||||||||||||    
T  36757781 cactttcatcatactggattggagagctgttatcccccccagattaggtcatattggacc 36757840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 153 - 200
Target Start/End: Original strand, 39680155 - 39680202
Alignment:
Q  153 ttcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    ||||||||||||||  ||||||||||||||||||||| | ||||||||    
T  39680155 ttcattatagtggaacggagagctgctctctcccccagactaggtcat 39680202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 153 - 200
Target Start/End: Original strand, 39687093 - 39687140
Alignment:
Q  153 ttcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    ||||||||||||||  ||||||||||||||||||||| | ||||||||    
T  39687093 ttcattatagtggaacggagagctgctctctcccccagactaggtcat 39687140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 205
Target Start/End: Original strand, 39811989 - 39812051
Alignment:
Q  142 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    |||||| ||||||| | ||| ||||||||||||||||||||||||||| | |||| ||||||||    
T  39811989 tttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 39812051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 205
Target Start/End: Original strand, 44312625 - 44312687
Alignment:
Q  142 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    |||||| ||||||| | ||| ||||||||||||||||||||||||||| | |||| ||||||||    
T  44312625 tttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 44312687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 213
Target Start/End: Complemental strand, 45280049 - 45279994
Alignment:
Q  158 tatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    |||||||||| |||| |||||||||||||||| | |||||||  ||||||||||||    
T  45280049 tatagtggatcggagggctgctctctcccccagactaggtcaatttggaccaaact 45279994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 213
Target Start/End: Complemental strand, 45332246 - 45332191
Alignment:
Q  158 tatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||| ||||||| |||||||||||||||| | ||||||| |||||||| ||||    
T  45332246 tatagtgaattggagggctgctctctcccccagactaggtcagattggaccgaact 45332191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 207
Target Start/End: Complemental strand, 3278119 - 3278022
Alignment:
Q  109 ttgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggac 207  Q
    ||||||| ||||||| ||||||||| | ||| |||| ||||| | |||| ||||| ||| | || | |||||||||| |||||||||||||| ||||||    
T  3278119 ttgtgaggttttaagctaatttcttataacctcttt-tatcattctcatcatagtagatcgaagtgatgctctctcctccatagtaggtcattttggac 3278022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 200
Target Start/End: Complemental strand, 12781291 - 12781245
Alignment:
Q  154 tcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    |||||||||||||  ||||||||||||||||||||| | ||||||||    
T  12781291 tcattatagtggaacggagagctgctctctcccccagactaggtcat 12781245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 200
Target Start/End: Original strand, 17943647 - 17943693
Alignment:
Q  154 tcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    ||||||||||||||  |||||||||||||||||||| | ||||||||    
T  17943647 tcattatagtggatcagagagctgctctctcccccagactaggtcat 17943693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 188
Target Start/End: Complemental strand, 20050092 - 20050058
Alignment:
Q  154 tcattatagtggattggagagctgctctctccccc 188  Q
    |||||||||||||| ||||||||||||||||||||    
T  20050092 tcattatagtggatcggagagctgctctctccccc 20050058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 200
Target Start/End: Original strand, 30479106 - 30479152
Alignment:
Q  154 tcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    |||||||||| ||| ||||||||||||||||||||| | ||||||||    
T  30479106 tcattatagtagatcggagagctgctctctcccccagactaggtcat 30479152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 213
Target Start/End: Complemental strand, 36558928 - 36558874
Alignment:
Q  159 atagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||| |||| |||||||||||||||| | ||||||| |||||||| ||||    
T  36558928 atagtggatcggagggctgctctctcccccagactaggtcagattggaccgaact 36558874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 213
Target Start/End: Complemental strand, 36561205 - 36561151
Alignment:
Q  159 atagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||| |||| |||||||||||||||| | ||||||| |||||||| ||||    
T  36561205 atagtggatcggagggctgctctctcccccagactaggtcagattggaccgaact 36561151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 215
Target Start/End: Original strand, 39287279 - 39287341
Alignment:
Q  154 tcattatagtggattggagagctgctctctcccccatagtaggtca-tattggaccaaacttg 215  Q
    |||||||||||||  | |||||||||||||||| |||| ||||||| | ||||||||||||||    
T  39287279 tcattatagtggaacgaagagctgctctctccctcatactaggtcagtgttggaccaaacttg 39287341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 154
Target Start/End: Complemental strand, 11151722 - 11151671
Alignment:
Q  105 ttctttgtgagctt--ttaaggtaatttcttgttacccctttgtatcacttt 154  Q
    ||||||||||||||  ||||| ||||||||||| |||| |||||||||||||    
T  11151722 ttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatcacttt 11151671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 154
Target Start/End: Original strand, 11690515 - 11690589
Alignment:
Q  81 aaaatgggtagaagttaagtcttattctttgtgagctt--ttaaggtaatttcttgttacccctttgtatcacttt 154  Q
    ||||||||||||| ||| || || ||||||||||||||  ||||| ||||||||||| |||| |||||||| ||||    
T  11690515 aaaatgggtagaaattaggt-ttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatcccttt 11690589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 154
Target Start/End: Original strand, 42362366 - 42362440
Alignment:
Q  81 aaaatgggtagaagttaagtcttattctttgtgagctt--ttaaggtaatttcttgttacccctttgtatcacttt 154  Q
    ||||||||||||| ||| || || ||||||||||||||  ||||| ||||||||||| |||| |||||||| ||||    
T  42362366 aaaatgggtagaaattaggt-ttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatcccttt 42362440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 98; Significance: 2e-48; HSPs: 72)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 43 - 240
Target Start/End: Original strand, 1983214 - 1983409
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccct 142  Q
    |||||||||||||||||||| |||||| | |||||| ||||| || ||||| ||| || || ||||||||||||||  ||| ||||||||||| ||||||    
T  1983214 ttttctcttaggattcattgagagtgtaggtgacttgaaaaa-ggatagaaattatgttttgttctttgtgagcttgcaagctaatttcttgtaacccct 1983312  T
Q  143 ttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgttt 240  Q
    |||||||||||| ||  |||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||||| | |||| ||||||||||    
T  1983313 ttgtatcactttgatcctagtggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggttacca-tattggtgtgtttgttt 1983409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 43 - 240
Target Start/End: Complemental strand, 5112421 - 5112225
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccct 142  Q
    ||||||||||||||||||||||||||||  ||||||||||||| |||| || ||| ||||  || ||| |||| ||||||| ||||||||||| |||| |    
T  5112421 ttttctcttaggattcattgtgagtgtgagtgacttaaaaaataggtacaaattaggtctcgttttttatgagtttttaagctaatttcttgtaacccat 5112322  T
Q  143 ttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgttt 240  Q
    ||||| |||||||||  ||||||||||||||||||||||| |||||| ||||| |||||||||||| |||| |||||||| |||||| ||||||||||    
T  5112321 ttgtaacactttcatattagtggattggagagctgctctcacccccaaagtagatcatattggaccgaactgggttacca-tcttggtgtgtttgttt 5112225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 43 - 222
Target Start/End: Original strand, 39774218 - 39774397
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttatt-ctttgtgagcttttaaggtaatttcttgttacccc 141  Q
    ||||||||| |||||||||| |||||||  |||| | |||| ||| ||||| ||| ||||| || ||||||||||||||||| ||||||||||| |||      
T  39774218 ttttctcttgggattcattgagagtgtgagtgacatgaaaattgg-tagaaattaggtcttgtttctttgtgagcttttaagctaatttcttgtaaccta 39774316  T
Q  142 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggttacca 222  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||||||||| ||||  |||||||    
T  39774317 tttgtatcactttcattttagtggattggagagctgctctatcccccagagtaggtcatattggaccgaactgagttacca 39774397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 81 - 239
Target Start/End: Complemental strand, 10047526 - 10047367
Alignment:
Q  81 aaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgct 179  Q
    ||||||||||||| ||| ||||| ||||| ||| ||||| |||| ||||||||||| || | |||||| ||||||||| |||||||||||||| ||||||    
T  10047526 aaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgct 10047427  T
Q  180 ctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgtt 239  Q
    |||||||||| | |||||||||||||||| |||| ||| | || |||||| |||||||||    
T  10047426 ctctcccccagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgtt 10047367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 43 - 240
Target Start/End: Complemental strand, 18377543 - 18377347
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttatt-ctttgtgagcttttaaggtaatttcttgttacccc 141  Q
    |||| |||||||||||||||| ||||||| |||| | |||| ||||||||| ||| | ||| || ||||||||||||||||| | ||||||| | ||||     
T  18377543 ttttttcttaggattcattgtaagtgtgggtgacatgaaaa-tgggtagaaattagggcttgtttctttgtgagcttttaagctgatttcttataaccca 18377445  T
Q  142 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgttt 240  Q
    ||||||||||||||||  ||||||| ||||| |||||||||||| ||| |||||||||||| | ||  |||| |||||||| |||||| ||||||||||    
T  18377444 tttgtatcactttcatcttagtggaatggagggctgctctctcctccagagtaggtcatatagaactgaactgggttacca-tcttggtgtgtttgttt 18377347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 43 - 203
Target Start/End: Complemental strand, 37782047 - 37781887
Alignment:
Q  43 ttttctcttaggattcattgt-gagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccc 141  Q
    |||||||||| ||||||||   |||||| | |||||| |||||||||||||| |||||  || ||||||||||| ||||||| ||||||||||| ||| |    
T  37782047 ttttctcttaagattcatttacgagtgtaggtgacttgaaaaatgggtagaaattaagatttgttctttgtgagtttttaagctaatttcttgtaacctc 37781948  T
Q  142 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatatt 203  Q
    ||||||||||||| ||||||||||||||||||| | ||||||| || | |||||||||||||    
T  37781947 tttgtatcacttttattatagtggattggagagttactctctctccga-agtaggtcatatt 37781887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 82 - 239
Target Start/End: Original strand, 36315181 - 36315338
Alignment:
Q  82 aaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgctc 180  Q
    |||||||||||| ||| |||||  |||| ||| ||||| |||| ||||||||||| || | |||||| ||||||||| ||||||||||||||||||||||    
T  36315181 aaatgggtagaaattaggtcttgctcttgtgtaagcttctaagctaatttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctc 36315279  T
Q  181 tctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgtt 239  Q
    ||||||||| | |||||||||||||||| |||| ||| | || |||||| |||||||||    
T  36315280 tctcccccagattaggtcatattggaccgaactgggtcaacattcttggtgtgtttgtt 36315338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 82 - 239
Target Start/End: Original strand, 36329390 - 36329547
Alignment:
Q  82 aaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgctc 180  Q
    |||||||||||| ||| |||||  |||| ||| ||||| |||| ||||||||||| || | |||||| ||||||||| ||||||||||||||||||||||    
T  36329390 aaatgggtagaaattaggtcttgctcttgtgtaagcttctaagctaatttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctc 36329488  T
Q  181 tctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgtt 239  Q
    ||||||||| | |||||||||||||||| |||| ||| | || |||||| |||||||||    
T  36329489 tctcccccagattaggtcatattggaccgaactgggtcaacattcttggtgtgtttgtt 36329547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 16623205 - 16623402
Alignment:
Q  43 ttttctcttaggattcat--tgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacc 139  Q
    |||||| |||||||||||  |||||| |||| ||||  | ||||||||||||| ||| ||||| ||||| ||| ||||| | || ||||||||||| ||     
T  16623205 ttttcttttaggattcatattgtgagagtgggtgac--acaaaatgggtagaaattaggtcttgttcttctgtaagcttattagctaatttcttgtaact 16623302  T
Q  140 cctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgtt 239  Q
    | |||||| ||||||||| ||||||||||||||||||||||||||| ||| | |||||||||||| ||| |||| ||| | || |||||| |||||||||    
T  16623303 cttttgtaacactttcatcatagtggattggagagctgctctctcctccagattaggtcatattgaaccgaactgggtcaacaatcttggtgtgtttgtt 16623402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 43 - 213
Target Start/End: Original strand, 34670578 - 34670745
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccct 142  Q
    ||||||||||||||||||||||||||||  |||||| |||||||| ||||| ||| |  || ||||||||||||| ||||| ||||||||||| ||| ||    
T  34670578 ttttctcttaggattcattgtgagtgtgagtgacttgaaaaatggatagaaattatgatttgttctttgtgagctattaagctaatttcttgtaacctct 34670677  T
Q  143 ttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||| | |||  || |||||||||  |||||||||| |||||  ||||||||||||| ||||||| ||||    
T  34670678 ttgta-ccctt--atcatagtggatcagagagctgctatctccttcatagtaggtcattttggaccgaact 34670745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 38152350 - 38152548
Alignment:
Q  43 ttttctcttaggattcattgt---gagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttac 138  Q
    ||||||||||||||||||| |   |||||||| ||||  | ||||| ||||||| ||| ||||| ||||| ||| ||||| |||| ||||||||| | ||    
T  38152350 ttttctcttaggattcattattgagagtgtgggtgac--acaaaattggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttataac 38152447  T
Q  139 ccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgt 238  Q
     | |||||| ||||||||  ||||||||||||||||||||||||||||||| | || ||||||||||||| |||| ||| | || |||||| ||||||||    
T  38152448 tcttttgtaacactttcaccatagtggattggagagctgctctctcccccagattatgtcatattggaccgaactgggtcaacaatcttggtgtgtttgt 38152547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 43 - 240
Target Start/End: Complemental strand, 24333995 - 24333796
Alignment:
Q  43 ttttctcttaggattcat--tgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtg--agcttttaaggtaatttcttgttac 138  Q
    ||||||||||||||||||  |||||| |||| ||||  | ||||||||||||| ||| || || ||  |||||  ||||| |||| |||||| || | ||    
T  24333995 ttttctcttaggattcatattgtgagagtggctgac--acaaaatgggtagaaattaggttttttttcttgtgtaagcttgtaagctaattttttataac 24333898  T
Q  139 ccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgt 238  Q
     | |||||| ||| ||||| ||||||||||||||||||||||||||||||| | |||||||||||||||| ||||  |||| || |||||| ||||||||    
T  24333897 tcttttgtaacacgttcatcatagtggattggagagctgctctctcccccaaattaggtcatattggaccgaactgagttaacaatcttggtgtgtttgt 24333798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 81 - 207
Target Start/End: Original strand, 3796469 - 3796596
Alignment:
Q  81 aaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgct 179  Q
    ||||||||||||| ||| ||||| ||||| ||  ||||| |||| ||||||||||| || | |||||| ||||||||| |||||||||| ||||| ||||    
T  3796469 aaaatgggtagaaattaggtcttgttcttgtgcaagcttgtaagctaatttcttgtaactcttttgtaacactttcatcatagtggattagagagttgct 3796568  T
Q  180 ctctcccccatagtaggtcatattggac 207  Q
    |||||||||||| |||||||||||||||    
T  3796569 ctctcccccatattaggtcatattggac 3796596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 129 - 240
Target Start/End: Original strand, 34495822 - 34495932
Alignment:
Q  129 ttcttgttacccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggttaccagtcttg 228  Q
    ||||||| |||| ||||||||||||||||  ||||||||||||| |||||||||||||||| |||| ||||| ||||||| |||| |||||||| |||||    
T  34495822 ttcttgtaacccatttgtatcactttcatcttagtggattggagggctgctctctcccccagagtaagtcatgttggaccgaactaggttacca-tcttg 34495920  T
Q  229 gagtgtttgttt 240  Q
    | ||||||||||    
T  34495921 gtgtgtttgttt 34495932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 127 - 239
Target Start/End: Complemental strand, 39246094 - 39245982
Alignment:
Q  127 atttcttgttacccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggttaccagtct 226  Q
    ||||||||| || | |||||| ||||||||| |||||||||||||| |||||||||||||||| | |||||||||||||||| |||| ||| | || |||    
T  39246094 atttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatct 39245995  T
Q  227 tggagtgtttgtt 239  Q
    ||| |||||||||    
T  39245994 tggtgtgtttgtt 39245982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 43 - 239
Target Start/End: Complemental strand, 54867364 - 54867172
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccc 141  Q
    ||||||||||||||||||||  ||||||||||||  | ||||||||||||| ||| || || ||||| ||| ||||| |||| ||||||||| | ||       
T  54867364 ttttctcttaggattcattg--agtgtggatgac--acaaaatgggtagaaattaggtattgttcttgtgtaagcttataagctaatttcttataactat 54867269  T
Q  142 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgtt 239  Q
    |||||| || |||||| ||||| ||||| || |||||||||||||| | | |||||||||||||||| |||| ||| | || |||||| |||||||||    
T  54867268 tttgtaacattttcatcatagttgattgaagggctgctctctcccc-agactaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgtt 54867172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 114 - 239
Target Start/End: Original strand, 16630664 - 16630789
Alignment:
Q  114 agcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||| |||| ||||||||||| || | |||||| ||||||||| ||||||||||||||||||| ||||||| ||| | || ||||||||||||| ||||    
T  16630664 agcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgttctctcctccagattatgtcatattggaccgaact 16630763  T
Q  214 tggttaccagtcttggagtgtttgtt 239  Q
     ||| | ||  ||||| |||||||||    
T  16630764 aggtcaacaaccttggtgtgtttgtt 16630789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 5269204 - 5269300
Alignment:
Q  143 ttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgtt 239  Q
    ||||| ||||||||| |||||||||||||| |||||||||||||||| | |||||||||||||||| |||| ||| | || |||||  |||||||||    
T  5269204 ttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactaggtcaacaatcttgttgtgtttgtt 5269300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 82 - 213
Target Start/End: Original strand, 5396623 - 5396754
Alignment:
Q  82 aaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgctc 180  Q
    |||||||||||| ||| ||||| ||||| ||| |||||  ||| || |||||||| || | |||| | ||||||||| ||||||||||||||||||||||    
T  5396623 aaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagctattttcttgtaactc-tttgcaacactttcatcatagtggattggagagctgctc 5396721  T
Q  181 tctcccccatagtaggtcatattggaccaaact 213  Q
    ||||| ||| | |||||||||||||||| ||||    
T  5396722 tctcctccagattaggtcatattggaccgaact 5396754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 142 - 213
Target Start/End: Complemental strand, 5143344 - 5143273
Alignment:
Q  142 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    |||||| ||||||||| ||||||| ||||||||||||||||||||||| | |||||||||||||||| ||||    
T  5143344 tttgtaacactttcatcatagtgggttggagagctgctctctcccccagattaggtcatattggaccgaact 5143273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 6743327 - 6743523
Alignment:
Q  43 ttttctcttaggattcattgt---gagtgtggatgacttaaaaaatgggtagaagttaagtcttattcttt-gtgagcttttaaggtaatttcttgttac 138  Q
    ||||||||||||||||||| |   |||||||| ||||  | ||||||||||||| ||| ||||| |||||| || |||| | ||| |||||| ||||  |    
T  6743327 ttttctcttaggattcattattgagagtgtgggtgac--acaaaatgggtagaaattaggtcttgttcttttgtaagctat-aagctaattttttgtagc 6743423  T
Q  139 ccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgt 238  Q
     | |||||| ||||||||| |||||||||||||| |||||||||||||  | | |||||||||||||||| |||| ||| | || |||||| ||||||||    
T  6743424 tcttttgtaacactttcatcatagtggattggagggctgctctctcccgtagattaggtcatattggaccgaactgggtcaaca-tcttggtgtgtttgt 6743522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 213
Target Start/End: Original strand, 25861946 - 25862105
Alignment:
Q  42 tttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttaccc 140  Q
    ||||||||||||||||||||| |||||||| ||||  | ||||||||||| | ||| ||||| ||||| ||| ||||| |||| ||||||||||| ||      
T  25861946 tttttctcttaggattcattgagagtgtgggtgac--acaaaatgggtaggaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaac-- 25862041  T
Q  141 ctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
             |||||||| |||||||||||||| || ||||||| ||||||| |||||||||||||||| ||||    
T  25862042 ---------actttcatcatagtggattggagggccgctctcttccccatattaggtcatattggaccgaact 25862105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 139 - 213
Target Start/End: Original strand, 31985643 - 31985716
Alignment:
Q  139 ccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||| ||||| | |||||||||||||||| ||||    
T  31985643 ccctttgtaacactttcatcatagtggattggagagctgctctct-ccccagattaggtcatattggaccgaact 31985716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 43 - 207
Target Start/End: Original strand, 42599487 - 42599651
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattc-tttgtgagcttttaaggtaatttcttgttacccc 141  Q
    |||||||||||||||||||| ||||| || ||||  | ||||||||||||| ||| ||||| ||| ||||| ||||| |||| |||||||||| || | |    
T  42599487 ttttctcttaggattcattgagagtgcgggtgac--acaaaatgggtagaaattaggtcttgttcttttgtaagcttataagctaatttcttg-taactc 42599583  T
Q  142 tttgtatcactttcattatagtggattggagagctg--ctctctcccccatagtaggtcatattggac 207  Q
     ||||| || ||||||  ||||||||||||| | ||  |||||||||||||| || ||||||||||||    
T  42599584 attgtaacattttcatcttagtggattggagggttgctctctctcccccatattatgtcatattggac 42599651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 81 - 239
Target Start/End: Complemental strand, 5147824 - 5147665
Alignment:
Q  81 aaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgct 179  Q
    ||||||||||||| ||| | ||| ||||| ||| |||||  ||| || |||||||| ||   |||||| ||||||||| ||| |||| ||||||||||||    
T  5147824 aaaatgggtagaaattaggccttgttcttgtgtaagcttgcaagctattttcttgtaactattttgtaacactttcatcataatggactggagagctgct 5147725  T
Q  180 ctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgtt 239  Q
    | |||||||| | |||||||||||||||| |||| ||| | || ||| || |||||||||    
T  5147724 ccctcccccaaattaggtcatattggaccgaactgggtcaacaatctcggtgtgtttgtt 5147665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 205
Target Start/End: Complemental strand, 24742028 - 24741962
Alignment:
Q  139 ccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    ||||||||| ||||||||| ||| ||||||||||||||||||||||||||| | |||| ||||||||    
T  24742028 ccctttgtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattgg 24741962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 143 - 205
Target Start/End: Original strand, 28468542 - 28468604
Alignment:
Q  143 ttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    ||||| ||||||||| ||||||||||||||||||||||||||| ||| | |||||||||||||    
T  28468542 ttgtaacactttcatcatagtggattggagagctgctctctcctccagattaggtcatattgg 28468604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 205
Target Start/End: Complemental strand, 29760729 - 29760663
Alignment:
Q  139 ccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    ||||||||| ||||||||| ||| ||||||||||||||||||||||||||| | |||| ||||||||    
T  29760729 ccctttgtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattgg 29760663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 43 - 239
Target Start/End: Complemental strand, 3777733 - 3777537
Alignment:
Q  43 ttttctcttaggattc--attgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacc 139  Q
    ||||||||||||||||  |||||||| |||| ||||  | ||||||||||||| |||  |||| ||||| ||| || ||  ||| || ||||||| || |    
T  3777733 ttttctcttaggattcatattgtgagagtgggtgac--acaaaatgggtagaaattagatcttgttcttgtgtaagtttgcaagctattttcttg-taac 3777637  T
Q  140 cctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgtt 239  Q
     ||||||| ||||||||| |||||||||||||||||| |||||||| | | | ||||| |||||||||| |||| ||| | || ||| || |||||||||    
T  3777636 tctttgtaacactttcatcatagtggattggagagctactctctcctctagattaggttatattggaccgaactgggtcaacaatctcggtgtgtttgtt 3777537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 43 - 176
Target Start/End: Original strand, 18912276 - 18912409
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccct 142  Q
    |||||||||||||||||||||| || ||  |||||| |||||||| || || ||| |  || ||||||||||| || |||  |||||||||||  ||  |    
T  18912276 ttttctcttaggattcattgtgggtttgagtgacttgaaaaatggatataatttagggtttgttctttgtgagtttgtaaactaatttcttgtatccttt 18912375  T
Q  143 ttgtatcactttcattatagtggattggagagct 176  Q
    |||||||||| | || ||||||||||||||||||    
T  18912376 ttgtatcactcttatcatagtggattggagagct 18912409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 200
Target Start/End: Original strand, 11853659 - 11853706
Alignment:
Q  153 ttcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    ||||||||||||||| ||||||||||||||||||||| | ||||||||    
T  11853659 ttcattatagtggatcggagagctgctctctcccccagactaggtcat 11853706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 213
Target Start/End: Complemental strand, 16931854 - 16931799
Alignment:
Q  158 tatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||||||||| |||||||||||||||| | ||||||| |||||||| ||||    
T  16931854 tatagtggattggagggctgctctctcccccagactaggtcagattggaccgaact 16931799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 213
Target Start/End: Complemental strand, 16934208 - 16934153
Alignment:
Q  158 tatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||||||||| |||||||||||||||| | ||||||| |||||||| ||||    
T  16934208 tatagtggattggagggctgctctctcccccagactaggtcagattggaccgaact 16934153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 213
Target Start/End: Complemental strand, 22780438 - 22780383
Alignment:
Q  158 tatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||||||||| |||||||||||||||| | ||||||| |||||||| ||||    
T  22780438 tatagtggattggagggctgctctctcccccagactaggtcagattggaccgaact 22780383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 213
Target Start/End: Complemental strand, 22782803 - 22782748
Alignment:
Q  158 tatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||||||||| |||||||||||||||| | ||||||| |||||||| ||||    
T  22782803 tatagtggattggagggctgctctctcccccagactaggtcagattggaccgaact 22782748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 195
Target Start/End: Complemental strand, 39593910 - 39593761
Alignment:
Q  44 tttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccctt 143  Q
    ||||||||||||||||||||| || ||  |||||| | ||| |||||||| ||| || | |||||||||||| || |||  ||||||||||| ||   ||    
T  39593910 tttctcttaggattcattgtgggtttgagtgacttgacaaaggggtagaaattaggt-tgattctttgtgagtttgtaaactaatttcttgtaacttatt 39593812  T
Q  144 tgtatcactttcattatagtggattggagagctgctctctcccccatagtag 195  Q
    ||||||||| | || |||||| | ||||||| | |||||||||||| |||||    
T  39593811 tgtatcactcttatcatagtgaagtggagagat-ctctctcccccagagtag 39593761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 213
Target Start/End: Complemental strand, 44599903 - 44599848
Alignment:
Q  158 tatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||||||||| |||||||||||||||| | ||||||| |||||||| ||||    
T  44599903 tatagtggattggagggctgctctctcccccagactaggtcagattggaccgaact 44599848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 154 - 207
Target Start/End: Complemental strand, 5336850 - 5336796
Alignment:
Q  154 tcattatagtggattggagagctgctctctcccccatagtaggtc-atattggac 207  Q
    |||||||||||||  ||||||||||||||||||| |||||||||| |||||||||    
T  5336850 tcattatagtggaacggagagctgctctctcccctatagtaggtcaatattggac 5336796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 154 - 200
Target Start/End: Original strand, 18587078 - 18587124
Alignment:
Q  154 tcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    |||||||||||||| ||||||||||||||||||||| | ||||||||    
T  18587078 tcattatagtggatcggagagctgctctctcccccagactaggtcat 18587124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 205
Target Start/End: Complemental strand, 3814108 - 3814046
Alignment:
Q  142 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    |||||| ||||||||  ||| ||||||||||||||||||||||||||| | |||| ||||||||    
T  3814108 tttgtaacactttcac-atattggattggagagctgctctctcccccagattaggccatattgg 3814046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 213
Target Start/End: Original strand, 5198688 - 5198743
Alignment:
Q  158 tatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||||||||| |||||||||||||||| | |||||||  ||||||| ||||    
T  5198688 tatagtggattggagggctgctctctcccccagactaggtcaatttggaccgaact 5198743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 205
Target Start/End: Complemental strand, 5732749 - 5732687
Alignment:
Q  142 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    |||||| ||||||| | ||| ||||||||||||||||||||||||||| | |||| ||||||||    
T  5732749 tttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 5732687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 213
Target Start/End: Original strand, 6765112 - 6765167
Alignment:
Q  158 tatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||||||||| |||||||||||||||| | |||||||  ||||||| ||||    
T  6765112 tatagtggattggagggctgctctctcccccagactaggtcaatttggaccgaact 6765167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 213
Target Start/End: Original strand, 7941591 - 7941646
Alignment:
Q  158 tatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||||||||| |||||||||||||||| | |||||||  ||||||| ||||    
T  7941591 tatagtggattggagggctgctctctcccccagactaggtcaatttggaccgaact 7941646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 213
Target Start/End: Original strand, 8689498 - 8689566
Alignment:
Q  143 ttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||| ||||||||| ||||||||| |||||||| ||||  |||||||| ||| |||||||||||| ||||    
T  8689498 ttgtaacactttcatcatagtggataggagagctcctct--cccccatattagatcatattggaccgaact 8689566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 205
Target Start/End: Original strand, 9224408 - 9224470
Alignment:
Q  142 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    |||||| ||||||| | ||| ||||||||||||||||||||||||||| | |||| ||||||||    
T  9224408 tttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 9224470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 205
Target Start/End: Original strand, 9229195 - 9229257
Alignment:
Q  142 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    |||||| ||||||| | ||| ||||||||||||||||||||||||||| | |||| ||||||||    
T  9229195 tttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 9229257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 213
Target Start/End: Complemental strand, 11008633 - 11008578
Alignment:
Q  158 tatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||||||||| |||||||||||||||| | |||||||  ||||||| ||||    
T  11008633 tatagtggattggagggctgctctctcccccagactaggtcaatttggaccgaact 11008578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 154 - 201
Target Start/End: Original strand, 16631295 - 16631342
Alignment:
Q  154 tcattatagtggattggagagctgctctctcccccatagtaggtcata 201  Q
    |||||||||||||  |||||||| |||||||||||| |||||||||||    
T  16631295 tcattatagtggaacggagagctactctctcccccagagtaggtcata 16631342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 213
Target Start/End: Complemental strand, 18709229 - 18709174
Alignment:
Q  158 tatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    |||||||||||||||  ||||||||||||||| | ||||||| |||||||| ||||    
T  18709229 tatagtggattggaggactgctctctcccccagactaggtcagattggaccgaact 18709174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 213
Target Start/End: Complemental strand, 22132457 - 22132402
Alignment:
Q  158 tatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||||||||| |||||||||||||| ||| |||||||  ||||||| ||||    
T  22132457 tatagtggattggagggctgctctctcccctatactaggtcaatttggaccgaact 22132402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 213
Target Start/End: Original strand, 24348486 - 24348541
Alignment:
Q  158 tatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    |||||||||| |||| |||||||||||||||||| |||||||  ||||||| ||||    
T  24348486 tatagtggatcggagggctgctctctcccccatactaggtcaatttggaccgaact 24348541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 43 - 93
Target Start/End: Complemental strand, 36175290 - 36175242
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaa 93  Q
    ||||||| ||||||||||||||||||||  ||||||| |||||||||||||    
T  36175290 ttttctcataggattcattgtgagtgtg--tgacttagaaaatgggtagaa 36175242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 213
Target Start/End: Original strand, 38409472 - 38409527
Alignment:
Q  158 tatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    |||||||||| |||| |||||||||||||||||| |||||||  ||||||| ||||    
T  38409472 tatagtggatcggagggctgctctctcccccatactaggtcaatttggaccgaact 38409527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 205
Target Start/End: Complemental strand, 51520541 - 51520479
Alignment:
Q  142 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    |||||| ||||||| | ||| ||||||||||||||||||||||||||| | |||| ||||||||    
T  51520541 tttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 51520479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 153 - 200
Target Start/End: Original strand, 55822375 - 55822421
Alignment:
Q  153 ttcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    ||||||||||||||| ||||||||||||||| ||||||| ||||||||    
T  55822375 ttcattatagtggatcggagagctgctctct-ccccatactaggtcat 55822421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 205
Target Start/End: Original strand, 56146712 - 56146774
Alignment:
Q  142 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    |||||| ||||||| | ||| ||||||||||||||||||||||||||| | |||| ||||||||    
T  56146712 tttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 56146774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 200
Target Start/End: Original strand, 4884986 - 4885032
Alignment:
Q  154 tcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    |||||||||||||  ||||||||||||||||||||| | ||||||||    
T  4884986 tcattatagtggaacggagagctgctctctcccccagactaggtcat 4885032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 200
Target Start/End: Original strand, 8529379 - 8529425
Alignment:
Q  154 tcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    |||||||||||||  ||||||||||||||||||||| | ||||||||    
T  8529379 tcattatagtggaacggagagctgctctctcccccagactaggtcat 8529425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 9176539 - 9176489
Alignment:
Q  158 tatagtggattggagagctgctctctcccccatagtaggtcatattggacc 208  Q
    ||||||||||||||| |||||||||||||||| | |||||||  |||||||    
T  9176539 tatagtggattggagggctgctctctcccccagactaggtcaatttggacc 9176489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 200
Target Start/End: Original strand, 15831253 - 15831299
Alignment:
Q  154 tcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    |||||||||||||  ||||||||||||||||||||| | ||||||||    
T  15831253 tcattatagtggaacggagagctgctctctcccccagactaggtcat 15831299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 200
Target Start/End: Complemental strand, 18537543 - 18537497
Alignment:
Q  154 tcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    |||||||||||||  |||| |||||||||||||||||| ||||||||    
T  18537543 tcattatagtggaacggagggctgctctctcccccataataggtcat 18537497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 205
Target Start/End: Complemental strand, 18855791 - 18855749
Alignment:
Q  163 tggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    ||||||||||||||||||||||||||| | |||| ||||||||    
T  18855791 tggattggagagctgctctctcccccagattaggccatattgg 18855749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 200
Target Start/End: Complemental strand, 25614026 - 25613980
Alignment:
Q  154 tcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    |||||||| ||||  ||||||||||||||||||||| ||||||||||    
T  25614026 tcattataatggaaaggagagctgctctctcccccagagtaggtcat 25613980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 200
Target Start/End: Original strand, 36769591 - 36769637
Alignment:
Q  154 tcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    |||||||||||||  ||||||||||||||||||||| | ||||||||    
T  36769591 tcattatagtggaacggagagctgctctctcccccagactaggtcat 36769637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 154 - 187
Target Start/End: Original strand, 10113134 - 10113167
Alignment:
Q  154 tcattatagtggattggagagctgctctctcccc 187  Q
    ||||||||||||| ||||||||||||||||||||    
T  10113134 tcattatagtggaatggagagctgctctctcccc 10113167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 219
Target Start/End: Complemental strand, 11006302 - 11006241
Alignment:
Q  158 tatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggtta 219  Q
    |||||||||| |||| |||||||||||||||| | |||||||  ||||||| |||| |||||    
T  11006302 tatagtggatcggagggctgctctctcccccagactaggtcaatttggaccgaactaggtta 11006241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 154 - 199
Target Start/End: Original strand, 12102352 - 12102397
Alignment:
Q  154 tcattatagtggattggagagctgctctctcccccatagtaggtca 199  Q
    |||||||||||||  |||| |||||||||||||||||| |||||||    
T  12102352 tcattatagtggaacggagggctgctctctcccccatactaggtca 12102397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 154 - 191
Target Start/End: Complemental strand, 13072051 - 13072014
Alignment:
Q  154 tcattatagtggattggagagctgctctctcccccata 191  Q
    |||||||||| || ||||||||||||||||||||||||    
T  13072051 tcattatagtagaatggagagctgctctctcccccata 13072014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 183
Target Start/End: Original strand, 873431 - 873571
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccct 142  Q
    |||||||||| || | | ||||| ||||| |||||  ||| ||| |||||| ||| |  || || |||| ||||||||||| ||||||||||| |||  |    
T  873431 ttttctcttaagacttaatgtgactgtgggtgactcgaaatatgagtagaaattaggatttgttatttgcgagcttttaagttaatttcttgtaacctat 873530  T
Q  143 ttgtatcactttcattatagtggattggagagctgctctct 183  Q
    | |||||| | | || ||||||||| |||||| ||||||||    
T  873531 tggtatcattctaatcatagtggatcggagagttgctctct 873571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 200
Target Start/End: Complemental strand, 4556128 - 4556084
Alignment:
Q  156 attatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    |||||||||||  ||||||||||||||||||||| | ||||||||    
T  4556128 attatagtggaacggagagctgctctctcccccagactaggtcat 4556084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 213
Target Start/End: Original strand, 19096162 - 19096206
Alignment:
Q  169 ggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||||||||||||||| | |||||||  ||||||||||||    
T  19096162 ggagagctgctctctcccccagactaggtcaatttggaccaaact 19096206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 94; Significance: 6e-46; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 43 - 240
Target Start/End: Original strand, 7160817 - 7161012
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccct 142  Q
    |||||||||||||||||||| |||||| | |||||||||||||  |||||| ||||||||| ||||||||||||||| ||  |||||| |||| ||||||    
T  7160817 ttttctcttaggattcattgagagtgtag-tgacttaaaaaatatgtagaaattaagtcttgttctttgtgagctttaaatctaattttttgtaacccct 7160915  T
Q  143 ttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgttt 240  Q
    |||||||||||||||   ||||||||||||||||| ||||||||| |||||||||||||||| | |||||| | |||||| | |||| ||||||||||    
T  7160916 ttgtatcactttcatctgagtggattggagagctgatctctcccctatagtaggtcatattgaatcaaactggattacca-ttttggtgtgtttgttt 7161012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 44 - 213
Target Start/End: Original strand, 33030854 - 33031023
Alignment:
Q  44 tttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccctt 143  Q
    ||||||||||||||||||| |||||||  |||||| |||||||||||||| ||| || || ||||||||||||||||||| ||||||||||| ||||| |    
T  33030854 tttctcttaggattcattgagagtgtgagtgacttgaaaaatgggtagaaattatgttttgttctttgtgagcttttaagctaatttcttgtaaccccat 33030953  T
Q  144 tgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    || |||||||||||  ||||| |||||||||||||||||||||||| |||| |||||||| |||| ||||    
T  33030954 tgcatcactttcatcttagtgaattggagagctgctctctcccccagagtatgtcatatttgaccgaact 33031023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 11181745 - 11181941
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattc-tttgtgagcttttaaggtaatttcttgttacccc 141  Q
    ||||||||||||||||||||||||||||| |||| | |||| ||||||||| ||| ||||| ||| |||| ||||||||| | ||||||||||| || |     
T  11181745 ttttctcttaggattcattgtgagtgtgggtgacatgaaaa-tgggtagaaattaggtcttgttcatttgagagcttttaggctaatttcttgtaactca 11181843  T
Q  142 tttgtatcactttcattatagtggattggagagctgctctctccccc-atagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgtt 239  Q
    ||||||||||||||||  ||||||||||||| | ||||||||||||| | ||||||||||||| |||| |||| |||||||| |||||| |||||||||    
T  11181844 tttgtatcactttcatcttagtggattggagggttgctctctccccctagagtaggtcatattagaccgaactaggttacca-tcttggtgtgtttgtt 11181941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 43 - 219
Target Start/End: Complemental strand, 2630415 - 2630239
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccct 142  Q
    |||||||||||||||||||||||||| || |||||| |||||||  || || ||| || || ||||||||| | ||||||| |||||| |||| |||| |    
T  2630415 ttttctcttaggattcattgtgagtgagggtgacttgaaaaatgtataaaaattaggttttgttctttgtgtgtttttaagctaatttattgtaaccctt 2630316  T
Q  143 ttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggtta 219  Q
    ||||||||||||||| ||||||||||| ||||||||| |||||| || || ||||||||||||||| |||| |||||    
T  2630315 ttgtatcactttcatcatagtggattgaagagctgctatctccctcaaagcaggtcatattggaccgaactaggtta 2630239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 43 - 213
Target Start/End: Complemental strand, 10281936 - 10281765
Alignment:
Q  43 ttttctcttaggattcat--tgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacc 139  Q
    ||||||||||||||||||  ||||||||||| ||||  | ||||||||||||| ||| ||||| ||||| ||| ||||| |||| ||||||||||| ||     
T  10281936 ttttctcttaggattcatattgtgagtgtgggtgac--acaaaatgggtagaaattaggtcttgttcttgtgtaagcttgtaagctaatttcttgtaact 10281839  T
Q  140 cctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    | |||||| ||||||||| ||||||||||||||||||||||||||||||| |  ||||||||||||||| ||||    
T  10281838 cttttgtaacactttcatcatagtggattggagagctgctctctcccccagatcaggtcatattggaccgaact 10281765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 43 - 213
Target Start/End: Complemental strand, 6742036 - 6741866
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccct 142  Q
    |||| ||||||||||||||| |||||||| |||||| ||||||| |||||| ||| || || ||||||||||| ||  ||| ||||||||||| ||  ||    
T  6742036 ttttttcttaggattcattgagagtgtgggtgacttgaaaaatgagtagaaattaggttttgttctttgtgagtttgcaagctaatttcttgtaacttct 6741937  T
Q  143 ttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||||| |||  || ||||||||||||||||||| ||||||| |||| ||||||||| ||| ||||    
T  6741936 ttgtatcacttccatcttaatggattggagagctgctctatcccccagagtatgtcatattgaaccgaact 6741866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 43 - 239
Target Start/End: Complemental strand, 19588929 - 19588734
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccc 141  Q
    |||||||||||||||||||| || ||||| ||||  |||||  |||||||| ||| ||||| ||||| ||| ||||| |||||||||||||||| || |     
T  19588929 ttttctcttaggattcattgagattgtgggtgacacaaaaa--gggtagaaattaggtcttgttcttgtgtaagcttataaggtaatttcttgtaactct 19588832  T
Q  142 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgtt 239  Q
    |||||| ||||||||| |||||||||||||| |||||||||||||  | | ||| |||||||||||| |||| ||| | || |||| |||||||||||    
T  19588831 tttgtaacactttcatcatagtggattggagggctgctctctccctaagattagttcatattggaccgaactgggtcaacaatctttgagtgtttgtt 19588734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 81 - 239
Target Start/End: Original strand, 11916922 - 11917081
Alignment:
Q  81 aaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgct 179  Q
    ||||||||||||| ||| ||||| ||||| ||| |||||  ||  || |||||||| || | |||||| |||||||||||||||||||||||||||||||    
T  11916922 aaaatgggtagaaattaggtcttgttcttgtgtaagcttgcaaactattttcttgtaactcttttgtaacactttcattatagtggattggagagctgct 11917021  T
Q  180 ctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgtt 239  Q
    |||||||||||| |||||||||||||||| |||| ||| | || ||| || |||||||||    
T  11917022 ctctcccccatattaggtcatattggaccgaactgggtcaacaatctcggtgtgtttgtt 11917081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 82 - 213
Target Start/End: Original strand, 12084127 - 12084258
Alignment:
Q  82 aaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgctc 180  Q
    |||||||||||| ||| ||||| ||||| ||| |||||||||| ||||||||||| || | |||||| ||||||||| ||||||||||||||||||||||    
T  12084127 aaatgggtagaaattaggtcttgttcttgtgtaagcttttaagttaatttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctc 12084225  T
Q  181 tctcccccatagtaggtcatattggaccaaact 213  Q
    ||| ||||||| ||||||||| |||||| ||||    
T  12084226 tctgccccatattaggtcatagtggaccgaact 12084258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 43 - 241
Target Start/End: Complemental strand, 28832441 - 28832245
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccct 142  Q
    |||||||||||||||||||| |||||||| |||  | |||||||||||||| |||   ||| |||||| ||  ||| |||| ||||||||||| || | |    
T  28832441 ttttctcttaggattcattgagagtgtgggtgatatgaaaaatgggtagaaattagaacttgttcttt-tgtacttataagctaatttcttgtaactcat 28832343  T
Q  143 ttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgtttg 241  Q
    | ||| |||||||||  ||||||||||||| |||||||||||||||| | |||||||||||||||| |||  ||| | || |||||| |||||||||||    
T  28832342 t-gtaacactttcatcttagtggattggagggctgctctctcccccagattaggtcatattggaccgaaccgggtcaacaatcttggtgtgtttgtttg 28832245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 41 - 207
Target Start/End: Complemental strand, 3880486 - 3880319
Alignment:
Q  41 ttttttctcttaggattcat--tgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgtta 137  Q
    ||||||||| ||||||||||  |||||| |||| ||||  | ||||||||||||| ||| ||||| ||||| ||| ||||| |||  ||||||||||| |    
T  3880486 ttttttctcctaggattcatattgtgagagtgggtgac--acaaaatgggtagaaattaggtcttgttcttgtgtaagcttgtaaactaatttcttgtaa 3880389  T
Q  138 cccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggac 207  Q
    | | |||||| ||||||||| ||||||||||||||||||||||||| || || | |||||||||||||||    
T  3880388 ctcttttgtaacactttcatcatagtggattggagagctgctctctgcctcagattaggtcatattggac 3880319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 82 - 239
Target Start/End: Original strand, 17003911 - 17004069
Alignment:
Q  82 aaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgctc 180  Q
    |||||||||||| ||| ||||| ||||| ||| ||||| |||| |||||| |||| || | |||| |  |||||||| ||||||||||| ||||||||||    
T  17003911 aaatgggtagaaattaggtcttgttcttgtgtaagcttgtaagttaattttttgtaactcttttgaaatactttcatcatagtggattgaagagctgctc 17004010  T
Q  181 tctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgtt 239  Q
    ||||||||| | |||||||||||||||| |||| ||| | || |||||| |||||||||    
T  17004011 tctcccccagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgtt 17004069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 42127323 - 42127519
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattcttt-gtgagcttttaaggtaatttcttgttacccc 141  Q
    |||||||||||||||||||| |||||||| |||  | ||||||||||||||  || | ||| |||||| || ||||| |||| ||||||||||| || |     
T  42127323 ttttctcttaggattcattgagagtgtgggtgatatgaaaaatgggtagaaagtaggacttgttcttttgtaagcttataagctaatttcttgtaactca 42127422  T
Q  142 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgtt 239  Q
    || ||| |||||||||  ||||||||||| | |||||||||||||||| | ||||||||||| || | |||| ||| | || |||||| |||||||||    
T  42127423 tt-gtaacactttcatcttagtggattggggggctgctctctcccccagattaggtcatattagatcgaactgggtcaacaatcttggtgtgtttgtt 42127519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 141 - 213
Target Start/End: Original strand, 9353343 - 9353415
Alignment:
Q  141 ctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||| ||||    
T  9353343 ctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaact 9353415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 141 - 213
Target Start/End: Original strand, 36932361 - 36932433
Alignment:
Q  141 ctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||| ||||    
T  36932361 ctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaact 36932433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 213
Target Start/End: Complemental strand, 15464618 - 15464546
Alignment:
Q  141 ctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||| | ||| |||||||||||| ||||    
T  15464618 ctttgtaacactttcatcatagtggattggagagctgctctctcccccagattagatcatattggaccgaact 15464546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 139 - 205
Target Start/End: Complemental strand, 38192261 - 38192195
Alignment:
Q  139 ccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||| | |||| ||||||||    
T  38192261 ccctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggccatattgg 38192195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 139 - 205
Target Start/End: Complemental strand, 38219486 - 38219420
Alignment:
Q  139 ccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||| | |||| ||||||||    
T  38219486 ccctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggccatattgg 38219420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 82 - 213
Target Start/End: Complemental strand, 14520375 - 14520244
Alignment:
Q  82 aaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgctc 180  Q
    |||||||||||| ||| ||||| ||||| ||| |||||  ||| || |||||||| || | |||||| ||||||||| ||||||||||| ||||||||||    
T  14520375 aaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagctattttcttgtaactc-tttgtaacactttcatcatagtggattgaagagctgctc 14520277  T
Q  181 tctcccccatagtaggtcatattggaccaaact 213  Q
    || |||| | | |||||||||||||||| ||||    
T  14520276 tcccccctagattaggtcatattggaccgaact 14520244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 205
Target Start/End: Complemental strand, 35387750 - 35387684
Alignment:
Q  139 ccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    ||||||||| ||||||||| ||||| ||||||||||||||||||||||||| | |||| ||||||||    
T  35387750 ccctttgtaacactttcatcatagtagattggagagctgctctctcccccagattaggccatattgg 35387684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 213
Target Start/End: Original strand, 4410236 - 4410291
Alignment:
Q  158 tatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    |||||||||||||||||||||||||||||||| | ||||||| |||||||| ||||    
T  4410236 tatagtggattggagagctgctctctcccccagactaggtcagattggaccgaact 4410291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 239
Target Start/End: Original strand, 31300615 - 31300705
Alignment:
Q  149 cactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgtt 239  Q
    |||||||||  ||||||||||||||| | ||||||||| || | |||||||||||||||| |||| ||| | || |||||| |||||||||    
T  31300615 cactttcatcttagtggattggagagtttctctctccctcagactaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgtt 31300705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 200
Target Start/End: Original strand, 1170921 - 1170968
Alignment:
Q  153 ttcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    ||||||||||||||| ||||||||||||||||||||| | ||||||||    
T  1170921 ttcattatagtggatcggagagctgctctctcccccagactaggtcat 1170968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 205
Target Start/End: Complemental strand, 15044770 - 15044708
Alignment:
Q  142 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    |||||| ||||||| | ||| ||||||||||||||||||||||||||||| |||| ||||||||    
T  15044770 tttgtaacactttc-tcatattggattggagagctgctctctcccccatattaggccatattgg 15044708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 213
Target Start/End: Original strand, 15552459 - 15552514
Alignment:
Q  158 tatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||||||||| |||||||||||||||| | ||||||| |||||||| ||||    
T  15552459 tatagtggattggagggctgctctctcccccagactaggtcagattggaccgaact 15552514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 213
Target Start/End: Complemental strand, 31179436 - 31179381
Alignment:
Q  158 tatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||||||||| |||||||||||||||| | ||||||| |||||||| ||||    
T  31179436 tatagtggattggagggctgctctctcccccagactaggtcagattggaccgaact 31179381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 213
Target Start/End: Original strand, 31542948 - 31543003
Alignment:
Q  158 tatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||||||||| |||||||||||||||| | ||||||| |||||||| ||||    
T  31542948 tatagtggattggagggctgctctctcccccagactaggtcagattggaccgaact 31543003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 213
Target Start/End: Original strand, 31545294 - 31545349
Alignment:
Q  158 tatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||||||||| |||||||||||||||| | ||||||| |||||||| ||||    
T  31545294 tatagtggattggagggctgctctctcccccagactaggtcagattggaccgaact 31545349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 154 - 200
Target Start/End: Original strand, 22672946 - 22672992
Alignment:
Q  154 tcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    |||||||||||||| ||||||||||||||||||||| | ||||||||    
T  22672946 tcattatagtggatcggagagctgctctctcccccagactaggtcat 22672992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 139 - 205
Target Start/End: Complemental strand, 24135936 - 24135870
Alignment:
Q  139 ccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    ||||||||| |||||||||  ||||| |||||| ||||||||||||||||| | |||| ||||||||    
T  24135936 ccctttgtaacactttcatcttagtgcattggatagctgctctctcccccagattaggccatattgg 24135870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 154 - 200
Target Start/End: Original strand, 25445608 - 25445654
Alignment:
Q  154 tcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    |||||||||||||| ||||||||||||||||||||| | ||||||||    
T  25445608 tcattatagtggatcggagagctgctctctcccccagactaggtcat 25445654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 139 - 205
Target Start/End: Complemental strand, 31180301 - 31180236
Alignment:
Q  139 ccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    ||||||||| ||||||| | ||| ||||||||||||||||||||||||||| | |||| ||||||||    
T  31180301 ccctttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 31180236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 154 - 200
Target Start/End: Complemental strand, 35385522 - 35385476
Alignment:
Q  154 tcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    |||||||||||||| ||||||||||||||||||||| | ||||||||    
T  35385522 tcattatagtggatcggagagctgctctctcccccagactaggtcat 35385476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 186
Target Start/End: Complemental strand, 34842785 - 34842644
Alignment:
Q  45 ttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttaccccttt 144  Q
    ||||||||| |||||||||| || |   |||||| ||||||| |||||| ||| |   | ||||| |||||||| |||| |||  |||||| ||| ||||    
T  34842785 ttctcttagaattcattgtgggttttagtgacttgaaaaatgagtagaaattaggatatgttcttggtgagcttgtaagataacatcttgtaacctcttt 34842686  T
Q  145 gtatcactttcatta--tagtggattggagagctgctctctccc 186  Q
    ||||||||  |||||  ||||||||| |||||||||||||||||    
T  34842685 gtatcact--cattacatagtggattagagagctgctctctccc 34842644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 213
Target Start/End: Complemental strand, 3373202 - 3373147
Alignment:
Q  158 tatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||||||||| | |||||||||||||| | ||||||| |||||||| ||||    
T  3373202 tatagtggattggagggttgctctctcccccagactaggtcagattggaccgaact 3373147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 171 - 217
Target Start/End: Original strand, 29748577 - 29748624
Alignment:
Q  171 agagctgctctctcccccatagtaggtca-tattggaccaaacttggt 217  Q
    ||||||||||||||||||| ||||||||| ||||||||| ||||||||    
T  29748577 agagctgctctctcccccaaagtaggtcagtattggaccgaacttggt 29748624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 205
Target Start/End: Complemental strand, 43592363 - 43592301
Alignment:
Q  142 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    |||||| ||||||| | ||| ||||||||||||||||||||||||||| | |||| ||||||||    
T  43592363 tttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 43592301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 205
Target Start/End: Complemental strand, 43598808 - 43598746
Alignment:
Q  142 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    |||||| ||||||| | ||| ||||||||||||||||||||||||||| | |||| ||||||||    
T  43598808 tttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 43598746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 205
Target Start/End: Complemental strand, 43604300 - 43604238
Alignment:
Q  142 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    |||||| ||||||| | ||| ||||||||||||||||||||||||||| | |||| ||||||||    
T  43604300 tttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 43604238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 205
Target Start/End: Complemental strand, 43609792 - 43609730
Alignment:
Q  142 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    |||||| ||||||| | ||| ||||||||||||||||||||||||||| | |||| ||||||||    
T  43609792 tttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 43609730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 200
Target Start/End: Complemental strand, 2298071 - 2298025
Alignment:
Q  154 tcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    |||||||||||||| |||||||||||||| |||||| | ||||||||    
T  2298071 tcattatagtggatcggagagctgctctcccccccagactaggtcat 2298025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 200
Target Start/End: Original strand, 10627478 - 10627524
Alignment:
Q  154 tcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    |||||||||||||  ||||||||||||||||||| | ||||||||||    
T  10627478 tcattatagtggaacggagagctgctctctcccctagagtaggtcat 10627524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 10749915 - 10749969
Alignment:
Q  159 atagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||| |||| |||||||||||||||| | ||||||| |||||||| ||||    
T  10749915 atagtggatcggagggctgctctctcccccagactaggtcagattggaccgaact 10749969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 213
Target Start/End: Complemental strand, 15354639 - 15354585
Alignment:
Q  159 atagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||| |||| |||||||||||||||| | ||||||| |||||||| ||||    
T  15354639 atagtggatcggagggctgctctctcccccagactaggtcagattggaccgaact 15354585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 200
Target Start/End: Original strand, 25452607 - 25452653
Alignment:
Q  154 tcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    ||||||||||||||  |||||||||||||||||||| | ||||||||    
T  25452607 tcattatagtggatcagagagctgctctctcccccagaataggtcat 25452653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 189
Target Start/End: Complemental strand, 30631493 - 30631444
Alignment:
Q  139 ccctttgtatcactttcattatagtggattggagagctgctctctccccca 189  Q
    ||||||||| ||||||| | ||| |||||||||||||||||||||||||||    
T  30631493 ccctttgtaacactttc-tcatattggattggagagctgctctctccccca 30631444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 205
Target Start/End: Original strand, 31401871 - 31401913
Alignment:
Q  163 tggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    ||||||||||||||||||||||||||||| |||| || |||||    
T  31401871 tggattggagagctgctctctcccccatattaggccacattgg 31401913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 213
Target Start/End: Complemental strand, 38960196 - 38960142
Alignment:
Q  159 atagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||| |||| |||||||||||||||| | ||||||| |||||||| ||||    
T  38960196 atagtggatcggagggctgctctctcccccaaactaggtcagattggaccgaact 38960142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 200
Target Start/End: Original strand, 42238372 - 42238418
Alignment:
Q  154 tcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    |||||||||||||  ||||||||||||||||||||| | ||||||||    
T  42238372 tcattatagtggaacggagagctgctctctcccccagactaggtcat 42238418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 80 - 154
Target Start/End: Original strand, 33831693 - 33831768
Alignment:
Q  80 aaaaatgggtagaagttaagtcttattctttgtgagctt--ttaaggtaatttcttgttacccctttgtatcacttt 154  Q
    |||||||||||||| ||| || || ||||||||||||||  ||||| ||||||||||| |||| |||||||| ||||    
T  33831693 aaaaatgggtagaaattaggt-ttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatctcttt 33831768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 24553520 - 24553615
Alignment:
Q  143 ttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgtt 239  Q
    ||||| |||||||||  ||||||| ||||| |||||||||||||  | | |||||||||||||||| |||| | | | || |||||| |||||||||    
T  24553520 ttgtaacactttcatcttagtggagtggag-gctgctctctcccatagattaggtcatattggaccgaactggatcaacaatcttggtgtgtttgtt 24553615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 187
Target Start/End: Complemental strand, 36263877 - 36263849
Alignment:
Q  159 atagtggattggagagctgctctctcccc 187  Q
    |||||||||||||||||||||||||||||    
T  36263877 atagtggattggagagctgctctctcccc 36263849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 93; Significance: 2e-45; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 43 - 207
Target Start/End: Original strand, 9054750 - 9054914
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccct 142  Q
    |||||||||||||||||||| |||||||  |||||| |||||||||||||| |||  | || ||||||||| ||||||||| ||||||||||| ||| ||    
T  9054750 ttttctcttaggattcattgagagtgtgagtgacttgaaaaatgggtagaaattagattttgttctttgtgcgcttttaagctaatttcttgtaaccact 9054849  T
Q  143 ttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggac 207  Q
    |||||||||||||||  ||||||||| |||||||||||||||| ||| |||||||||||||||||    
T  9054850 ttgtatcactttcatcttagtggattagagagctgctctctcctccagagtaggtcatattggac 9054914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 43 - 228
Target Start/End: Original strand, 5990474 - 5990657
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccct 142  Q
    ||||||||||||||||||||  ||||||| |||||| ||||||||||  || | | ||| | ||||||||||||||||||| ||||||||||| ||  ||    
T  5990474 ttttctcttaggattcattgaaagtgtgggtgacttgaaaaatgggtgaaaatgaggtcgtgttctttgtgagcttttaagctaatttcttgtaacatct 5990573  T
Q  143 ttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggttaccagtcttg 228  Q
    |||||||||||||||  ||||  |||||||||| ||||||||||||| | || ||||||||||||||||||| ||||||| |||||    
T  5990574 ttgtatcactttcatcttagt-aattggagagccgctctctcccccacaatatgtcatattggaccaaactt-gttaccaatcttg 5990657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 44 - 208
Target Start/End: Complemental strand, 3051303 - 3051139
Alignment:
Q  44 tttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccctt 143  Q
    ||||||||||||||||||| ||||||   |||| | |||||||||||||| |||||| || ||||||||||||| ||| | ||||||||||| || | ||    
T  3051303 tttctcttaggattcattgagagtgtaagtgacatgaaaaatgggtagaaattaagttttgttctttgtgagctcttatgctaatttcttgtaactcatt 3051204  T
Q  144 tgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggacc 208  Q
    ||||||||||||||  ||||||||||||||| |||||||||| ||| || |||| ||||| ||||    
T  3051203 tgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagacc 3051139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 43 - 236
Target Start/End: Complemental strand, 28307746 - 28307552
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaagg-taatttcttgttacccc 141  Q
    |||||| |||||||||| || |||||||| |||||| | ||||| ||||||  || ||||| |||||| |||||||||||   ||||||||||| ||||     
T  28307746 ttttcttttaggattcagtgagagtgtgggtgacttgagaaatgtgtagaaagtaggtcttgttctttatgagcttttaaaactaatttcttgtaaccca 28307647  T
Q  142 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgttt 236  Q
    | ||||| |||| |||  |||||||||||||||||||||||  ||||| |||||||||| ||||||| |||| |||||||| |||||| ||||||    
T  28307646 tgtgtattacttccatcttagtggattggagagctgctctcatccccagagtaggtcattttggaccgaactgggttaccaatcttggcgtgttt 28307552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 43 - 213
Target Start/End: Complemental strand, 6127407 - 6127235
Alignment:
Q  43 ttttctcttaggattcattgt---gagtgtggatgacttaaaaaatgggtagaagttaagtcttattcttt-gtgagcttttaaggtaatttcttgttac 138  Q
    ||||||||||||||||||| |   |||||||| ||||  | ||||||||||||| ||| ||||| |||||| || ||||| |||| ||||||||||| ||    
T  6127407 ttttctcttaggattcattattgagagtgtgggtgac--acaaaatgggtagaaattaggtcttgttcttttgtaagcttataagctaatttcttgtaac 6127310  T
Q  139 ccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
     | |||||| ||||||||| ||||||||||||||||||||||||| ||||| | |||||||||||||||| ||||    
T  6127309 tcttttgtaacactttcatcatagtggattggagagctgctctcttccccaaattaggtcatattggaccgaact 6127235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 81 - 239
Target Start/End: Original strand, 23799527 - 23799686
Alignment:
Q  81 aaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgct 179  Q
    ||||||||||||| ||| ||||| ||||| ||| ||||| |||| ||||||||||| || | |||||| ||||||||| |||||||||||||| ||||||    
T  23799527 aaaatgggtagaaattaggtcttgttcttgtgtaagcttgtaagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgct 23799626  T
Q  180 ctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgtt 239  Q
    |||||| ||| | |||||||||||||||| |||| ||| | || |||||| |||||||||    
T  23799627 ctctcctccaaattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgtt 23799686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 42 - 239
Target Start/End: Original strand, 5702393 - 5702592
Alignment:
Q  42 tttttctcttaggattcattgt---gagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgtta 137  Q
    |||||||||||||||||||| |   |||||||| ||||| ||||  ||||||||| ||| || ||  |||| ||| ||||| |||| ||||||||||| |    
T  5702393 tttttctcttaggattcattattgagagtgtgggtgactcaaaa--tgggtagaaattaggttttgctcttgtgtaagcttataagctaatttcttgtaa 5702490  T
Q  138 cccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttg 237  Q
    | | |||||| ||||||||| |||| ||||||||| | |||||||||||||||| |||||||||||||||| |||| ||| | || |||||| |||||||    
T  5702491 ctcttttgtaacactttcatcataggggattggagggatgctctctcccccatattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttg 5702590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 73 - 219
Target Start/End: Complemental strand, 6813838 - 6813691
Alignment:
Q  73 tgacttaaaaaatgggtagaag-ttaagtcttattctttgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattgga 171  Q
    |||||| ||||||||||||||  ||| || || ||||||||||||||  ||| ||||||||||| |||||||||| ||||||||||  || |||||||||    
T  6813838 tgacttgaaaaatgggtagaaaattaggttttgttctttgtgagcttgcaagctaatttcttgtaacccctttgtgtcactttcatcttattggattgga 6813739  T
Q  172 gagctgctctctcccccatagtaggtcatattggaccaaacttggtta 219  Q
    |||||||||||||||| |  |||||| |||||||||| |||| |||||    
T  6813738 gagctgctctctcccctagtgtaggttatattggaccgaactgggtta 6813691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 81 - 239
Target Start/End: Original strand, 26403180 - 26403339
Alignment:
Q  81 aaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgct 179  Q
    ||||||||||||| ||| ||||| ||||| ||  ||||| |||| ||||||| | | || | |||||| ||||||||| |||||||||||||||||||||    
T  26403180 aaaatgggtagaaattaggtcttgttcttgtgcaagcttgtaagctaatttcctataactcttttgtaacactttcatcatagtggattggagagctgct 26403279  T
Q  180 ctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgtt 239  Q
    |||||||||| | |||||||||||||||| |||| ||| | || |||||| |||||||||    
T  26403280 ctctcccccagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgtt 26403339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 82 - 213
Target Start/End: Complemental strand, 7412486 - 7412355
Alignment:
Q  82 aaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgctc 180  Q
    |||||||||||| ||| ||||| ||||| ||| |||||  ||| || |||||||| || | |||||| ||||||||| ||||||||||||||||||||||    
T  7412486 aaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagttattttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctc 7412388  T
Q  181 tctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||||| |||||||||||||||| ||||    
T  7412387 tctcccccatattaggtcatattggaccgaact 7412355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 19752306 - 19752503
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaattt-cttgttaccc 140  Q
    |||||||||||||||||||| |||||||| |||  | |||||||||||||| ||| | ||| ||||| ||| |||||  ||| || ||| ||||| || |    
T  19752306 ttttctcttaggattcattgagagtgtgggtgatatgaaaaatgggtagaaattaggacttgttcttgtgtaagcttgcaagctatttttcttgtaactc 19752405  T
Q  141 ctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgtt 239  Q
     || ||| |||||||||  |||||||||||||||||||||||||||| | | |||||||||||||||| |||| ||| | || |||||| |||||||||    
T  19752406 att-gtaacactttcatcttagtggattggagagctgctctctcccctagactaggtcatattggaccgaactaggtcaacaatcttggtgtgtttgtt 19752503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 139 - 213
Target Start/End: Original strand, 31071238 - 31071312
Alignment:
Q  139 ccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||| ||||    
T  31071238 ccctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaact 31071312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 139 - 205
Target Start/End: Original strand, 1261963 - 1262029
Alignment:
Q  139 ccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||    
T  1261963 ccctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattgg 1262029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 128 - 206
Target Start/End: Original strand, 18870560 - 18870638
Alignment:
Q  128 tttcttgttacccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgga 206  Q
    |||||||| |||| |||||| ||||||||||||| ||||||||||||||||||||||||||| | |||| |||||||||    
T  18870560 tttcttgtaacccttttgtaacactttcattatattggattggagagctgctctctcccccagattaggccatattgga 18870638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 128 - 205
Target Start/End: Original strand, 18853166 - 18853243
Alignment:
Q  128 tttcttgttacccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    |||||||| |||| |||||| ||||||||||||| ||||||||||||||||||||||||||| | |||| ||||||||    
T  18853166 tttcttgtaacccttttgtaacactttcattatattggattggagagctgctctctcccccagattaggccatattgg 18853243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 213
Target Start/End: Original strand, 19175765 - 19175837
Alignment:
Q  141 ctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||| ||||||||| |||||||||||||||| |||||||||||||| | |||||||||||||||| ||||    
T  19175765 ctttgtaacactttcatcatagtggattggagagttgctctctcccccagattaggtcatattggaccgaact 19175837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 82 - 208
Target Start/End: Complemental strand, 4456173 - 4456047
Alignment:
Q  82 aaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgctc 180  Q
    |||||||||||| ||| ||||| ||||| ||| |||||   || || ||||||| || | ||||||| ||||||||| ||||||||||||||||||||||    
T  4456173 aaatgggtagaaattatgtcttgttcttgtgtaagcttgccagctattttcttg-taactctttgtaacactttcatcatagtggattggagagctgctc 4456075  T
Q  181 tctcccccatagtaggtcatattggacc 208  Q
    ||||||||| | |||| |||||||||||    
T  4456074 tctcccccagattaggccatattggacc 4456047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 139 - 205
Target Start/End: Original strand, 4760084 - 4760150
Alignment:
Q  139 ccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    ||||||||| ||||||||| ||| ||||||||||||||||||||||||||||| |||| ||||||||    
T  4760084 ccctttgtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattgg 4760150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 43 - 169
Target Start/End: Original strand, 7493086 - 7493212
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccct 142  Q
    |||| |||||||||| |||| |||||||| |||||| |||||  ||||||| ||| || || |||| |||||||||||| | ||||||||| | ||  ||    
T  7493086 ttttttcttaggatttattgagagtgtgggtgacttgaaaaacaggtagaaattaggttttgttctgtgtgagcttttatgttaatttcttataacttct 7493185  T
Q  143 ttgtatcactttcattatagtggattg 169  Q
    |||||||||||||||  ||||||||||    
T  7493186 ttgtatcactttcatcttagtggattg 7493212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 151 - 239
Target Start/End: Original strand, 4696617 - 4696705
Alignment:
Q  151 ctttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgtt 239  Q
    ||||||| |||||||||||||| |||||||||||||||| | |||||||||||||| | |||| ||| | || |||||| |||||||||    
T  4696617 ctttcatcatagtggattggagggctgctctctcccccagattaggtcatattggatcgaactgggtcaacaatcttggtgtgtttgtt 4696705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 9765848 - 9765902
Alignment:
Q  159 atagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||| ||||    
T  9765848 atagtggattggagagctgctctctcccccagattaggtcatattggaccgaact 9765902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 143 - 205
Target Start/End: Complemental strand, 26287985 - 26287923
Alignment:
Q  143 ttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||| | |||| ||||||||    
T  26287985 ttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggccatattgg 26287923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 143 - 205
Target Start/End: Complemental strand, 26301242 - 26301180
Alignment:
Q  143 ttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||| | |||| ||||||||    
T  26301242 ttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggccatattgg 26301180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 143 - 205
Target Start/End: Complemental strand, 26313236 - 26313174
Alignment:
Q  143 ttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||| | |||| ||||||||    
T  26313236 ttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggccatattgg 26313174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 205
Target Start/End: Complemental strand, 36979465 - 36979399
Alignment:
Q  139 ccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    ||||||||| ||||||||| ||| ||||||||||||||||||||||||||| | |||| ||||||||    
T  36979465 ccctttgtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattgg 36979399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 139 - 205
Target Start/End: Original strand, 10689152 - 10689218
Alignment:
Q  139 ccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    |||| |||| ||||||||| ||| ||||||||||||||||||||||||||| | |||| ||||||||    
T  10689152 ccctctgtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattgg 10689218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 24873246 - 24873196
Alignment:
Q  158 tatagtggattggagagctgctctctcccccatagtaggtcatattggacc 208  Q
    ||||||||||||||| |||||||||||||||||| ||||||| ||||||||    
T  24873246 tatagtggattggagggctgctctctcccccatactaggtcagattggacc 24873196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 139 - 205
Target Start/End: Complemental strand, 30655734 - 30655668
Alignment:
Q  139 ccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    ||||||||| ||||||||| ||| | ||||||||||||||||||||||||| | |||| ||||||||    
T  30655734 ccctttgtaacactttcatcatattagattggagagctgctctctcccccagattaggccatattgg 30655668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 73 - 152
Target Start/End: Original strand, 8863569 - 8863646
Alignment:
Q  73 tgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccctttgtatcact 152  Q
    |||||| |||||||||||||| |||||  || ||||  ||||||||||||| ||||||||||| ||| ||||||||||||    
T  8863569 tgacttgaaaaatgggtagaaattaaggtttgttct--gtgagcttttaagttaatttcttgtaacctctttgtatcact 8863646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 154 - 213
Target Start/End: Original strand, 17847785 - 17847845
Alignment:
Q  154 tcattatagtggattggagagctgctctctcccccatagtaggtca-tattggaccaaact 213  Q
    ||||||||||||| ||||| |||||||||||||||| | ||||||| ||||||||||||||    
T  17847785 tcattatagtggaatggagggctgctctctcccccagactaggtcagtattggaccaaact 17847845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 200
Target Start/End: Complemental strand, 16757339 - 16757292
Alignment:
Q  153 ttcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    ||||||||||||||| ||||||||||||||||||||| | ||||||||    
T  16757339 ttcattatagtggatcggagagctgctctctcccccagactaggtcat 16757292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 213
Target Start/End: Original strand, 18813151 - 18813206
Alignment:
Q  158 tatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||||||||| |||||||||||||||||| |||||||  ||||||| ||||    
T  18813151 tatagtggattggagggctgctctctcccccatattaggtcaatttggaccgaact 18813206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 200
Target Start/End: Original strand, 25684753 - 25684800
Alignment:
Q  153 ttcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    ||||||||||||||| ||||||||||||||||||||| | ||||||||    
T  25684753 ttcattatagtggatcggagagctgctctctcccccagactaggtcat 25684800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 213
Target Start/End: Original strand, 43079872 - 43079927
Alignment:
Q  158 tatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||||||||| |||||||||||||||| | ||||||| |||||||| ||||    
T  43079872 tatagtggattggagggctgctctctcccccagactaggtcagattggaccgaact 43079927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 213
Target Start/End: Original strand, 43082243 - 43082298
Alignment:
Q  158 tatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||||||||| |||||||||||||||| | ||||||| |||||||| ||||    
T  43082243 tatagtggattggagggctgctctctcccccagactaggtcagattggaccgaact 43082298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 154 - 200
Target Start/End: Original strand, 28890877 - 28890923
Alignment:
Q  154 tcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    |||||||||||||| ||||||||||||||||||||| | ||||||||    
T  28890877 tcattatagtggatcggagagctgctctctcccccagactaggtcat 28890923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 154 - 200
Target Start/End: Complemental strand, 29554855 - 29554809
Alignment:
Q  154 tcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    |||||||||||||| ||||||||||||||||||||| | ||||||||    
T  29554855 tcattatagtggatcggagagctgctctctcccccagactaggtcat 29554809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 43 - 77
Target Start/End: Original strand, 31513245 - 31513279
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgact 77  Q
    |||||||||||||||||||||||||||||||||||    
T  31513245 ttttctcttaggattcattgtgagtgtggatgact 31513279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 139 - 205
Target Start/End: Original strand, 33037816 - 33037881
Alignment:
Q  139 ccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    ||||||||| ||||||| | ||| ||||||||||||||||||||||||||| | |||| ||||||||    
T  33037816 ccctttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 33037881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 201
Target Start/End: Complemental strand, 4812559 - 4812511
Alignment:
Q  153 ttcattatagtggattggagagctgctctctcccccatagtaggtcata 201  Q
    ||||||||||||||| ||||||||||||||||||| | | |||||||||    
T  4812559 ttcattatagtggatcggagagctgctctctccccaagactaggtcata 4812511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 205
Target Start/End: Complemental strand, 6311381 - 6311319
Alignment:
Q  142 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    |||||| ||||||| | ||| ||||||||||||||||||||||||||| | |||| ||||||||    
T  6311381 tttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 6311319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 205
Target Start/End: Original strand, 7289927 - 7289989
Alignment:
Q  142 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    |||||| ||||||| | ||| ||||||||||||||||||||||||||| | |||| ||||||||    
T  7289927 tttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 7289989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 205
Target Start/End: Original strand, 25328279 - 25328341
Alignment:
Q  142 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    |||||| ||||||| | ||| ||||||||||||||||||||||||||| | |||| ||||||||    
T  25328279 tttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 25328341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 213
Target Start/End: Complemental strand, 28251632 - 28251577
Alignment:
Q  158 tatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    |||||||||| |||| |||||||||||||||||| |||||||  ||||||| ||||    
T  28251632 tatagtggatcggagggctgctctctcccccatactaggtcaatttggaccgaact 28251577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 153 - 200
Target Start/End: Original strand, 28328018 - 28328065
Alignment:
Q  153 ttcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    ||||||||||||||  ||||||||||||||||||||| | ||||||||    
T  28328018 ttcattatagtggaacggagagctgctctctcccccagactaggtcat 28328065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 213
Target Start/End: Original strand, 44721113 - 44721168
Alignment:
Q  158 tatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||||||||||||||||||||||| || | |||||||  ||||||| ||||    
T  44721113 tatagtggattggagagctgctctctcccgcagactaggtcaatttggaccgaact 44721168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 187
Target Start/End: Complemental strand, 11772063 - 11771981
Alignment:
Q  105 ttctttgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgctctctcccc 187  Q
    |||||||||| ||| |||  ||||||||| | ||| |||||||||||| | || ||||||||||||| || || |||||||||    
T  11772063 ttctttgtgaacttgtaaactaatttcttttaacctctttgtatcactcttatcatagtggattggaaagttgatctctcccc 11771981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 205
Target Start/End: Original strand, 39784843 - 39784885
Alignment:
Q  163 tggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    ||||||||||||||||||||||||||| | |||| ||||||||    
T  39784843 tggattggagagctgctctctcccccagattaggccatattgg 39784885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 199
Target Start/End: Original strand, 18810977 - 18811018
Alignment:
Q  158 tatagtggattggagagctgctctctcccccatagtaggtca 199  Q
    ||||||||||||||| |||||||||||||||| | |||||||    
T  18810977 tatagtggattggagggctgctctctcccccagattaggtca 18811018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 219
Target Start/End: Original strand, 32339579 - 32339640
Alignment:
Q  158 tatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggtta 219  Q
    |||||||||| |||| |||||||||||||||| | |||||||  ||||||| |||| |||||    
T  32339579 tatagtggatcggagggctgctctctcccccagactaggtcaatttggaccgaactgggtta 32339640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Complemental strand, 19491741 - 19491709
Alignment:
Q  181 tctcccccatagtaggtcatattggaccaaact 213  Q
    |||||||||||||||||||||||||||| ||||    
T  19491741 tctcccccatagtaggtcatattggaccgaact 19491709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 154
Target Start/End: Original strand, 30291620 - 30291695
Alignment:
Q  81 aaaatgggtagaagttaagtcttattctttgtgagct--tttaaggtaatttcttgttacccctttgtatcacttt 154  Q
    ||||||||||||| ||| || || |||||||||||||  || ||| ||||||||||| || | |||||||||||||    
T  30291620 aaaatgggtagaaattaggttttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatcacttt 30291695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 91; Significance: 3e-44; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 41 - 222
Target Start/End: Complemental strand, 22819615 - 22819433
Alignment:
Q  41 ttttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttaccc 140  Q
    |||||||||||||||||||||| |||||||| |||||| |||||||| ||||| ||| |||||||||||||||||||   ||| ||||||||||| || |    
T  22819615 ttttttctcttaggattcattgagagtgtgggtgacttgaaaaatggttagaaattatgtcttattctttgtgagctaaaaagctaatttcttgtaactc 22819516  T
Q  141 ctttgtatcactttcattatagtggattggagagctgctctctc-ccccatagtaggtcatattggaccaaacttggttacca 222  Q
     ||||||||||||||||  | ||||||||||| ||| ||||||| ||||| ||||||||||||||||||||| | ||||||||    
T  22819515 atttgtatcactttcatcttggtggattggagggctactctctccccccagagtaggtcatattggaccaaattgggttacca 22819433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 43 - 236
Target Start/End: Original strand, 47703848 - 47704042
Alignment:
Q  43 ttttctcttaggattcat--tgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacc 139  Q
    ||||||||||||||||||  |||||| |||| ||||  | ||||||||||||| ||| ||||| ||||| ||| ||||| |||| ||||||||||| |      
T  47703848 ttttctcttaggattcatattgtgagagtgggtgac--acaaaatgggtagaaattaggtcttgttcttgtgtaagcttgtaagctaatttcttgtaatt 47703945  T
Q  140 cctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgttt 236  Q
    | |||||| ||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||| |||| ||| | || |||||| ||||||    
T  47703946 cttttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttggtgtgttt 47704042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 43 - 206
Target Start/End: Original strand, 32736909 - 32737072
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccct 142  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||||| ||| |  || |||||| ||| |||||||| |||||| |||| ||| ||    
T  32736909 ttttctcttaggattcattgtgagtgtcgatgacttgaaaaatgggtagaaattagggtttgttctttatgaacttttaagctaattttttgtaacctct 32737008  T
Q  143 ttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgga 206  Q
    ||||||||| ||||| ||||| |||  ||||| | ||||||| |||| |||||||||| |||||    
T  32737009 ttgtatcaccttcatcatagttgatcagagagtttctctctctcccagagtaggtcattttgga 32737072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 43 - 239
Target Start/End: Complemental strand, 13598584 - 13598386
Alignment:
Q  43 ttttctcttaggattcat---tgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttac 138  Q
    ||||||||||||||||||   || |||||||| ||||  | |||||| |||||| ||||||||| ||||| ||| ||||| |||| |||||||||||  |    
T  13598584 ttttctcttaggattcatcattgagagtgtgggtgac--acaaaatgagtagaaattaagtcttgttcttgtgtaagcttataagctaatttcttgtatc 13598487  T
Q  139 ccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgt 238  Q
     | |||||| ||||||||| ||||||||||| || |||||||||||||||| | |||||||||||||||| |||| ||| | || |||||| ||||||||    
T  13598486 tcttttgtaacactttcatcatagtggattgaagggctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgt 13598387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 81 - 239
Target Start/End: Original strand, 16124466 - 16124625
Alignment:
Q  81 aaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgct 179  Q
    ||||||||||||| ||| ||||| ||||| ||| ||||| |||| ||||||||||| || | |||||| ||||||||| |||||||||||||| ||||||    
T  16124466 aaaatgggtagaaattaggtcttgttcttatgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgct 16124565  T
Q  180 ctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgtt 239  Q
    |||||||||| | |||||||||||||||| ||||  || | || |||||| |||||||||    
T  16124566 ctctcccccagattaggtcatattggaccgaactgagtcaacaatcttggtgtgtttgtt 16124625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 43 - 239
Target Start/End: Complemental strand, 29651997 - 29651799
Alignment:
Q  43 ttttctcttaggattcattgt---gagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttac 138  Q
    ||||||||||||||||||| |   |||||||| ||||  | ||||||||||||| ||| ||||| ||||| ||| ||||| |||| ||||||||||| |     
T  29651997 ttttctcttaggattcattattgagagtgtgggtgac--acaaaatgggtagaaattaggtcttgttcttgtgtaagcttataagttaatttcttgtaat 29651900  T
Q  139 ccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgt 238  Q
     | |||||| ||||||||| |||||||||||||| |||||||||||||||| | |||||||||||||||| |||| ||| |  | |||||| ||||||||    
T  29651899 tcttttgtaacactttcatcatagtggattggagtgctgctctctcccccagattaggtcatattggaccgaactgggtcaaaaatcttggtgtgtttgt 29651800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 80 - 222
Target Start/End: Original strand, 9023789 - 9023931
Alignment:
Q  80 aaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgct 179  Q
    |||| ||||||||| ||| ||||||||||||||||||||||| | |||||| ||||  ||| ||||||||||||||||  ||||||||||||||||| ||    
T  9023789 aaaagtgggtagaaattaggtcttattctttgtgagcttttatgctaatttattgtatcccatttgtatcactttcatcttagtggattggagagctact 9023888  T
Q  180 ctctcccccatagtaggtcatattggaccaaacttggttacca 222  Q
     | | ||||||| |||||||||||||| | |||| ||||||||    
T  9023889 atattccccataataggtcatattggagcgaactaggttacca 9023931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 43 - 219
Target Start/End: Original strand, 17345432 - 17345607
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccct 142  Q
    |||||||||| ||||||||  |||||||| ||||||||||||||||||||| ||| || || ||||||||| ||| ||| | |||||||||||  | | |    
T  17345432 ttttctcttaagattcattaagagtgtgggtgacttaaaaaatgggtagaaattaggttttgttctttgtgggctcttatgctaatttcttgtagcacat 17345531  T
Q  143 ttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggtta 219  Q
    ||||| ||| |||||  ||||||||||||||||| |||| | ||||| ||||||||||||| |||| |||| |||||    
T  17345532 ttgtaccacgttcatcttagtggattggagagctcctct-ttccccagagtaggtcatattagaccgaactgggtta 17345607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 81 - 213
Target Start/End: Complemental strand, 19073075 - 19072942
Alignment:
Q  81 aaaatgggtagaagttaagtcttattcttt-gtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgct 179  Q
    ||||||||||||| ||| || || |||||| || ||||| |||| ||||||||||| || | |||||| |||||||||  ||||||||||||||||||||    
T  19073075 aaaatgggtagaaattaggtattgttcttttgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcttagtggattggagagctgct 19072976  T
Q  180 ctctcccccatagtaggtcatattggaccaaact 213  Q
    |||||||||| | |||||||||||||||| ||||    
T  19072975 ctctcccccagattaggtcatattggaccgaact 19072942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 81 - 213
Target Start/End: Complemental strand, 19120965 - 19120832
Alignment:
Q  81 aaaatgggtagaagttaagtcttattcttt-gtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgct 179  Q
    ||||||||||||| ||| || || |||||| || ||||| |||| ||||||||||| || | |||||| |||||||||  ||||||||||||||||||||    
T  19120965 aaaatgggtagaaattaggtattgttcttttgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcttagtggattggagagctgct 19120866  T
Q  180 ctctcccccatagtaggtcatattggaccaaact 213  Q
    |||||||||| | |||||||||||||||| ||||    
T  19120865 ctctcccccagattaggtcatattggaccgaact 19120832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 81 - 239
Target Start/End: Complemental strand, 9476408 - 9476249
Alignment:
Q  81 aaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgct 179  Q
    ||||||| ||||| ||| ||||| ||||| ||| ||||| |||| ||||||||| | || | ||||||  |||||||| |||||||||||||||||||||    
T  9476408 aaaatggatagaaattaggtcttgttcttgtgtaagcttgtaagctaatttcttataactcttttgtaatactttcatcatagtggattggagagctgct 9476309  T
Q  180 ctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgtt 239  Q
    |||||||| | | |||||||||||||||| |||| ||| | || |||||| |||||||||    
T  9476308 ctctcccctagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgtt 9476249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 43 - 213
Target Start/End: Original strand, 35109450 - 35109619
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccct 142  Q
    ||||||| ||||||||||||||||||||  |||||| |||| ||||||||| |||||  || ||||||||||||||||||| ||||||||||| |||  |    
T  35109450 ttttctcgtaggattcattgtgagtgtgtgtgacttgaaaattgggtagaaattaaggtttgttctttgtgagcttttaagctaatttcttgtaacctat 35109549  T
Q  143 ttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    |||||||  | | || |||||||||  |||||||  ||||| || || | |||||||| ||||||||||||    
T  35109550 ttgtatctatcttatcatagtggatcagagagcttgtctct-cctcagattaggtcattttggaccaaact 35109619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 120 - 239
Target Start/End: Original strand, 27104362 - 27104481
Alignment:
Q  120 taaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggtta 219  Q
    |||| ||||||||||| || | |||||| ||||||||| ||||||||||||||||||||||||||||||| | ||||| |||||||||| ||||  || |    
T  27104362 taagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggttatattggaccgaactgtgtca 27104461  T
Q  220 ccagtcttggagtgtttgtt 239  Q
     || |||||| |||||||||    
T  27104462 acaatcttggtgtgtttgtt 27104481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 43 - 239
Target Start/End: Complemental strand, 32889624 - 32889427
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaattt-cttgttaccc 140  Q
    |||||||||||||||||||| |||||||| |||  | |||||||||||||| ||| | ||| ||||| ||| |||||  ||| || ||| ||||| || |    
T  32889624 ttttctcttaggattcattgagagtgtgggtgatatgaaaaatgggtagaaattaggacttgttcttgtgtaagcttgcaagctatttttcttgtaactc 32889525  T
Q  141 ctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgtt 239  Q
     || ||| |||||||||  |||||||||||||||||||||| ||||||| | |||||||||||||||| |||| | | | || |||||| |||||||||    
T  32889524 att-gtaacactttcatcttagtggattggagagctgctctatcccccagactaggtcatattggaccgaactagatcaacaatcttggtgtgtttgtt 32889427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 139 - 204
Target Start/End: Original strand, 19358852 - 19358917
Alignment:
Q  139 ccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattg 204  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  19358852 ccctttgtaacactttcatcatagtggattggagagctgctctctcccccatattaggtcatattg 19358917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 139 - 204
Target Start/End: Original strand, 19361441 - 19361506
Alignment:
Q  139 ccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattg 204  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  19361441 ccctttgtaacactttcatcatagtggattggagagctgctctctcccccatattaggtcatattg 19361506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 139 - 204
Target Start/End: Original strand, 19380081 - 19380146
Alignment:
Q  139 ccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattg 204  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  19380081 ccctttgtaacactttcatcatagtggattggagagctgctctctcccccatattaggtcatattg 19380146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 47098738 - 47098933
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattcttt-gtgagcttttaaggtaatttcttgttacccc 141  Q
    |||| ||||||| ||||||| |||||||| |||  | |||| ||||||||| ||| | ||| |||||| || ||||| |||| ||||||||||| || |     
T  47098738 ttttttcttaggtttcattgagagtgtgggtgatgtgaaaa-tgggtagaaattaggacttgttcttttgtaagcttataagctaatttcttgtaactca 47098836  T
Q  142 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgtt 239  Q
    || ||| |||||||||  ||||||||||||| |||||||||||||||| | | |||||||||||||| |||| ||| | || |||||| |||||||||    
T  47098837 tt-gtaacactttcatcttagtggattggagggctgctctctcccccagattcggtcatattggaccgaactgggtcaacaatcttggtgtgtttgtt 47098933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 82 - 213
Target Start/End: Complemental strand, 3281853 - 3281722
Alignment:
Q  82 aaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgctc 180  Q
    |||||||||||| ||| ||||| ||||| ||| |||||  ||| || |||||||| || | |||||| ||||||||| || |||||||||||||||||||    
T  3281853 aaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagctattttcttgtaactc-tttgtaacactttcatcatcgtggattggagagctgctc 3281755  T
Q  181 tctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||| | |||||||||||||||| ||||    
T  3281754 tctcccccagattaggtcatattggaccgaact 3281722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 82 - 213
Target Start/End: Original strand, 26644849 - 26644980
Alignment:
Q  82 aaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgctc 180  Q
    |||||||||||| ||| ||||| ||||| ||| |||||  ||| || |||||||| || | |||||| ||||||||| ||| ||||||||||||||||||    
T  26644849 aaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagctattttcttgtaactc-tttgtaacactttcatcataatggattggagagctgctc 26644947  T
Q  181 tctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||| | |||||||||||||||| ||||    
T  26644948 tctcccccagattaggtcatattggaccgaact 26644980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 213
Target Start/End: Original strand, 13604634 - 13604706
Alignment:
Q  141 ctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||| || |||||| ||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||    
T  13604634 ctttgtaacattttcatcatagtggattggagagctgctctctcccccatattaggtcatattgaacctaact 13604706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 141 - 200
Target Start/End: Original strand, 21536580 - 21536639
Alignment:
Q  141 ctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  21536580 ctttgtaacactttcattatagtggattggagagctgctctctcccccagattaggtcat 21536639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 139 - 205
Target Start/End: Original strand, 24202778 - 24202844
Alignment:
Q  139 ccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||| | |||| ||||||||    
T  24202778 ccctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggccatattgg 24202844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 141 - 213
Target Start/End: Complemental strand, 37069856 - 37069784
Alignment:
Q  141 ctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||| ||||||||| ||||||||| |||||| |||||||||||||| | |||||||||||||||| ||||    
T  37069856 ctttgtaacactttcatcatagtggatcggagagatgctctctcccccagattaggtcatattggaccgaact 37069784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 142 - 208
Target Start/End: Complemental strand, 775757 - 775691
Alignment:
Q  142 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggacc 208  Q
    |||||| |||||||||  ||||||||||||||||| |||||||||||| | ||||||||||||||||    
T  775757 tttgtaacactttcatcttagtggattggagagctactctctcccccagattaggtcatattggacc 775691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 185
Target Start/End: Original strand, 918392 - 918535
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatg-acttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccc 141  Q
    |||||||||||||||||||||| || ||  || | || |||||||||||||| ||| |  || ||||||||||| || |||| ||||||||||| |   |    
T  918392 ttttctcttaggattcattgtgggtttgagtggaattgaaaaatgggtagaaattatggtttgttctttgtgagtttgtaagataatttcttgtaatatc 918491  T
Q  142 tttgtatcactttcattatagtggattggagagctgctctctcc 185  Q
    ||||||||||| | || ||||||| |||||||| | ||||||||    
T  918492 tttgtatcactcttatcatagtggtttggagagtttctctctcc 918535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 157
Target Start/End: Original strand, 40816729 - 40816841
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattc-tttgtgagcttttaaggtaatttcttgttacccc 141  Q
    |||||||||||||||||||| |||||||| ||||   | ||||| |||||| ||| ||||| ||| ||||| ||||| |||| ||||||||||| || |     
T  40816729 ttttctcttaggattcattgagagtgtgggtgac---acaaatgagtagaaattaggtcttgttcttttgtaagcttataagctaatttcttgtaactct 40816825  T
Q  142 tttgtatcactttcat 157  Q
    |||||| |||||||||    
T  40816826 tttgtaacactttcat 40816841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 47102752 - 47102950
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggta--gaagttaagtcttattcttt-gtgagcttttaaggtaatttcttgttacc 139  Q
    |||| ||||||||||||||| |||||||  |||  | |||||||||||  ||| ||| | ||| |||||| ||  |||| |||| ||||||||||| ||     
T  47102752 ttttttcttaggattcattgagagtgtgagtgatatgaaaaatgggtatagaaattaggacttgttcttttgtatgcttataagttaatttcttgtaact 47102851  T
Q  140 cctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgtt 239  Q
    | || ||| || ||||||  ||||||||||||  |||||||||||||| | | |||||||||||||||| |||| ||| | || | |||| |||||||||    
T  47102852 catt-gtaacattttcatcttagtggattggatggctgctctctcccctagattaggtcatattggaccgaactgggtcaacaattttggtgtgtttgtt 47102950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 213
Target Start/End: Complemental strand, 9459484 - 9459429
Alignment:
Q  158 tatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||||||||| |||||||||||||||| | ||||||| |||||||| ||||    
T  9459484 tatagtggattggagggctgctctctcccccagactaggtcagattggaccgaact 9459429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 213
Target Start/End: Complemental strand, 9463311 - 9463256
Alignment:
Q  158 tatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||||||||| |||||||||||||||| | ||||||| |||||||| ||||    
T  9463311 tatagtggattggagggctgctctctcccccagactaggtcagattggaccgaact 9463256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 89
Target Start/End: Original strand, 11031386 - 11031433
Alignment:
Q  42 tttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggt 89  Q
    ||||||||||||||| ||||||||||||| ||||||| ||||||||||    
T  11031386 tttttctcttaggatacattgtgagtgtgaatgacttgaaaaatgggt 11031433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 167
Target Start/End: Original strand, 11032270 - 11032357
Alignment:
Q  80 aaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggat 167  Q
    |||||||||||||| ||| || || ||||||||||| ||||||  ||||||||||| ||| |||| ||||||| | || |||||||||    
T  11032270 aaaaatgggtagaaattatgttttgttctttgtgagtttttaatctaatttcttgtaacctctttatatcactattatcatagtggat 11032357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 213
Target Start/End: Original strand, 16226381 - 16226436
Alignment:
Q  158 tatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||||||||| |||||||||||||||| | ||||||| |||||||| ||||    
T  16226381 tatagtggattggagggctgctctctcccccagactaggtcagattggaccgaact 16226436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 213
Target Start/End: Original strand, 16231777 - 16231832
Alignment:
Q  158 tatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||||||||| |||||||||||||||| | ||||||| |||||||| ||||    
T  16231777 tatagtggattggagggctgctctctcccccagactaggtcagattggaccgaact 16231832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 173
Target Start/End: Original strand, 48382457 - 48382524
Alignment:
Q  106 tctttgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggaga 173  Q
    ||||||||| ||| |||| ||||||||||| |||  |||||||||||||||| ||| |||||||||||    
T  48382457 tctttgtgaacttgtaagttaatttcttgtaacctatttgtatcactttcatcatattggattggaga 48382524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 154 - 200
Target Start/End: Complemental strand, 9314713 - 9314667
Alignment:
Q  154 tcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    |||||||||||||  ||| ||||||||||||||||||||||||||||    
T  9314713 tcattatagtggaacggatagctgctctctcccccatagtaggtcat 9314667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 42 - 152
Target Start/End: Complemental strand, 10997141 - 10997031
Alignment:
Q  42 tttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccc 141  Q
    ||||||| ||||||||||  ||||||| || |||||| |||||||||||||| ||| |  || || ||||| | |||||||| ||||||||||| ||       
T  10997141 tttttcttttaggattcaacgtgagtgagggtgacttgaaaaatgggtagaaattagggtttgttatttgttatcttttaagttaatttcttgtaacata 10997042  T
Q  142 tttgtatcact 152  Q
    |||||||||||    
T  10997041 tttgtatcact 10997031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 154 - 200
Target Start/End: Complemental strand, 21353418 - 21353372
Alignment:
Q  154 tcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    |||||||||||||| ||||||||||||||||||||| | ||||||||    
T  21353418 tcattatagtggatcggagagctgctctctcccccagactaggtcat 21353372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 83
Target Start/End: Original strand, 9022817 - 9022857
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaa 83  Q
    ||||||||||||||||||||||||||||| |||||| ||||    
T  9022817 ttttctcttaggattcattgtgagtgtggttgacttgaaaa 9022857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 198
Target Start/End: Original strand, 9521827 - 9521871
Alignment:
Q  154 tcattatagtggattggagagctgctctctcccccatagtaggtc 198  Q
    |||||||||||||  ||||||||||||||||||||||| ||||||    
T  9521827 tcattatagtggaacggagagctgctctctcccccatactaggtc 9521871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 154 - 213
Target Start/End: Complemental strand, 9241156 - 9241097
Alignment:
Q  154 tcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    |||||||||||||  |||| |||||||||||||||||| |||||||  ||||||| ||||    
T  9241156 tcattatagtggaacggagggctgctctctcccccatactaggtcaatttggaccgaact 9241097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 205
Target Start/End: Original strand, 25445090 - 25445152
Alignment:
Q  142 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    |||||| ||||||| | ||| ||||||||||||||||||||||||||| | |||| ||||||||    
T  25445090 tttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 25445152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 205
Target Start/End: Complemental strand, 41390665 - 41390603
Alignment:
Q  142 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    |||||| ||||||| | ||| ||||||||||||||||||||||||||| | |||| ||||||||    
T  41390665 tttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 41390603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 205
Target Start/End: Complemental strand, 41398320 - 41398258
Alignment:
Q  142 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    |||||| ||||||| | ||| ||||||||||||||||||||||||||| | |||| ||||||||    
T  41398320 tttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 41398258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 213
Target Start/End: Original strand, 51752577 - 51752632
Alignment:
Q  158 tatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||||||||| |||||||||||||||| | |||||||  ||||||| ||||    
T  51752577 tatagtggattggagggctgctctctcccccagactaggtcaatttggaccgaact 51752632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 213
Target Start/End: Original strand, 51757744 - 51757799
Alignment:
Q  158 tatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||||||||| |||||||||||||||| | |||||||  ||||||| ||||    
T  51757744 tatagtggattggagggctgctctctcccccagactaggtcaatttggaccgaact 51757799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 200
Target Start/End: Complemental strand, 4144753 - 4144707
Alignment:
Q  154 tcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    |||||||||||||   |||||||||||||||||||| ||||||||||    
T  4144753 tcattatagtggaacagagagctgctctctcccccagagtaggtcat 4144707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 200
Target Start/End: Original strand, 9526578 - 9526624
Alignment:
Q  154 tcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    |||||||||||||  ||||||||||||||||||||| | ||||||||    
T  9526578 tcattatagtggaacggagagctgctctctcccccagactaggtcat 9526624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 23786054 - 23786108
Alignment:
Q  159 atagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||| |||| |||||||||||||||| | ||||||| |||||||| ||||    
T  23786054 atagtggatcggagggctgctctctcccccagactaggtcagattggaccgaact 23786108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 205
Target Start/End: Original strand, 24787374 - 24787439
Alignment:
Q  139 ccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    ||||||||| ||||||| | ||| |||||||||||||||||||| |||||| | |||| ||||||||    
T  24787374 ccctttgtaacactttc-tcatattggattggagagctgctctcccccccagattaggccatattgg 24787439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 205
Target Start/End: Complemental strand, 39445564 - 39445522
Alignment:
Q  163 tggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    ||||||||||||||||||||||||||| | |||| ||||||||    
T  39445564 tggattggagagctgctctctcccccagattaggccatattgg 39445522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 205
Target Start/End: Original strand, 44023894 - 44023936
Alignment:
Q  163 tggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    ||||||||||||||||||||||||||| | |||| ||||||||    
T  44023894 tggattggagagctgctctctcccccagattaggccatattgg 44023936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 135
Target Start/End: Complemental strand, 8281502 - 8281410
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgt 135  Q
    ||||||||| |||||||||||||||| || ||||||||| ||| | ||||| |||    || ||||||||||||  ||| | |||||||||||    
T  8281502 ttttctctttggattcattgtgagtgcgggtgacttaaataattgatagaaattagaatttgttctttgtgagcgattatgttaatttcttgt 8281410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 41361040 - 41361072
Alignment:
Q  181 tctcccccatagtaggtcatattggaccaaact 213  Q
    |||||||||||||||||||||||||||| ||||    
T  41361040 tctcccccatagtaggtcatattggaccgaact 41361072  T

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Target: chr7 (Bit Score: 89; Significance: 5e-43; HSPs: 63)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 80 - 240
Target Start/End: Original strand, 28617175 - 28617335
Alignment:
Q  80 aaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgct 179  Q
    |||||| ||||||| ||| || || ||||||||||||||||||| ||||||||||| ||||| |||||||||||||||  ||||||||||||||||||||    
T  28617175 aaaaataggtagaaattaggttttgttctttgtgagcttttaagctaatttcttgtaaccccattgtatcactttcatcttagtggattggagagctgct 28617274  T
Q  180 ctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgttt 240  Q
    |||||||||| |||||||||||||||||| |||| ||| | || | |||| ||||||||||    
T  28617275 ctctcccccagagtaggtcatattggaccgaactgggtaaacaatattggtgtgtttgttt 28617335  T

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Target: chr7; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 43 - 213
Target Start/End: Original strand, 5817183 - 5817352
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccct 142  Q
    |||| ||||||||||||||| |||||||  |||||| |||||||| ||||| ||| || || ||||||||||||| ||| |  |||||||||| ||||||    
T  5817183 ttttttcttaggattcattgagagtgtgagtgacttgaaaaatggatagaaattaggttttgttctttgtgagctcttatgcaaatttcttgtaacccct 5817282  T
Q  143 ttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    |||||||||||||||  |||||||||||||||||||||||| ||||| |||||||||||||||||| ||||    
T  5817283 ttgtatcactttcatattagtggattggagagctgctctct-ccccagagtaggtcatattggaccgaact 5817352  T

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Target: chr7; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 43 - 240
Target Start/End: Complemental strand, 3047438 - 3047242
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccct 142  Q
    |||| ||||| ||||||||| |||||||| ||||||||||| ||||||||| ||| ||||| ||||||||||||||||||| | ||||||||| || | |    
T  3047438 ttttatcttaagattcattgagagtgtgggtgacttaaaaa-tgggtagaaattaggtcttgttctttgtgagcttttaagttgatttcttgtaactcat 3047340  T
Q  143 ttgtatcactttcattatagtggattggagagctgctctctc-ccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgttt 240  Q
    ||||| |||||||||  |||||||||||| | | |||||||| ||||| || ||||||||||||||| |||| |||||| | |||||| ||||||||||    
T  3047339 ttgtaccactttcatattagtggattggataacggctctctccccccagagcaggtcatattggaccgaactgggttacga-tcttggtgtgtttgttt 3047242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 43 - 205
Target Start/End: Original strand, 2647610 - 2647771
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccc 141  Q
    |||||||||||||||||||| |||||||| ||||  | ||||||||||||| ||| ||||| ||||| ||| ||||| |||| ||||||||||| || |     
T  2647610 ttttctcttaggattcattgagagtgtgggtgac--acaaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactct 2647707  T
Q  142 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    |||||| ||||||||| |||||||||||||| |||||||||||||||| | |||||||||||||    
T  2647708 tttgtaacactttcatcatagtggattggagggctgctctctcccccagaataggtcatattgg 2647771  T

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Target: chr7; HSP #5
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 43 - 239
Target Start/End: Complemental strand, 29159989 - 29159791
Alignment:
Q  43 ttttctcttaggattcat--tgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacc 139  Q
    ||||||||||||||||||  |||||| |||| ||||  ||||| ||||||||| ||| ||||| ||||| ||| ||||| |||| ||||||||||| ||     
T  29159989 ttttctcttaggattcatattgtgagagtgggtgacacaaaaa-tgggtagaaattaggtcttgttcttgtgtaagcttgtaagctaatttcttgtaact 29159891  T
Q  140 cctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgtt 239  Q
    | |||||| ||||||||| ||||||||||||||||||||||||||||| | | |||||||||||||||| |||| ||| | || |||||| |||||||||    
T  29159890 cttttgtaacactttcatcatagtggattggagagctgctctctcccctagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgtt 29159791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 81 - 239
Target Start/End: Original strand, 46516260 - 46516419
Alignment:
Q  81 aaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgct 179  Q
    ||||||||||||| ||| ||||| ||||| ||| |||||||||| ||||||||||| || | |||||| ||||||||| |||||||||||||| ||||||    
T  46516260 aaaatgggtagaaattatgtcttgttcttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgct 46516359  T
Q  180 ctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgtt 239  Q
    |||||||| | | |||||||||||||||| |||| ||| | || |||||| |||||||||    
T  46516360 ctctcccctagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgtt 46516419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 43 - 239
Target Start/End: Complemental strand, 20284273 - 20284077
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattcttt-gtgagcttttaaggtaatttcttgttacccc 141  Q
    |||||||||||||||||||| |||||||| |||  | ||||| |||||||| ||| | ||| |||||| || ||||| |||| ||||||||||| || |     
T  20284273 ttttctcttaggattcattgagagtgtgggtgatatgaaaaaagggtagaaattaggacttgttcttttgtaagcttataagctaatttcttgtaacgca 20284174  T
Q  142 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgtt 239  Q
    || ||| |||||||||  ||||||||||||| |||||||||||||||| | |||||||||||||||| |||| ||| | || |||||| |||||||||    
T  20284173 tt-gtaacactttcatcttagtggattggagggctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgtt 20284077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 43 - 239
Target Start/End: Complemental strand, 49091847 - 49091649
Alignment:
Q  43 ttttctcttaggattcattgtg---agtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttac 138  Q
    ||||||||||||||||||| ||   ||||||| ||||  | | ||||||||||| ||| ||||| ||||| ||| ||||| |||||||||||||||| ||    
T  49091847 ttttctcttaggattcattatggagagtgtgggtgac--acagaatgggtagaaattaggtcttgttcttgtgtaagcttataaggtaatttcttgtaac 49091750  T
Q  139 ccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgt 238  Q
     | |||||| ||||||||| |||||||||||||||| |||||||| ||||| | ||||||||||||||| ||||| ||| | || |||||| | ||||||    
T  49091749 tcttttgtaacactttcatcatagtggattggagagttgctctcttccccagattaggtcatattggactaaactgggtcaacaatcttggtgcgtttgt 49091650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 43 - 239
Target Start/End: Complemental strand, 56133 - 55936
Alignment:
Q  43 ttttctcttaggattcattgt---gagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttac 138  Q
    ||||||||||||||||||| |   |||||||| ||||  | ||||||||||||| ||| ||||| ||||| ||| ||||| |||| ||||||||||| ||    
T  56133 ttttctcttaggattcattattgagagtgtgggtgac--acaaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaac 56036  T
Q  139 ccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgt 238  Q
     | |||||| ||||||||| |||||||||||||| |||||||||| ||||| | |||||||||||||||| |||| ||| |  | |||||| ||||||||    
T  56035 tcttttgtaacactttcatcatagtggattggagggctgctctct-ccccagattaggtcatattggaccgaactgggtcaataatcttggtgtgtttgt 55937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 43 - 239
Target Start/End: Complemental strand, 2580574 - 2580378
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccc 141  Q
    |||||||||||||||||||| |||||||| |||  | ||||||||||||||  || | ||| ||||| ||| |||||  ||| || |||||||| || |     
T  2580574 ttttctcttaggattcattgagagtgtgggtgatatgaaaaatgggtagaaactaggacttgttcttgtgtaagcttgcaagctattttcttgtaactca 2580475  T
Q  142 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgtt 239  Q
    || ||| |||||||||  |||||||||||||||||||||||||||||| | |||||||||||||||| || | ||| | || |||||| |||||||||    
T  2580474 tt-gtaacactttcatcttagtggattggagagctgctctctcccccagactaggtcatattggaccgaattgggtcaacaatcttggtgtgtttgtt 2580378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 33332363 - 33332559
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattcttt-gtgagcttttaaggtaatttcttgttacccc 141  Q
    ||||||||||||| |||||| |||||||  ||| |  ||||||| |||||| ||| ||||| |||||| || ||||| |||| ||||||||||| || |     
T  33332363 ttttctcttaggaatcattgagagtgtgcgtga-tacaaaaatgagtagaaattaggtcttgttcttttgtaagcttataagctaatttcttgtaactct 33332461  T
Q  142 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgtt 239  Q
    |||||| |||||||||  ||||||||||||| |||||||||||||||| | ||||||||||| || | |||| ||| | || |||||| |||||||||    
T  33332462 tttgtaacactttcatcttagtggattggagggctgctctctcccccagattaggtcatattagatcgaactgggtcaacaatcttggtgtgtttgtt 33332559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 4796581 - 4796776
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccc 141  Q
    |||||||||||||||||||| || ||| | ||||  | |||||||||| || | | ||||| ||||| ||| ||||| |||| ||||||||||| || |     
T  4796581 ttttctcttaggattcattgagaatgtaggtgac--acaaaatgggtataaatgaggtcttgttcttgtgtaagcttataagctaatttcttgtaactct 4796678  T
Q  142 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgtt 239  Q
    |||||| || |||||| |||||||||| ||| |||||| ||||||||| | |||||||| ||||||| |||| ||||| || |||||| |||||||||    
T  4796679 tttgtaacaatttcatcatagtggatttgagggctgctttctcccccagattaggtcattttggaccgaactgggttaacaatcttggtgtgtttgtt 4796776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 9189920 - 9190117
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaattt-cttgttaccc 140  Q
    |||||||||||||||||||  |||||||| |||  | |||||||||||||| ||| | ||| ||||| ||| |||||  ||| || ||| ||||| || |    
T  9189920 ttttctcttaggattcattaagagtgtgggtgatatgaaaaatgggtagaaattaggacttgttcttgtgtaagcttgcaagctatttttcttgtaactc 9190019  T
Q  141 ctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgtt 239  Q
     || ||| |||||||||  |||||||||||||||||||||||||||||| | |||||||||||||||| |||| ||| | || |||||| |||||||||    
T  9190020 att-gtaacactttcatcttagtggattggagagctgctctctcccccagactaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgtt 9190117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 81 - 239
Target Start/End: Complemental strand, 35960963 - 35960804
Alignment:
Q  81 aaaatgggtagaagttaagtcttattcttt-gtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgct 179  Q
    ||||||||||||| ||| || || |||||| || ||||| |||| ||||||||| | || | |||||| ||||||||| ||||||| |||||| ||||||    
T  35960963 aaaatgggtagaaattaggtattgttcttttgtaagcttataagctaatttcttctaactcatttgtaacactttcatcatagtggtttggagggctgct 35960864  T
Q  180 ctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgtt 239  Q
    |||||||||| | |||||||||||| ||| |||| ||| | || |||||| |||||||||    
T  35960863 ctctcccccagattaggtcatattgaaccgaactcggtcaacaatcttggtgtgtttgtt 35960804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 142 - 213
Target Start/End: Complemental strand, 21983369 - 21983298
Alignment:
Q  142 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||| ||||    
T  21983369 tttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaact 21983298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 139 - 205
Target Start/End: Complemental strand, 21639896 - 21639830
Alignment:
Q  139 ccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| | |||| ||||||||    
T  21639896 ccctttgtaacactttcattatagtggattggagagctgctctctcccccagattaggccatattgg 21639830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 82 - 213
Target Start/End: Original strand, 44848636 - 44848767
Alignment:
Q  82 aaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgctc 180  Q
    |||||||||||| ||| ||||||||||| ||| |||||  ||| |  ||||||| || | ||||||| ||||||||| ||||||||||||||||||||||    
T  44848636 aaatgggtagaaattaggtcttattcttgtgtaagcttgcaagcttttttcttg-taactctttgtaacactttcatcatagtggattggagagctgctc 44848734  T
Q  181 tctcccccatagtaggtcatattggaccaaact 213  Q
    |||||||||   |||||||||||| ||| ||||    
T  44848735 tctcccccaggttaggtcatattgaaccgaact 44848767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 43 - 208
Target Start/End: Original strand, 23402926 - 23403091
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattc-tttgtgagcttttaaggtaatttcttgttacccc 141  Q
    |||||||||||||||||||| |||||||  |||  | |||||||||||||| ||| | ||| ||| ||||| ||||| |||| |||||||||| || | |    
T  23402926 ttttctcttaggattcattgagagtgtgagtgatgtgaaaaatgggtagaaattaggacttgttcttttgtaagcttataagctaatttcttg-taactc 23403024  T
Q  142 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggacc 208  Q
     ||||| |||||||||  |||| |||||||| ||||||| ||||| || | ||||||||||| ||||    
T  23403025 attgtaacactttcatcttagtagattggagggctgctcactccctcagattaggtcatattagacc 23403091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 205
Target Start/End: Complemental strand, 2058053 - 2057987
Alignment:
Q  139 ccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    ||||||||| ||||||||| ||| ||||||||||||||||||||||||||| | |||| ||||||||    
T  2058053 ccctttgtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattgg 2057987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 205
Target Start/End: Complemental strand, 18408851 - 18408785
Alignment:
Q  139 ccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    ||||||||| ||||||||| ||| ||||||||||||||||||||||||||| | |||| ||||||||    
T  18408851 ccctttgtaacactttcatcatactggattggagagctgctctctcccccagattaggccatattgg 18408785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 213
Target Start/End: Complemental strand, 47263754 - 47263692
Alignment:
Q  149 cactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||| ||||||||||||||||||||  ||||||||||| |||||||||||||||| ||||    
T  47263754 cactttcatcatagtggattggagagctgc--tctcccccatattaggtcatattggaccgaact 47263692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 187
Target Start/End: Complemental strand, 18413727 - 18413679
Alignment:
Q  139 ccctttgtatcactttcattatagtggattggagagctgctctctcccc 187  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  18413727 ccctttgtaacactttcatcatagtggattggagagctgctctctcccc 18413679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 213
Target Start/End: Complemental strand, 7351717 - 7351662
Alignment:
Q  158 tatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||||||||| |||||||||||||||||| ||||||| |||||||| ||||    
T  7351717 tatagtggattggagggctgctctctcccccatactaggtcagattggaccgaact 7351662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 139 - 205
Target Start/End: Original strand, 1533453 - 1533519
Alignment:
Q  139 ccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    ||||||||| ||||||||| ||| |||||||||||| |||||||||||||| | |||| ||||||||    
T  1533453 ccctttgtaacactttcatcatattggattggagagatgctctctcccccagattaggccatattgg 1533519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 143 - 213
Target Start/End: Original strand, 9185178 - 9185248
Alignment:
Q  143 ttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||| |||||||||  ||||||||||||||||| |||||||||||| | ||||| |||||||||| ||||    
T  9185178 ttgtaacactttcatcttagtggattggagagcttctctctcccccagactaggttatattggaccgaact 9185248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 154 - 213
Target Start/End: Original strand, 21369754 - 21369814
Alignment:
Q  154 tcattatagtggattggagagctgctctctcccccatagtaggtcat-attggaccaaact 213  Q
    |||||||||||||  ||||||||||||||||| |||||||||||||| |||||||| ||||    
T  21369754 tcattatagtggaacggagagctgctctctccgccatagtaggtcatcattggaccgaact 21369814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 200
Target Start/End: Complemental strand, 3320122 - 3320075
Alignment:
Q  153 ttcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    ||||||||||||||| ||||||||||||||||||||| | ||||||||    
T  3320122 ttcattatagtggatcggagagctgctctctcccccagactaggtcat 3320075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 200
Target Start/End: Complemental strand, 3324870 - 3324823
Alignment:
Q  153 ttcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    ||||||||||||||| ||||||||||||||||||||| | ||||||||    
T  3324870 ttcattatagtggatcggagagctgctctctcccccagactaggtcat 3324823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 200
Target Start/End: Original strand, 25405503 - 25405550
Alignment:
Q  153 ttcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    ||||||||||||||| ||||||||||||||||||||| | ||||||||    
T  25405503 ttcattatagtggatcggagagctgctctctcccccagactaggtcat 25405550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 213
Target Start/End: Complemental strand, 31155976 - 31155921
Alignment:
Q  158 tatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||||||||| |||||||||||||||| | ||||||| |||||||| ||||    
T  31155976 tatagtggattggagggctgctctctcccccagactaggtcagattggaccgaact 31155921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 154 - 200
Target Start/End: Original strand, 2121011 - 2121057
Alignment:
Q  154 tcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    |||||||||||||| ||||||||||||||||||||| | ||||||||    
T  2121011 tcattatagtggatcggagagctgctctctcccccagactaggtcat 2121057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 7349338 - 7349288
Alignment:
Q  158 tatagtggattggagagctgctctctcccccatagtaggtcatattggacc 208  Q
    ||||||||||||||| |||||||||||||||| | ||||||| ||||||||    
T  7349338 tatagtggattggagggctgctctctcccccagactaggtcagattggacc 7349288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 139 - 205
Target Start/End: Original strand, 20357557 - 20357622
Alignment:
Q  139 ccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    ||||||||| ||||||| | ||| ||||||||||||||||||||||||||| | |||| ||||||||    
T  20357557 ccctttgtaacactttc-tcatattggattggagagctgctctctcccccaaattaggccatattgg 20357622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 139 - 205
Target Start/End: Complemental strand, 21646094 - 21646028
Alignment:
Q  139 ccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    |||||| || ||||||||| ||||||||||||||||||||||||| ||| | | |||| ||||||||    
T  21646094 ccctttttaacactttcatcatagtggattggagagctgctctcttccctagattaggccatattgg 21646028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 213
Target Start/End: Complemental strand, 2479422 - 2479351
Alignment:
Q  141 ctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||| ||||||||| |||||||||| ||||||||||||| |||| | | |||||||||||| ||| ||||    
T  2479422 ctttgtaacactttcatcatagtggatttgagagctgctctc-cccctagattaggtcatattgaaccgaact 2479351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 217
Target Start/End: Complemental strand, 44010820 - 44010756
Alignment:
Q  154 tcattatagtggattggagagctgctctctcccccatagtaggtcat-attggaccaaacttggt 217  Q
    |||||||||||||  ||||||||||||||||||||| | |||||||| ||| |||| ||||||||    
T  44010820 tcattatagtggaacggagagctgctctctcccccagactaggtcatcattagaccgaacttggt 44010756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 213
Target Start/End: Complemental strand, 1046990 - 1046935
Alignment:
Q  158 tatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||||||||| |||||||||||||||| | |||||||  ||||||| ||||    
T  1046990 tatagtggattggagggctgctctctcccccacactaggtcaatttggaccgaact 1046935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 213
Target Start/End: Complemental strand, 1049361 - 1049306
Alignment:
Q  158 tatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||||||||| |||||||||||||||| | |||||||  ||||||| ||||    
T  1049361 tatagtggattggagggctgctctctcccccagactaggtcaatttggaccgaact 1049306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 213
Target Start/End: Original strand, 1850205 - 1850260
Alignment:
Q  158 tatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    |||||||||| |||| |||||||||||||||||| |||||||  ||||||| ||||    
T  1850205 tatagtggatcggagggctgctctctcccccatactaggtcaatttggaccgaact 1850260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 213
Target Start/End: Original strand, 3035948 - 3036003
Alignment:
Q  158 tatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||||||||| |||||||||||||||| | |||||||  ||||||| ||||    
T  3035948 tatagtggattggagggctgctctctcccccagactaggtcaatttggaccgaact 3036003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 205
Target Start/End: Complemental strand, 4866814 - 4866752
Alignment:
Q  142 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    |||||| ||||||| | ||| ||||||||||||||||||||||||||| | |||| ||||||||    
T  4866814 tttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 4866752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 154 - 208
Target Start/End: Original strand, 6046714 - 6046769
Alignment:
Q  154 tcattatagtggattggagagctgctctctcccccatagtaggtca-tattggacc 208  Q
    ||||||||||||| || ||||||||||||||||||| | ||||||| |||||||||    
T  6046714 tcattatagtggaatgaagagctgctctctcccccagactaggtcagtattggacc 6046769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 154 - 208
Target Start/End: Complemental strand, 6067268 - 6067213
Alignment:
Q  154 tcattatagtggattggagagctgctctctcccccatagtaggtca-tattggacc 208  Q
    ||||||||||| |  ||||||||||||||||||||||| ||||||| |||||||||    
T  6067268 tcattatagtgaaacggagagctgctctctcccccatactaggtcagtattggacc 6067213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 153 - 200
Target Start/End: Original strand, 7069890 - 7069937
Alignment:
Q  153 ttcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    ||||||||||||||| | ||||||||||||||||||| | ||||||||    
T  7069890 ttcattatagtggatcgaagagctgctctctcccccagactaggtcat 7069937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 153 - 200
Target Start/End: Original strand, 7074897 - 7074944
Alignment:
Q  153 ttcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    ||||||||||||||| |||||||||| |||||||||| | ||||||||    
T  7074897 ttcattatagtggatcggagagctgcactctcccccagactaggtcat 7074944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 205
Target Start/End: Complemental strand, 19992397 - 19992335
Alignment:
Q  142 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    |||||| ||||||||  ||| ||||||||||||||||||||||||||| | |||| ||||||||    
T  19992397 tttgtaacactttcac-atattggattggagagctgctctctcccccagattaggccatattgg 19992335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 213
Target Start/End: Original strand, 20297586 - 20297641
Alignment:
Q  158 tatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||||||||| |||||||||||||||| | |||||||  ||||||| ||||    
T  20297586 tatagtggattggagggctgctctctcccccagactaggtcaatttggaccgaact 20297641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 205
Target Start/End: Original strand, 24024327 - 24024389
Alignment:
Q  142 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    |||||| ||||||| | ||| ||||||||||||||||||||||||||| | |||| ||||||||    
T  24024327 tttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 24024389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 43 - 118
Target Start/End: Original strand, 45685658 - 45685733
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagctt 118  Q
    |||||||||||||||||||| || | ||  ||||||||||||||| ||||| |||||  || |||||||| |||||    
T  45685658 ttttctcttaggattcattgcgactttgagtgacttaaaaaatggatagaaattaaggtttgttctttgtcagctt 45685733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 2935493 - 2935547
Alignment:
Q  159 atagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||| |||| |||||||||||||||| | ||||||| |||||||| ||||    
T  2935493 atagtggatcggagggctgctctctcccccagactaggtcagattggaccgaact 2935547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 200
Target Start/End: Complemental strand, 8378574 - 8378528
Alignment:
Q  154 tcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    |||||||||||||| |||||| |||||||||||||| | ||||||||    
T  8378574 tcattatagtggatcggagagttgctctctcccccagactaggtcat 8378528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 213
Target Start/End: Complemental strand, 9027258 - 9027204
Alignment:
Q  159 atagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||| |||| |||||||||||||||| | ||||||| |||||||| ||||    
T  9027258 atagtggataggagggctgctctctcccccagactaggtcagattggaccgaact 9027204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 239
Target Start/End: Complemental strand, 21988991 - 21988896
Alignment:
Q  142 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgtt 239  Q
    |||||| ||||||||| | |||||||||||||| ||  |||||| ||| | |||||||||||||||| |||| ||| | || ||| || |||||||||    
T  21988991 tttgtaacactttcatcaaagtggattggagagttg--ctctcctccagattaggtcatattggaccgaactgggtcaacaatctcggtgtgtttgtt 21988896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 22108291 - 22108345
Alignment:
Q  159 atagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||| |||| |||||||||||||||| | ||||||| |||||||| ||||    
T  22108291 atagtggatcggagggctgctctctcccccagactaggtcagattggaccgaact 22108345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 22137302 - 22137356
Alignment:
Q  159 atagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||| |||| |||||||||||||||| | ||||||| |||||||| ||||    
T  22137302 atagtggatcggagggctgctctctcccccagactaggtcagattggaccgaact 22137356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 200
Target Start/End: Original strand, 25351463 - 25351509
Alignment:
Q  154 tcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    |||||||||||||| ||||||||| ||||||||||| | ||||||||    
T  25351463 tcattatagtggatcggagagctgttctctcccccagactaggtcat 25351509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 200
Target Start/End: Original strand, 25410242 - 25410288
Alignment:
Q  154 tcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    |||||||||||||  ||||||||||||||||||||| | ||||||||    
T  25410242 tcattatagtggaacggagagctgctctctcccccagactaggtcat 25410288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 200
Target Start/End: Complemental strand, 34546950 - 34546904
Alignment:
Q  154 tcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    |||||||||||||  ||||||||||||||||||||| | ||||||||    
T  34546950 tcattatagtggaacggagagctgctctctcccccagactaggtcat 34546904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 40550051 - 40550105
Alignment:
Q  159 atagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||| |||| |||||||||||||||| | ||||||| |||||||| ||||    
T  40550051 atagtggatcggagggctgctctctcccccagactaggtcagattggaccgaact 40550105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 40552329 - 40552383
Alignment:
Q  159 atagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||| |||| |||||||||||||||| | ||||||| |||||||| ||||    
T  40552329 atagtggatcggagggctgctctctcccccagactaggtcagattggaccgaact 40552383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 135
Target Start/End: Original strand, 9235495 - 9235588
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattc-tttgtgagcttttaaggtaatttcttgt 135  Q
    |||||||||||||||| ||| ||||| || |||  | |||||||||||||| ||| | ||| ||| ||||| ||||| |||| |||||||||||    
T  9235495 ttttctcttaggattcgttgagagtgcgggtgatatgaaaaatgggtagaaattaggacttgttcttttgtaagcttataagctaatttcttgt 9235588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 217
Target Start/End: Complemental strand, 24817422 - 24817358
Alignment:
Q  154 tcattatagtggattggagagctgctctctcccccatagtaggtca-tattggaccaaacttggt 217  Q
    |||||||||||||  |||  |||||||||||||||||| ||||||| | ||||||| ||||||||    
T  24817422 tcattatagtggaacggatggctgctctctcccccatactaggtcagttttggaccgaacttggt 24817358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 213
Target Start/End: Original strand, 30247082 - 30247142
Alignment:
Q  154 tcattatagtggattggagagctgctctctcccccatagtaggtcat-attggaccaaact 213  Q
    |||||||||||||  ||||||||||| ||||||||| | |||||||| ||| |||||||||    
T  30247082 tcattatagtggaacggagagctgctatctcccccagactaggtcatcattagaccaaact 30247142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 83; Significance: 2e-39; HSPs: 78)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 18552787 - 18552982
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccc 141  Q
    |||||||||||||||||||| |||||||| ||||  | ||||||||||||| ||| ||||| ||||| ||| ||||| |||| ||||||||||| || |     
T  18552787 ttttctcttaggattcattgagagtgtgggtgac--acaaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactct 18552884  T
Q  142 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgtt 239  Q
    |||||| ||||||||| |||||||||||||| |||||||||||||||| | |||||||||||||||| |||| ||| | || |||||| || ||||||    
T  18552885 tttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttggtgtatttgtt 18552982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 64 - 201
Target Start/End: Original strand, 4386851 - 4386988
Alignment:
Q  64 gagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagt 163  Q
    |||||||| |||||| ||||||| |||||| ||| || || ||||||||||||||||||| ||||||||||| |||| ||||||||||||| ||  || |    
T  4386851 gagtgtgggtgacttgaaaaatgagtagaaattaggttttgttctttgtgagcttttaagctaatttcttgtaacccatttgtatcacttttatcttatt 4386950  T
Q  164 ggattggagagctgctctctcccccatagtaggtcata 201  Q
    |||||||||||||||||||||||||| |||||||||||    
T  4386951 ggattggagagctgctctctcccccagagtaggtcata 4386988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 43 - 213
Target Start/End: Original strand, 8370390 - 8370559
Alignment:
Q  43 ttttctcttaggattcat--tgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacc 139  Q
    ||||||||||||||||||  |||||| |||| ||||   | |||||||||||| ||| ||||| ||||| ||| |||||||||| ||||||||||| ||     
T  8370390 ttttctcttaggattcatattgtgagagtgggtgac---acaaatgggtagaaattatgtcttgttcttgtgtaagcttttaagctaatttcttgtaact 8370486  T
Q  140 cctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    | |||||| ||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||| ||||    
T  8370487 c-tttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaact 8370559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 43 - 213
Target Start/End: Complemental strand, 25795964 - 25795795
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattcttt-gtgagcttttaaggtaatttcttgttacccc 141  Q
    |||||||||||||||||||| |||||||| ||||  | ||||||||||||| ||| ||||| |||||| || ||||| |||| ||||||||||| || |     
T  25795964 ttttctcttaggattcattgagagtgtgggtgac--acaaaatgggtagaaattaggtcttgttcttttgtaagcttataagctaatttcttgtaactct 25795867  T
Q  142 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    || ||| |||||||||  |||| ||||||||||||||||||||||||| | |||||||||||||||| ||||    
T  25795866 ttcgtaacactttcatcttagtagattggagagctgctctctcccccagattaggtcatattggaccgaact 25795795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 43 - 213
Target Start/End: Complemental strand, 40844834 - 40844666
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccc 141  Q
    |||||||||||||||||||| |||||||| ||||  | ||||||||||||| ||| ||||| ||||| ||| ||||| |||| ||||||||||| || |     
T  40844834 ttttctcttaggattcattgagagtgtgggtgac--acaaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactct 40844737  T
Q  142 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    |||||| ||||||||| |||||||||| ||| |||||||||| ||||| | |||||||||||||||| ||||    
T  40844736 tttgtaacactttcatcatagtggatttgagggctgctctct-ccccagattaggtcatattggaccgaact 40844666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 81 - 239
Target Start/End: Original strand, 1736245 - 1736404
Alignment:
Q  81 aaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgct 179  Q
    ||||||||||||| ||| ||||| ||||| ||| ||||| |||| ||||||||||| || | |||||| ||||||||| |||||||||||||| ||||||    
T  1736245 aaaatgggtagaaattaggtcttgttcttgtgtaagcttataagttaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgct 1736344  T
Q  180 ctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgtt 239  Q
    |||||||||| | |||||||||||||||| |||| ||| | || | |||| |||||||||    
T  1736345 ctctcccccagattaggtcatattggaccgaactgggtcaacaatattggtgtgtttgtt 1736404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 43 - 239
Target Start/End: Complemental strand, 48438400 - 48438202
Alignment:
Q  43 ttttctcttaggattcattgt---gagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttac 138  Q
    ||||||||||||||||||| |   |||||||| ||||  | ||||||||||||| ||| ||||| ||||| ||| ||||| || | ||||||||||| ||    
T  48438400 ttttctcttaggattcattattgagagtgtgggtgac--acaaaatgggtagaaattaggtcttgttcttgtgtaagcttatatgctaatttcttgtaac 48438303  T
Q  139 ccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgt 238  Q
     | |||||| ||||||||| |||||||||||||| |||||||||||||||| | |||||||||||||||| |||| ||| |  | |||||| ||||||||    
T  48438302 tcttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactaggtcaataatcttggtgtgtttgt 48438203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 82 - 239
Target Start/End: Complemental strand, 21711368 - 21711211
Alignment:
Q  82 aaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgctc 180  Q
    |||||||||||| ||| |||||  |||| ||| |||||||||| ||||||||||| || | |||||| ||||||||| |||||||||| |||||||||||    
T  21711368 aaatgggtagaaattaggtcttgctcttgtgtaagcttttaagctaatttcttgtaactc-tttgtaacactttcatcatagtggatttgagagctgctc 21711270  T
Q  181 tctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgtt 239  Q
    ||||||||| | |||||||||||||||| |||| ||| | || |||||| |||||||||    
T  21711269 tctcccccagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgtt 21711211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 3715904 - 3716101
Alignment:
Q  43 ttttctcttaggattcat--tgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacc 139  Q
    ||||||||||||||||||  |||||  |||| ||||  | ||||||||||||| ||||||||| ||||| ||| || || |||| ||||||||||| ||     
T  3715904 ttttctcttaggattcatattgtgaaagtgggtgac--acaaaatgggtagaaattaagtcttgttcttgtgtaagtttgtaagctaatttcttgtaact 3716001  T
Q  140 cctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgtt 239  Q
    | |||||| ||||||||| ||||| |||||||||||||||||||| || | | |||||||||||||||| |||| ||| | || |||||| |||||||||    
T  3716002 cttttgtaacactttcatcatagtagattggagagctgctctctctcctagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgtt 3716101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 40592684 - 40592881
Alignment:
Q  43 ttttctcttaggattcat--tgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacc 139  Q
    ||||||||||||||||||  |||||| |||| ||||  | ||||||||||||| |||  | || ||||| ||| ||||| |||| ||||||||||| ||     
T  40592684 ttttctcttaggattcatattgtgagagtgggtgac--acaaaatgggtagaaattagattttgttcttgtgtaagcttgtaagctaatttcttgtaact 40592781  T
Q  140 cctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgtt 239  Q
    | |||||| ||||||||| ||||| |||||||||||| ||||||||| || | |||||||||||||||| |||| ||| | || |||||| |||||||||    
T  40592782 cttttgtaacactttcatcatagtcgattggagagcttctctctcccacagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgtt 40592881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 81 - 207
Target Start/End: Complemental strand, 36029240 - 36029113
Alignment:
Q  81 aaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgct 179  Q
    ||||||||||||| ||| ||||| ||||| ||| || || |||| ||||||||||| || | |||||| ||||||||| |||||||||||||||||||||    
T  36029240 aaaatgggtagaaattaggtcttgttcttgtgtaagtttgtaagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgct 36029141  T
Q  180 ctctcccccatagtaggtcatattggac 207  Q
     ||||||||| | |||||||||||||||    
T  36029140 ttctcccccagattaggtcatattggac 36029113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 141 - 239
Target Start/End: Original strand, 6794714 - 6794812
Alignment:
Q  141 ctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgtt 239  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| |||  ||| | || |||||| |||||||||    
T  6794714 ctttgtaacactttcatcatagtggattggagagctgctctctcccccatattaggtcatattggacctaaccgggtcaacaatcttggtgtgtttgtt 6794812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 24695068 - 24695263
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattcttt-gtgagcttttaaggtaatttcttgttacccc 141  Q
    |||||| ||||||||||||| |||||||| ||||  | ||||||||||||| ||| ||||| |||||| || || || |||| ||||||||||| || |     
T  24695068 ttttcttttaggattcattgagagtgtgggtgac--acaaaatgggtagaaattaggtcttgttcttttgtaagtttataagctaatttcttgtaactct 24695165  T
Q  142 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgtt 239  Q
    |||||| ||||||||| |||| ||||| ||| | |||||||||||  | | |||||||||||||||| |||| ||| | || |||||| |||||||||    
T  24695166 tttgtaacactttcatcatagcggattagagggttgctctctcccgtagattaggtcatattggaccgaactaggtcaacaatcttggtgtgtttgtt 24695263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 43 - 239
Target Start/End: Complemental strand, 26299171 - 26298976
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccc 141  Q
    ||||||||||||||| |||| || ||||| ||||  | ||||||||||||| ||| ||||| ||||| | | || || |||| ||||||||||| || |     
T  26299171 ttttctcttaggattaattgagattgtgggtgac--acaaaatgggtagaaattaggtcttgttcttgtctaagtttataagctaatttcttgtaactct 26299074  T
Q  142 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgtt 239  Q
    |||||| ||||||||| ||||| |||||||| |||||||||||||||| | || ||||||||| ||| |||| ||| | || |||||| |||||||||    
T  26299073 tttgtaacactttcatcatagtagattggagggctgctctctcccccagattatgtcatattgaaccgaactgggtcaacaatcttggtgtgtttgtt 26298976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 1417393 - 1417589
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattcttt-gtgagcttttaaggtaatttcttgttacccc 141  Q
    |||||||||||||||||||| |||||||| |||  | |||||||||||||| ||| | ||| |||||| || || || |||| ||||||||| | || |     
T  1417393 ttttctcttaggattcattgggagtgtgggtgatatgaaaaatgggtagaaattaggacttgttcttttgtaagtttataagctaatttcttataactca 1417492  T
Q  142 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgtt 239  Q
    || ||| ||||||| |  ||||||||||||| | |||||||||||||| | |||||||||||||||| |||| ||| | || |||||| |||||||||    
T  1417493 tt-gtaacactttcttcttagtggattggagggatgctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgtt 1417589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 43 - 213
Target Start/End: Original strand, 30709691 - 30709863
Alignment:
Q  43 ttttctcttaggattcattgt---gagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttac 138  Q
    ||||||||||||||||||| |   |||||||| ||||  | || |||||||||| ||| |||||  |||| ||| ||||| |||| ||||||||||| ||    
T  30709691 ttttctcttaggattcattattgagagtgtgggtgac--acaagatgggtagaaattaggtcttgctcttgtgtaagcttataagctaatttcttgtaac 30709788  T
Q  139 ccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
     | |||||| || |||||| |||||||||||||| |||||||||||||||| | |||||||||||||||| ||||    
T  30709789 tcttttgtaacaatttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaact 30709863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 43 - 185
Target Start/End: Complemental strand, 21353746 - 21353604
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccct 142  Q
    |||||||||| |||||||||| ||||||  || | | |||||||||||||| ||| ||  | ||||||||||||| ||  | ||||||||||| || | |    
T  21353746 ttttctcttaagattcattgtaagtgtgagtggcatgaaaaatgggtagaaattaggttgtgttctttgtgagctcttgtgctaatttcttgtaactcat 21353647  T
Q  143 ttgtatcactttcattatagtggattggagagctgctctctcc 185  Q
    |||||||||||||||  ||||||||||||||| ||||||||||    
T  21353646 ttgtatcactttcatcttagtggattggagaggtgctctctcc 21353604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 139 - 213
Target Start/End: Complemental strand, 32143409 - 32143335
Alignment:
Q  139 ccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||| ||||    
T  32143409 ccctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaact 32143335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 141 - 213
Target Start/End: Complemental strand, 16264436 - 16264364
Alignment:
Q  141 ctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||| ||||    
T  16264436 ctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaact 16264364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 141 - 213
Target Start/End: Original strand, 27974953 - 27975025
Alignment:
Q  141 ctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||| ||||    
T  27974953 ctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaact 27975025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 142 - 240
Target Start/End: Original strand, 25929445 - 25929541
Alignment:
Q  142 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgttt 240  Q
    ||||||||||||||||  ||||||||||||| ||||||||| |||||| |||||||| ||||||||| |||| |||||||| |||||| ||||||||||    
T  25929445 tttgtatcactttcatcttagtggattggagggctgctctc-cccccagagtaggtcgtattggaccgaactgggttacca-tcttggtgtgtttgttt 25929541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 139 - 213
Target Start/End: Complemental strand, 27453046 - 27452972
Alignment:
Q  139 ccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||  | |||||||||||||||| ||||    
T  27453046 ccctttgtaacactttcatcatagtggattggagagctgctctctcccccggattaggtcatattggaccgaact 27452972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 143 - 213
Target Start/End: Original strand, 27986449 - 27986519
Alignment:
Q  143 ttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||| ||||    
T  27986449 ttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaact 27986519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 143 - 213
Target Start/End: Original strand, 33386669 - 33386739
Alignment:
Q  143 ttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||| ||||    
T  33386669 ttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaact 33386739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 3328259 - 3328455
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattcttt-gtgagcttttaaggtaatttcttgttacccc 141  Q
    |||||||||||||| ||||| |||||||| |||  | |||||||||||||| ||| | ||| |||||| || ||||| |||| ||||||||||| || |     
T  3328259 ttttctcttaggatacattgagagtgtgggtgatatgaaaaatgggtagaaattaggacttgttcttttgtaagcttataagctaatttcttgtaactca 3328358  T
Q  142 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgtt 239  Q
    || ||| |||||||||  |||||||||| || |||||||||||| | | | ||||||||||||||   |||| ||| | || |||||| |||||||||    
T  3328359 tt-gtaacactttcatcttagtggattgaagggctgctctctcctctagattaggtcatattggaatgaactgggtcaacaatcttggtgtgtttgtt 3328455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 43 - 167
Target Start/End: Original strand, 5366226 - 5366351
Alignment:
Q  43 ttttctcttaggattcattg-tgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccc 141  Q
    ||||| |||||||||||||  | ||||||| |||||  ||||| |||||||| |||||  || ||| ||||||| ||||||| ||||||||||| ||| |    
T  5366226 ttttcgcttaggattcatttattagtgtgggtgactagaaaaaagggtagaaattaagattttttcattgtgagattttaagataatttcttgtaacctc 5366325  T
Q  142 tttgtatcactttcattatagtggat 167  Q
    |||||||||||||||| |||||||||    
T  5366326 tttgtatcactttcatcatagtggat 5366351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 46 - 213
Target Start/End: Complemental strand, 29100342 - 29100173
Alignment:
Q  46 tctcttaggattcattg-tgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttaccccttt 144  Q
    ||||||| ||||||||  ||||||| | |||||| ||||| | |||||| ||| |  || ||||||||||| ||||||| ||||||||| | ||| ||||    
T  29100342 tctcttatgattcatttatgagtgtaggtgacttgaaaaacgagtagaaattagggtttgttctttgtgagtttttaagctaatttcttataacctcttt 29100243  T
Q  145 gtatcact-ttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    |||||||| || || |||||||| |||||||||||||||| ||| ||||| ||| || ||||||| ||||    
T  29100242 gtatcactctttatcatagtggaatggagagctgctctcttccctatagtgggtaattttggaccgaact 29100173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 47923806 - 47924005
Alignment:
Q  43 ttttctcttaggattcattgt---gagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtg--agcttttaaggtaatttcttgtta 137  Q
    ||||||| ||||||||||| |   |||||||||||||  | |||||||||| || ||| || ||  ||||||||  | |||||||| ||||||||||| |    
T  47923806 ttttctcgtaggattcattattgagagtgtggatgac--acaaaatgggtataaattaggttttgctctttgtgtaaacttttaagctaatttcttgtaa 47923903  T
Q  138 cccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttg 237  Q
    | | |||||| ||||||||| ||||| ||||| || |||||||||||||| | | |||||||||||||| | |||| ||| | || |||||| |||||||    
T  47923904 ctcttttgtagcactttcatcatagtagattgaagggctgctctctcccctagattaggtcatattggatcgaactgggtcaacaatcttggtgtgtttg 47924003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 43 - 206
Target Start/End: Original strand, 3323593 - 3323756
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattcttt-gtgagcttttaaggtaatttcttgttacccc 141  Q
    ||||||||||| |||||||| |||||||| |||  | || ||||||||||| ||| | ||| |||||| || ||||| |||| ||||||||||| || |     
T  3323593 ttttctcttagaattcattgagagtgtgggtgatatgaacaatgggtagaaattatgacttgttcttttgtaagcttataagctaatttcttgtaactca 3323692  T
Q  142 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgga 206  Q
    || ||| |||||||||  ||||||||||||| |||| |||||| |||| | ||||||||||||||    
T  3323693 tt-gtaacactttcatcttagtggattggagggctgttctctctcccagattaggtcatattgga 3323756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 43 - 172
Target Start/End: Complemental strand, 8126814 - 8126685
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattcttt-gtgagcttttaaggtaatttcttgttacccc 141  Q
    |||||||||| ||||||||| |||||||| ||||  ||||| ||||||||| |||||| || |||||| || ||||| |||| ||||||||||| || |     
T  8126814 ttttctcttaagattcattgagagtgtgggtgacacaaaaa-tgggtagaaattaagtattgttcttttgtaagcttataagctaatttcttgtaactct 8126716  T
Q  142 tttgtatcactttcattatagtggattggag 172  Q
    |||||| |||||||||  |||||||||||||    
T  8126715 tttgtaacactttcatcgtagtggattggag 8126685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 139 - 205
Target Start/End: Original strand, 26928600 - 26928666
Alignment:
Q  139 ccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    ||||||||| ||||||||| |||||||||||||||| |||||||||||||| | |||||||||||||    
T  26928600 ccctttgtaacactttcatcatagtggattggagagttgctctctcccccagattaggtcatattgg 26928666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 80 - 239
Target Start/End: Complemental strand, 37466438 - 37466279
Alignment:
Q  80 aaaaatgggtagaagttaagtcttattcttt-gtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgc 178  Q
    |||||||||||||| ||| | ||| |||||| || ||||| |||  ||||||||||| || | || ||| |||||||||  ||||||||||||| ||| |    
T  37466438 aaaaatgggtagaaattaggacttgttcttttgtaagcttataaattaatttcttgtaactcatt-gtaacactttcatcttagtggattggagggctac 37466340  T
Q  179 tctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgtt 239  Q
    ||||||||||| | |||||||||||||||| ||||  || | || |||||| |||||||||    
T  37466339 tctctcccccagattaggtcatattggaccgaactgtgtcaacaatcttggtgtgtttgtt 37466279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 213
Target Start/End: Original strand, 38210564 - 38210619
Alignment:
Q  158 tatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||    
T  38210564 tatagtggattggagagctgctctctcccccatactaggtcagattggaccgaact 38210619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 205
Target Start/End: Original strand, 2671595 - 2671661
Alignment:
Q  139 ccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    ||||||||| ||||||||| ||| ||||||||||||||||||||||||||| | |||| ||||||||    
T  2671595 ccctttgtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattgg 2671661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 205
Target Start/End: Complemental strand, 7167332 - 7167266
Alignment:
Q  139 ccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    ||||||||| ||||||||| ||| ||||||||||||||||||||||||||| | |||| ||||||||    
T  7167332 ccctttgtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattgg 7167266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 205
Target Start/End: Complemental strand, 8477450 - 8477384
Alignment:
Q  139 ccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    ||||||||| ||||||||| ||| ||||||||||||||||||||||||||| | |||| ||||||||    
T  8477450 ccctttgtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattgg 8477384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 205
Target Start/End: Original strand, 8739072 - 8739138
Alignment:
Q  139 ccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    ||||||||| ||||||||| ||| ||||||||||||||||||||||||||| | |||| ||||||||    
T  8739072 ccctttgtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattgg 8739138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 205
Target Start/End: Original strand, 9091310 - 9091376
Alignment:
Q  139 ccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    ||||||||| ||||||||| ||| ||||||||||||||||||||||||||| | |||| ||||||||    
T  9091310 ccctttgtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattgg 9091376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 205
Target Start/End: Original strand, 40372804 - 40372870
Alignment:
Q  139 ccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    ||||||||| ||||||||| ||| ||||||||||||||||||||||||||| | |||| ||||||||    
T  40372804 ccctttgtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattgg 40372870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 143 - 213
Target Start/End: Original strand, 39039995 - 39040065
Alignment:
Q  143 ttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||| ||||||||| |||||||||||||||| || ||||| ||||| | |||||||||||||||| ||||    
T  39039995 ttgtaacactttcatcatagtggattggagagttgttctcttccccagattaggtcatattggaccgaact 39040065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 213
Target Start/End: Complemental strand, 6063509 - 6063454
Alignment:
Q  158 tatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||||||||| |||||||||||||||| | ||||||| |||||||| ||||    
T  6063509 tatagtggattggagggctgctctctcccccagactaggtcagattggaccgaact 6063454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 200
Target Start/End: Original strand, 6303420 - 6303467
Alignment:
Q  153 ttcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    ||||||||||||||| ||||||||||||||||||||| | ||||||||    
T  6303420 ttcattatagtggatcggagagctgctctctcccccagactaggtcat 6303467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 200
Target Start/End: Complemental strand, 10094146 - 10094099
Alignment:
Q  153 ttcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    ||||||||||||||| ||||||||||||||||||||| | ||||||||    
T  10094146 ttcattatagtggatcggagagctgctctctcccccagactaggtcat 10094099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 200
Target Start/End: Complemental strand, 10100163 - 10100116
Alignment:
Q  153 ttcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    ||||||||||||||| ||||||||||||||||||||| | ||||||||    
T  10100163 ttcattatagtggatcggagagctgctctctcccccagactaggtcat 10100116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 200
Target Start/End: Complemental strand, 10201026 - 10200979
Alignment:
Q  153 ttcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    ||||||||||||||| ||||||||||||||||||||| | ||||||||    
T  10201026 ttcattatagtggatcggagagctgctctctcccccagactaggtcat 10200979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 133
Target Start/End: Complemental strand, 25517159 - 25517076
Alignment:
Q  50 ttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttctt 133  Q
    ||||| |||| ||||||||||| |||||| ||||||  |||||| ||| |  || ||||||||||||||||||| |||||||||    
T  25517159 ttagggttcactgtgagtgtgggtgacttgaaaaataagtagaaattagggtttgttctttgtgagcttttaagctaatttctt 25517076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 213
Target Start/End: Original strand, 50494193 - 50494248
Alignment:
Q  158 tatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||||||||| |||||||||||||||| | ||||||| |||||||| ||||    
T  50494193 tatagtggattggagggctgctctctcccccagactaggtcagattggaccgaact 50494248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 139 - 205
Target Start/End: Complemental strand, 1306036 - 1305970
Alignment:
Q  139 ccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    ||||||||| |||||||||  |||||||||||||||||||| ||||||| | | |||| ||||||||    
T  1306036 ccctttgtaacactttcatcgtagtggattggagagctgctatctcccctagattaggccatattgg 1305970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 154 - 200
Target Start/End: Complemental strand, 10595104 - 10595058
Alignment:
Q  154 tcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    |||||||||||||  ||||||||||||||||||||||| ||||||||    
T  10595104 tcattatagtggaacggagagctgctctctcccccatactaggtcat 10595058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 154 - 200
Target Start/End: Original strand, 10897117 - 10897163
Alignment:
Q  154 tcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    |||||||||||||| ||||||||||||||||||||| | ||||||||    
T  10897117 tcattatagtggatcggagagctgctctctcccccagactaggtcat 10897163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 28413095 - 28413045
Alignment:
Q  158 tatagtggattggagagctgctctctcccccatagtaggtcatattggacc 208  Q
    ||||||||||||||| |||||||||||||||| | ||||||| ||||||||    
T  28413095 tatagtggattggagggctgctctctcccccagactaggtcagattggacc 28413045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 154 - 200
Target Start/End: Original strand, 54193338 - 54193384
Alignment:
Q  154 tcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    |||||||||||||| ||||||||||||||||||||| | ||||||||    
T  54193338 tcattatagtggatcggagagctgctctctcccccagactaggtcat 54193384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 154
Target Start/End: Complemental strand, 23392063 - 23391989
Alignment:
Q  81 aaaatgggtagaagttaagtcttattctttgtgagctt--ttaaggtaatttcttgttacccctttgtatcacttt 154  Q
    |||||| |||||| |||||| || ||||||||||||||  ||||| ||||||||||| |||| |||||||||||||    
T  23392063 aaaatgagtagaaattaagt-ttgttctttgtgagcttgtttaagataatttcttgtaacccatttgtatcacttt 23391989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 213
Target Start/End: Original strand, 458478 - 458533
Alignment:
Q  158 tatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||||||||| |||||||||||||||| | |||||||  ||||||| ||||    
T  458478 tatagtggattggagggctgctctctcccccagactaggtcaggttggaccgaact 458533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 153 - 200
Target Start/End: Complemental strand, 10208072 - 10208025
Alignment:
Q  153 ttcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    ||||||||||||||| |||||||||||||||||| || | ||||||||    
T  10208072 ttcattatagtggatcggagagctgctctctcccgcagactaggtcat 10208025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 213
Target Start/End: Complemental strand, 10621593 - 10621538
Alignment:
Q  158 tatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||||||||| |||||||||||||||| | ||| ||| |||||||| ||||    
T  10621593 tatagtggattggagggctgctctctcccccagactagctcagattggaccgaact 10621538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 205
Target Start/End: Complemental strand, 18656519 - 18656457
Alignment:
Q  142 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    |||||| ||||||| | ||| ||||||||||||||||||||||||||| | |||| ||||||||    
T  18656519 tttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 18656457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 205
Target Start/End: Original strand, 22173196 - 22173258
Alignment:
Q  142 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    |||||| ||||||| | ||| ||||||||||||||||||||||||||| | |||| ||||||||    
T  22173196 tttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 22173258  T

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Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 153 - 200
Target Start/End: Original strand, 27544383 - 27544430
Alignment:
Q  153 ttcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    ||||||||||||||| |||||||||||||||||| || | ||||||||    
T  27544383 ttcattatagtggatcggagagctgctctctccctcagactaggtcat 27544430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 200
Target Start/End: Original strand, 5858656 - 5858702
Alignment:
Q  154 tcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    ||||||||||||||  |||||||||||||||||||| | ||||||||    
T  5858656 tcattatagtggatcagagagctgctctctcccccagactaggtcat 5858702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 200
Target Start/End: Complemental strand, 10612848 - 10612802
Alignment:
Q  154 tcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    |||||||||||||  ||||||||||||||||||||| | ||||||||    
T  10612848 tcattatagtggaacggagagctgctctctcccccagactaggtcat 10612802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 200
Target Start/End: Original strand, 11079629 - 11079675
Alignment:
Q  154 tcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    |||||||||||||  ||||||||||||||||||||| | ||||||||    
T  11079629 tcattatagtggaacggagagctgctctctcccccagactaggtcat 11079675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 200
Target Start/End: Complemental strand, 22626054 - 22626008
Alignment:
Q  154 tcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    |||||||||||||| ||||| ||||||||||||||| | ||||||||    
T  22626054 tcattatagtggatcggagaactgctctctcccccagactaggtcat 22626008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 213
Target Start/End: Original strand, 23941956 - 23942014
Alignment:
Q  156 attatagtggattggagagctgctctctcccccatagtaggtca-tattggaccaaact 213  Q
    |||||||||||  | |||| |||||||||| ||||||||||||| ||||||||||||||    
T  23941956 attatagtggagcgaagagttgctctctcctccatagtaggtcagtattggaccaaact 23942014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 200
Target Start/End: Complemental strand, 29914025 - 29913979
Alignment:
Q  154 tcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    |||||||||||||| | ||||||||||||||||||| | ||||||||    
T  29914025 tcattatagtggatcgaagagctgctctctcccccagactaggtcat 29913979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 213
Target Start/End: Complemental strand, 35925663 - 35925497
Alignment:
Q  43 ttttctcttaggattcat--tgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacc 139  Q
    ||||||||||||||||||  |||||| |||| ||||   | |||||||||||| ||| || || ||||  ||| ||||| |||  ||||||||||| ||     
T  35925663 ttttctcttaggattcatattgtgagagtgggtgac---acaaatgggtagaaattaggttttgttctagtgtaagcttataaactaatttcttgtaact 35925567  T
Q  140 cctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    | |||||| ||||||||| ||||||||||||||| ||||   | | |||| | |||||||||||||||| ||||    
T  35925566 c-tttgtaacactttcatcatagtggattggagaactgc---ccctcccaaattaggtcatattggaccgaact 35925497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 200
Target Start/End: Complemental strand, 48390372 - 48390326
Alignment:
Q  154 tcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    |||||||||||||  ||||||||||||||||||||| | ||||||||    
T  48390372 tcattatagtggaacggagagctgctctctcccccagactaggtcat 48390326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 76
Target Start/End: Original strand, 25929299 - 25929332
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgac 76  Q
    ||||||||||||||||||||||||||||| ||||    
T  25929299 ttttctcttaggattcattgtgagtgtgggtgac 25929332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 154 - 187
Target Start/End: Original strand, 54188621 - 54188654
Alignment:
Q  154 tcattatagtggattggagagctgctctctcccc 187  Q
    |||||||||||||| |||||||||||||||||||    
T  54188621 tcattatagtggatcggagagctgctctctcccc 54188654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 198
Target Start/End: Original strand, 456101 - 456141
Alignment:
Q  158 tatagtggattggagagctgctctctcccccatagtaggtc 198  Q
    ||||||||||||||| |||||||||||||||| | ||||||    
T  456101 tatagtggattggagggctgctctctcccccagactaggtc 456141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 154
Target Start/End: Original strand, 760861 - 760935
Alignment:
Q  81 aaaatgggtagaagttaagtcttattctttgtgagctt--ttaaggtaatttcttgttacccctttgtatcacttt 154  Q
    ||||||||||||| ||| ||||  ||||||||||||||  ||||| ||||||||||| |||| |||||||| ||||    
T  760861 aaaatgggtagaaattaggtctg-ttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatcccttt 760935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 213
Target Start/End: Complemental strand, 1620528 - 1620468
Alignment:
Q  154 tcattatagtggattggagagctgctctctcccccatagtaggtca-tattggaccaaact 213  Q
    |||||||||||||  |||| |||||||||||||| | | ||||||| ||||||||||||||    
T  1620528 tcattatagtggaacggagggctgctctctcccctagactaggtcagtattggaccaaact 1620468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 11168306 - 11168354
Alignment:
Q  169 ggagagctgctctctcccccatagtaggtcatattggaccaaacttggt 217  Q
    |||| |||||||||||||||| | |||||||  ||||||||||||||||    
T  11168306 ggagggctgctctctcccccagactaggtcaatttggaccaaacttggt 11168354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 154
Target Start/End: Complemental strand, 22835156 - 22835082
Alignment:
Q  81 aaaatgggtagaagttaagtcttattctttgtgagctt--ttaaggtaatttcttgttacccctttgtatcacttt 154  Q
    ||||||||||||| ||| || || ||||||||||||||  ||||| ||||||||||| |||| |||||||| ||||    
T  22835156 aaaatgggtagaaattaggt-ttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatcccttt 22835082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 154
Target Start/End: Complemental strand, 23410483 - 23410409
Alignment:
Q  81 aaaatgggtagaagttaagtcttattctttgtgagctt--ttaaggtaatttcttgttacccctttgtatcacttt 154  Q
    ||||||||||||| ||| || |||||||||||||||||  ||||| ||||||| | | |||| |||||||||||||    
T  23410483 aaaatgggtagaaattatgt-ttattctttgtgagcttgtttaagctaatttcgtataacccatttgtatcacttt 23410409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 154
Target Start/End: Original strand, 29682373 - 29682447
Alignment:
Q  81 aaaatgggtagaagttaagtcttattctttgtgagctt--ttaaggtaatttcttgttacccctttgtatcacttt 154  Q
    ||||||||||||| ||| || || ||||||||||||||  ||||| ||||||||||| |||| |||||||| ||||    
T  29682373 aaaatgggtagaaattatgt-ttgttctttgtgagcttgtttaagctaatttcttgtcacccatttgtatcccttt 29682447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 154
Target Start/End: Original strand, 32891117 - 32891192
Alignment:
Q  81 aaaatgggtagaagttaagtcttattctttgtgagct--tttaaggtaatttcttgttacccctttgtatcacttt 154  Q
    ||||||||||||| |||||| || |||||||||||||  || ||| ||||||||||| || | |||||||| ||||    
T  32891117 aaaatgggtagaaattaagttttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctcttt 32891192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 213
Target Start/End: Complemental strand, 36871368 - 36871308
Alignment:
Q  154 tcattatagtggattggagagctgctctctcccccatagtaggtca-tattggaccaaact 213  Q
    |||||||||||||  |||| |||||||||||||||| | ||||||| ||||||||| ||||    
T  36871368 tcattatagtggaacggagggctgctctctcccccagactaggtcagtattggaccgaact 36871308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 75; Significance: 1e-34; HSPs: 51)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 5572155 - 5572350
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccc 141  Q
    |||||||||||||||||||| |||||||| ||||  | |||||| |||||| ||| ||||| ||||| ||| ||||| |||| ||||||||||| || |     
T  5572155 ttttctcttaggattcattgagagtgtgggtgac--acaaaatgcgtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactct 5572252  T
Q  142 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgtt 239  Q
    |||||| ||||||||| |||||||||||||| |||||||||||||| | | |||||||||||||||| || | ||| | || |||||| |||||||||    
T  5572253 tttgtaacactttcatcatagtggattggagggctgctctctcccctagattaggtcatattggaccgaattgggtcaacaatcttggtgtgtttgtt 5572350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 43 - 239
Target Start/End: Complemental strand, 31979697 - 31979501
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattcttt-gtgagcttttaaggtaatttcttgttacccc 141  Q
    |||||||||||||||||||| |||||||| ||||  ||||| ||||||||| ||| ||||| |||||| || ||||| |||| ||||||||||| || |     
T  31979697 ttttctcttaggattcattgagagtgtgggtgacacaaaaa-tgggtagaaattaggtcttgttcttttgtaagcttataagttaatttcttgtaactct 31979599  T
Q  142 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgtt 239  Q
    |||| | |||||||||  ||||||||||||| |||||||||||||||| | || ||||||||||||| |||| ||| | || |||||| |||||||||    
T  31979598 tttgcaacactttcatcttagtggattggagggctgctctctcccccagattatgtcatattggaccgaactgggtcaacaatcttggtgtgtttgtt 31979501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 43 - 240
Target Start/End: Original strand, 31076849 - 31077051
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgact-----taaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgtta 137  Q
    |||||||||||||||||| |||| ||||| |||||     | |||||||| || || ||| ||||| |||||||||| || ||||| |||||| |||| |    
T  31076849 ttttctcttaggattcatagtgattgtgggtgacttgaaattaaaaatggataaaaattaggtcttgttctttgtgaactcttaagctaatttattgtaa 31076948  T
Q  138 cccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttg 237  Q
    ||| ||||||||||||| ||  |||||||||||||||||||| |||||   | ||||||||||||||||| ||||| |||||||| ||||||  ||||||    
T  31076949 cccatttgtatcacttttatcttagtggattggagagctgctatctcctagagagtaggtcatattggactaaactaggttaccaatcttggtatgtttg 31077048  T
Q  238 ttt 240  Q
    |||    
T  31077049 ttt 31077051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 10077081 - 10077274
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattcttt-gtgagcttttaaggtaatttcttgttacccc 141  Q
    |||| |||||||||||||||  ||||||| ||||  | ||||||||||||| ||| ||||| |||||| || ||||| |||| ||||||||||| ||       
T  10077081 ttttatcttaggattcattg--agtgtgggtgac--acaaaatgggtagaaattaggtcttgttcttttgtaagcttataagctaatttcttgtaacttt 10077176  T
Q  142 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgtt 239  Q
    |||||| ||||||||| |||||||||||||| |||||||||||||||| | |||||||||||||||| || | ||| | || |||||| |||||||||    
T  10077177 tttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaattgggtcaacaatcttggtgtgtttgtt 10077274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 31086386 - 31086582
Alignment:
Q  43 ttttctcttaggattcattgt-gagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttaccc 140  Q
    ||||||||||||||||||| | |||||||| ||||  | ||||||||||||| ||| |||||  |||| ||| ||||| |||| ||||||||||| || |    
T  31086386 ttttctcttaggattcattattgagtgtgggtgac--acaaaatgggtagaaattaggtcttgctcttgtgtaagcttataagctaatttcttgtaactc 31086483  T
Q  141 ctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgtt 239  Q
    ||||||| ||||||||| |||||||||||||||| |||||||||||| | | ||| |||||||||||  |||| ||| | || |||||| |||||||||    
T  31086484 ctttgtaacactttcatcatagtggattggagagttgctctctcccctagattagatcatattggactgaactgggtcaacaatcttggtgtgtttgtt 31086582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 43 - 207
Target Start/End: Original strand, 21801257 - 21801421
Alignment:
Q  43 ttttctcttaggattcatt-gtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattcttt-gtgagcttttaaggtaatttcttgttaccc 140  Q
    |||||||||||| |||||| | |||||||| ||||  | ||||||||||||| ||||||||| |||||| || ||||| |||| ||||||||||| || |    
T  21801257 ttttctcttagggttcatttgagagtgtgggtgac--acaaaatgggtagaaattaagtcttgttcttttgtaagcttataagataatttcttgtaactc 21801354  T
Q  141 ctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggac 207  Q
     |||||| |||||| ||  ||||||||||||||||||||| |||||||| | |||||||||||||||    
T  21801355 ttttgtaacacttttatcttagtggattggagagctgctcgctcccccagattaggtcatattggac 21801421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 43 - 240
Target Start/End: Original strand, 24435884 - 24436080
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattcttt-gtgagcttttaaggtaatttcttgttacccc 141  Q
    ||||||||||||||||||| ||| ||||| |||  |||||| ||||||||| ||| ||||| || ||| || ||||| |||| ||||||||||| |  |     
T  24435884 ttttctcttaggattcattatgaatgtgggtgatataaaaa-tgggtagaaattaggtcttgtttttttgtaagcttataagctaatttcttgtaattca 24435982  T
Q  142 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgttt 240  Q
    |||||| || ||||||  |||||||| |||| |||||||||||||| | |||||||||||||||| | |||| |||||||| |||||| ||||||||||    
T  24435983 tttgtaacattttcatcctagtggatcggagggctgctctctcccctagagtaggtcatattggatcgaactgggttacca-tcttggtgtgtttgttt 24436080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 43 - 208
Target Start/End: Complemental strand, 18233031 - 18232864
Alignment:
Q  43 ttttctcttaggattcattgt---gagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttac 138  Q
    ||||||||||||||||||| |   |||||||| ||||  | ||||||||||||| ||| ||||| ||||| ||| ||||| |||| | ||||||||| ||    
T  18233031 ttttctcttaggattcattattgagagtgtgggtgac--acaaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctgatttcttgtaac 18232934  T
Q  139 ccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggacc 208  Q
     | |||||| ||||||||| |||||| ||||||| | |||||||||||||| | ||||||||||||||||    
T  18232933 tcttttgtaacactttcatcatagtgaattggagggttgctctctcccccagattaggtcatattggacc 18232864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 43 - 185
Target Start/End: Original strand, 1115017 - 1115159
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccct 142  Q
    ||||||||||  ||||||||||||||||| |||||| |||||||| ||||| ||| |  || || ||| |||||||||||| | ||||||||| |||  |    
T  1115017 ttttctcttaatattcattgtgagtgtgggtgacttgaaaaatggatagaaattagggtttgttatttttgagcttttaagttgatttcttgtaacctat 1115116  T
Q  143 ttgtatcactttcattatagtggattggagagctgctctctcc 185  Q
    |||||||| | | || ||||||||||||||| |||||||||||    
T  1115117 ttgtatcattcttatcatagtggattggagatctgctctctcc 1115159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 43 - 213
Target Start/End: Complemental strand, 14521857 - 14521688
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccct 142  Q
    ||||||||||||||| |||| |||||||| |||| | ||||||| |||||| ||| ||  | ||||||||||||| ||  | |||||| |||| || | |    
T  14521857 ttttctcttaggatttattgagagtgtgggtgacatgaaaaatgtgtagaaattaggttgtgttctttgtgagctcttgtgctaattt-ttgtaactcat 14521759  T
Q  143 ttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    |||||||||||||||  || || ||||||||| |||||||||| | | |||||||||||||||||| ||||    
T  14521758 ttgtatcactttcatcttattgaattggagaggtgctctctcctcgagagtaggtcatattggaccgaact 14521688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 141 - 213
Target Start/End: Original strand, 5757489 - 5757561
Alignment:
Q  141 ctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||| ||||    
T  5757489 ctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaact 5757561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 43 - 207
Target Start/End: Complemental strand, 4630138 - 4629974
Alignment:
Q  43 ttttctcttaggattcatt-gtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattcttt-gtgagcttttaaggtaatttcttgttaccc 140  Q
    ||||||||||||||||||| | |||| ||| ||||  | ||||| ||||||| ||| ||||| |||||| || ||||| |||| ||||||||||| ||      
T  4630138 ttttctcttaggattcatttgagagtttgggtgac--acaaaataggtagaaattaggtcttgttcttttgtaagcttataagttaatttcttgtaacta 4630041  T
Q  141 ctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggac 207  Q
     |||||| |||||||||  |||||||||||||||||||||||| ||| | | |||||||||||||||    
T  4630040 ttttgtaacactttcatcttagtggattggagagctgctctcttccctagattaggtcatattggac 4629974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 79 - 239
Target Start/End: Complemental strand, 22963847 - 22963688
Alignment:
Q  79 aaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgc 178  Q
    ||||||||||||||| ||| | ||| || | ||| || || |||| ||||||||||| || | |||||| ||||||||| |||||||||||||| |||||    
T  22963847 aaaaaatgggtagaaattacggcttgttttgtgtaaggttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgc 22963748  T
Q  179 tctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgtt 239  Q
    ||||| ||||| | | |||||||||| ||| |||| ||| | || |||||| |||||||||    
T  22963747 tctct-ccccagatttggtcatattgcaccgaactgggtcaacaatcttggtgtgtttgtt 22963688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 79 - 239
Target Start/End: Original strand, 23824546 - 23824705
Alignment:
Q  79 aaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgc 178  Q
    ||||||||||||||| ||| | ||| || | ||| || || |||| ||||||||||| || | |||||| ||||||||| |||||||||||||| |||||    
T  23824546 aaaaaatgggtagaaattacggcttgttttgtgtaaggttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgc 23824645  T
Q  179 tctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgtt 239  Q
    ||||| ||||| | | |||||||||| ||| |||| ||| | || |||||| |||||||||    
T  23824646 tctct-ccccagatttggtcatattgcaccgaactgggtcaacaatcttggtgtgtttgtt 23824705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 31936671 - 31936575
Alignment:
Q  143 ttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgtt 239  Q
    ||||| |||||||||  ||||||||||||||||||||||||| |||| | |||||||||||||||| |||| ||| | || |||||| |||||||||    
T  31936671 ttgtaacactttcatattagtggattggagagctgctctctctcccagactaggtcatattggaccgaactaggtcaacaatcttggtgtgtttgtt 31936575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 64 - 208
Target Start/End: Complemental strand, 27165847 - 27165702
Alignment:
Q  64 gagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttctt-gttacccctttgtatcactttcattatag 162  Q
    |||||||| | |||| |||||||| ||||| || ||| || |||| | | |||| ||| | |||||| || || ||||| |||||||||||||||  |||    
T  27165847 gagtgtgggtaacttcaaaaatggatagaaattcagttttgttctctataagctcttatgctaatttttttgtaaccccgttgtatcactttcatcttag 27165748  T
Q  163 tggattggagagctgctctctcccccatagtaggtcatattggacc 208  Q
    | |||||||| ||| |||| ||||||||||||||||||||||||||    
T  27165747 ttgattggagggctactctgtcccccatagtaggtcatattggacc 27165702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 149 - 213
Target Start/End: Complemental strand, 21356114 - 21356050
Alignment:
Q  149 cactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||| ||||||||||||||||||||||||||| ||| | |||||||||||||||| ||||    
T  21356114 cactttcatcatagtggattggagagctgctctctcctccagattaggtcatattggaccgaact 21356050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 205
Target Start/End: Original strand, 5674779 - 5674845
Alignment:
Q  139 ccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    ||||||||| ||||||||| ||| ||||||||||||||||||||||||||| | |||| ||||||||    
T  5674779 ccctttgtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattgg 5674845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 143 - 213
Target Start/End: Complemental strand, 22709102 - 22709032
Alignment:
Q  143 ttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||| | ||| |||||||| ||| ||||    
T  22709102 ttgtaacactttcatcatagtggattggagagctgctctctcccccagattagatcatattgaaccgaact 22709032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 167
Target Start/End: Original strand, 30518058 - 30518165
Alignment:
Q  60 ttgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccctttgtatcactttcatta 159  Q
    |||||||||||| | |||| |||||| ||||||| |||||  || |||||||||| |||||||| || |||| ||| ||| |||||||||||| | || |    
T  30518058 ttgtgagtgtgggtaacttgaaaaataggtagaaattaaggtttgttctttgtgaacttttaagttagtttcatgtaacctctttgtatcactcttatca 30518157  T
Q  160 tagtggat 167  Q
    ||||||||    
T  30518158 tagtggat 30518165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 213
Target Start/End: Original strand, 33721471 - 33721642
Alignment:
Q  43 ttttctcttaggattcattgtg-agtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccc 141  Q
    |||||||||||||||||||  | ||||||  |||| |||||||||||   || ||| || || |||||| |||| ||||||  ||||||||||| ||| |    
T  33721471 ttttctcttaggattcatttaggagtgtgtgtgacctaaaaaatgggggaaaattaggttttgttctttatgagtttttaaactaatttcttgtaacctc 33721570  T
Q  142 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||| | | | || |||||||||  ||||| || ||||| ||||||||||| |||| |||||| |||||    
T  33721571 tttgtataattcttatcatagtggatcagagagttgttctcttccccatagtagatcattttggactaaact 33721642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 43 - 135
Target Start/End: Complemental strand, 99339 - 99248
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgt 135  Q
    ||||||| ||||||||||||||||||||  | |||| |||||||||||||| ||||   || |||| ||||||||| |||| |||||||||||    
T  99339 ttttctcataggattcattgtgagtgtgagtaactt-aaaaatgggtagaaattaaagtttgttctctgtgagcttctaagctaatttcttgt 99248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 5017482 - 5017578
Alignment:
Q  143 ttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgtt 239  Q
    ||||| ||||||||| ||||| |||||||| | |||||||||||| | | ||||||||||| |||| |||| ||| | || |||||| |||||||||    
T  5017482 ttgtaacactttcatcatagtagattggagggttgctctctcccctagattaggtcatatttgaccgaactgggtcaacaatcttggtgtgtttgtt 5017578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 205
Target Start/End: Complemental strand, 11857058 - 11856996
Alignment:
Q  142 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    |||||| ||||||| | ||| ||||||||||||||||||||||||||||| |||| ||||||||    
T  11857058 tttgtaacactttc-tcatattggattggagagctgctctctcccccatattaggccatattgg 11856996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 213
Target Start/End: Complemental strand, 12195580 - 12195525
Alignment:
Q  158 tatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||||||||| |||||||||||||||| | ||||||| |||||||| ||||    
T  12195580 tatagtggattggagggctgctctctcccccagactaggtcagattggaccgaact 12195525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 200
Target Start/End: Original strand, 13878837 - 13878884
Alignment:
Q  153 ttcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    ||||||||||||||| ||||||||||||||||||||| | ||||||||    
T  13878837 ttcattatagtggatcggagagctgctctctcccccagactaggtcat 13878884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 200
Target Start/End: Original strand, 13883585 - 13883632
Alignment:
Q  153 ttcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    ||||||||||||||| ||||||||||||||||||||| | ||||||||    
T  13883585 ttcattatagtggatcggagagctgctctctcccccagactaggtcat 13883632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 205
Target Start/End: Original strand, 14742437 - 14742499
Alignment:
Q  142 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    |||||| ||||||| | ||| ||||||||||||||||||||||||||| | |||||||||||||    
T  14742437 tttgtaacactttc-tcatattggattggagagctgctctctcccccaaattaggtcatattgg 14742499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 200
Target Start/End: Original strand, 16786029 - 16786076
Alignment:
Q  153 ttcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    ||||||||||||||| ||||||||||||||||||||| | ||||||||    
T  16786029 ttcattatagtggatcggagagctgctctctcccccagactaggtcat 16786076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 213
Target Start/End: Complemental strand, 5273282 - 5273226
Alignment:
Q  157 ttatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    |||||||||||||||| |||||||||||||||| | |||||||  ||||||| ||||    
T  5273282 ttatagtggattggagggctgctctctcccccagactaggtcaatttggaccgaact 5273226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 213
Target Start/End: Original strand, 7294040 - 7294100
Alignment:
Q  154 tcattatagtggattggagagctgctctctcccccatagtaggtca-tattggaccaaact 213  Q
    |||||||||||||   ||||| |||||||||||||| ||||||||| ||||||||||||||    
T  7294040 tcattatagtggaacagagagttgctctctcccccagagtaggtcagtattggaccaaact 7294100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 213
Target Start/End: Complemental strand, 16455494 - 16455434
Alignment:
Q  154 tcattatagtggattggagagctgctctctcccccatagtaggtca-tattggaccaaact 213  Q
    |||||||||||||  |||| |||||||||||||||||| ||||||| ||||||||| ||||    
T  16455494 tcattatagtggaacggagggctgctctctcccccatactaggtcagtattggaccgaact 16455434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 213
Target Start/End: Complemental strand, 4816296 - 4816241
Alignment:
Q  158 tatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||||||||| |||||||||||||||| | |||||||  ||||||| ||||    
T  4816296 tatagtggattggagggctgctctctcccccagactaggtcaatttggaccgaact 4816241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 205
Target Start/End: Original strand, 14737577 - 14737639
Alignment:
Q  142 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    |||||| ||||||| | ||| ||||||||||||||||||||||||||| | |||| ||||||||    
T  14737577 tttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 14737639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 213
Target Start/End: Complemental strand, 19704632 - 19704577
Alignment:
Q  158 tatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||||||||| |||||||||||||||| | |||||||  ||||||| ||||    
T  19704632 tatagtggattggagggctgctctctcccccagactaggtcaatttggaccgaact 19704577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 213
Target Start/End: Complemental strand, 20915421 - 20915366
Alignment:
Q  158 tatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||||||||| |||||||||||||||| | |||||||  ||||||| ||||    
T  20915421 tatagtggattggagggctgctctctcccccagactaggtcaatttggaccgaact 20915366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 205
Target Start/End: Original strand, 22010698 - 22010760
Alignment:
Q  142 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    |||||| ||||||| | ||| ||||||||||||||||||||||||||| | |||| ||||||||    
T  22010698 tttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 22010760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 213
Target Start/End: Complemental strand, 26932627 - 26932572
Alignment:
Q  158 tatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||||||||| | |||||||||||||| | ||||||| |||||||| ||||    
T  26932627 tatagtggattggagggttgctctctcccccagactaggtcagattggaccgaact 26932572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 213
Target Start/End: Original strand, 30967450 - 30967505
Alignment:
Q  158 tatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    |||||||||| ||||||||||||||||||||| | |||||||  ||||||| ||||    
T  30967450 tatagtggatcggagagctgctctctcccccaaactaggtcaatttggaccgaact 30967505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 153 - 200
Target Start/End: Complemental strand, 31248786 - 31248739
Alignment:
Q  153 ttcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    ||||||||||||||| |||||||| |||||||||| ||| ||||||||    
T  31248786 ttcattatagtggatcggagagctactctctcccctatactaggtcat 31248739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 153 - 200
Target Start/End: Complemental strand, 35201398 - 35201351
Alignment:
Q  153 ttcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    ||||||||||||||| ||||||||||||||||||| | | ||||||||    
T  35201398 ttcattatagtggatcggagagctgctctctccccaagactaggtcat 35201351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 200
Target Start/End: Complemental strand, 5165883 - 5165837
Alignment:
Q  154 tcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    ||||||||||||| ||||||| |||| ||||||||| ||||||||||    
T  5165883 tcattatagtggaatggagagttgctatctcccccagagtaggtcat 5165837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 205
Target Start/End: Complemental strand, 6438565 - 6438523
Alignment:
Q  163 tggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    ||||||||||||||||||||||||||| | |||| ||||||||    
T  6438565 tggattggagagctgctctctcccccagattaggccatattgg 6438523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 200
Target Start/End: Original strand, 17065964 - 17066010
Alignment:
Q  154 tcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    |||||||||||||  ||| ||||||||||||||||| ||||||||||    
T  17065964 tcattatagtggaacggatagctgctctctcccccaaagtaggtcat 17066010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 200
Target Start/End: Original strand, 25941781 - 25941827
Alignment:
Q  154 tcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    |||||||||||||  ||||||||||||||||||||| | ||||||||    
T  25941781 tcattatagtggaacggagagctgctctctcccccagactaggtcat 25941827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 213
Target Start/End: Complemental strand, 29754773 - 29754719
Alignment:
Q  159 atagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||| |||| |||||||||||||||| | ||||||| |||||||| ||||    
T  29754773 atagtggatcggagggctgctctctcccccagactaggtcagattggaccgaact 29754719  T

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Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 97
Target Start/End: Complemental strand, 31936761 - 31936707
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagtta 97  Q
    |||||||||||||||||||| |||||||| |||  | |||||||||||||| |||    
T  31936761 ttttctcttaggattcattgagagtgtgggtgatatgaaaaatgggtagaaatta 31936707  T

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Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 200
Target Start/End: Original strand, 33215939 - 33215985
Alignment:
Q  154 tcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    |||||||||||||  ||||||||||||| ||||||||| ||||||||    
T  33215939 tcattatagtggaacggagagctgctctatcccccatactaggtcat 33215985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 33309106 - 33309160
Alignment:
Q  159 atagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||| |||| |||||||||||||||| | ||||||| |||||||| ||||    
T  33309106 atagtggatcggagggctgctctctcccccagactaggtcagattggaccgaact 33309160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 205
Target Start/End: Original strand, 33335963 - 33336005
Alignment:
Q  163 tggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    ||||||||||||||||||||||||||| | ||||||| |||||    
T  33335963 tggattggagagctgctctctcccccagattaggtcacattgg 33336005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 205
Target Start/End: Complemental strand, 28184567 - 28184527
Alignment:
Q  165 gattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    ||||||||||||||||||||||||| | |||| ||||||||    
T  28184567 gattggagagctgctctctcccccagattaggccatattgg 28184527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 68; Significance: 2e-30; HSPs: 4)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 43 - 239
Target Start/End: Complemental strand, 5869 - 5671
Alignment:
Q  43 ttttctcttaggattcat---tgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttac 138  Q
    ||||||||||||||||||   || |||||||| ||||  | |||||| |||||| ||||||||| ||||| ||| ||||| |||| |||||||||||  |    
T  5869 ttttctcttaggattcatcattgagagtgtgggtgac--acaaaatgagtagaaattaagtcttgttcttgtgtaagcttataagctaatttcttgtatc 5772  T
Q  139 ccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgt 238  Q
     | |||||| ||||||||| ||||||||||| || |||||||||||||||| | |||||||||||||||| |||| ||| | || |||||| ||||||||    
T  5771 tcttttgtaacactttcatcatagtggattgaagggctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgt 5672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 57 - 239
Target Start/End: Complemental strand, 2661 - 2480
Alignment:
Q  57 tcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccctttgtatcactttc 155  Q
    |||||| |||||||| ||||  | ||||||||||||| |||  |||| ||||| ||| ||||| |||| ||||||||| | |  | |||||| |||||||    
T  2661 tcattgagagtgtgggtgac--acaaaatgggtagaaattagttcttgttcttgtgtaagcttataagctaatttcttataattcttttgtaacactttc 2564  T
Q  156 attatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgtt 239  Q
    || |||||||||||||| |||||| ||||||||| | |||||||||||||| | |||| ||| | || |||||| |||||||||    
T  2563 atcatagtggattggagggctgctgtctcccccagattaggtcatattggagcgaactgggtcaacaatcttggtgtgtttgtt 2480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 213
Target Start/End: Original strand, 133291 - 133363
Alignment:
Q  141 ctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||| || |||||| ||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||    
T  133291 ctttgtaacattttcatcatagtggattggagagctgctctctcccccatattaggtcatattgaacctaact 133363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 185
Target Start/End: Original strand, 224929 - 224961
Alignment:
Q  153 ttcattatagtggattggagagctgctctctcc 185  Q
    ||||||||||||||| |||||||||||||||||    
T  224929 ttcattatagtggatcggagagctgctctctcc 224961  T

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Target: scaffold0078 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 43 - 222
Target Start/End: Complemental strand, 23715 - 23533
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgtta----c 138  Q
    ||||||||||||||||||||||||||||  |||| | |||| ||||||||| |||  |||| || ||||||||||| ||||  |||||||||| |    |    
T  23715 ttttctcttaggattcattgtgagtgtgtctgacatgaaaa-tgggtagaaattagatcttgttttttgtgagcttctaagaaaatttcttgtaattaac 23617  T
Q  139 ccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggttacca 222  Q
    |  ||||||||||||||||  ||||| |||||| |||| || ||||||| | |||||||||||||||||| |||| ||||||||    
T  23616 ctatttgtatcactttcatcttagtgaattggatagcttctttctcccctaaagtaggtcatattggaccgaactaggttacca 23533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 207
Target Start/End: Complemental strand, 43338 - 43274
Alignment:
Q  143 ttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggac 207  Q
    |||||||||||||||  ||||||||| ||||  || ||||||| | | |||||||||||||||||    
T  43338 ttgtatcactttcatcttagtggattagagaattgttctctcctctagagtaggtcatattggac 43274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 89 - 239
Target Start/End: Complemental strand, 10868 - 10717
Alignment:
Q  89 tagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgctctctcccc 187  Q
    ||||| ||| ||||| ||||| ||| ||||| |||  ||||||||||| || | |||||| |||||||||  ||||||||||||||||||||||||||||    
T  10868 tagaaattaggtcttgttcttgtgtaagcttgtaaactaatttcttgtaactcttttgtaacactttcatcttagtggattggagagctgctctctcccc 10769  T
Q  188 catagtaggtcatattggaccaaacttggttaccagtcttggagtgtttgtt 239  Q
    || | |||||||||||||||| |||| ||| |  | |||||| |||||||||    
T  10768 caaattaggtcatattggaccgaactgggtcaataatcttggtgtgtttgtt 10717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 81 - 207
Target Start/End: Complemental strand, 85829 - 85703
Alignment:
Q  81 aaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgct 179  Q
    ||||||||||||| ||| |||||  |||| ||| |||||||||| ||||||||||| || | |||||| ||||||||| || |||||||||||||| |||    
T  85829 aaaatgggtagaaattaggtcttgctcttgtgtaagcttttaagctaatttcttgtaactc-tttgtaacactttcatcatggtggattggagagccgct 85731  T
Q  180 ctctcccccatagtaggtcatattggac 207  Q
    |||||||||| | |||||||||||||||    
T  85730 ctctcccccagattaggtcatattggac 85703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 43 - 213
Target Start/End: Complemental strand, 17446 - 17277
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccc 141  Q
    |||||||||||||||||||  |||||||  ||||  | ||||| ||||||| ||| ||||| ||||| ||| ||||| |||| ||||||||||| || |     
T  17446 ttttctcttaggattcattaagagtgtgagtgac--acaaaataggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactct 17349  T
Q  142 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    |||||| ||||||||| ||| |||||||||| | ||||||||  |||||| |||||||||||| ||| ||||    
T  17348 tttgtaacactttcatcataatggattggagggttgctctctttcccatattaggtcatattgaaccgaact 17277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 53; Significance: 2e-21; HSPs: 3)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 141 - 213
Target Start/End: Original strand, 8430 - 8502
Alignment:
Q  141 ctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||| ||||    
T  8430 ctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaact 8502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 22339 - 22393
Alignment:
Q  159 atagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||| |||| |||||||||||||||| | ||||||| |||||||| ||||    
T  22339 atagtggatcggagggctgctctctcccccagactaggtcagattggaccgaact 22393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 24614 - 24668
Alignment:
Q  159 atagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||| |||| |||||||||||||||| | ||||||| |||||||| ||||    
T  24614 atagtggatcggagggctgctctctcccccagactaggtcagattggaccgaact 24668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 43 - 211
Target Start/End: Complemental strand, 14868 - 14699
Alignment:
Q  43 ttttctcttaggattca--ttgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttaccc 140  Q
    |||||||||||||||||  |||||||||||| |||||| |||||| ||||| |  || |  |  ||||||||||||||||||| |||||||| || |||     
T  14868 ttttctcttaggattcactttgtgagtgtgggtgacttgaaaaataggtaggaactagggttagttctttgtgagcttttaagctaatttctcgtaacct 14769  T
Q  141 ctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaa 211  Q
    |||||||||||| | || ||| | ||| |||| | ||||||||| ||||||||| ||||| ||||||||||    
T  14768 ctttgtatcactcttatcataattgatcggag-gttgctctctctcccatagtatgtcattttggaccaaa 14699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 213
Target Start/End: Original strand, 43972 - 44044
Alignment:
Q  141 ctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||| | ||| |||||||||||| ||||    
T  43972 ctttgtaacactttcatcatagtggattggagagctgctctctcccccagaatagatcatattggaccgaact 44044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 141 - 213
Target Start/End: Original strand, 36843 - 36915
Alignment:
Q  141 ctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||| ||||||||| ||||||| |||| |||||||||||| ||| | | |||||||||||||||| ||||    
T  36843 ctttgtaacactttcatcatagtgggttggcgagctgctctcttccctagattaggtcatattggaccgaact 36915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 139 - 205
Target Start/End: Original strand, 17961 - 18027
Alignment:
Q  139 ccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||| | |||| ||||||||    
T  17961 ccctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggccatattgg 18027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 139 - 205
Target Start/End: Original strand, 24054 - 24120
Alignment:
Q  139 ccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||| | |||| ||||||||    
T  24054 ccctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggccatattgg 24120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 43 - 152
Target Start/End: Original strand, 102407 - 102516
Alignment:
Q  43 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccct 142  Q
    ||||||||| | ||| ||| ||||||||  |||||| |||||||||||||| ||| |  || || |||||||||||||||| ||||||||||| ||| ||    
T  102407 ttttctcttcgaatttattatgagtgtgtgtgacttgaaaaatgggtagaaattagggtttgttttttgtgagcttttaagataatttcttgtaacctct 102506  T
Q  143 ttgtatcact 152  Q
    ||||||||||    
T  102507 ttgtatcact 102516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 151 - 213
Target Start/End: Complemental strand, 45329 - 45267
Alignment:
Q  151 ctttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||| ||||||||||||||||||||||||||||||| | |||||||||||| ||| ||||    
T  45329 ctttcatcatagtggattggagagctgctctctcccccagattaggtcatattgaaccgaact 45267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1050 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1050
Description:

Target: scaffold1050; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 200
Target Start/End: Complemental strand, 3141 - 3094
Alignment:
Q  153 ttcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    ||||||||||||||| ||||||||||||||||||||| | ||||||||    
T  3141 ttcattatagtggatcggagagctgctctctcccccagactaggtcat 3094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 213
Target Start/End: Original strand, 264 - 319
Alignment:
Q  158 tatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||||||||| |||||||||||||||| | ||||||| |||||||| ||||    
T  264 tatagtggattggagggctgctctctcccccagactaggtcagattggaccgaact 319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 154 - 200
Target Start/End: Complemental strand, 17056 - 17010
Alignment:
Q  154 tcattatagtggattggagagctgctctctcccccatagtaggtcat 200  Q
    |||||||||||||| ||||||||||||||||||||| | ||||||||    
T  17056 tcattatagtggatcggagagctgctctctcccccagactaggtcat 17010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 11538 - 11488
Alignment:
Q  158 tatagtggattggagagctgctctctcccccatagtaggtcatattggacc 208  Q
    |||||||||||||||||||||||||||||||| | |||||||  |||||||    
T  11538 tatagtggattggagagctgctctctcccccagactaggtcaatttggacc 11488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 205
Target Start/End: Original strand, 9643 - 9705
Alignment:
Q  142 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    |||||| ||||||| | ||| ||||||||||||||||||||||||||| | |||| ||||||||    
T  9643 tttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 9705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 205
Target Start/End: Original strand, 35063 - 35125
Alignment:
Q  142 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    |||||| ||||||| | ||| ||||||||||||||||||||||||||| | |||| ||||||||    
T  35063 tttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 35125  T

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Target: scaffold0025 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 213
Target Start/End: Complemental strand, 69357 - 69302
Alignment:
Q  158 tatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    |||||||||| ||||||||||||||||||||| | |||||||  ||||||| ||||    
T  69357 tatagtggatcggagagctgctctctcccccagactaggtcaatttggaccgaact 69302  T

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Target: scaffold0472 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 6423 - 6477
Alignment:
Q  159 atagtggattggagagctgctctctcccccatagtaggtcatattggaccaaact 213  Q
    ||||||||| |||| |||||||||||||||| | ||||||| |||||||| ||||    
T  6423 atagtggatcggagggctgctctctcccccagactaggtcagattggaccgaact 6477  T

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Target: scaffold0464 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 205
Target Start/End: Complemental strand, 427 - 385
Alignment:
Q  163 tggattggagagctgctctctcccccatagtaggtcatattgg 205  Q
    ||||||||||||||||||||||||||| | |||| ||||||||    
T  427 tggattggagagctgctctctcccccagattaggccatattgg 385  T

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Target: scaffold0184 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 207
Target Start/End: Original strand, 29506 - 29570
Alignment:
Q  143 ttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggac 207  Q
    |||||||||||||||  ||||||||| ||||  || ||||||| | | |||||||||||||||||    
T  29506 ttgtatcactttcatcttagtggattagagaattgttctctcctctagagtaggtcatattggac 29570  T

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Target: scaffold0076 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 213
Target Start/End: Original strand, 15963 - 16071
Alignment:
Q  105 ttctttgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattg 204  Q
    ||||||||| | ||||||| ||||||||||| ||  |||||||| ||| | || |||||||||| ||| | || ||||| | ||||||||| | || |||    
T  15963 ttctttgtgggtttttaagctaatttcttgtaacatctttgtataactcttatcatagtggattagagtgttgttctcttctccatagtagattattttg 16062  T
Q  205 gaccaaact 213  Q
    |||| ||||    
T  16063 gaccgaact 16071  T

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