View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7806_high_11 (Length: 324)
Name: NF7806_high_11
Description: NF7806
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7806_high_11 |
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Alignment Details
Target: chr1 (Bit Score: 277; Significance: 1e-155; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 9 - 305
Target Start/End: Complemental strand, 7410485 - 7410189
Alignment:
| Q |
9 |
cacacacgcacacacagtggtcctaaaataaacaatgccagtcacaggacactttactgcacctatagctgtagaaattgcatgtgagttgtgcaaatga |
108 |
Q |
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| T |
7410485 |
cacacacacacacacagtggtcctaaaataaacaaagccagtcacaggacactttactgcacctatagctgtagaaattgcatgtgagttgtgcaaatga |
7410386 |
T |
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| Q |
109 |
gagagacgtaattagtttcttctgcataaacaattattagtacctatttttacagcttttaatatgcataactcgccgatatatagttttattttacaat |
208 |
Q |
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||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7410385 |
gagagacataattagtttcttctgcataaacaattattagtacctatttttacagcttttaatatgcataactcgccgatatatagttttattttacaat |
7410286 |
T |
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| Q |
209 |
taaaatgtaaagagatatgaagagagagatctagataaggaggtaagtggtagaatcactttttaaggtagcattagtggccttttatgctggattt |
305 |
Q |
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||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7410285 |
taaaatgtaaagagataagaagagagagatctagataaggaggtaagtggtggaatcactttttaaggtagcattagtggccttttatgctggattt |
7410189 |
T |
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