View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7805_low_11 (Length: 248)
Name: NF7805_low_11
Description: NF7805
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7805_low_11 |
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Alignment Details
Target: chr6 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 28740289 - 28740519
Alignment:
| Q |
1 |
ctcactcttggggaaaatttgtaaacaaatggatgattaaggaaatagtttaataattttggagtcatacttaattggaattaaattggcccnnnnnnna |
100 |
Q |
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| T |
28740289 |
ctcactcttgggggaaatttgtaaacaaatggatgattaaggaaatagtttaataattttggagtcatacttaattggaattaaattggcccttttttta |
28740388 |
T |
|
| Q |
101 |
agtttgttctaatcttctaattgcaaataattgcatcctttgaacatgtggtgcattatttttgcacatactgatttcagccactatctaataataataa |
200 |
Q |
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|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
28740389 |
agtttgttctaaacttctaattgcaaataattgcatcctttgaacatgtggtgcattatttttccacatactgatttcagccactatctaataataataa |
28740488 |
T |
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| Q |
201 |
aataaatgtggggcccaataagatgggatgt |
231 |
Q |
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| T |
28740489 |
aataaatgtggggcccaataagatgggatgt |
28740519 |
T |
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