View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7805_high_3 (Length: 402)
Name: NF7805_high_3
Description: NF7805
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7805_high_3 |
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Alignment Details
Target: chr2 (Bit Score: 338; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 338; E-Value: 0
Query Start/End: Original strand, 15 - 384
Target Start/End: Original strand, 7080733 - 7081102
Alignment:
| Q |
15 |
aatattcatcatacataggaaccaaccacattgtgctatgtcaccacccctgaaacatttcaactaaattccaagtcactcttgttagcttatgctctca |
114 |
Q |
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| T |
7080733 |
aatattcatcatacataggaaccaaccacattgtgctatgtcaccacccctgaaatatttcaactaaattctaagtcactcttgttagcttatgctctca |
7080832 |
T |
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| Q |
115 |
aatttttgaccttgattccctaacatcggagaatcttgcagttatacaaatcaagacggtccaaatttaaagctcgataaataaaaagatacgttgtaaa |
214 |
Q |
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| T |
7080833 |
aatttttgacattgattccctaacatcggagaatcttgcacttatacaaatcaagacggtccaaatttaaagcttgataaataaaaagatacgttgtaaa |
7080932 |
T |
|
| Q |
215 |
tctcgatcaaaatcagatgatcgagattttcatgcattgactactttgaagcatttttccgacgacttgggctaaacgtttgaaacacaacactacctat |
314 |
Q |
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| T |
7080933 |
tcttgatcaaaatcagatgatcgagattttcatgcattgactactttgaagcatttttccgacgacgtggggtaaacgtttgaaacacaacactacctat |
7081032 |
T |
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| Q |
315 |
tgcaggaaactgatccatagcacaactcctacatttcaacccaagaggctccaatgcaccagtaaccttt |
384 |
Q |
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| T |
7081033 |
tgcaggaaactgatccatagcacaactcctacatttcaacccaagaggctccaatgcaccagtaaccttt |
7081102 |
T |
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