View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7806_low_15 (Length: 290)

Name: NF7806_low_15
Description: NF7806
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7806_low_15
NF7806_low_15
[»] chr3 (25 HSPs)
chr3 (1-282)||(2659246-2659527)
chr3 (68-270)||(2644468-2644673)
chr3 (2-265)||(2491753-2492022)
chr3 (68-175)||(7324632-7324739)
chr3 (1-267)||(2501827-2502090)
chr3 (68-175)||(2476374-2476481)
chr3 (1-175)||(747354-747528)
chr3 (2-109)||(7443271-7443378)
chr3 (13-243)||(9562112-9562342)
chr3 (1-109)||(679502-679610)
chr3 (2-100)||(7334560-7334658)
chr3 (72-180)||(9594841-9594949)
chr3 (2-123)||(2474776-2474898)
chr3 (68-116)||(9566098-9566146)
chr3 (189-231)||(763706-763748)
chr3 (189-231)||(9585280-9585322)
chr3 (194-231)||(1437868-1437905)
chr3 (201-254)||(2635594-2635647)
chr3 (72-123)||(768615-768666)
chr3 (185-227)||(783948-783990)
chr3 (194-244)||(7443121-7443171)
chr3 (188-225)||(754760-754797)
chr3 (1-41)||(2644700-2644740)
chr3 (68-104)||(9608643-9608679)
chr3 (191-231)||(13526471-13526511)
[»] chr2 (4 HSPs)
chr2 (186-248)||(33020177-33020239)
chr2 (186-231)||(33026518-33026563)
chr2 (70-175)||(33037881-33037986)
chr2 (187-231)||(33038016-33038060)
[»] chr5 (1 HSPs)
chr5 (67-108)||(20292716-20292757)
[»] chr7 (1 HSPs)
chr7 (7-47)||(1421551-1421591)
[»] chr1 (1 HSPs)
chr1 (187-231)||(51829632-51829676)


Alignment Details
Target: chr3 (Bit Score: 254; Significance: 1e-141; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 1 - 282
Target Start/End: Complemental strand, 2659527 - 2659246
Alignment:
Q  1 ctaagctttggatatgatcattttattgataattataaggttgttgcccattctttcaaaaaagtgattagtgttaatactttggggactgattattgga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2659527 ctaagctttggatatgatcattttattgataattataaggttgttgcccattctttcaaaaaagtgattagtgttaatactttggggactgattattgga 2659428  T
Q  101 gaagaatagcggacattccatattctaaccccatttgtggacatggactatttgttagtggcactgttaattggtgtgcatatgatgtcattatttctct 200  Q
    ||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  2659427 gaagaataaaggacattccatattctaaccccatttctggacatggactatttgttagtggcactgttaattggtttgcatatgatgtcattatatctct 2659328  T
Q  201 tgatttagagaaggagtcgtatcaaaagcttcggctacctgatttcgacaatgaaaataattcgtgggacgtgtgtgcggtg 282  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  2659327 tgatttagagaaggagtcgtatcaaaagcttcggctacctgatttcgacaatgaaaataattcgtgggacgtgggtgtggtg 2659246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 68 - 270
Target Start/End: Complemental strand, 2644673 - 2644468
Alignment:
Q  68 ttagtgttaatactttggggactgattattggagaagaatagcggacattccatattctaaccccatttgt---ggacatggactatttgttagtggcac 164  Q
    |||| |||||||||||||||||||||||||||| |||||||  |||||||||||||||| |||||||||||   ||| ||||| ||||||||||||||||    
T  2644673 ttagggttaatactttggggactgattattggacaagaatacaggacattccatattctgaccccatttgttttggagatggagtatttgttagtggcac 2644574  T
Q  165 tgttaattggtgtgcatatgatgtcattatttctcttgatttagagaaggagtcgtatcaaaagcttcggctacctgatttcgacaatgaaaataattcg 264  Q
    | ||||||||| |||||| || ||||||||||||||| |||||||||| |||||||||||||| ||| | | |||||| ||||   ||||||||||| ||    
T  2644573 tcttaattggtttgcatacgaagtcattatttctcttcatttagagaacgagtcgtatcaaaaactttgcccacctgacttcggggatgaaaataatccg 2644474  T
Q  265 tgggac 270  Q
    ||||||    
T  2644473 tgggac 2644468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 265
Target Start/End: Original strand, 2491753 - 2492022
Alignment:
Q  2 taagctttggatatgatcattttattgataattataaggttgttgcccattctttcaaaaaagtgattagtgttaatactttggggactgattattggag 101  Q
    |||||||||| ||||||||||| |||||| ||||||||||  |||    ||||| | |||| |   |||||||| ||||||||||||||||||||||||     
T  2491753 taagctttgggtatgatcatttcattgatgattataaggtcattggtgtttcttccgaaaatgaagttagtgtttatactttggggactgattattggac 2491852  T
Q  102 aagaatagcggacattccatattctaaccccatttgtggacatggactatttgttagtggcactgttaattggtgtgcatatgatg--tc----attatt 195  Q
    ||||||   |||||| ||||||||| ||||||||| |||| | ||| |||| ||||||||||||||||||||||  |||| |||||  ||    ||| ||    
T  2491853 aagaatcaaggacatcccatattctgaccccatttatggaaacggagtattcgttagtggcactgttaattggttagcatgtgatgattcatgtattctt 2491952  T
Q  196 tctcttgatttagagaaggagtcgtatcaaaagcttcggctacctgatttcgacaatgaaaataattcgt 265  Q
    ||||||||||||||||||||||| |||||| | |||   ||||||||||| || ||||| ||| ||||||    
T  2491953 tctcttgatttagagaaggagtcatatcaacaacttttcctacctgattttgagaatgagaatgattcgt 2492022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 68 - 175
Target Start/End: Complemental strand, 7324739 - 7324632
Alignment:
Q  68 ttagtgttaatactttggggactgattattggagaagaatagcggacattccatattctaaccccatttgtggacatggactatttgttagtggcactgt 167  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||| ||||||||| ||  |||||||||||| ||| ||||||| | |||||||||    
T  7324739 ttagtgttaatactttggggactgattattggacaagaatagaggacatcccatattctgacaacatttgtggacagggagtatttgtcaatggcactgt 7324640  T
Q  168 taattggt 175  Q
    ||||||||    
T  7324639 taattggt 7324632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 2501827 - 2502090
Alignment:
Q  1 ctaagctttggatatgatcattttattgataattataaggttgttgcccattctttcaaaaaagtgattagtgttaatactttggggactgattattgga 100  Q
    ||||||||||||||||||||||| |||||||||||||||||  |||    ||||  | |||| |   |||| ||||||||||||||||||||||||||||    
T  2501827 ctaagctttggatatgatcatttcattgataattataaggtcattgttgtttctgacgaaaatgaagttagggttaatactttggggactgattattgga 2501926  T
Q  101 gaagaatagcggacattccatattctaaccccatttgtggacatggactatttgttagtggcactgttaattggtgtgcatatgatgtcattatttctct 200  Q
    |||  |||| |||||| |   ||| | || |||  | ||| |  ||  |||||||  |||||||||||||||||  | |||  |||||||||||||||||    
T  2501927 gaaagatagaggacatcc---attgttacaccaagtatggcccggggatatttgtgtgtggcactgttaattgggtttcatgggatgtcattatttctct 2502023  T
Q  201 tgatttagagaaggagtcgtatcaaaagcttcggctacctgatttcgacaatgaaaataattcgtgg 267  Q
    |||||||||||||||||| | |||| ||||| | | |||||| || |  ||||||||||||| ||||    
T  2502024 tgatttagagaaggagtcatgtcaagagctttgcccacctgactttgggaatgaaaataattggtgg 2502090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 68 - 175
Target Start/End: Original strand, 2476374 - 2476481
Alignment:
Q  68 ttagtgttaatactttggggactgattattggagaagaatagcggacattccatattctaaccccatttgtggacatggactatttgttagtggcactgt 167  Q
    ||||||||||||||||||||||||||||||||| ||||||   |||||| ||||||||| ||  ||||||| |||  ||| ||||||| ||||||||| |    
T  2476374 ttagtgttaatactttggggactgattattggacaagaatgcaggacatcccatattcttacggcatttgtagacggggagtatttgtgagtggcactct 2476473  T
Q  168 taattggt 175  Q
    ||||||||    
T  2476474 taattggt 2476481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 747528 - 747354
Alignment:
Q  1 ctaagctttggatatgatcattttattgataattataaggttgttgcccattctttcaaaaaagtgattagtgttaatactttggggactgattattgga 100  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||    |||||   |||||| | ||  | |||||||||||||| ||||||||||||    
T  747528 ctaagctttggatatgatcatttcattgataattataaggtcgttgttgtttcttcagaaaaagaggttttttttaatactttgggggctgattattgga 747429  T
Q  101 gaagaatagcggacattccatattctaaccccatttgtggacatggactatttgttagtggcactgttaattggt 175  Q
     |||||||| || ||| ||| ||| | ||  ||| ||||||   ||| ||||||| |||| ||||||||||||||    
T  747428 aaagaatagagggcatcccacattattacgacatatgtggagtgggaatatttgtgagtgacactgttaattggt 747354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 109
Target Start/End: Complemental strand, 7443378 - 7443271
Alignment:
Q  2 taagctttggatatgatcattttattgataattataaggttgttgcccattctttcaaaaaagtgattagtgttaatactttggggactgattattggag 101  Q
    |||| ||||| ||||||||||| |||||||||||||| ||||||||   ||||| |||| | | | ||  ||||||| ||||||||||||||||||||||    
T  7443378 taagttttgggtatgatcatttcattgataattataaagttgttgctatttcttccaaatatgaggtttttgttaatgctttggggactgattattggag 7443279  T
Q  102 aagaatag 109  Q
    ||||||||    
T  7443278 aagaatag 7443271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 243
Target Start/End: Complemental strand, 9562342 - 9562112
Alignment:
Q  13 tatgatcattttattgataattataaggttgttgcccattctttcaaaaaagtgattagtgttaatactttggggactgattattggagaagaatagcgg 112  Q
    ||||||||||| |||||||||||||||||  |||    ||||  |||||| |   |||||||| ||||||||||||||||||||||||  ||||||| ||    
T  9562342 tatgatcatttcattgataattataaggtcattgttgtttctaccaaaaatgaagttagtgtttatactttggggactgattattggaagagaatagagg 9562243  T
Q  113 acattccatattctaaccccatttgtggacatggactatttgttagtggcactgttaattggtgtgcatatgatg--tca-ttatt---tctcttgattt 206  Q
    |||| |||||   |||   ||||| |||| | ||| ||||||| |||||||||||||||||||  |||  |||||  ||| |||||   ||||||||| |    
T  9562242 acatcccata---taa---catttttggagagggagtatttgtgagtggcactgttaattggttggcaagtgatgattcatttattctctctcttgatgt 9562149  T
Q  207 agagaaggagtcgtatcaaaagcttcggctacctgat 243  Q
    ||||||||||||||||||| || ||  ||||||||||    
T  9562148 agagaaggagtcgtatcaacaggttttgctacctgat 9562112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 679610 - 679502
Alignment:
Q  1 ctaagctttggatatgatcattttattgataattataaggttgttgcccattctttcaaaaaagtgattagtgttaatactttggggactgattattgga 100  Q
    ||||||||||||||||||||||| ||||||||  ||||||||||||    |||||   |||||| | || |||||||||||||||||  |||||||||||    
T  679610 ctaagctttggatatgatcatttcattgataaagataaggttgttgttgtttcttcagaaaaagaggtttgtgttaatactttgggggatgattattgga 679511  T
Q  101 gaagaatag 109  Q
     ||||||||    
T  679510 caagaatag 679502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 7334658 - 7334560
Alignment:
Q  2 taagctttggatatgatcattttattgataattataaggttgttgcccattctttcaaaaaagtgattagtgttaatactttggggactgattattgga 100  Q
    ||||||| |||||||||||||| ||||||||||||||||| |||||   |||| | ||||||    |||||||| |||||||||| |||||||||||||    
T  7334658 taagcttcggatatgatcatttcattgataattataaggtcgttgctgtttctgtaaaaaaaaaagttagtgtttatactttgggaactgattattgga 7334560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 72 - 180
Target Start/End: Complemental strand, 9594949 - 9594841
Alignment:
Q  72 tgttaatactttggggactgattattggagaagaatagcggacattccatattctaaccccatttgtggacatggactatttgttagtggcactgttaat 171  Q
    |||| |||||||||||||||||||||||| |||||||| |||||| ||| ||  | ||| ||| | |||||  ||| ||||||| ||||| |||||||||    
T  9594949 tgtttatactttggggactgattattggacaagaatagaggacatcccacatgattaccgcatatatggacgaggagtatttgtgagtggtactgttaat 9594850  T
Q  172 tggtgtgca 180  Q
    |||| ||||    
T  9594849 tggtatgca 9594841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 123
Target Start/End: Original strand, 2474776 - 2474898
Alignment:
Q  2 taagctttggatatgatcattttattgataattataaggttgttgcccattctttcaaaaaagtgattagtgttaatac-tttggggactgattattgga 100  Q
    |||||||||||||||||||||| ||||||||||| ||||   |||    ||||| |||||| |   ||||||||||||| |||  |||||||||||||||    
T  2474776 taagctttggatatgatcatttcattgataattacaaggccattgtattttcttccaaaaatgaagttagtgttaatacttttaaggactgattattgga 2474875  T
Q  101 gaagaatagcggacattccatat 123  Q
     |||||||| |||||| ||||||    
T  2474876 caagaatagaggacatcccatat 2474898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 68 - 116
Target Start/End: Complemental strand, 9566146 - 9566098
Alignment:
Q  68 ttagtgttaatactttggggactgattattggagaagaatagcggacat 116  Q
    |||||||| |||||||||||||||||||||||| |||||||| ||||||    
T  9566146 ttagtgtttatactttggggactgattattggacaagaatagaggacat 9566098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 231
Target Start/End: Complemental strand, 763748 - 763706
Alignment:
Q  189 cattatttctcttgatttagagaaggagtcgtatcaaaagctt 231  Q
    |||| ||||||||||||| ||||||||||||||||||||||||    
T  763748 cattgtttctcttgatttggagaaggagtcgtatcaaaagctt 763706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 231
Target Start/End: Complemental strand, 9585322 - 9585280
Alignment:
Q  189 cattatttctcttgatttagagaaggagtcgtatcaaaagctt 231  Q
    |||| ||||||||||||| ||||||||||||||||||||||||    
T  9585322 cattgtttctcttgatttggagaaggagtcgtatcaaaagctt 9585280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 231
Target Start/End: Original strand, 1437868 - 1437905
Alignment:
Q  194 tttctcttgatttagagaaggagtcgtatcaaaagctt 231  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  1437868 tttctcttgatttagagaaggagacgtatcaaaagctt 1437905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 2635594 - 2635647
Alignment:
Q  201 tgatttagagaaggagtcgtatcaaaagcttcggctacctgatttcgacaatga 254  Q
    ||||||||||||||||||||||| | | ||| |||||||||||||||| |||||    
T  2635594 tgatttagagaaggagtcgtatcgacaactttggctacctgatttcgagaatga 2635647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 72 - 123
Target Start/End: Complemental strand, 768666 - 768615
Alignment:
Q  72 tgttaatactttggggactgattattggagaagaatagcggacattccatat 123  Q
    |||| |||||||||| || ||||||||||||||||||| |||||| ||||||    
T  768666 tgtttatactttgggaacagattattggagaagaatagaggacatcccatat 768615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 227
Target Start/End: Complemental strand, 783990 - 783948
Alignment:
Q  185 atgtcattatttctcttgatttagagaaggagtcgtatcaaaa 227  Q
    |||||||| ||||||||||||| ||||| ||||||||||||||    
T  783990 atgtcattgtttctcttgatttggagaatgagtcgtatcaaaa 783948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 244
Target Start/End: Complemental strand, 7443171 - 7443121
Alignment:
Q  194 tttctcttgatttagagaaggagtcgtatcaaaagcttcggctacctgatt 244  Q
    |||||||||||||||| ||||||||||||||||| |||   ||||||||||    
T  7443171 tttctcttgatttagaaaaggagtcgtatcaaaaacttttcctacctgatt 7443121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 225
Target Start/End: Complemental strand, 754797 - 754760
Alignment:
Q  188 tcattatttctcttgatttagagaaggagtcgtatcaa 225  Q
    ||||| ||||||||||||||||||||||||| ||||||    
T  754797 tcattctttctcttgatttagagaaggagtcatatcaa 754760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 2644740 - 2644700
Alignment:
Q  1 ctaagctttggatatgatcattttattgataattataaggt 41  Q
    |||||||||||||||||||| ||  ||||||||||||||||    
T  2644740 ctaagctttggatatgatcacttcgttgataattataaggt 2644700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 104
Target Start/End: Complemental strand, 9608679 - 9608643
Alignment:
Q  68 ttagtgttaatactttggggactgattattggagaag 104  Q
    |||||||| |||||||||| |||||||||||||||||    
T  9608679 ttagtgttcatactttgggcactgattattggagaag 9608643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 231
Target Start/End: Original strand, 13526471 - 13526511
Alignment:
Q  191 ttatttctcttgatttagagaaggagtcgtatcaaaagctt 231  Q
    |||||||||||||||| || ||||| |||||||||||||||    
T  13526471 ttatttctcttgattttgaaaaggaatcgtatcaaaagctt 13526511  T

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Target: chr2 (Bit Score: 35; Significance: 0.0000000001; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 248
Target Start/End: Original strand, 33020177 - 33020239
Alignment:
Q  186 tgtcattatttctcttgatttagagaaggagtcgtatcaaaagcttcggctacctgatttcga 248  Q
    ||||||| ||||||||||||| ||||||||||||||||||| | ||  ||| |||||||||||    
T  33020177 tgtcattgtttctcttgatttggagaaggagtcgtatcaaacgtttttgctgcctgatttcga 33020239  T

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Target: chr2; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 231
Target Start/End: Original strand, 33026518 - 33026563
Alignment:
Q  186 tgtcattatttctcttgatttagagaaggagtcgtatcaaaagctt 231  Q
    ||||||| ||||||||||||| |||||||||| |||||||| ||||    
T  33026518 tgtcattgtttctcttgatttggagaaggagttgtatcaaacgctt 33026563  T

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Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 175
Target Start/End: Original strand, 33037881 - 33037986
Alignment:
Q  70 agtgttaatactttggggactgattattggagaagaatagcggacattccatattctaaccccatttgtggacatggactatttgttagtggcactgtta 169  Q
    |||||| |||||||||| || |||  ||||||||| ||| | ||| | |||||||||  |||  |||||||  ||||| |||||||  ||||||||||||    
T  33037881 agtgttcatactttgggtacggatacttggagaaggataccagacttcccatattctggcccgttttgtgggtatggaatatttgtcggtggcactgtta 33037980  T
Q  170 attggt 175  Q
    ||||||    
T  33037981 attggt 33037986  T

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Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 231
Target Start/End: Original strand, 33038016 - 33038060
Alignment:
Q  187 gtcattatttctcttgatttagagaaggagtcgtatcaaaagctt 231  Q
    |||||| ||||||||||||| |||||||| |||||||||| ||||    
T  33038016 gtcattgtttctcttgatttggagaaggaatcgtatcaaacgctt 33038060  T

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Target: chr5 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 108
Target Start/End: Original strand, 20292716 - 20292757
Alignment:
Q  67 attagtgttaatactttggggactgattattggagaagaata 108  Q
    ||||||||| |||||||||| ||||| |||||||||||||||    
T  20292716 attagtgttcatactttgggtactgaatattggagaagaata 20292757  T

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Target: chr7 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 1421591 - 1421551
Alignment:
Q  7 tttggatatgatcattttattgataattataaggttgttgc 47  Q
    ||||||||||||| ||| ||||||||||| |||||||||||    
T  1421591 tttggatatgatcctttcattgataattacaaggttgttgc 1421551  T

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Target: chr1 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 231
Target Start/End: Original strand, 51829632 - 51829676
Alignment:
Q  187 gtcattatttctcttgatttagagaaggagtcgtatcaaaagctt 231  Q
    |||||| ||||| |||||||| |||||||||||||||||| ||||    
T  51829632 gtcattgtttcttttgatttacagaaggagtcgtatcaaacgctt 51829676  T

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