View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF7806_low_1 (Length: 719)
Name: NF7806_low_1
Description: NF7806
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7806_low_1 |
 | |
|
Alignment Details
Target: chr1 (Bit Score: 343; Significance: 0; HSPs: 7)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 343; E-Value: 0
Query Start/End: Original strand, 16 - 421
Target Start/End: Original strand, 8141810 - 8142208
Alignment:
| Q |
16 |
aatatagtacctaaaacctatcttggtagaatcagaagcagagtttgaggacattgattccgatgattcaattgaagaagttgaaggatatgcctcacta |
115 |
Q |
| |
|
||||||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
8141810 |
aatatagtaccaaaaatctatcttggtggaatcagaagcagagtttgaggacattgattccgatgattcaattgaagaagttgaaggatatgcctcatta |
8141909 |
T |
|
| Q |
116 |
tctgaaaatgaggataatattatgttggagaagaggagaataattagatcttttatcaccgattagaacttaaaactaccaattatttagattttttgag |
215 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
8141910 |
tctgaaaatgaggataatattatgttggagaagag---aataattagatcttttatcaccgattaaaacttaaaactaccaattatttagattttttgag |
8142006 |
T |
|
| Q |
216 |
ttttaagtcacttttaatttctgttaatggctttctgcaataatttatgcatatatcatgctttactagttgtttaactattgagattttttgttttata |
315 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
8142007 |
ttttaagtcacttttaatttctgttaatggctttctgcaataatttatgcat----catgctttactagttgtttaactatggagattttttgttttata |
8142102 |
T |
|
| Q |
316 |
tgaagtcattttaaatttctgtttatgtaacttctatttgtgtgttagcatgctttattttatacataattatttatttgaacagttttgcagtttccgc |
415 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8142103 |
tgaagtcattttaaatttctgtttatgtaacttctatttgtgtgttcgcatgctttattttatacataattatttatttgaacagttttgcagtttccgc |
8142202 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 411 - 698
Target Start/End: Original strand, 8142221 - 8142506
Alignment:
| Q |
411 |
tccgctatttgtcatattggattttt-ggcaatccaatattttccacgatccgatattaatcgataggaattacatatcaagaatagatgaagtacaatc |
509 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8142221 |
tccgctatttgtcatattggattttttggcaatccaatattttccacgatccgatattaatagataggaattacatatcaagaatagatgaagtacaatc |
8142320 |
T |
|
| Q |
510 |
ttcaagccatacatagtcactgtgagttaaggtattatgattggctaagaagtgtgcctcatttatttatattcattttgcatcaaatcgacacaagact |
609 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8142321 |
ttcaagccatacatagtcactgtgagttaaggtat---gattggctaagaagtgtgcctcatttatttatattcattttgcatcaaatcgacacaagact |
8142417 |
T |
|
| Q |
610 |
ctggcccatccttcatctcataatcccttccccaattcatattagctgctttggaggctatgacaaatctgttacttgaatctataggc |
698 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
8142418 |
ctggcccatccttcatctcataatcccttccccaattcatattagctgctttggaggctatgacaaatctgtaacttgaatctataggc |
8142506 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 478 - 699
Target Start/End: Complemental strand, 7501177 - 7500959
Alignment:
| Q |
478 |
aattacatatcaagaatagatgaagtacaatcttcaagccatacatagtcactgtgagttaaggtattatgattggctaagaagtgtgcctcatttattt |
577 |
Q |
| |
|
|||||||| ||||||||| |||||||||| ||||||||||||||||||||| |||||||||||| || | |||||||||| |||||||||||||||| |
|
|
| T |
7501177 |
aattacatgtcaagaatacatgaagtacattcttcaagccatacatagtcattgtgagttaaggcat---gcttggctaagatatgtgcctcatttattt |
7501081 |
T |
|
| Q |
578 |
atattcattttgcatcaaatcgacacaagactctggcccatccttcatctcataatcccttccccaattcatattagctgctttggaggctatgacaaat |
677 |
Q |
| |
|
|||| |||||||||||||||| ||||| ||||||| | ||||||| | ||||||||||||||||||| ||||| ||| ||||| ||||||| ||||| |
|
|
| T |
7501080 |
gtattaattttgcatcaaatcgtcacaattctctggctcttccttcacttgataatcccttccccaattcgtattatctgttttgggggctatggcaaat |
7500981 |
T |
|
| Q |
678 |
ctgttacttgaatctataggct |
699 |
Q |
| |
|
|||| |||||||| |||||||| |
|
|
| T |
7500980 |
ctgtaacttgaatttataggct |
7500959 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 571 - 697
Target Start/End: Complemental strand, 7498299 - 7498173
Alignment:
| Q |
571 |
tttatttatattcattttgcatcaaatcgacacaagactctggcccatccttcatctcataatcccttccccaattcatattagctgctttggaggctat |
670 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||| ||||||| ||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
7498299 |
tttatttatattcattttgcatcaaatcgtcacaagtctctggctcatccttcacctcataatctcttccccaattcatatttgctgctttggaggctat |
7498200 |
T |
|
| Q |
671 |
gacaaatctgttacttgaatctatagg |
697 |
Q |
| |
|
||||||||||| |||| |||||||||| |
|
|
| T |
7498199 |
gacaaatctgtaactttaatctatagg |
7498173 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 324 - 420
Target Start/End: Complemental strand, 4931749 - 4931654
Alignment:
| Q |
324 |
ttttaaatttctgtttatgtaacttctatttgtgtgttagcatgctttattttatacataattatttatttgaacagttttgcagtttccgctattt |
420 |
Q |
| |
|
||||||||||||| ||||||| || |||||||||| | |||||||||||||||| |||||||||||||| ||||| | ||||| |||| |||||| |
|
|
| T |
4931749 |
ttttaaatttctggttatgtagtttttatttgtgtgcaa-catgctttattttatatataattatttatttcaacaggtgtgcagcttccactattt |
4931654 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 270 - 354
Target Start/End: Original strand, 18375038 - 18375123
Alignment:
| Q |
270 |
atcatgctttactagttgttt-aactattgagattttttgttttatatgaagtcattttaaatttctgtttatgtaacttctattt |
354 |
Q |
| |
|
||||||||||| | |||||| ||||||||||||||| ||||||| | |||||||||| |||||||||||||||| ||| ||||| |
|
|
| T |
18375038 |
atcatgctttatcatttgtttgaactattgagattttgagttttatgtcaagtcatttttaatttctgtttatgtagcttttattt |
18375123 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 478 - 541
Target Start/End: Complemental strand, 7498560 - 7498499
Alignment:
| Q |
478 |
aattacatatcaagaatagatgaagtacaatcttcaagccatacatagtcactgtgagttaagg |
541 |
Q |
| |
|
|||||||||||||||||| ||| |||| |||||| |||||||||||||||| |||||||||| |
|
|
| T |
7498560 |
aattacatatcaagaataaatgtagtat--tcttcatgccatacatagtcactttgagttaagg |
7498499 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 100; Significance: 4e-49; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 36 - 202
Target Start/End: Complemental strand, 22210273 - 22210106
Alignment:
| Q |
36 |
tcttggtagaatcagaagcagagtttgaggacattgattccgatgattcaattgaagaagttgaaggatatgcctcactatctgaaaatgaggataat-a |
134 |
Q |
| |
|
|||| |||||||| |||| |||||||||||| ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| | |
|
|
| T |
22210273 |
tcttagtagaatcggaagtagagtttgaggatattgatttagatgattcaatagaagaagttgaaggatgtgcctcactatctgaaaatgaggataatga |
22210174 |
T |
|
| Q |
135 |
ttatgttggagaagaggagaataattagatcttttatcaccgattagaacttaaaactaccaattatt |
202 |
Q |
| |
|
||||||||| |||||||||||||| || |||||||||||| |||||||||| |||||||||||||| |
|
|
| T |
22210173 |
ttatgttggggaagaggagaataactatatcttttatcactagttagaacttagaactaccaattatt |
22210106 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 65 - 169
Target Start/End: Original strand, 5351790 - 5351895
Alignment:
| Q |
65 |
gacattgattccgatgattcaattgaagaagttgaaggatatgcctcactatctgaaaatgaggataat-attatgttggagaagaggagaataattaga |
163 |
Q |
| |
|
||||||||||| || |||||| |||||||||||||||||||||||||||||| || ||||| ||||||| |||||||||| |||||||||||||||| || |
|
|
| T |
5351790 |
gacattgattctgaggattcagttgaagaagttgaaggatatgcctcactatgtggaaatggggataatgattatgttggggaagaggagaataattgga |
5351889 |
T |
|
| Q |
164 |
tctttt |
169 |
Q |
| |
|
|||||| |
|
|
| T |
5351890 |
tctttt |
5351895 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 411 - 468
Target Start/End: Complemental strand, 22209859 - 22209802
Alignment:
| Q |
411 |
tccgctatttgtcatattggatttttggcaatccaatattttccacgatccgatatta |
468 |
Q |
| |
|
||||||||||||||||| ||||||||||| |||||||||||||| |||| ||||||| |
|
|
| T |
22209859 |
tccgctatttgtcatatcggatttttggcgatccaatattttccgtgatcagatatta |
22209802 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 93; Significance: 7e-45; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 36 - 171
Target Start/End: Original strand, 9130594 - 9130730
Alignment:
| Q |
36 |
tcttggtagaatcagaagcagagtttgaggacattgattccgatgattcaattgaagaagttgaaggatatgcctcactatctgaaaatgaggataa-ta |
134 |
Q |
| |
|
|||||||||||||||||||||||||| |||| |||||||| || ||||||||||||||||||| ||| ||||||||||||||||||||||||| || || |
|
|
| T |
9130594 |
tcttggtagaatcagaagcagagtttaaggaaattgattcagacaattcaattgaagaagttgacggaaatgcctcactatctgaaaatgaggacaatta |
9130693 |
T |
|
| Q |
135 |
ttatgttggagaagaggagaataattagatcttttat |
171 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
9130694 |
ttatgttggggaagaggagaataattagatcttttat |
9130730 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 220 - 470
Target Start/End: Original strand, 9130812 - 9131066
Alignment:
| Q |
220 |
aagtcacttttaatttctgttaatggctttctgcaataatttatgcatatat----catgctttactagttgttt-aactattgagattttttgttttat |
314 |
Q |
| |
|
||||||||||||||||||| | |||||||||||||||||| | |||| ||| || | | |||||||||||| ||||||||||||||| ||| ||| |
|
|
| T |
9130812 |
aagtcacttttaatttctgcttatggctttctgcaataatgtgtgcaactatgcaccaggttctactagttgtttgaactattgagattttaagttgtat |
9130911 |
T |
|
| Q |
315 |
atgaagtcattttaaatttctgtttatgtaacttctatttgtgtgttagcatgctttattttatacataattatttatttgaacagttttgcagtttccg |
414 |
Q |
| |
|
|| || ||||||| ||||||||||| || ||| ||||||| ||| |||||||||||||||||| |||||||||||||||||| |||||| | || || |
|
|
| T |
9130912 |
atcaattcatttttaatttctgtttggttagcttttatttgtttgt-agcatgctttattttatatataattatttatttgaaccgttttgtggcttacg |
9131010 |
T |
|
| Q |
415 |
ctatttgtcatattggatttttggcaatccaatattttccacgatccgatattaat |
470 |
Q |
| |
|
|||| | |||||| | ||||||||| ||| ||||||||| |||| |||||||||| |
|
|
| T |
9131011 |
ctatgtatcatatcgaatttttggcgatctgatattttccgcgatacgatattaat |
9131066 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 86 - 169
Target Start/End: Complemental strand, 31037381 - 31037298
Alignment:
| Q |
86 |
attgaagaagttgaaggatatgcctcactatctgaaaatgaggataat-attatgttggagaagaggagaataattagatctttt |
169 |
Q |
| |
|
|||||| ||||||||||||||||||||| |||| | ||| ||||||| |||||| ||| ||||| |||||||| |||||||||| |
|
|
| T |
31037381 |
attgaaaaagttgaaggatatgcctcacgatct-agtatgtggataatgattatgctggggaagaagagaataaatagatctttt |
31037298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 59; Significance: 1e-24; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 80 - 169
Target Start/End: Complemental strand, 34730297 - 34730207
Alignment:
| Q |
80 |
gattcaattgaagaagttgaaggatatgcctcactatctgaaaatgaggataat-attatgttggagaagaggagaataattagatctttt |
169 |
Q |
| |
|
||||| ||| || ||||||||||||||||||||||||||||||||||||||||| || ||||| | ||||||||||||||||||||||||| |
|
|
| T |
34730297 |
gattccatttaaaaagttgaaggatatgcctcactatctgaaaatgaggataatgatgatgttagggaagaggagaataattagatctttt |
34730207 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 277 - 354
Target Start/End: Original strand, 1492102 - 1492180
Alignment:
| Q |
277 |
tttactagttgttt-aactattgagattttttgttttatatgaagtcattttaaatttctgtttatgtaacttctattt |
354 |
Q |
| |
|
|||||||||||||| ||||||||| ||||| ||||||||| |||||||||| |||||||||||| ||| ||| ||||| |
|
|
| T |
1492102 |
tttactagttgtttgaactattgaaattttgagttttatatcaagtcatttttaatttctgtttaggtagcttttattt |
1492180 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 412 - 460
Target Start/End: Original strand, 1530418 - 1530466
Alignment:
| Q |
412 |
ccgctatttgtcatattggatttttggcaatccaatattttccacgatc |
460 |
Q |
| |
|
||||||||||| |||||||||||||||| |||| ||| ||||||||||| |
|
|
| T |
1530418 |
ccgctatttgttatattggatttttggcgatccgatactttccacgatc |
1530466 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 411 - 461
Target Start/End: Original strand, 1492294 - 1492344
Alignment:
| Q |
411 |
tccgctatttgtcatattggatttttggcaatccaatattttccacgatcc |
461 |
Q |
| |
|
|||||||||||| |||| ||||||||||| |||| ||||||||| |||||| |
|
|
| T |
1492294 |
tccgctatttgttatatcggatttttggcgatcctatattttccgcgatcc |
1492344 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 84 - 169
Target Start/End: Complemental strand, 17907241 - 17907155
Alignment:
| Q |
84 |
caattgaagaagttgaaggatatgcctcactatctgaaaatgaggataa-tattatgttggagaagaggagaataattagatctttt |
169 |
Q |
| |
|
||||| ||||||||||| ||||||||||||||||||||||||| ||||| ||||||||| | |||||||||| |||||||||||||| |
|
|
| T |
17907241 |
caatttaagaagttgaacgatatgcctcactatctgaaaatgaagataattattatgtttgggaagaggagagtaattagatctttt |
17907155 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 55; Significance: 3e-22; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 92 - 169
Target Start/End: Complemental strand, 34786131 - 34786053
Alignment:
| Q |
92 |
gaagttgaaggatatgcctcactatctgaaaatgaggataat-attatgttggagaagaggagaataattagatctttt |
169 |
Q |
| |
|
|||||||||||| |||||| |||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |
|
|
| T |
34786131 |
gaagttgaaggagatgcctaactaactgaaaatgaggataatgattatgttggggaagaggagaataattagatctttt |
34786053 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 65 - 169
Target Start/End: Original strand, 20166768 - 20166873
Alignment:
| Q |
65 |
gacattgattccgatgattcaattgaagaagttgaaggatatgcctcactatctgaaaatgaggataat-attatgttggagaagaggagaataattaga |
163 |
Q |
| |
|
||||||||||| || ||||| ||| |||||||||||||||||||||||||||| |||||||||||||| |||||||| | || |||| |||||||||| |
|
|
| T |
20166768 |
gacattgattctgaggattctatttaagaagttgaaggatatgcctcactatcgcaaaatgaggataatgattatgttaggaaataggaaaataattaga |
20166867 |
T |
|
| Q |
164 |
tctttt |
169 |
Q |
| |
|
|||||| |
|
|
| T |
20166868 |
tctttt |
20166873 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 65 - 169
Target Start/End: Complemental strand, 47652434 - 47652330
Alignment:
| Q |
65 |
gacattgattccgatgattcaattgaagaagttgaaggatatgcctcactatctgaaaatgaggataa-tattatgttggagaagaggagaataattaga |
163 |
Q |
| |
|
|||||||||| | | |||||| || ||||||||||||||||||||||||||||| ||||||| ||||| ||||||||| ||||||||||||| ||||| |
|
|
| T |
47652434 |
gacattgattacaaggattcattt-aagaagttgaaggatatgcctcactatctaaaaatgaagataacgattatgttgtggaagaggagaatagttaga |
47652336 |
T |
|
| Q |
164 |
tctttt |
169 |
Q |
| |
|
|||||| |
|
|
| T |
47652335 |
tctttt |
47652330 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 411 - 470
Target Start/End: Complemental strand, 54256646 - 54256587
Alignment:
| Q |
411 |
tccgctatttgtcatattggatttttggcaatccaatattttccacgatccgatattaat |
470 |
Q |
| |
|
|||||||||| ||||| |||||||||| |||| ||||||||||||||||| ||||||| |
|
|
| T |
54256646 |
tccgctatttctcatagcagatttttggcgatccgatattttccacgatccgctattaat |
54256587 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 209 - 255
Target Start/End: Complemental strand, 47954028 - 47953982
Alignment:
| Q |
209 |
ttttgagttttaagtcacttttaatttctgttaatggctttctgcaa |
255 |
Q |
| |
|
||||||||||||||||| ||||||||| |||| ||||||||||||| |
|
|
| T |
47954028 |
ttttgagttttaagtcatttttaatttatgtttctggctttctgcaa |
47953982 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 36 - 174
Target Start/End: Complemental strand, 490991 - 490848
Alignment:
| Q |
36 |
tcttggtagaatcagaagcagagtttgaggacattgattccgatgattcaattgaagaagttgaaggatatgcctcactatctgaa---aatgaggataa |
132 |
Q |
| |
|
|||||||| ||||| |||||||||| ||||| |||||||| | ||||||||||||| ||||||| ||||||| ||| | ||||| || |||||||| |
|
|
| T |
490991 |
tcttggtataatcaaaagcagagttagaggatattgattcaggtgattcaattgaaaaagttgacagatatgcttcaaaacctgaaaacaacgaggataa |
490892 |
T |
|
| Q |
133 |
t-attatgtt-ggagaagaggagaataattagatcttttatcac |
174 |
Q |
| |
|
| |||||||| || ||||||||| |||||||||||||||||||| |
|
|
| T |
490891 |
tgattatgttgggggaagaggagcataattagatcttttatcac |
490848 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University