View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7805_high_4 (Length: 385)
Name: NF7805_high_4
Description: NF7805
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7805_high_4 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 129; Significance: 1e-66; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 234 - 385
Target Start/End: Original strand, 34432133 - 34432282
Alignment:
| Q |
234 |
cagtctccgttcgatacattttctggatccattccagtgtgggtgttctttcattctaaccaactccaaaaatattcaccttgattgaaaatgatacata |
333 |
Q |
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| T |
34432133 |
cagtctccgttcgatacattttctggatccattccagtgtgggtgttctttcattctaaccaactccaaaaatatccaccttaattgaaaatgatacata |
34432232 |
T |
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| Q |
334 |
ttatgctttaattgtatacaccaacaatattaatagttcaaaagaactatca |
385 |
Q |
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|||| | |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34432233 |
ttatac--taattgtatacaccaacaatattaatagttcaaaagaactatca |
34432282 |
T |
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