View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7807_high_1 (Length: 1045)

Name: NF7807_high_1
Description: NF7807
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7807_high_1
NF7807_high_1
[»] chr7 (23 HSPs)
chr7 (14-1026)||(37201911-37202917)
chr7 (681-1010)||(29715831-29716157)
chr7 (693-936)||(25591918-25592161)
chr7 (661-805)||(25439658-25439802)
chr7 (661-805)||(28491171-28491315)
chr7 (932-1020)||(13465458-13465547)
chr7 (854-1010)||(48609091-48609247)
chr7 (856-1010)||(758835-758989)
chr7 (932-1020)||(28491315-28491404)
chr7 (900-1018)||(34659362-34659480)
chr7 (856-1010)||(46211663-46211817)
chr7 (682-819)||(45855342-45855479)
chr7 (681-889)||(34658871-34659078)
chr7 (854-986)||(39719883-39720015)
chr7 (932-1020)||(25439572-25439658)
chr7 (679-761)||(13465332-13465414)
chr7 (682-801)||(27096986-27097104)
chr7 (682-801)||(27181199-27181317)
chr7 (860-1010)||(83617-83768)
chr7 (680-743)||(5283074-5283137)
chr7 (681-936)||(14046792-14047046)
chr7 (681-936)||(14356822-14357076)
chr7 (962-1015)||(40253630-40253683)
[»] chr5 (19 HSPs)
chr5 (679-1018)||(16908633-16908968)
chr5 (684-889)||(22098888-22099092)
chr5 (681-1010)||(41640054-41640382)
chr5 (661-800)||(40528260-40528399)
chr5 (854-986)||(17768986-17769118)
chr5 (898-1010)||(34034071-34034183)
chr5 (899-1010)||(17695896-17696007)
chr5 (854-986)||(13517502-13517634)
chr5 (932-1019)||(40528168-40528255)
chr5 (921-1019)||(19948828-19948926)
chr5 (682-865)||(14521410-14521593)
chr5 (684-817)||(3498677-3498810)
chr5 (681-869)||(34033839-34034026)
chr5 (835-1018)||(40361016-40361197)
chr5 (661-743)||(7008765-7008849)
chr5 (881-946)||(22099209-22099273)
chr5 (682-817)||(42352925-42353061)
chr5 (747-863)||(19948982-19949098)
chr5 (681-862)||(17698666-17698842)
[»] chr6 (14 HSPs)
chr6 (679-1020)||(29486224-29486562)
chr6 (729-1016)||(24428618-24428907)
chr6 (680-936)||(22956511-22956766)
chr6 (680-936)||(23831626-23831881)
chr6 (661-805)||(1780740-1780884)
chr6 (932-1020)||(1780651-1780740)
chr6 (682-936)||(31216353-31216609)
chr6 (893-1010)||(29363531-29363648)
chr6 (682-819)||(33224522-33224659)
chr6 (682-817)||(904216-904352)
chr6 (854-1010)||(34729779-34729935)
chr6 (779-908)||(27673916-27674044)
chr6 (682-819)||(8560084-8560222)
chr6 (681-719)||(27673842-27673880)
[»] chr4 (18 HSPs)
chr4 (682-1018)||(21790525-21790861)
chr4 (694-1009)||(52628054-52628371)
chr4 (699-1009)||(54165954-54166264)
chr4 (681-986)||(48861760-48862063)
chr4 (661-799)||(22785884-22786022)
chr4 (681-1010)||(8745700-8746028)
chr4 (688-1010)||(48840949-48841262)
chr4 (666-799)||(6016913-6017046)
chr4 (679-799)||(2407029-2407149)
chr4 (932-1020)||(22786028-22786116)
chr4 (932-1020)||(2407155-2407244)
chr4 (932-1020)||(6016819-6016907)
chr4 (854-986)||(43892532-43892664)
chr4 (776-869)||(856828-856921)
chr4 (682-863)||(16608526-16608706)
chr4 (739-931)||(17816045-17816237)
chr4 (684-817)||(8762822-8762955)
chr4 (752-817)||(5476594-5476659)
[»] scaffold0002 (1 HSPs)
scaffold0002 (691-1018)||(428342-428667)
[»] chr8 (19 HSPs)
chr8 (679-953)||(32415666-32415940)
chr8 (680-936)||(6115005-6115261)
chr8 (776-1011)||(13541419-13541653)
chr8 (776-1011)||(13682820-13683054)
chr8 (754-1009)||(38172793-38173038)
chr8 (932-1020)||(12491566-12491655)
chr8 (847-986)||(40118061-40118198)
chr8 (924-1018)||(18881850-18881944)
chr8 (681-1010)||(43114971-43115301)
chr8 (680-984)||(41570189-41570493)
chr8 (845-1010)||(38699750-38699915)
chr8 (854-986)||(4072237-4072369)
chr8 (682-863)||(13741472-13741652)
chr8 (854-986)||(21441603-21441735)
chr8 (854-986)||(41323191-41323323)
chr8 (679-805)||(12491440-12491566)
chr8 (682-863)||(1233704-1233884)
chr8 (682-863)||(13641060-13641240)
chr8 (682-801)||(5808853-5808971)
[»] scaffold0110 (1 HSPs)
scaffold0110 (684-986)||(6921-7225)
[»] scaffold0186 (1 HSPs)
scaffold0186 (748-1018)||(22538-22812)
[»] chr3 (20 HSPs)
chr3 (681-986)||(16152063-16152366)
chr3 (661-799)||(20843290-20843428)
chr3 (932-1020)||(40763813-40763902)
chr3 (679-805)||(40763687-40763813)
chr3 (932-1017)||(20843199-20843284)
chr3 (854-1010)||(17652973-17653129)
chr3 (661-803)||(3458175-3458319)
chr3 (682-819)||(19795412-19795549)
chr3 (854-986)||(21295936-21296068)
chr3 (854-986)||(46823808-46823940)
chr3 (713-819)||(35061851-35061957)
chr3 (815-968)||(11027911-11028064)
chr3 (932-1020)||(3458085-3458173)
chr3 (703-936)||(11906662-11906890)
chr3 (696-801)||(29123378-29123482)
chr3 (681-793)||(11033965-11034077)
chr3 (680-936)||(52403345-52403595)
chr3 (682-788)||(36312514-36312619)
chr3 (921-1018)||(29648410-29648507)
chr3 (748-802)||(40785337-40785391)
[»] chr2 (16 HSPs)
chr2 (681-1010)||(4435024-4435352)
chr2 (910-1017)||(42799168-42799275)
chr2 (665-799)||(45656049-45656183)
chr2 (932-1020)||(16546354-16546443)
chr2 (681-885)||(38881095-38881298)
chr2 (932-1020)||(39070203-39070292)
chr2 (679-805)||(16546228-16546354)
chr2 (932-1020)||(45655955-45656043)
chr2 (932-1021)||(37614591-37614683)
chr2 (679-800)||(26180431-26180551)
chr2 (798-1015)||(21746162-21746379)
chr2 (684-817)||(35524906-35525039)
chr2 (700-764)||(39070364-39070428)
chr2 (684-817)||(8230369-8230503)
chr2 (682-739)||(10412041-10412098)
chr2 (537-602)||(10781926-10781991)
[»] chr1 (22 HSPs)
chr1 (681-1010)||(10177670-10177995)
chr1 (681-986)||(23614402-23614705)
chr1 (681-1010)||(10406174-10406499)
chr1 (776-986)||(1600596-1600805)
chr1 (681-1010)||(11142442-11142770)
chr1 (689-986)||(47367639-47367935)
chr1 (686-1010)||(19313158-19313479)
chr1 (661-793)||(29799162-29799293)
chr1 (661-805)||(30950906-30951050)
chr1 (932-1020)||(30950817-30950906)
chr1 (845-1010)||(44961383-44961548)
chr1 (854-986)||(15757680-15757812)
chr1 (682-817)||(21972199-21972335)
chr1 (932-1017)||(29799065-29799150)
chr1 (854-986)||(10620067-10620199)
chr1 (748-863)||(29357170-29357284)
chr1 (831-947)||(52111063-52111177)
chr1 (811-935)||(33241370-33241493)
chr1 (956-1020)||(28403130-28403194)
chr1 (716-863)||(27696645-27696790)
chr1 (943-1018)||(33240871-33240946)
chr1 (750-805)||(50074023-50074077)
[»] scaffold0361 (1 HSPs)
scaffold0361 (684-803)||(6931-7049)
[»] scaffold0005 (1 HSPs)
scaffold0005 (684-1010)||(292254-292579)
[»] scaffold0481 (1 HSPs)
scaffold0481 (681-1004)||(6455-6773)
[»] scaffold1709 (1 HSPs)
scaffold1709 (681-882)||(1250-1451)
[»] scaffold0271 (1 HSPs)
scaffold0271 (697-817)||(20141-20262)
[»] scaffold1554 (1 HSPs)
scaffold1554 (840-934)||(719-812)


Alignment Details
Target: chr7 (Bit Score: 852; Significance: 0; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 852; E-Value: 0
Query Start/End: Original strand, 14 - 1026
Target Start/End: Original strand, 37201911 - 37202917
Alignment:
Q  14 acatcagtgtgagactcaagtaaaagccaggttggctagaagaatatgttaagagacattgaaacaacaaatgaagaataacacacctaccttagtcact 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37201911 acatcagtgtgagactcaagtaaaagccaggttggctagaagaatatgttaagagacattgaaacaacaaatgaagaataacacacctaccttagtcact 37202010  T
Q  114 tttactcaatttgaagatcatgtgcactttgaatatgcggtgaagaatctcaattggaggagagccatggatgttgagttgaaag--ttatagagagaaa 211  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||  |||||||||||||    
T  37202011 tttactcaatttgaagatcatgtgcactttgaatatgcagtgaagaatctcaattggaggagagccatggatgttgagatgaaagctttatagagagaaa 37202110  T
Q  212 tgaaacttggcatgactacactttccggtggagctaaaa-aatggatttaaatgggtatttaataccaaatataatgagaaaggagatgttgaaaagtac 310  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37202111 tgaaacttggcatgactacactttccggtggagctaaaaaaatggatttaaatgggtatttaataccaaatataatgagaaaggagatgttgaaaagtac 37202210  T
Q  311 aaggcacggctactggcaaaacaatactcccaaatacttttaacgaggtgtttgcataagtgacaagatgggatatcataagaacaatcattgttgtgca 410  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||    
T  37202211 aaggcacggctagtggcaaaacaatactcccaaatacgtttaacgaggtgtttgcattagtgacaagatggaatatcataagaacaaccattgttgtgca 37202310  T
Q  411 aactattagaggttggagcgtataatagttagagatgaaaagtattttcctacatggagagatcacaaatacattttatgttgggaaccataagggttat 510  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37202311 aactattagaggttggagcgtatactagttagagatgaaaagtgttttcctacatggagagatcacaaatacattttatgttgggaaccataagggttat 37202410  T
Q  511 gtgaagaaggagagtaaggataagtctacaagttgaagaaagctttgtatggtttaaggcaagatcccaaatcttggtatagcaagattgaaagctattt 610  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||         
T  37202411 gtgaagaaggatagtaaggataagtctacaagttgaagaaagctttgtatggtttaaggcaagatcccaaagcttggtatagcaagattgaaagc----- 37202505  T
Q  611 tagtattttcaaaaggagggatttgagaagcttacctccaagcacgcggcggcgtagcctttccttgtcaaggggtagccttggctaccccaaaaaatat 710  Q
       |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  37202506 ---tattttcaaaaggagggatttgagaagcgtacctccaagcacgcgggggcgtagcctttccttgccaaggggtagccttggcta-cccaaaaaatat 37202601  T
Q  711 attattcttcaattggttggtataaatttatatccgactacctcaaataataaatattaagccatcccaaataaatttagttgtcgaaaattaacttaag 810  Q
    |||||||||||||||||||||||| ||||||||||  || || ||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||    
T  37202602 attattcttcaattggttggtatatatttatatcctgctgccccaaataataaatattaagccatctcaaacaaatttagttgtcgaaaattaacataag 37202701  T
Q  811 taagaaagtaaaattattaatacatgatggataaatttatttatattggtttgatacttctgctctcaataacaattatggtgaaaactttttcaacatt 910  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  37202702 taagaaagtaaaattattaatacatgatggataaatttatttatattggtttgatacttctgctctcaataataattatggtgaaaattttttcaacatt 37202801  T
Q  911 aaaagtttttaagacaatagtcataaacaaattaaatggacattcagtttcttgcaaataatctatttgtttacatcggaagaaacattattaatctatt 1010  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  37202802 aaaagttattaagacaatagtcataaacaaattaaatggacattcagtttcttgcaaataatctatttgtttacatcagaaaaaacattattaatctatt 37202901  T
Q  1011 tagtaaacggccaact 1026  Q
    ||||||||||||||||    
T  37202902 tagtaaacggccaact 37202917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 681 - 1010
Target Start/End: Complemental strand, 29716157 - 29715831
Alignment:
Q  681 aggggtagccttggctaccccaaaaaatatattattcttc-aattggttggtataaatttatatccgactacctcaaataataaatattaagccatccca 779  Q
    ||||||||| ||||||||||||||||| | |||||||||  || |||| |||||  |||| ||| || ||||| ||||||||||||||| ||| | ||||    
T  29716157 aggggtagc-ttggctaccccaaaaaaaaaattattcttttaagtggtcggtatgtatttttattcggctaccccaaataataaatattgagctacccca 29716059  T
Q  780 aataaatttagttgtcgaaaattaacttaagtaagaaagtaaaattattaatacatgatggataaatttatttatattggtttgatacttctgctctcaa 879  Q
    || |||||| |||| | ||||||| | ||  ||| |||  ||||  |||| |||| |||||||| |||||||| |||| ||||||||||  || ||||||    
T  29716058 aacaaatttcgttg-caaaaattagcatacataataaataaaaa--attactacaagatggatagatttatttgtatttgtttgatactcttgatctcaa 29715962  T
Q  880 taacaattatggtgaaaactttttcaacattaaaagtttttaagacaatagtcataaacaaattaaatggacattcagtttcttgcaaataatctatttg 979  Q
    ||||||  || |  |||  |||||||||| ||||| || | ||||||||||||||| |||||||||||||||  | ||||||||| |||||| ||||||     
T  29715961 taacaacaatagaaaaacttttttcaacaataaaaattatcaagacaatagtcatagacaaattaaatggacggtgagtttcttgtaaataacctattta 29715862  T
Q  980 tttacatcggaagaaacattattaatctatt 1010  Q
    |||||||  ||| | ||||||||||||||||    
T  29715861 tttacatttgaaaagacattattaatctatt 29715831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 693 - 936
Target Start/End: Original strand, 25591918 - 25592161
Alignment:
Q  693 ggctaccccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataataaatattaagccatcccaaataaatttagtt 792  Q
    ||||||||||||||| |||||||||||  ||| ||||||||  || |||||||  ||||| ||||||||||||||| ||| |  ||||| || || ||||    
T  25591918 ggctaccccaaaaaaaatattattcttgtattagttggtatgtatctatatccagctaccccaaataataaatattgagctactccaaacaagttcagtt 25592017  T
Q  793 gtcgaaaattaacttaagtaagaaagtaaaattattaatacatgatggataaatttatttatattggtttgatacttctgctctcaataacaattatggt 892  Q
    | | ||||  ||| ||| |||||||||||||  |||| ||||| || |||| |||||||| ||||| |||| |||||| |||||||||||||||||| |     
T  25592018 gccaaaaaacaacataaataagaaagtaaaaaaattattacatcattgatagatttatttgtattgatttggtacttccgctctcaataacaattataga 25592117  T
Q  893 gaaaactttttcaacattaaaagtttttaagacaatagtcataa 936  Q
    || ||||||||||||| |||||  | | |||| |||||||||||    
T  25592118 gagaactttttcaacaataaaaactatcaagataatagtcataa 25592161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 661 - 805
Target Start/End: Complemental strand, 25439802 - 25439658
Alignment:
Q  661 ggcgtagcctttccttgtcaaggggtagccttggctaccccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataa 760  Q
    |||| |||| ||| ||| |||||||||||||||||||||||||||||||||||| |||| |||  |||||| |||||| |||| || ||||| |||||||    
T  25439802 ggcgcagcccttcattgacaaggggtagccttggctaccccaaaaaatatattaatctttaataagttggtgtaaattaatattcggctaccccaaataa 25439703  T
Q  761 taaatattaagccatcccaaataaatttagttgtcgaaaattaac 805  Q
    |||||||| ||| | ||| || ||||| ||||| |||||||||||    
T  25439702 taaatattgagctaccccgaacaaattcagttgccgaaaattaac 25439658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 661 - 805
Target Start/End: Original strand, 28491171 - 28491315
Alignment:
Q  661 ggcgtagcctttccttgtcaaggggtagccttggctaccccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataa 760  Q
    |||| |||| ||| ||| |||||||||||||||||||||||||||||||||||| |||| |||  |||||| |||||| |||  || ||||| |||||||    
T  28491171 ggcgcagcccttcattgacaaggggtagccttggctaccccaaaaaatatattaatctttaataagttggtgtaaattgatactcggctaccccaaataa 28491270  T
Q  761 taaatattaagccatcccaaataaatttagttgtcgaaaattaac 805  Q
    |||| ||| ||| |||||||| ||||| ||||| |||||||||||    
T  28491271 taaacattgagctatcccaaacaaattcagttgccgaaaattaac 28491315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 932 - 1020
Target Start/End: Original strand, 13465458 - 13465547
Alignment:
Q  932 cataaacaaattaaatggacattcagtttcttgcaaataatctatttg-tttacatcggaagaaacattattaatctatttagtaaacgg 1020  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||| |||| | ||||||||||||||||||||||||||    
T  13465458 cataaacaaattaaatggacattgagtttcttgcaaataacctatttgttttacattggaaaagacattattaatctatttagtaaacgg 13465547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 854 - 1010
Target Start/End: Complemental strand, 48609247 - 48609091
Alignment:
Q  854 tattggtttgatacttctgctctcaataacaattatggtgaaaactttttcaacattaaaagtttttaagacaatagtcataaacaaattaaatggacat 953  Q
    |||||||||||||||||   ||||||||||||  ||   |||||||||||||||| ||||| |  | ||||||||||||||| |||||||||||| |||     
T  48609247 tattggtttgatacttcccgtctcaataacaacaataaagaaaactttttcaacaataaaaatgatcaagacaatagtcatagacaaattaaatgtacaa 48609148  T
Q  954 tcagtttcttgcaaataatctatttgtttacatcggaagaaacattattaatctatt 1010  Q
    | |||||||||||||||| |||||| || ||||  ||| | ||||||||||||||||    
T  48609147 tgagtttcttgcaaataacctatttattaacatttgaaaacacattattaatctatt 48609091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 856 - 1010
Target Start/End: Original strand, 758835 - 758989
Alignment:
Q  856 ttggtttgatacttctgctctcaataacaattatggtgaaaactttttcaacattaaaagtttttaagacaatagtcataaacaaattaaatggacattc 955  Q
    |||||||||||||||   ||||||||||||  ||   |||| ||||||||| | ||||| |  | ||||||||||||||| |||||||||||| ||| |     
T  758835 ttggtttgatacttcccgtctcaataacaacgataaagaaacctttttcaataataaaaatgatcaagacaatagtcatagacaaattaaatgtacaatg 758934  T
Q  956 agtttcttgcaaataatctatttgtttacatcggaagaaacattattaatctatt 1010  Q
    ||||||||||||||||||||||| |||||||  ||| | ||||||||||||||||    
T  758935 agtttcttgcaaataatctatttatttacatttgaaaagacattattaatctatt 758989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 932 - 1020
Target Start/End: Original strand, 28491315 - 28491404
Alignment:
Q  932 cataaacaaattaaatggacattcagtttcttgcaaataatctattt-gtttacatcggaagaaacattattaatctatttagtaaacgg 1020  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||  ||||||| |||| | ||||||||||||||||||||||||||    
T  28491315 cataaacaaattaaatggacattgagtttcttgcaaataacctatttattttacattggaaaagacattattaatctatttagtaaacgg 28491404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 900 - 1018
Target Start/End: Original strand, 34659362 - 34659480
Alignment:
Q  900 ttttcaacattaaaagtttttaagacaatagtcataaacaaattaaatggacattcagtttcttgcaaataatctatttgtttacatcggaagaaacatt 999  Q
    ||||||||| ||||| || | |||||||||||||||||||||||||||||| | | ||||| ||||||||||  |||| ||||||||   || | |||||    
T  34659362 ttttcaacaataaaaattatcaagacaatagtcataaacaaattaaatggataatgagtttattgcaaataacttattagtttacatttaaaaatacatt 34659461  T
Q  1000 attaatctatttagtaaac 1018  Q
    |||||||||||||||||||    
T  34659462 attaatctatttagtaaac 34659480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 856 - 1010
Target Start/End: Complemental strand, 46211817 - 46211663
Alignment:
Q  856 ttggtttgatacttctgctctcaataacaattatggtgaaaactttttcaacattaaaagtttttaagacaatagtcataaacaaattaaatggacattc 955  Q
    ||||||||||||||    ||||||||||||  ||   |||| ||||||||||| ||||| |  | ||||||||||||||| |||||||||||| ||| |     
T  46211817 ttggtttgatactttccgtctcaataacaacgataaagaaacctttttcaacaataaaaatgatcaagacaatagtcatagacaaattaaatgtacaatg 46211718  T
Q  956 agtttcttgcaaataatctatttgtttacatcggaagaaacattattaatctatt 1010  Q
    |||||||||||||||| |||||| |||||||  ||| | ||||||||||||||||    
T  46211717 agtttcttgcaaataacctatttatttacatttgaaaagacattattaatctatt 46211663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 682 - 819
Target Start/End: Original strand, 45855342 - 45855479
Alignment:
Q  682 ggggtagccttggctaccccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataataaatattaagccatcccaaa 781  Q
    ||||||||| | |||||||||||| | | | ||||||| ||||||| |||||| ||||||||    ||||| ||||||||||||||| ||| | ||||||    
T  45855342 ggggtagcccttgctaccccaaaagaaaaaatattcttgaattggtcggtatatatttatatttagctaccccaaataataaatattgagctaccccaaa 45855441  T
Q  782 taaatttagttgtcgaaaattaacttaagtaagaaagt 819  Q
    ||| ||| |||||||||||||||| ||| |||||||||    
T  45855442 taagtttggttgtcgaaaattaacataaataagaaagt 45855479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 681 - 889
Target Start/End: Original strand, 34658871 - 34659078
Alignment:
Q  681 aggggtagccttggctaccccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataataaatattaagccatcccaa 780  Q
    ||||||||| |||||||||  ||||||  ||| |||||||||||||| |||||  |||||||| |  |||||  |||||||| | ||| ||| |  ||||    
T  34658871 aggggtagctttggctaccaaaaaaaaattat-attcttcaattggtcggtatgtatttatattccgctaccctaaataatatacattgagctactccaa 34658969  T
Q  781 ataaatttagttgtcgaaaattaacttaagtaagaaagtaaaattattaatacatgatggataaatttatttatattggtttgatacttctgctctcaat 880  Q
    | || || |||||| ||||||||   ||| ||||||||||||| ||||| |||||||| |||  |||||| ||||||||||||||||||  | |||||||    
T  34658970 acaagttcagttgttgaaaattatgataaataagaaagtaaaaatattactacatgattgatcgatttatatatattggtttgatactttcggtctcaat 34659069  T
Q  881 aacaattat 889  Q
    || ||||||    
T  34659070 aataattat 34659078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 854 - 986
Target Start/End: Original strand, 39719883 - 39720015
Alignment:
Q  854 tattggtttgatacttctgctctcaataacaattatggtgaaaactttttcaacattaaaagtttttaagacaatagtcataaacaaattaaatggacat 953  Q
    |||||||||||||||||   ||||||||||||  ||   ||||  |||||||||| ||||| |  | ||||||||||||||| |||||||||||| |||     
T  39719883 tattggtttgatacttcccgtctcaataacaacaataaagaaacatttttcaacaataaaaatgatcaagacaatagtcatagacaaattaaatgtacaa 39719982  T
Q  954 tcagtttcttgcaaataatctatttgtttacat 986  Q
    | |||||||||||||||| |||||| |||||||    
T  39719983 tgagtttcttgcaaataacctatttatttacat 39720015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 932 - 1020
Target Start/End: Complemental strand, 25439658 - 25439572
Alignment:
Q  932 cataaacaaattaaatggacattcagtttcttgcaaataatctatttg-tttacatcggaagaaacattattaatctatttagtaaacgg 1020  Q
    ||||||||||||||||||||||| |||||||||||   || ||||||| ||||||| |||| | ||||||||||||||||||||||||||    
T  25439658 cataaacaaattaaatggacattgagtttcttgca---aacctatttgttttacattggaaaagacattattaatctatttagtaaacgg 25439572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 679 - 761
Target Start/End: Original strand, 13465332 - 13465414
Alignment:
Q  679 caaggggtagccttggctaccccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataat 761  Q
    |||||||||||||||||||||||||||||||||||| |||| |||  |||||| |||||| |||| || ||||| ||||||||    
T  13465332 caaggggtagccttggctaccccaaaaaatatattaatctttaataagttggtgtaaattaatattcggctaccccaaataat 13465414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 682 - 801
Target Start/End: Original strand, 27096986 - 27097104
Alignment:
Q  682 ggggtagccttggctaccccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataataaatattaagccatcccaaa 781  Q
    ||||||||| | |||||||||||||| | ||||||||| ||||| || ||||  |||| ||||   ||||| ||||||||||||||| ||| | ||||||    
T  27096986 ggggtagcccttgctaccccaaaaaaaa-attattctttaattgattagtatctatttgtatctagctaccccaaataataaatattgagctaccccaaa 27097084  T
Q  782 taaatttagttgtcgaaaat 801  Q
     |||||| ||||||||||||    
T  27097085 caaatttggttgtcgaaaat 27097104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 682 - 801
Target Start/End: Complemental strand, 27181317 - 27181199
Alignment:
Q  682 ggggtagccttggctaccccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataataaatattaagccatcccaaa 781  Q
    ||||||||| | |||||||||||||| | ||||||||| ||||| || ||||  |||| ||||   ||||| ||||||||||||||| ||| | ||||||    
T  27181317 ggggtagcccttgctaccccaaaaaaaa-attattctttaattgattagtatctatttgtatctagctaccccaaataataaatattgagctaccccaaa 27181219  T
Q  782 taaatttagttgtcgaaaat 801  Q
     |||||| ||||||||||||    
T  27181218 caaatttggttgtcgaaaat 27181199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 860 - 1010
Target Start/End: Complemental strand, 83768 - 83617
Alignment:
Q  860 tttgatacttctgctctcaataacaattatggtgaaaactttttcaacattaaaagtttttaagacaatagtcataaacaaattaaatgg-acattcagt 958  Q
    |||||||||||   ||||||||||||  ||   |||| ||||||||||| ||||| |  | ||||||||||||||| ||||||||||    ||| | |||    
T  83768 tttgatacttcccgtctcaataacaacgataaagaaacctttttcaacaataaaaatgatcaagacaatagtcatagacaaattaaaacatacaatgagt 83669  T
Q  959 ttcttgcaaataatctatttgtttacatcggaagaaacattattaatctatt 1010  Q
    |||||| |||||| |||||| |||||||  ||| | ||||||||||||||||    
T  83668 ttcttgtaaataacctatttatttacatttgaaaagacattattaatctatt 83617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 680 - 743
Target Start/End: Complemental strand, 5283137 - 5283074
Alignment:
Q  680 aaggggtagccttggctaccccaaaaaatatattattcttcaattggttggtataaatttatat 743  Q
    |||||||||| ||||| ||||||||||||| ||||||||| |||| ||||||||  ||||||||    
T  5283137 aaggggtagctttggcaaccccaaaaaataaattattcttgaattagttggtatgtatttatat 5283074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 681 - 936
Target Start/End: Original strand, 14046792 - 14047046
Alignment:
Q  681 aggggtagccttggctaccccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataataaa-tattaagccatccca 779  Q
    ||||||||||||||||||||| ||||| | |||||||||| | | ||||| ||  ||||||| || |||||| ||||||||||| | || ||| | || |    
T  14046792 aggggtagccttggctacccc-aaaaagaaattattcttctagttgttggaatgtatttatacccaactaccccaaataataaatttttgagctacccta 14046890  T
Q  780 aataaatttagttgtcgaaaattaacttaagtaagaaagt-aaaattattaatacatgatggataaatttatttatattggtttgatacttctgctctca 878  Q
    || || |||| ||  ||||||||| | ||  ||||||||| ||||  | || ||||||||  ||| |||||||| |||| ||||  |||||  | |||||    
T  14046891 aacaagtttaattaacgaaaattagcatatttaagaaagtaaaaaaaaatattacatgat-tatatatttatttgtattagttttgtactttcggtctca 14046989  T
Q  879 ataacaattatggtgaaaactttttcaacattaaaagtttttaagacaatagtcataa 936  Q
    ||||||||||| |  || || ||||||||| |||||  | ||||||||||||||||||    
T  14046990 ataacaattatagaaaagac-ttttcaacaataaaaactattaagacaatagtcataa 14047046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 681 - 936
Target Start/End: Original strand, 14356822 - 14357076
Alignment:
Q  681 aggggtagccttggctaccccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataataaa-tattaagccatccca 779  Q
    ||||||||||||||||||||| ||||| | |||||||||| | | ||||| ||  ||||||| || |||||| ||||||||||| | || ||| | || |    
T  14356822 aggggtagccttggctacccc-aaaaagaaattattcttctagttgttggaatgtatttatacccaactaccccaaataataaatttttgagctacccta 14356920  T
Q  780 aataaatttagttgtcgaaaattaacttaagtaagaaagt-aaaattattaatacatgatggataaatttatttatattggtttgatacttctgctctca 878  Q
    || || |||| ||  ||||||||| | ||  ||||||||| ||||  | || ||||||||  ||| |||||||| |||| ||||  |||||  | |||||    
T  14356921 aacaagtttaattaacgaaaattagcatatttaagaaagtaaaaaaaaatattacatgat-tatatatttatttgtattagttttgtactttcggtctca 14357019  T
Q  879 ataacaattatggtgaaaactttttcaacattaaaagtttttaagacaatagtcataa 936  Q
    ||||||||||| |  || || ||||||||| |||||  | ||||||||||||||||||    
T  14357020 ataacaattatagaaaagac-ttttcaacaataaaaactattaagacaatagtcataa 14357076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 962 - 1015
Target Start/End: Complemental strand, 40253683 - 40253630
Alignment:
Q  962 ttgcaaataatctatttgtttacatcggaagaaacattattaatctatttagta 1015  Q
    ||||||||||| ||||||||||||| | || | ||||||||| |||||||||||    
T  40253683 ttgcaaataatttatttgtttacattgaaaaagacattattagtctatttagta 40253630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 172; Significance: 7e-92; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 172; E-Value: 7e-92
Query Start/End: Original strand, 679 - 1018
Target Start/End: Complemental strand, 16908968 - 16908633
Alignment:
Q  679 caaggggtagccttggctaccccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataataaatattaagccatccc 778  Q
    ||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||| ||| | |||    
T  16908968 caaggggcagccttggctaccccaaaaaa-atattattcttcatttggttggtatatatttatatccggctacctcaaataataaatattgagcta-ccc 16908871  T
Q  779 aaataaatttagttgtcgaaaattaacttaagtaagaaagtaaaattattaatacatgatggataaatttatttatattggtttgatacttctgctctca 878  Q
    ||| ||||| |||||| ||| |||||| ||||||||||||||||| |||||||| ||||| |||| |||| ||||||||||||||||||||| | |||||    
T  16908870 aaacaaattcagttgttgaatattaacataagtaagaaagtaaaaatattaatatatgattgatagatttgtttatattggtttgatacttccggtctca 16908771  T
Q  879 ataacaattatggtgaaaactttttcaacattaaaagtttttaagacaatagtcataaacaaattaaatggacattcagtttcttgcaaataatctattt 978  Q
    ||||||||||| | |||||| ||||||||  ||||| || ||||||||||||| ||||| |||||||||||||| | |||||||| ||| ||| ||||||    
T  16908770 ataacaattatagagaaaac-ttttcaacgataaaaattattaagacaatagttataaataaattaaatggacaat-agtttctttcaagtaacctattt 16908673  T
Q  979 gtttacatcggaagaaacattattaatctatttagtaaac 1018  Q
    |||||||| | || | ||||||||||||||||||||||||    
T  16908672 gtttacattgaaaaatacattattaatctatttagtaaac 16908633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 684 - 889
Target Start/End: Original strand, 22098888 - 22099092
Alignment:
Q  684 ggtagccttggctaccccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataataaatattaagccatcccaaata 783  Q
    |||||| |||||||||| |||||||| || ||| |||||| ||| |||||  |||||||| || ||||| ||||||| ||||||| ||| | |||||| |    
T  22098888 ggtagctttggctacccaaaaaaataaat-atttttcaatcggtcggtatgtatttatattcggctaccccaaataaaaaatattgagctaccccaaaca 22098986  T
Q  784 aatttagttgtcgaaaattaacttaagtaagaaagtaaaattattaatacatgatggataaatttatttatattggtttgatacttctgctctcaataac 883  Q
    | |||||||||||||||||||  ||| ||||||||||||| ||||| |||||||| |||| || ||||||||||||||||||||||    ||||||||||    
T  22098987 agtttagttgtcgaaaattaagataaataagaaagtaaaaatattactacatgattgatagatatatttatattggtttgatactttcaatctcaataac 22099086  T
Q  884 aattat 889  Q
    ||||||    
T  22099087 aattat 22099092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 681 - 1010
Target Start/End: Complemental strand, 41640382 - 41640054
Alignment:
Q  681 aggggtagccttggctaccccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataataaatattaagccatcccaa 780  Q
    ||||||||||||||||| ||||||||| ||||||||||| |||||  ||| |   |||||| | ||| |||||||||||||||| ||| ||  | || ||    
T  41640382 aggggtagccttggctatcccaaaaaa-atattattcttgaattgactgggaagtatttatcttcgattacctcaaataataaacattgagttaccctaa 41640284  T
Q  781 ataaatttagttgtcgaaaattaacttaagtaagaaagtaaaatta-ttaatacatgatggataaatttatttatattggtttgatacttctgctctcaa 879  Q
    |||| |||||||| | ||| ||| | ||| ||| |||||||||  | ||| |||| ||| |||| |||||||| |||||||||||||||||   ||||||    
T  41640283 ataagtttagttg-caaaagttagcataaataataaagtaaaaaaaattactacaagattgatagatttatttgtattggtttgatacttcccgtctcaa 41640185  T
Q  880 taacaattatggtgaaaactttttcaacattaaaagtttttaagacaatagtcataaacaaattaaatggacattcagtttcttgcaaataatctatttg 979  Q
    ||||||  ||   |||| ||||||||||| ||||| |  | |||| |||||||||| |||||||||||| ||| | ||||||||||||||||  |||||     
T  41640184 taacaacaataaagaaacctttttcaacaataaaaatgatcaagaaaatagtcatagacaaattaaatgtacaatgagtttcttgcaaataacatattta 41640085  T
Q  980 tttacatcggaagaaacattattaatctatt 1010  Q
    |||||||  ||| | ||||||||||||||||    
T  41640084 tttacatttgaaaagacattattaatctatt 41640054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 661 - 800
Target Start/End: Complemental strand, 40528399 - 40528260
Alignment:
Q  661 ggcgtagcctttccttgtcaaggggtagccttggctaccccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataa 760  Q
    ||||||||| ||| ||| |||||| ||| ||||||||||  ||||||||||||| |||| ||||||||||||||||||||||| |||||| |  ||||||    
T  40528399 ggcgtagcccttcattggcaagggatagtcttggctaccttaaaaaatatattaatctttaattggttggtataaatttatattcgactatcctaaataa 40528300  T
Q  761 taaatattaagccatcccaaataaatttagttgtcgaaaa 800  Q
    |||| ||| ||| | |||||  ||||| ||||| ||||||    
T  40528299 taaacattgagctaccccaagcaaattcagttgccgaaaa 40528260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 854 - 986
Target Start/End: Complemental strand, 17769118 - 17768986
Alignment:
Q  854 tattggtttgatacttctgctctcaataacaattatggtgaaaactttttcaacattaaaagtttttaagacaatagtcataaacaaattaaatggacat 953  Q
    |||||||||||||||||   ||||||||||||  ||   |||| ||||||||||| ||||| |  | ||||||||||||||| |||||||||||| |||     
T  17769118 tattggtttgatacttcccgtctcaataacaacaataaagaaacctttttcaacaataaaaatgatcaagacaatagtcatagacaaattaaatgtacaa 17769019  T
Q  954 tcagtttcttgcaaataatctatttgtttacat 986  Q
    | |||||||||||||||| |||||| |||||||    
T  17769018 tgagtttcttgcaaataacctatttatttacat 17768986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 898 - 1010
Target Start/End: Original strand, 34034071 - 34034183
Alignment:
Q  898 ctttttcaacattaaaagtttttaagacaatagtcataaacaaattaaatggacattcagtttcttgcaaataatctatttgtttacatcggaagaaaca 997  Q
    ||||||||||| ||||| || | |||| |||||||||| |||||||||||||||| | ||||||||||||||||  ||||| |||||||  ||| | |||    
T  34034071 ctttttcaacaataaaaattatcaagagaatagtcatagacaaattaaatggacaatgagtttcttgcaaataacttatttatttacatttgaaaagaca 34034170  T
Q  998 ttattaatctatt 1010  Q
    |||||||||||||    
T  34034171 ttattaatctatt 34034183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 899 - 1010
Target Start/End: Complemental strand, 17696007 - 17695896
Alignment:
Q  899 tttttcaacattaaaagtttttaagacaatagtcataaacaaattaaatggacattcagtttcttgcaaataatctatttgtttacatcggaagaaacat 998  Q
    |||||||||| ||||| || | ||||||||||||||  ||||| |||||||||| | ||||||||||||||||  ||||| |||||||  ||| ||||||    
T  17696007 tttttcaacaataaaaattatcaagacaatagtcattgacaaactaaatggacagtgagtttcttgcaaataacttatttatttacatttgaaaaaacat 17695908  T
Q  999 tattaatctatt 1010  Q
    ||||||||||||    
T  17695907 tattaatctatt 17695896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 854 - 986
Target Start/End: Original strand, 13517502 - 13517634
Alignment:
Q  854 tattggtttgatacttctgctctcaataacaattatggtgaaaactttttcaacattaaaagtttttaagacaatagtcataaacaaattaaatggacat 953  Q
    |||||||||||||||||   ||||||||||||  ||   ||||  |||||||||| ||||| |  | ||||||||||||||| |||||||||||| |||     
T  13517502 tattggtttgatacttcccgtctcaataacaacaataaagaaacatttttcaacaataaaaatgatcaagacaatagtcatagacaaattaaatgtacaa 13517601  T
Q  954 tcagtttcttgcaaataatctatttgtttacat 986  Q
    | |||||||||||||||| |||||| |||||||    
T  13517602 tgagtttcttgcaaataacctatttatttacat 13517634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 932 - 1019
Target Start/End: Complemental strand, 40528255 - 40528168
Alignment:
Q  932 cataaacaaattaaatggacattcagtttcttgcaaataatctatttgtttacatcggaagaaacattattaatctatttagtaaacg 1019  Q
    |||||||||||||| |||| ||| |||||||| ||||||| |||||||||||||| | || | |||||||||||| ||||||||||||    
T  40528255 cataaacaaattaagtggatattgagtttcttacaaataacctatttgtttacattgaaaaagacattattaatcaatttagtaaacg 40528168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 921 - 1019
Target Start/End: Complemental strand, 19948926 - 19948828
Alignment:
Q  921 aagacaatagtcataaacaaattaaatggacattcagtttcttgcaaataatctatttgtttacatcggaagaaacattattaatctatttagtaaacg 1019  Q
    ||||||||||||||||||  |||||||||||| | | |||||||||||||||||| |||||||||| |||  ||| ||||||| || |||| |||||||    
T  19948926 aagacaatagtcataaacctattaaatggacaatgaatttcttgcaaataatctagttgtttacattggagaaaatattattattccattttgtaaacg 19948828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 682 - 865
Target Start/End: Original strand, 14521410 - 14521593
Alignment:
Q  682 ggggtagccttggctaccccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataataaatattaagccatcccaaa 781  Q
    ||||||||||| |||||| ||||||||| ||||||||| ||||| |  ||||||| ||| ||    ||| | ||||||||||||||| ||  | ||||||    
T  14521410 ggggtagcctttgctacctcaaaaaataaattattcttgaattgatcagtataaaattacatttagctatcccaaataataaatattgagttaccccaaa 14521509  T
Q  782 taaatttagtt-gtcgaaaattaacttaagtaagaaagtaaaattattaatacatgatggataaatttatttatattggtttgat 865  Q
    ||||||| ||| ||| ||||||| | ||| |||||| | ||||  |||| |||||||| |||| || ||||||||||||||||||    
T  14521510 taaatttggtttgtcaaaaattagcataaataagaaggaaaaaa-attactacatgattgatagatatatttatattggtttgat 14521593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 684 - 817
Target Start/End: Complemental strand, 3498810 - 3498677
Alignment:
Q  684 ggtagccttggctaccccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataataaatattaagccatcccaaata 783  Q
    ||||||| ||||||||||||||||  |||||||||| |||  ||||||||   |||||||    ||||| ||||||| ||||||| ||| | ||||||||    
T  3498810 ggtagccatggctaccccaaaaaaagtattattcttgaatatgttggtatgtttttatatttagctaccccaaataaaaaatatttagctaccccaaata 3498711  T
Q  784 aatttagttgtcgaaaattaacttaagtaagaaa 817  Q
    |||||| ||||  ||||||||| ||| |||||||    
T  3498710 aatttatttgttaaaaattaacataaataagaaa 3498677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 681 - 869
Target Start/End: Original strand, 34033839 - 34034026
Alignment:
Q  681 aggggtagccttggctaccccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataataaatattaagccatcccaa 780  Q
    ||||||||||||||||||||||||||| ||||||||||| |||| || |||||  ||| ||||| | ||||| ||| ||||||| |||  || | | |||    
T  34033839 aggggtagccttggctaccccaaaaaaaatattattcttgaattagtcggtatgtattgatatctggctaccccaattaataaacatttggctacctcaa 34033938  T
Q  781 ataaatttagttgtcgaaaattaacttaagtaagaaagtaaaattattaatacatgatggataaatttatttatattggtttgatactt 869  Q
    | || |||||||| | ||||||| | ||| ||| |||||||||  | || | ||  ||  ||| |||||||| ||||||||||||||||    
T  34033939 acaagtttagttg-caaaaattagcataaataataaagtaaaaaaactactccaaaattaatagatttatttgtattggtttgatactt 34034026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 835 - 1018
Target Start/End: Complemental strand, 40361197 - 40361016
Alignment:
Q  835 tgatggataaatttatttatattggtttgatacttctgctctcaataacaattatggtgaaaactttttcaacattaaaagtttttaagacaatagtcat 934  Q
    |||| |||| |||||| | ||| |||||| |||||||| |||||| |||| |||| | ||||||||||||||||  |||| || | || | ||||||||     
T  40361197 tgattgatagatttatctttatcggtttggtacttctggtctcaacaacatttatagagaaaactttttcaacaacaaaaattatcaacaaaatagtcag 40361098  T
Q  935 aaacaaattaaatggacattcagtttcttgcaaataatctatttgtttacatcggaagaaacattattaatctatttagtaaac 1018  Q
      |||  |||||| |  | | |||||||||||||||| ||||||||||| |||  || | ||||||||||||||||| ||||||    
T  40361097 ggaca--ttaaataggaaatgagtttcttgcaaataacctatttgtttagatcataaaagacattattaatctattttgtaaac 40361016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 661 - 743
Target Start/End: Original strand, 7008765 - 7008849
Alignment:
Q  661 ggcgtagcctttccttgtcaaggggtagccttggctacccc--aaaaaatatattattcttcaattggttggtataaatttatat 743  Q
    |||||| |||||| |||| |||||||||||||||||||| |  |||||| ||||||||||| |||| ||||||||  ||||||||    
T  7008765 ggcgtatcctttcattgtgaaggggtagccttggctacctcaaaaaaaaaatattattcttgaatttgttggtatgtatttatat 7008849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 881 - 946
Target Start/End: Original strand, 22099209 - 22099273
Alignment:
Q  881 aacaattatggtgaaaactttttcaacattaaaagtttttaagacaatagtcataaacaaattaaa 946  Q
    ||||||||| | |||||||||| ||||| |||||||| | |||||||||||||||| |||||||||    
T  22099209 aacaattatagagaaaactttt-caacaataaaagttatcaagacaatagtcataatcaaattaaa 22099273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 682 - 817
Target Start/End: Original strand, 42352925 - 42353061
Alignment:
Q  682 ggggtagccttggctaccccaaaaaa-tatattattcttcaattggttggtataaatttatatccgactacctcaaataataaatattaagccatcccaa 780  Q
    ||||||||||| ||||||| |||||| || ||||||||| ||||||||| |||||| ||| ||    ||||  ||||||||||||||| ||| | |||||    
T  42352925 ggggtagcctttgctacccaaaaaaaataaattattcttgaattggttg-tataaaattacatttagctactccaaataataaatattgagctaccccaa 42353023  T
Q  781 ataaatttag-ttgtcgaaaattaacttaagtaagaaa 817  Q
    ||||| || | ||||||||||||| | ||| |||||||    
T  42353024 ataaacttggtttgtcgaaaattagcataaataagaaa 42353061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 747 - 863
Target Start/End: Complemental strand, 19949098 - 19948982
Alignment:
Q  747 actacctcaaataataaatattaagccatcccaaataaatttagttgtcgaaaattaacttaagtaagaaagtaaaattattaatacatgatggataaat 846  Q
    |||||| | ||||||||| ||| ||| ||  ||||||| |||||||||||||||||||| ||| ||| ||| |||||  |||| ||||| || ||||  |    
T  19949098 actaccccgaataataaacattgagctatttcaaataagtttagttgtcgaaaattaacataaataaaaaattaaaaaaattactacataattgataggt 19948999  T
Q  847 ttatttatattggtttg 863  Q
    |||||| || |||||||    
T  19948998 ttatttgtaatggtttg 19948982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 681 - 862
Target Start/End: Complemental strand, 17698842 - 17698666
Alignment:
Q  681 aggggtagccttggctaccccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataataaatattaagccatcccaa 780  Q
    |||||||||||| ||||||  |||||| ||||| ||    || ||||||||||  |||| ||| ||  || ||||||||||||||||| ||| |||||||    
T  17698842 aggggtagcctttgctaccaaaaaaaaaatatttttg---aagtggttggtatgtatttttattcggttatctcaaataataaatattgagctatcccaa 17698746  T
Q  781 ataaatttagttgtcgaaaattaacttaagtaagaaagtaaaattattaatacatgatggataaatttatttatattggttt 862  Q
    | |||||| |||| | ||||||| | ||| ||| |||||||||  |||| |||| ||| |||| |||||||| |||| ||||    
T  17698745 acaaatttcgttg-caaaaattagcataaataataaagtaaaa-aattactacaagattgatagatttatttgtatttgttt 17698666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 162; Significance: 6e-86; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 162; E-Value: 6e-86
Query Start/End: Original strand, 679 - 1020
Target Start/End: Original strand, 29486224 - 29486562
Alignment:
Q  679 caaggggtagccttggctaccccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataataaatattaagccatccc 778  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||| | ||||||||||||||||| ||  ||| || ||    
T  29486224 caaggggtagccttggctaccccaaaaaatatactattcttcaattgtttggtataaaattatatctggctacctcaaataataaacatcgagctattcc 29486323  T
Q  779 aaataaatttagttgtcgaaaattaacttaagtaagaaagtaaaattattaatacatgatggataaatttatttatattggtttgatacttctgctctca 878  Q
    ||||||||||| ||||   |||||||| ||| ||||||||||||| |||||||||||||| |||| ||||||||||||||| |||||||||||| |||||    
T  29486324 aaataaatttaattgtaagaaattaacataaataagaaagtaaaaatattaatacatgattgatagatttatttatattgg-ttgatacttctggtctca 29486422  T
Q  879 ataacaattatggtgaaaactttttcaacattaaaagtttttaagacaatagtcataaacaaattaaatggacattcagtttcttgcaaataatctattt 978  Q
    |||| | |||| | |||||| ||||||| | ||||| || ||||||||||||||||||||||||||| |||||| | |||||||||||||||| ||||||    
T  29486423 ataatagttatagagaaaac-ttttcaagagtaaaaattattaagacaatagtcataaacaaattaattggacaat-agtttcttgcaaataacctattt 29486520  T
Q  979 gtttacatcggaagaaacattattaatctatttagtaaacgg 1020  Q
      |||||| | || | | |||| |||||||||||||||||||    
T  29486521 tcttacattgaaaaatatattaataatctatttagtaaacgg 29486562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 729 - 1016
Target Start/End: Original strand, 24428618 - 24428907
Alignment:
Q  729 ggtataaatttatatccgactacctcaaataataaatattaagccatcccaaataaatttagttgtcgaaaattaacttaagtaagaaagtaaaattatt 828  Q
    ||||||||||||||||||  ||||  |||||||||| ||| |   | || ||| ||||| ||||| |||||||||   ||| | ||||||||||||||||    
T  24428618 ggtataaatttatatccggttaccctaaataataaacattgaattaccctaaacaaattcagttgccgaaaattagtataaattagaaagtaaaattatt 24428717  T
Q  829 aatacatgatggataaatttatttatattggtttgatacttctgctctcaataacaattatggtgaaaactttttcaacattaaaagtttttaagacaat 928  Q
    | |||||||| |||||||||||||||||||||||||| |||| | ||| ||| ||| || | | |||||||||||  ||| ||||| || ||||||||||    
T  24428718 actacatgattgataaatttatttatattggtttgatccttcggatcttaatcaca-ttgtagagaaaactttttgtacagtaaaaattattaagacaat 24428816  T
Q  929 agtcataaaca---aattaaatggacattcagtttcttgcaaataatctatttgtttacatcggaagaaacattattaatctatttagtaa 1016  Q
    |||||||||||   ||||||||||||||| ||||||||| |||||| ||||||||| |||| | || | ||||||||||||||||||||||    
T  24428817 agtcataaacaacaaattaaatggacattgagtttcttgaaaataacctatttgttaacattgaaaaagacattattaatctatttagtaa 24428907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 680 - 936
Target Start/End: Complemental strand, 22956766 - 22956511
Alignment:
Q  680 aaggggtagccttggctaccccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataataaatattaagccatccca 779  Q
    ||||||||| ||||||||||| ||||||   |||||||||  ||| ||||||||  || |||||||  ||||| ||||||||||| ||| ||| | ||||    
T  22956766 aaggggtagtcttggctacccaaaaaaaataattattcttgtattagttggtatgtatctatatccagctaccccaaataataaaaattgagctacccca 22956667  T
Q  780 aataaatttagttgtcgaaaattaacttaagtaagaaagtaaaattattaatacatgatggataaatttatttatattggtttgatacttctgctctcaa 879  Q
    || || |||||||| | ||||| ||| ||| |||||||||| ||  |||| ||||| || |||| |||||||| |||||||||| |||||| ||||||||    
T  22956666 aacaagtttagttgccaaaaat-aacataaataagaaagtagaaaaattattacatcattgatagatttatttgtattggtttggtacttccgctctcaa 22956568  T
Q  880 taacaattatggtgaaaactttttcaacattaaaagtttttaagacaatagtcataa 936  Q
    |||||||||| | || ||||||||||||| |||||  | | ||||||||||||||||    
T  22956567 taacaattatagagagaactttttcaacaataaaaactatcaagacaatagtcataa 22956511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 680 - 936
Target Start/End: Original strand, 23831626 - 23831881
Alignment:
Q  680 aaggggtagccttggctaccccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataataaatattaagccatccca 779  Q
    ||||||||| ||||||||||| ||||||   |||||||||  ||| ||||||||  || |||||||  ||||| ||||||||||| ||| ||| | ||||    
T  23831626 aaggggtagtcttggctacccaaaaaaaataattattcttgtattagttggtatgtatctatatccagctaccccaaataataaaaattgagctacccca 23831725  T
Q  780 aataaatttagttgtcgaaaattaacttaagtaagaaagtaaaattattaatacatgatggataaatttatttatattggtttgatacttctgctctcaa 879  Q
    || || |||||||| | ||||| ||| ||| |||||||||| ||  |||| ||||| || |||| |||||||| |||||||||| |||||| ||||||||    
T  23831726 aacaagtttagttgccaaaaat-aacataaataagaaagtagaaaaattattacatcattgatagatttatttgtattggtttggtacttccgctctcaa 23831824  T
Q  880 taacaattatggtgaaaactttttcaacattaaaagtttttaagacaatagtcataa 936  Q
    |||||||||| | || ||||||||||||| |||||  | | ||||||||||||||||    
T  23831825 taacaattatagagagaactttttcaacaataaaaactatcaagacaatagtcataa 23831881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 661 - 805
Target Start/End: Complemental strand, 1780884 - 1780740
Alignment:
Q  661 ggcgtagcctttccttgtcaaggggtagccttggctaccccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataa 760  Q
    |||| |||| ||| ||| |||||||||||||||||||||||||||||||||||| |||| |||  |||||| |||||| |||| || ||||| || ||||    
T  1780884 ggcgcagcccttcattgacaaggggtagccttggctaccccaaaaaatatattaatctttaatgagttggtgtaaattaatattcggctaccccatataa 1780785  T
Q  761 taaatattaagccatcccaaataaatttagttgtcgaaaattaac 805  Q
    |||| ||| ||| | |||||| ||||| |||||||||||||||||    
T  1780784 taaacattgagctaccccaaacaaattcagttgtcgaaaattaac 1780740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 932 - 1020
Target Start/End: Complemental strand, 1780740 - 1780651
Alignment:
Q  932 cataaacaaattaaatggacattcagtttcttgcaaataatctatttg-tttacatcggaagaaacattattaatctatttagtaaacgg 1020  Q
    ||||||||||||||||||||||| |||||||||||||||| | ||||| ||||||| |||| | ||||||||||||||||||||||||||    
T  1780740 cataaacaaattaaatggacattgagtttcttgcaaataaccaatttgttttacattggaaaagacattattaatctatttagtaaacgg 1780651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 682 - 936
Target Start/End: Complemental strand, 31216609 - 31216353
Alignment:
Q  682 ggggtagccttggctaccccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataataaatattaagccatcccaaa 781  Q
    ||||||||||||||| ||| |||||| | | |||||||  | | |||||| |  || ||||||||||||||  |||||| ||||||| ||  | | ||||    
T  31216609 ggggtagccttggctgcccaaaaaaaaaaaatattcttatagtagttggtttgtatatatatccgactaccctaaataaaaaatattgagatacctcaaa 31216510  T
Q  782 taa-atttagttgtcgaaaattaacttaagtaagaaagtaaaattattaatacatgatggataaatttatttatattgg-tttgatacttctgctctcaa 879  Q
     ||  ||||||||||||||||||   ||| |||||||||||||  |||| |||||||| |||| |||||||| |||||| ||||||||||| | | | ||    
T  31216509 caagttttagttgtcgaaaattagtataaataagaaagtaaaaaaattattacatgattgatagatttatttgtattggttttgatacttccggttttaa 31216410  T
Q  880 taacaattatggtgaaaactttttcaacattaaaagtttttaagacaatagtcataa 936  Q
    ||| |||||| | |||||||||||| ||| |||||  | | ||||||||||||||||    
T  31216409 taataattatagagaaaactttttccacactaaaaactatcaagacaatagtcataa 31216353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 893 - 1010
Target Start/End: Complemental strand, 29363648 - 29363531
Alignment:
Q  893 gaaaactttttcaacattaaaagtttttaagacaatagtcataaacaaattaaatggacattcagtttcttgcaaataatctatttgtttacatcggaag 992  Q
    |||| ||||||||||| ||||| |  | ||||||||||||||| |||||||||||| ||| | |||||||||||||||| |||||| |||||||  |||     
T  29363648 gaaacctttttcaacaataaaaatgatcaagacaatagtcatagacaaattaaatgtacaatgagtttcttgcaaataacctatttatttacatttgaaa 29363549  T
Q  993 aaacattattaatctatt 1010  Q
    | ||||||||||||||||    
T  29363548 agacattattaatctatt 29363531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 682 - 819
Target Start/End: Original strand, 33224522 - 33224659
Alignment:
Q  682 ggggtagccttggctaccccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataataaatattaagccatcccaaa 781  Q
    ||||||||| | |||||||||||| | | | ||||||| |||||||||||||| ||||||||    ||||| ||||||||||||||| ||| | || |||    
T  33224522 ggggtagcccttgctaccccaaaataaaaaatattcttaaattggttggtatatatttatatttagctaccccaaataataaatattgagctaccctaaa 33224621  T
Q  782 taaatttagttgtcgaaaattaacttaagtaagaaagt 819  Q
     || ||| |||||||||||||||| ||| |||||||||    
T  33224622 caagtttggttgtcgaaaattaacataaataagaaagt 33224659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 682 - 817
Target Start/End: Complemental strand, 904352 - 904216
Alignment:
Q  682 ggggtagccttggctaccccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataataaatattaagccatcccaaa 781  Q
    ||||||||||| |||||||||||||||| ||||||||| ||||||||| |||||| ||| ||    ||||| ||||||||||||||| ||| | ||||||    
T  904352 ggggtagcctttgctaccccaaaaaataaattattcttgaattggttgatataaaattacatttagctaccccaaataataaatattgagctaccccaaa 904253  T
Q  782 taaatttag-ttgtcgaaaattaacttaagtaagaaa 817  Q
    |||| || | ||| ||||||||| | ||| |||||||    
T  904252 taaacttggtttgccgaaaattagcataaataagaaa 904216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 854 - 1010
Target Start/End: Original strand, 34729779 - 34729935
Alignment:
Q  854 tattggtttgatacttctgctctcaataacaattatggtgaaaactttttcaacattaaaagtttttaagacaatagtcataaacaaattaaatggacat 953  Q
    |||||||||||||||||   ||||||||||||  ||   |||||||||||||||| ||||| |  | | ||||||||||||| |||| ||||||| |||     
T  34729779 tattggtttgatacttcccgtctcaataacaacaataacgaaaactttttcaacaataaaaatgatcatgacaatagtcatagacaagttaaatgtacaa 34729878  T
Q  954 tcagtttcttgcaaataatctatttgtttacatcggaagaaacattattaatctatt 1010  Q
    | |||||||||||||||| |||||| || ||||   || | ||||||||||||||||    
T  34729879 tgagtttcttgcaaataacctatttattaacatttaaaaagacattattaatctatt 34729935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 779 - 908
Target Start/End: Original strand, 27673916 - 27674044
Alignment:
Q  779 aaataaatttagttgtcgaaaattaacttaagtaagaaagtaaaattattaatacatgatggataaatttatttatattggtttgatacttctgctctca 878  Q
    ||||||||||||||| | ||||||| | ||| ||| |||||||||  |||| ||||  || |||| |||||||| ||||||||||||||||  | |||||    
T  27673916 aaataaatttagttg-caaaaattagcataaataataaagtaaaaaaattactacaaaattgatatatttatttgtattggtttgatactttcggtctca 27674014  T
Q  879 ataacaattatggtgaaaactttttcaaca 908  Q
    |||||||| || | |||| |||||||||||    
T  27674015 ataacaataatagagaaacctttttcaaca 27674044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 682 - 819
Target Start/End: Complemental strand, 8560222 - 8560084
Alignment:
Q  682 ggggtagccttggctaccccaaaaaatatattattcttcaattg-gttggtataaatttatatccgactacctcaaataataaatattaagccatcccaa 780  Q
    ||||||||| | |||||||||||| | | | ||||||| ||||  ||||||||| ||||||||    | ||| ||||||||||||||| ||| | |||||    
T  8560222 ggggtagcccttgctaccccaaaagaaaaaatattcttgaattttgttggtatatatttatatttagccaccccaaataataaatattgagctaccccaa 8560123  T
Q  781 ataaatttagttgtcgaaaattaacttaagtaagaaagt 819  Q
    |||| ||| |||| ||||||||||| ||| |||||||||    
T  8560122 ataagtttggttgccgaaaattaacataaataagaaagt 8560084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 681 - 719
Target Start/End: Original strand, 27673842 - 27673880
Alignment:
Q  681 aggggtagccttggctaccccaaaaaatatattattctt 719  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  27673842 aggggtagccttggctaccccaaaaaaaatattattctt 27673880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 136; Significance: 2e-70; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 682 - 1018
Target Start/End: Original strand, 21790525 - 21790861
Alignment:
Q  682 ggggtagccttggctaccccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataataaatattaagccatcccaaa 781  Q
    |||||||||| || || |||||||||||||||||||||||| | |||| ||||||||||||| | ||||||  |||||||||||||| ||||| |  |||    
T  21790525 ggggtagcct-ggttatcccaaaaaatatattattcttcaaatagttgttataaatttatattcaactaccctaaataataaatattgagccaccataaa 21790623  T
Q  782 taaatttagttgtcgaaaattaacttaagtaagaaagtaaaattattaatacatgatggataaatttatttatattggtttgatacttctgctctcaata 881  Q
    |||||| ||||| ||||||||||| ||| ||||||| | ||| ||||| |||||||| ||| ||||||||||||||||||||||||||| | ||||||||    
T  21790624 taaattcagttgccgaaaattaacataaataagaaatttaaaatattactacatgattgattaatttatttatattggtttgatacttccggtctcaata 21790723  T
Q  882 acaattatggtgaaaactttttcaacattaaaagtttttaagacaatagtcataaacaaattaaatggacattcag--tttcttgcaaataatctatttg 979  Q
     ||||||| | ||||||||||| |||  ||||| || ||||||| |||||||||||||||| ||||||||| | ||  ||| |||||||||| ||||||     
T  21790724 gcaattatagagaaaactttttaaacggtaaaaattattaagactatagtcataaacaaataaaatggacaatgagttttttttgcaaataacctattta 21790823  T
Q  980 tttacatcggaagaaacattattaatctatttagtaaac 1018  Q
    ||||| | |||| | |||||||||||||| |||||||||    
T  21790824 tttac-ttggaaaagacattattaatctagttagtaaac 21790861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 694 - 1009
Target Start/End: Original strand, 52628054 - 52628371
Alignment:
Q  694 gctaccccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataataaatattaagccatcccaaataaatttagttg 793  Q
    ||||||||||||||   ||||||||||||| ||| |||||  ||||||||||| ||||||||||||||||| ||| ||| | |||||| || || | |||    
T  52628054 gctaccccaaaaaaataattattcttcaatcggtcggtatgtatttatatccggctacctcaaataataaacattgagctaccccaaacaagttcaattg 52628153  T
Q  794 tcgaaaattaacttaagtaagaaagtaaaattattaatacatgatggataaatttatttatat--tggtttgatacttctgctctcaataacaattatgg 891  Q
    | |||||||||  ||| |||||| |||||| ||||| |||||||| |||| || ||| |||||  |||||||||||||    ||| |||||||||||| |    
T  52628154 ttgaaaattaagataaataagaaggtaaaaatattattacatgattgatatatatatatatatattggtttgatactttcagtcttaataacaattatag 52628253  T
Q  892 tgaaaactttttcaacattaaaagtttttaagacaatagtcataaacaaattaaatggacattcagtttcttgcaaataatctatttgtttacatcggaa 991  Q
     ||||||||| |||||| ||||| || | ||||||||||||||||| |||||||||| ||| | ||||| |||||||||| ||||| |||||||| ||||    
T  52628254 agaaaactttgtcaacaataaaaattatcaagacaatagtcataaataaattaaatgaacaatgagtttattgcaaataacctattagtttacattggaa 52628353  T
Q  992 gaaacattattaatctat 1009  Q
     | | |||||||||||||    
T  52628354 aatatattattaatctat 52628371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 699 - 1009
Target Start/End: Complemental strand, 54166264 - 54165954
Alignment:
Q  699 cccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataataaatattaagccatcccaaataaatttagttgtcgaa 798  Q
    ||||||||| | ||||||||||||| ||| ||||   |||| |||||  ||| | ||||||||||| ||| ||| | | |||| || || ||||||| ||    
T  54166264 cccaaaaaaaaaattattcttcaatcggtcggtaagtatttttatccagctatcccaaataataaacattgagctacctcaaacaagttcagttgtctaa 54166165  T
Q  799 aattaacttaagtaagaaagtaaaattattaatacatgatggataaatttatttatattggtttgatacttctgctctcaataacaattatggtgaaaac 898  Q
    |||||   ||| ||||||||||||| ||||| |||||||| |||| ||||  |||||||||||||||||||    | |||||||||||||| |  |||||    
T  54166164 aattaggataaataagaaagtaaaaatattactacatgattgatagattttattatattggtttgatactttcagtttcaataacaattatagataaaac 54166065  T
Q  899 tttttcaacattaaaagtttttaagacaatagtcataaacaaattaaatggacattcagtttcttgcaaataatctatttgtttacatcggaagaaacat 998  Q
    |||||||||| ||||| || | ||||||||| ||||||| |||||||||||||| | ||||| |||||||||| ||||| |||||||| | || | ||||    
T  54166064 tttttcaacaataaaaattatcaagacaatattcataaataaattaaatggacaatgagtttattgcaaataacctattagtttacattgaaaaatacat 54165965  T
Q  999 tattaatctat 1009  Q
    |||||||||||    
T  54165964 tattaatctat 54165954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 681 - 986
Target Start/End: Original strand, 48861760 - 48862063
Alignment:
Q  681 aggggtagccttggctaccccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataataaatattaagccatcccaa 780  Q
    |||||||||||||||||||||||||||  |||||||||| ||||  | |||||| |||||||| || ||||| ||||||||||| ||||||| | |||||    
T  48861760 aggggtagccttggctaccccaaaaaaagtattattcttgaattaatcggtatatatttatattcggctaccccaaataataaacattaagctaccccaa 48861859  T
Q  781 ataaatttagttgtcgaaaattaacttaagtaagaaagtaaaattattaatacatgatggataaatttatttatattggtttgatacttctgctctcaat 880  Q
    |||| |||||||| | ||||||| | ||| ||| |||||||||  | || |||| ||| |||| |||||||| ||||||||||||| ||  | |||||||    
T  48861860 ataagtttagttg-caaaaattagcataaataataaagtaaaa-aactactacaagattgatagatttatttgtattggtttgatattttcggtctcaat 48861957  T
Q  881 aacaattatggtgaaaactttttcaacattaaaagtttttaagacaatagtcataaacaaattaaatggacattcagtttcttgcaaataatctatttgt 980  Q
    |||||  ||   |||| |||||||||||  |||| || | |||||||||||| || ||||||||||  |||| | ||||||||||||||||  ||||| |    
T  48861958 aacaacaataaagaaacctttttcaacaacaaaaattatcaagacaatagtcgtagacaaattaaacagacaatgagtttcttgcaaataacatatttat 48862057  T
Q  981 ttacat 986  Q
    ||||||    
T  48862058 ttacat 48862063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 661 - 799
Target Start/End: Original strand, 22785884 - 22786022
Alignment:
Q  661 ggcgtagcctttccttgtcaaggggtagccttggctaccccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataa 760  Q
    ||||||||| ||| ||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| | || ||||| |||||||    
T  22785884 ggcgtagcccttcattggcaaggggtagccttggctaccccaaaaaatatattaatctttaattggttggtataaatttattttcggctaccccaaataa 22785983  T
Q  761 taaatattaagccatcccaaataaatttagttgtcgaaa 799  Q
    |||| ||| ||| | |||||| ||||| |||||||||||    
T  22785984 taaacattgagctaccccaaacaaattcagttgtcgaaa 22786022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 78; E-Value: 9e-36
Query Start/End: Original strand, 681 - 1010
Target Start/End: Complemental strand, 8746028 - 8745700
Alignment:
Q  681 aggggtagccttggctaccccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataataaatattaagccatcccaa 780  Q
    |||||||||||||||||||||| |||| ||||||| ||| || |||| |||||  | ||||||| | ||||||||||||||||| ||| ||| |  ||||    
T  8746028 aggggtagccttggctaccccagaaaaaatattatacttaaagtggtcggtatgtacttatatctggctacctcaaataataaacattgagctactccaa 8745929  T
Q  781 ataaatttagttgtcgaaaattaacttaagtaagaaagtaaaattattaatacatgatggataaatttatttatattggtttgatacttctgctctcaat 880  Q
    |||| ||  ||   | |||||| || ||| ||| |||||||||  | ||  ||| ||  |||| |||||||| ||||||||||||||| | | |||||||    
T  8745928 ataagttccgtca-caaaaatttacataaataataaagtaaaaaaaataccacaagactgatagatttatttgtattggtttgatactcccgatctcaat 8745830  T
Q  881 aacaattatggtgaaaactttttcaacattaaaagtttttaagacaatagtcataaacaaattaaatggacattcagtttcttgcaaataatctatttgt 980  Q
    |||||  || | |||  ||||||||||| ||||| || | ||||||||| ||||| |||||||||||||||| | |||||||| | ||||| |||||| |    
T  8745829 aacaacaatagagaagcctttttcaacaataaaaattatcaagacaatattcatagacaaattaaatggacaatgagtttcttacgaataacctatttat 8745730  T
Q  981 ttacatcggaagaaacattattaatctatt 1010  Q
    ||||||  ||| | ||||||||||||||||    
T  8745729 ttacatttgaaaagacattattaatctatt 8745700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 688 - 1010
Target Start/End: Original strand, 48840949 - 48841262
Alignment:
Q  688 gccttggctaccccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataataaatattaagccatcccaaataaatt 787  Q
    |||||||||||||||||||| | ||||||||| |||| || |||||  ||||||||||| |||||  |||||||||| ||| ||| | |||||| |  ||    
T  48840949 gccttggctaccccaaaaaaaa-attattctttaattcgtcggtatgtatttatatccggctaccctaaataataaacattgagctaccccaaacacgtt 48841047  T
Q  788 tagttgtcgaaaattaacttaagtaagaaagtaaaattattaatacatgatggataaatttatttatattggtttgatacttctgctctcaataacaatt 887  Q
       ||||  ||||||| | ||| ||| |||||||||   ||| |||| ||| |||  |||||||| ||||||||||||||||| | ||||||||||||      
T  48841048 ccattgta-aaaattagcataaataataaagtaaaaaagttactacaagattgatggatttatttgtattggtttgatacttccgatctcaataacaa-- 48841144  T
Q  888 atggtgaaaactttttcaacattaaaagtttttaagacaatagtcataaacaaattaaatggacattcagtttcttgcaaataatctatttgtttacatc 987  Q
       | |||| ||||||||||| ||||| || | |||||||  |||||| |||||||||||||| | |  ||||||||||||||| |||||| |||||||     
T  48841145 ---gagaaacctttttcaacaataaaaattatcaagacaa--gtcatagacaaattaaatggataatgggtttcttgcaaataacctatttatttacatt 48841239  T
Q  988 ggaagaaacattattaatctatt 1010  Q
     ||| | ||||||||||||||||    
T  48841240 tgaaaagacattattaatctatt 48841262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 666 - 799
Target Start/End: Complemental strand, 6017046 - 6016913
Alignment:
Q  666 agcctttccttgtcaaggggtagccttggctaccccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataataaat 765  Q
    |||| ||| ||| |||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||| |  | ||||| |||||||||||     
T  6017046 agcccttcattggcaaggggtagccttggctaccccaaaaattatattaatctttaattggttggtataaatttatttttggctaccccaaataataaac 6016947  T
Q  766 attaagccatcccaaataaatttagttgtcgaaa 799  Q
    ||| ||| | |||||| ||||| |||||||||||    
T  6016946 attgagctaccccaaacaaattcagttgtcgaaa 6016913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 679 - 799
Target Start/End: Original strand, 2407029 - 2407149
Alignment:
Q  679 caaggggtagccttggctaccccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataataaatattaagccatccc 778  Q
    ||||||||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||| | |  ||||| ||||||||||| ||| ||| | |||    
T  2407029 caaggggtagccttggctacctcaaaaaatatattaatctttaattggttggtataaatttattttcagctaccccaaataataaacattgagctacccc 2407128  T
Q  779 aaataaatttagttgtcgaaa 799  Q
    || |||||| |||||||||||    
T  2407129 aactaaattcagttgtcgaaa 2407149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 932 - 1020
Target Start/End: Original strand, 22786028 - 22786116
Alignment:
Q  932 cataaacaaattaaatggacattcagtttcttgcaaataatctatttgtttacatcggaagaaacattattaatctatttagtaaacgg 1020  Q
    ||||||||| ||||||||||||| | |||||||||||||| |||||||||||||| |||| | ||||||||||||||||||||||||||    
T  22786028 cataaacaatttaaatggacattgaatttcttgcaaataacctatttgtttacattggaaaagacattattaatctatttagtaaacgg 22786116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 932 - 1020
Target Start/End: Original strand, 2407155 - 2407244
Alignment:
Q  932 cataaacaaattaaatggacattcagtttcttgcaaataatctatttgtttacatcggaagaa-acattattaatctatttagtaaacgg 1020  Q
    ||||||||| ||||||||||||| | |||||||||||||| |||||||||||||| |||| || ||||||||||||||||||||||||||    
T  2407155 cataaacaatttaaatggacattgaatttcttgcaaataacctatttgtttacattggaaaaagacattattaatctatttagtaaacgg 2407244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 932 - 1020
Target Start/End: Complemental strand, 6016907 - 6016819
Alignment:
Q  932 cataaacaaattaaatggacattcagtttcttgcaaataatctatttgtttacatcggaagaaacattattaatctatttagtaaacgg 1020  Q
    ||||||||| ||||||| ||||| |||||||||||||||| |||||||||||||| | || | ||||||||||||||||||||||||||    
T  6016907 cataaacaatttaaatgtacattgagtttcttgcaaataacctatttgtttacattgaaaaagacattattaatctatttagtaaacgg 6016819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 854 - 986
Target Start/End: Complemental strand, 43892664 - 43892532
Alignment:
Q  854 tattggtttgatacttctgctctcaataacaattatggtgaaaactttttcaacattaaaagtttttaagacaatagtcataaacaaattaaatggacat 953  Q
    |||||||||||||||||   ||||||||||||  ||   |||| ||||||||||| ||||| |  | ||||||||||||||| ||||||||||||  ||     
T  43892664 tattggtttgatacttcccgtctcaataacaacaataaagaaacctttttcaacaataaaaataatcaagacaatagtcatagacaaattaaatgtgcaa 43892565  T
Q  954 tcagtttcttgcaaataatctatttgtttacat 986  Q
    | |||||||||||||||| |||||| |||||||    
T  43892564 tgagtttcttgcaaataacctatttatttacat 43892532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 776 - 869
Target Start/End: Complemental strand, 856921 - 856828
Alignment:
Q  776 cccaaataaatttagttgtcgaaaattaacttaagtaagaaagtaaaattattaatacatgatggataaatttatttatattggtttgatactt 869  Q
    |||||| || || |||||||||||||||   ||| ||||||||||||| ||||| |||||||| | || |||||||||||||||||||||||||    
T  856921 cccaaacaagttcagttgtcgaaaattatgataaataagaaagtaaaaatattactacatgattggtagatttatttatattggtttgatactt 856828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 682 - 863
Target Start/End: Complemental strand, 16608706 - 16608526
Alignment:
Q  682 ggggtagccttggctaccccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataataaatattaagccatcccaaa 781  Q
    ||||||||| | |||||||||||| | | | ||||| | |||||||||||||| ||||||||    ||||| ||||||||||||||| ||| | ||||||    
T  16608706 ggggtagcccttgctaccccaaaagaaaaaatattcatgaattggttggtatatatttatatttagctaccccaaataataaatattgagctaccccaaa 16608607  T
Q  782 taaatttagttgtcgaaaattaacttaagtaagaaagtaaaattattaatacatgatggataaatttatttatattggtttg 863  Q
     || ||| |||  ||||||||||| ||| ||||||||| |||  | || ||||| || |||| |||||||| ||||||||||    
T  16608606 aaagtttggttaccgaaaattaacataaataagaaagtgaaa-aagtactacatcattgatagatttatttgtattggtttg 16608526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 739 - 931
Target Start/End: Complemental strand, 17816237 - 17816045
Alignment:
Q  739 tatatccgactacctcaaataataaatattaagccatcccaaataaatttagttgtcgaaaattaacttaagtaagaaagtaaaattattaatacatgat 838  Q
    |||||||||||| | |||||||||||| || ||| || | |||||| |||||||||  ||||||| | ||| | |||||||||||   ||| |||||| |    
T  17816237 tatatccgactatcccaaataataaattttgagctattctaaataagtttagttgtaaaaaattagcataaatgagaaagtaaaaaagttactacatgtt 17816138  T
Q  839 ggataaatttatttatattggtttgatacttctgctctcaataacaattatggtgaaaactttttcaacattaaaagtttttaagacaatagt 931  Q
     |||| |||||| | |||||||||| ||||||   ||| |||||||| ||| | |||||||| ||||||| ||||| || | |||||| ||||    
T  17816137 tgatagatttatatgtattggtttggtacttccaatcttaataacaactatagagaaaacttattcaacaataaaaattatcaagacagtagt 17816045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 684 - 817
Target Start/End: Complemental strand, 8762955 - 8762822
Alignment:
Q  684 ggtagccttggctaccccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataataaatattaagccatcccaaata 783  Q
    ||||||| ||||||||||||||||  |||| ||||| |||  |||||||||  |||||||    ||||| ||||||| ||||||| ||| | ||||||||    
T  8762955 ggtagccatggctaccccaaaaaaagtattgttcttgaatatgttggtatatttttatatttagctaccccaaataaaaaatatttagctaccccaaata 8762856  T
Q  784 aatttagttgtcgaaaattaacttaagtaagaaa 817  Q
    |||||| ||||  ||||||||| ||| |||||||    
T  8762855 aatttatttgttaaaaattaacataaataagaaa 8762822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 752 - 817
Target Start/End: Complemental strand, 5476659 - 5476594
Alignment:
Q  752 ctcaaataataaatattaagccatcccaaataaatttagttgtcgaaaattaacttaagtaagaaa 817  Q
    ||||||||| ||||||| ||| | |||||||||||||| ||||  ||||||||| ||| |||||||    
T  5476659 ctcaaataaaaaatatttagctaccccaaataaatttatttgttaaaaattaacataaataagaaa 5476594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 128; Significance: 1e-65; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 691 - 1018
Target Start/End: Complemental strand, 428667 - 428342
Alignment:
Q  691 ttggctaccccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataataaatattaagccatcccaaataaatttag 790  Q
    ||||||||||||||| ||||| | |||||||||| | ||||||| | ||||||||  ||||||||||||||||| ||| ||| | || ||||||||| ||    
T  428667 ttggctaccccaaaatatatacttttcttcaatttgctggtatataattatatccagctacctcaaataataaacattgagctaccctaaataaattcag 428568  T
Q  791 ttgtcgaaaattaacttaagtaagaaagtaaaattattaatacatgatggataaatttatttatattggtttgatacttctgctctcaataacaattatg 890  Q
    ||||| ||||||||  ||| ||| ||||||||| ||| |||||||||| |||  |||||||||| |||||||||| |||    ||||||||| | ||||     
T  428567 ttgtcaaaaattaatataaataataaagtaaaaatatcaatacatgattgatggatttatttattttggtttgatgcttaccgtctcaataatagttata 428468  T
Q  891 gtgaaaactttttcaacattaaaagtttttaagacaatagtcataaacaaattaaatggacattcagtttcttgcaaataatctatttgtttacatcgga 990  Q
    | |||||| ||||||||  ||||| || ||||||||||||| |||||||||||||||||||| | |||||||| ||||||||||||||| |||||| |||    
T  428467 gagaaaac-ttttcaacggtaaaaattattaagacaatagtaataaacaaattaaatggacaat-agtttcttacaaataatctatttgcttacattgga 428370  T
Q  991 agaaacattattaatctatttagtaaac 1018  Q
    | | ||||||||||||||||||||||||    
T  428369 aaatacattattaatctatttagtaaac 428342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 123; Significance: 1e-62; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 679 - 953
Target Start/End: Original strand, 32415666 - 32415940
Alignment:
Q  679 caaggggtagccttggctaccccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataataaatattaagccatccc 778  Q
    ||||||||| | |||||||||| ||||||||||||||||||||||||||||||||||| ||||||| | | |||| |||||||||| ||| ||  | |||    
T  32415666 caaggggtaactttggctacccaaaaaaatatattattcttcaattggttggtataaacttatatctggcaaccttaaataataaacattgagttacccc 32415765  T
Q  779 aaataaatttagttgtcgaaaattaacttaagtaagaaagtaaaattattaatacatgatggataaatttatttatattggtttgatacttctgctctca 878  Q
    ||||||||| ||||||| ||||||||  ||| ||||||||||||| ||||| ||||| || |||| |||||||||||||||||||||||||| | |||||    
T  32415766 aaataaattaagttgtcaaaaattaatataaataagaaagtaaaaatattactacatcattgatagatttatttatattggtttgatacttccggtctca 32415865  T
Q  879 ataacaattatggtgaaaactttttcaacattaaaagtttttaagacaatagtcataaacaaattaaatggacat 953  Q
    |||||||||||   |||||| |||||   | ||| | || ||||||||||| ||||||||||||||||| |||||    
T  32415866 ataacaattatatagaaaaccttttcggtagtaacaattattaagacaataatcataaacaaattaaattgacat 32415940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 85; E-Value: 6e-40
Query Start/End: Original strand, 680 - 936
Target Start/End: Complemental strand, 6115261 - 6115005
Alignment:
Q  680 aaggggtagccttggctaccccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataataaatattaagccatccca 779  Q
    |||||||||||||||||||||||||||| |||||||||||  ||| ||||||||  || |||||||  |||||  |||||||||| ||| | | | ||||    
T  6115261 aaggggtagccttggctaccccaaaaaaaatattattcttgtattagttggtatgtatctatatccagctaccataaataataaacattgaactacccca 6115162  T
Q  780 aataaatttagttgtcgaaaattaacttaagtaagaaagtaaaattattaatacatgatggataaatttatttatattggtttgatacttctgctctcaa 879  Q
    || || || ||||| | |||| |||| ||| |||||||||||||  |||| ||||| || |||| |||||||| |||||||||| |||||||| ||||||    
T  6115161 aacaagttcagttgccaaaaaataacataaataagaaagtaaaaaaattattacatcattgatagatttatttgtattggtttggtacttctgatctcaa 6115062  T
Q  880 taacaattatggtgaaaactttttcaacattaaaagtttttaagacaatagtcataa 936  Q
    |||||||||| | || |||||||| |||| |||||  | | |||||| |||||||||    
T  6115061 taacaattatagagagaacttttttaacaataaaaactatcaagacagtagtcataa 6115005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 776 - 1011
Target Start/End: Complemental strand, 13541653 - 13541419
Alignment:
Q  776 cccaaataaatttagttgtcgaaaattaacttaagtaagaaagtaaaattattaatacatgatggataaatttatttatattggtttgatacttctgctc 875  Q
    |||||||||||||||||| | ||||||| | ||| ||| |||||||||  |||| || | ||| |||| |||||||| ||||||||||||||||  | ||    
T  13541653 cccaaataaatttagttg-caaaaattagcataaataataaagtaaaaaaattactataagattgatatatttatttgtattggtttgatactttcggtc 13541555  T
Q  876 tcaataacaattatggtgaaaactttttcaacattaaaagtttttaagacaatagtcataaacaaattaaatggacattcagtttcttgcaaataatcta 975  Q
    | ||||||||  || | |||| ||||||||||| ||||| || | ||||||||||||||| | |||||||||||||| | |||||||||||||||| |||    
T  13541554 ttaataacaacaatagagaaatctttttcaacaataaaaattatcaagacaatagtcatagataaattaaatggacaatgagtttcttgcaaataaccta 13541455  T
Q  976 tttgtttacatcggaagaaacattattaatctattt 1011  Q
    ||| |||||||  ||| | | |||||||||||||||    
T  13541454 tttatttacatttgaaaagatattattaatctattt 13541419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 776 - 1011
Target Start/End: Original strand, 13682820 - 13683054
Alignment:
Q  776 cccaaataaatttagttgtcgaaaattaacttaagtaagaaagtaaaattattaatacatgatggataaatttatttatattggtttgatacttctgctc 875  Q
    |||||||||||||||||| | ||||||| | ||| ||| |||||||||  |||| || | ||| |||| |||||||| ||||||||||||||||  | ||    
T  13682820 cccaaataaatttagttg-caaaaattagcataaataataaagtaaaaaaattactataagattgatatatttatttgtattggtttgatactttcggtc 13682918  T
Q  876 tcaataacaattatggtgaaaactttttcaacattaaaagtttttaagacaatagtcataaacaaattaaatggacattcagtttcttgcaaataatcta 975  Q
    | ||||||||  || | |||| ||||||||||| ||||| || | ||||||||||||||| | |||||||||||||| | |||||||||||||||| |||    
T  13682919 ttaataacaacaatagagaaatctttttcaacaataaaaattatcaagacaatagtcatagataaattaaatggacaatgagtttcttgcaaataaccta 13683018  T
Q  976 tttgtttacatcggaagaaacattattaatctattt 1011  Q
    ||| |||||||  ||| | | |||||||||||||||    
T  13683019 tttatttacatttgaaaagatattattaatctattt 13683054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 754 - 1009
Target Start/End: Complemental strand, 38173038 - 38172793
Alignment:
Q  754 caaataataaatattaagccatcccaaataaatttagttgtcgaaaattaacttaagtaagaaagtaaaattattaatacatgatggataaatttattta 853  Q
    ||||||||||| ||| ||| | |||||| || || | |||| |||||||||  ||| ||||||||||||| ||||| ||||||||          || ||    
T  38173038 caaataataaacattgagctaccccaaacaagttcaattgttgaaaattaagataaataagaaagtaaaaatattattacatgat----------atata 38172949  T
Q  854 tattggtttgatacttctgctctcaataacaattatggtgaaaactttttcaacattaaaagtttttaagacaatagtcataaacaaattaaatggacat 953  Q
    ||||||||||||||||    ||| |||||||||||| | ||||||||| |||||| ||||| || | |||||||||||||||||||||||||||| |||     
T  38172948 tattggtttgatactttcagtcttaataacaattatagagaaaactttgtcaacaataaaaattatcaagacaatagtcataaacaaattaaatgaacaa 38172849  T
Q  954 tcagtttcttgcaaataatctatttgtttacatcggaagaaacattattaatctat 1009  Q
    | ||||| |||||||||| ||||| |||||||| |||  | |||||||||||||||    
T  38172848 tgagtttattgcaaataacctattagtttacattggagaatacattattaatctat 38172793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 932 - 1020
Target Start/End: Original strand, 12491566 - 12491655
Alignment:
Q  932 cataaacaaattaaatggacattcagtttcttgcaaataatctatttg-tttacatcggaagaaacattattaatctatttagtaaacgg 1020  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||| |||| ||||||||||||||||||||||||||||    
T  12491566 cataaacaaattaaatggacattgagtttcttgcaaataacctatttgttttacattggaaaaaacattattaatctatttagtaaacgg 12491655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 847 - 986
Target Start/End: Original strand, 40118061 - 40118198
Alignment:
Q  847 ttatttatattggtttgatacttctgctctcaataacaattatggtgaaaactttttcaacattaaaagtttttaagacaatagtcataaacaaattaaa 946  Q
    ||||||||||||||||||||||||     |||||||||||||| |  ||||||||||||||| ||||| || | |||| |||||||||||||||||||||    
T  40118061 ttatttatattggtttgatacttccaaattcaataacaattatag--aaaactttttcaacaataaaaattatcaagataatagtcataaacaaattaaa 40118158  T
Q  947 tggacattcagtttcttgcaaataatctatttgtttacat 986  Q
    |||||| | | ||| |||||||||||||||| ||||||||    
T  40118159 tggacaatgaatttattgcaaataatctattagtttacat 40118198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 924 - 1018
Target Start/End: Original strand, 18881850 - 18881944
Alignment:
Q  924 acaatagtcataaacaaattaaatggacattcagtttcttgcaaataatctatttgtttacatcggaagaaacattattaatctatttagtaaac 1018  Q
    |||||||||||||||| ||||||||| || | |||||||||||||||| |||||||||||||| |||| ||||||||||||||||||| ||||||    
T  18881850 acaatagtcataaacatattaaatgggcaatgagtttcttgcaaataacctatttgtttacattggaaaaaacattattaatctattttgtaaac 18881944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 681 - 1010
Target Start/End: Original strand, 43114971 - 43115301
Alignment:
Q  681 aggggtagccttggctaccccaaaaaa---tatattattcttcaattggttggtataaatttatatccgactacctcaaataataaatattaagccatcc 777  Q
    |||||||||||||||||||| ||||||   || |  | |||| || |||| |||||  |||| ||||||  |||  ||||||||||||||| ||| | |     
T  43114971 aggggtagccttggctacccaaaaaaaaaataaaaaaatcttaaagtggtcggtatgtatttttatccggatactccaaataataaatattgagctacct 43115070  T
Q  778 caaataaatttagttgtcgaaaattaacttaagtaagaaagtaaaattattaatacatgatggataaatttatttatattggtttgatacttctgctctc 877  Q
    |||| |||||  |||||  ||||||| | ||| ||| |||||||||  |||| |||| ||| |||| |||||||| |||| |||||||||| | | ||||    
T  43115071 caaacaaattccgttgta-aaaattagcataaataataaagtaaaaaaattactacaagattgatagatttatttgtatttgtttgatactcccgatctc 43115169  T
Q  878 aataacaattatggtgaaaactttttcaacattaaaagtttttaagacaatagtcataaacaaattaaatggacattcagtttcttgcaaataatctatt 977  Q
    ||||||||  || | |||   |||||||||| ||||| || | ||||||||||||||  | ||| |||||||||| | ||||||||||||||||  ||||    
T  43115170 aataacaacaatagagaact-tttttcaacaataaaaattatcaagacaatagtcattgaaaaactaaatggacagtgagtttcttgcaaataacatatt 43115268  T
Q  978 tgtttacatcggaagaaacattattaatctatt 1010  Q
    | |||||||  ||| ||||||||||||||||||    
T  43115269 tatttacatttgaaaaaacattattaatctatt 43115301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 680 - 984
Target Start/End: Original strand, 41570189 - 41570493
Alignment:
Q  680 aaggggtagccttggctaccccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataataaatattaagccatccca 779  Q
    |||||||||||||||||||||||||||  ||||| ||||| | ||||| |||||  |||||||| |  ||||| ||||||||||||||| ||| | ||||    
T  41570189 aaggggtagccttggctaccccaaaaacaatatttttcttgagttggtaggtatgtatttatattcagctaccccaaataataaatattgagctacccca 41570288  T
Q  780 aataaatttagttgtcgaaaattaacttaagtaagaaagtaaaattattaatacatgatggataaatttatttatattggtttgatacttctgctctcaa 879  Q
    || || || ||||| ||||||||  | ||  ||||||||| |||  |||| |||||||| |||| |  ||| | ||||||||||  ||||  | ||| |     
T  41570289 aaaaagttcagttgccgaaaatttgcatatataagaaagttaaaaaattattacatgattgataga--tatgtgtattggtttggaactttcggtcttat 41570386  T
Q  880 taacaa--ttatggtgaaaactttttcaacattaaaagtttttaagacaatagtcataaacaaattaaatggacattcagtttcttgcaaataatctatt 977  Q
    ||||||   ||| | |||||||||||||||| ||| | || | |||  |||||||||||||| ||||||||   | | |||||||||||||||| |||||    
T  41570387 taacaactatatagagaaaactttttcaacaataacaattatcaagtaaatagtcataaacatattaaatgagtaatgagtttcttgcaaataacctatt 41570486  T
Q  978 tgtttac 984  Q
    |||||||    
T  41570487 tgtttac 41570493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 845 - 1010
Target Start/End: Complemental strand, 38699915 - 38699750
Alignment:
Q  845 atttatttatattggtttgatacttctgctctcaataacaattatggtgaaaactttttcaacattaaaagtttttaagacaatagtcataaacaaatta 944  Q
    |||||||| |||| ||||||||||   | ||||||||||||   | | ||||  |||||||||| ||||| || | ||||||||||||||  ||||||||    
T  38699915 atttatttgtatttgtttgatactctcgatctcaataacaacagtagagaaacatttttcaacaataaaaattatcaagacaatagtcatggacaaatta 38699816  T
Q  945 aatggacattcagtttcttgcaaataatctatttgtttacatcggaagaaacattattaatctatt 1010  Q
    |||||| | | |||||||||||||||| |||||| |||||||  ||| | ||||||||||||||||    
T  38699815 aatggagagtgagtttcttgcaaataacctatttatttacatttgaaaagacattattaatctatt 38699750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 854 - 986
Target Start/End: Complemental strand, 4072369 - 4072237
Alignment:
Q  854 tattggtttgatacttctgctctcaataacaattatggtgaaaactttttcaacattaaaagtttttaagacaatagtcataaacaaattaaatggacat 953  Q
    ||||||||||||||||    ||||||||||||  ||   |||||||||||||||| ||||| |  | ||||||||||||||| |||||||||||| |||     
T  4072369 tattggtttgatactttccgtctcaataacaacaataaagaaaactttttcaacaataaaaatgatcaagacaatagtcatagacaaattaaatgtacaa 4072270  T
Q  954 tcagtttcttgcaaataatctatttgtttacat 986  Q
    | |||||||||||||||| |||||| |||||||    
T  4072269 tgagtttcttgcaaataacctatttatttacat 4072237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 682 - 863
Target Start/End: Complemental strand, 13741652 - 13741472
Alignment:
Q  682 ggggtagccttggctaccccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataataaatattaagccatcccaaa 781  Q
    ||||||||| | |||||||||||| | | | ||||  | |||||||||||||| ||||||||    ||||||||||||||||||||| ||| | |||||     
T  13741652 ggggtagcccttgctaccccaaaagaaaaaatatttatgaattggttggtatatatttatatttagctacctcaaataataaatattgagctaccccaag 13741553  T
Q  782 taaatttagttgtcgaaaattaacttaagtaagaaagtaaaattattaatacatgatggataaatttatttatattggtttg 863  Q
     || ||| |||| ||||||||||| ||| ||||||||| |||  | || ||||| || |||| |||||||||||||||||||    
T  13741552 caagtttggttgccgaaaattaacataaataagaaagtgaaa-aagtactacatcattgatagatttatttatattggtttg 13741472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 854 - 986
Target Start/End: Complemental strand, 21441735 - 21441603
Alignment:
Q  854 tattggtttgatacttctgctctcaataacaattatggtgaaaactttttcaacattaaaagtttttaagacaatagtcataaacaaattaaatggacat 953  Q
    |||||||||||||||||   ||||||||||||  ||   |||| ||||||||||| ||||| |  | || |||||||||||| |||||||||||| |||     
T  21441735 tattggtttgatacttcccgtctcaataacaacaataaagaaacctttttcaacaataaaaatgatcaaaacaatagtcatagacaaattaaatgtacaa 21441636  T
Q  954 tcagtttcttgcaaataatctatttgtttacat 986  Q
    | |||||||||||||||| |||||| |||||||    
T  21441635 tgagtttcttgcaaataacctatttatttacat 21441603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 854 - 986
Target Start/End: Complemental strand, 41323323 - 41323191
Alignment:
Q  854 tattggtttgatacttctgctctcaataacaattatggtgaaaactttttcaacattaaaagtttttaagacaatagtcataaacaaattaaatggacat 953  Q
    |||||||||||||||||   ||||||||||||  ||   ||||  |||||||||| ||||| |  | ||||||||||||||| |||||||||||| |||     
T  41323323 tattggtttgatacttcccgtctcaataacaacaataaagaaacatttttcaacaataaaaatgatcaagacaatagtcatagacaaattaaatgtacaa 41323224  T
Q  954 tcagtttcttgcaaataatctatttgtttacat 986  Q
    | |||||||||||||||| |||||| |||||||    
T  41323223 tgagtttcttgcaaataaactatttatttacat 41323191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 679 - 805
Target Start/End: Original strand, 12491440 - 12491566
Alignment:
Q  679 caaggggtagccttggctaccccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataataaatattaagccatccc 778  Q
    |||||||||||||||||||| ||||||||||||||| |||| |||  ||||||  ||||| |||| || ||||| ||||||| ||| ||| |||   |||    
T  12491440 caaggggtagccttggctactccaaaaaatatattaatctttaataagttggtgcaaattaatattcggctaccccaaataacaaacattgagctgcccc 12491539  T
Q  779 aaataaatttagttgtcgaaaattaac 805  Q
    ||| ||||| ||||| |||||||||||    
T  12491540 aaacaaattcagttgccgaaaattaac 12491566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 682 - 863
Target Start/End: Complemental strand, 1233884 - 1233704
Alignment:
Q  682 ggggtagccttggctaccccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataataaatattaagccatcccaaa 781  Q
    ||||||||| | |||||||||||| | | | ||||| | |||||||||||||| ||||||||    ||||| ||||||||||||||| ||| | |||||     
T  1233884 ggggtagcccttgctaccccaaaagaaaaaatattcatgaattggttggtatatatttatatttagctaccccaaataataaatattgagctaccccaag 1233785  T
Q  782 taaatttagttgtcgaaaattaacttaagtaagaaagtaaaattattaatacatgatggataaatttatttatattggtttg 863  Q
     || ||| |||| ||||||||||| ||| ||||||||| |||  | || ||||| || |||| |||||||| ||||||||||    
T  1233784 caagtttggttgccgaaaattaacataaataagaaagtgaaa-aagtactacatcattgatagatttatttgtattggtttg 1233704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 682 - 863
Target Start/End: Complemental strand, 13641240 - 13641060
Alignment:
Q  682 ggggtagccttggctaccccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataataaatattaagccatcccaaa 781  Q
    ||||||||| | |||||||||||| | | | ||||  | |||||||||||||| ||||||||    ||||||||||||||||||||| ||| | |||||     
T  13641240 ggggtagcccttgctaccccaaaagaaaaaatatttatgaattggttggtatatatttatatttagctacctcaaataataaatattgagctaccccaag 13641141  T
Q  782 taaatttagttgtcgaaaattaacttaagtaagaaagtaaaattattaatacatgatggataaatttatttatattggtttg 863  Q
     || ||| |||| ||||||||||| ||| ||||||||| |||  | || ||||| || |||| |||||||| ||||||||||    
T  13641140 caagtttggttgccgaaaattaacataaataagaaagtgaaa-aagtactacatcattgatagatttatttgtattggtttg 13641060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 682 - 801
Target Start/End: Complemental strand, 5808971 - 5808853
Alignment:
Q  682 ggggtagccttggctaccccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataataaatattaagccatcccaaa 781  Q
    ||||||||| | |||||||||||||| | ||||||||| ||||| || ||||  |||| ||||   ||||| ||||||||||||||| ||| | ||||||    
T  5808971 ggggtagcccttgctaccccaaaaaaaa-attattctttaattgattagtatctatttgtatctagctaccccaaataataaatattgagctaccccaaa 5808873  T
Q  782 taaatttagttgtcgaaaat 801  Q
    ||||||| ||||||||||||    
T  5808872 taaatttggttgtcgaaaat 5808853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 114; Significance: 3e-57; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 114; E-Value: 3e-57
Query Start/End: Original strand, 684 - 986
Target Start/End: Complemental strand, 7225 - 6921
Alignment:
Q  684 ggtagccttggctaccccaaaaaatata--ttattcttcaattggttggtataaatttatatccgactacctcaaataataaatattaagccatcccaaa 781  Q
    |||||| |||||||| |||||||| |||  |||||||||||| ||| |||||  ||||||||||||||||| ||||||||||| ||| ||  | ||||||    
T  7225 ggtagctttggctactccaaaaaaaataaattattcttcaatcggtcggtatgtatttatatccgactaccccaaataataaacattgagttaccccaaa 7126  T
Q  782 taaatttagttgtcgaaaattaacttaagtaagaaagtaaaattattaatacatgatggataaatttatttatattggtttgatacttctgctctcaata 881  Q
     || || ||||||||||||||||  ||| ||| ||||||||| ||||| ||| |||| |||| |||||||||||||||||||||||||    |||| |||    
T  7125 caagttcagttgtcgaaaattaagataaataaaaaagtaaaaatattattacgtgattgatagatttatttatattggtttgatactttcagtctcgata 7026  T
Q  882 acaattatggtgaaaactttttcaacattaaaagtttttaagacaatagtcataaacaaattaaatggacattcagtttcttgcaaataatctatttgtt 981  Q
    |||||||| | ||||||||| |||||| ||||| || | ||||||||||||||||||| |||||||| ||| | ||||| ||||||||||  |||| |||    
T  7025 acaattatagggaaaactttgtcaacaataaaaattatcaagacaatagtcataaacagattaaatgaacaataagtttattgcaaataacatattagtt 6926  T
Q  982 tacat 986  Q
    |||||    
T  6925 tacat 6921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 94; Significance: 2e-45; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 748 - 1018
Target Start/End: Original strand, 22538 - 22812
Alignment:
Q  748 ctacctcaaataataaatattaagccatcccaaataaatttagttgtcgaaaattaacttaagtaagaaagtaaaattattaatacatgatggata---- 843  Q
    ||||||| ||||||||| ||| | | ||| ||||||| |||||||| ||||||||| | ||  ||||||||| |||  |||| |||||||| ||||        
T  22538 ctacctccaataataaacattgaactatctcaaataagtttagttgccgaaaattagcatagataagaaagttaaacaattactacatgattgatatata 22637  T
Q  844 aatttatttatattggtttgatacttctgctctcaataacaattatggtgaaaactttttcaacattaaaagtttttaagacaatagtcataaacaaatt 943  Q
    |||| |||| ||||||||||  ||||| | | ||||||||||  || | |||||||||||||| | ||||| || | ||||||||||||||||||| |||    
T  22638 aattcatttgtattggtttggaacttccggtttcaataacaacaatagagaaaactttttcaataataaaaattatcaagacaatagtcataaacatatt 22737  T
Q  944 aaatggacattcagtttcttgcaaataatctatttgtttacatcggaagaaacattattaatctatttagtaaac 1018  Q
    |||||| |||| | |||||||||||||| |||||||||||||| |||| ||||||||||||||||||| ||||||    
T  22738 aaatgggcattgaatttcttgcaaataacctatttgtttacattggaaaaaacattattaatctattttgtaaac 22812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 90; Significance: 6e-43; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 681 - 986
Target Start/End: Original strand, 16152063 - 16152366
Alignment:
Q  681 aggggtagccttggctaccccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataataaatattaagccatcccaa 780  Q
    |||||||||||||||||||||||||||  |||||||||| ||||  | |||||| ||||||||||| ||||| ||||||||||| ||| ||| | |||||    
T  16152063 aggggtagccttggctaccccaaaaaaagtattattcttgaattaatcggtatatatttatatccggctaccccaaataataaacattgagctaccccaa 16152162  T
Q  781 ataaatttagttgtcgaaaattaacttaagtaagaaagtaaaattattaatacatgatggataaatttatttatattggtttgatacttctgctctcaat 880  Q
    |||| |||||||| | ||||||| | ||| ||| |||||||||  | || |||| ||| |||| |||||||| ||||||||||||| ||  | |||||||    
T  16152163 ataagtttagttg-caaaaattagcataaataataaagtaaaa-aactactacaagattgatagatttatttgtattggtttgatattttcggtctcaat 16152260  T
Q  881 aacaattatggtgaaaactttttcaacattaaaagtttttaagacaatagtcataaacaaattaaatggacattcagtttcttgcaaataatctatttgt 980  Q
    |||||  ||   |||| |||||||||||  |||| || | |||||||||||| || ||||||||||  |||| | ||||||||||||||||  ||||| |    
T  16152261 aacaacaataaagaaacctttttcaacaacaaaaattatcaagacaatagtcgtagacaaattaaacagacaatgagtttcttgcaaataacatatttat 16152360  T
Q  981 ttacat 986  Q
    ||||||    
T  16152361 ttacat 16152366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 661 - 799
Target Start/End: Complemental strand, 20843428 - 20843290
Alignment:
Q  661 ggcgtagcctttccttgtcaaggggtagccttggctaccccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataa 760  Q
    ||||||||| ||  ||| |||||||||||||||||||||||||||||||||||| | || ||||||||||||||||||||| | || ||||| |||||||    
T  20843428 ggcgtagccctttattggcaaggggtagccttggctaccccaaaaaatatattaatatttaattggttggtataaatttattttcggctaccccaaataa 20843329  T
Q  761 taaatattaagccatcccaaataaatttagttgtcgaaa 799  Q
    |||| ||| ||| | |||||| ||||| |||||||||||    
T  20843328 taaacattgagctaccccaaacaaattcagttgtcgaaa 20843290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 932 - 1020
Target Start/End: Original strand, 40763813 - 40763902
Alignment:
Q  932 cataaacaaattaaatggacattcagtttcttgcaaataatctatttg-tttacatcggaagaaacattattaatctatttagtaaacgg 1020  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||| |||| ||||||||||||||||||||||||||||    
T  40763813 cataaacaaattaaatggacattgagtttcttgcaaataacctatttgttttacattggaaaaaacattattaatctatttagtaaacgg 40763902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 679 - 805
Target Start/End: Original strand, 40763687 - 40763813
Alignment:
Q  679 caaggggtagccttggctaccccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataataaatattaagccatccc 778  Q
    |||| ||||||||||| ||||||||||||||||||| |||| |||  |||||| |||||| |||| || ||||| ||||||||||| ||| ||| |||||    
T  40763687 caagaggtagccttggttaccccaaaaaatatattaatctttaataagttggtgtaaattaatattcggctaccccaaataataaacattgagctatccc 40763786  T
Q  779 aaataaatttagttgtcgaaaattaac 805  Q
    ||| ||||| |||||||||||||||||    
T  40763787 aaacaaattcagttgtcgaaaattaac 40763813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 932 - 1017
Target Start/End: Complemental strand, 20843284 - 20843199
Alignment:
Q  932 cataaacaaattaaatggacattcagtttcttgcaaataatctatttgtttacatcggaagaaacattattaatctatttagtaaa 1017  Q
    ||||||||| ||||||||||||| | |||||||||||||| |||||||||||||| |||| | |||||||||||||||||||||||    
T  20843284 cataaacaatttaaatggacattgaatttcttgcaaataacctatttgtttacattggaaaagacattattaatctatttagtaaa 20843199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 854 - 1010
Target Start/End: Complemental strand, 17653129 - 17652973
Alignment:
Q  854 tattggtttgatacttctgctctcaataacaattatggtgaaaactttttcaacattaaaagtttttaagacaatagtcataaacaaattaaatggacat 953  Q
    |||||||||||||||||   ||||||||||||  ||   | |||||||||||||| ||||| |  | ||||||||||||||| |||||||||||| |||     
T  17653129 tattggtttgatacttcccatctcaataacaacaataaagtaaactttttcaacaataaaaatgatcaagacaatagtcatagacaaattaaatgtacaa 17653030  T
Q  954 tcagtttcttgcaaataatctatttgtttacatcggaagaaacattattaatctatt 1010  Q
    | |||||||||||||||| |||||| || ||||  ||| | ||||||||||||||||    
T  17653029 tgagtttcttgcaaataacctatttattaacatttgaaaagacattattaatctatt 17652973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 661 - 803
Target Start/End: Complemental strand, 3458319 - 3458175
Alignment:
Q  661 ggcgtagcctttccttgtcaaggggtagccttggctaccccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataa 760  Q
    ||||||||| ||| ||| |||  ||||||||||||||||| ||||||||||||| |||| ||||| ||||| ||||||||||| || ||||| || ||||    
T  3458319 ggcgtagcccttcattggcaacaggtagccttggctacccaaaaaaatatattaatctttaattgtttggtctaaatttatattcggctaccccatataa 3458220  T
Q  761 taaatattaagccat--cccaaataaatttagttgtcgaaaatta 803  Q
    |||||||| ||  ||  ||||| |||||| ||||| |||||||||    
T  3458219 taaatattgagatataccccaagtaaattcagttgccgaaaatta 3458175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 682 - 819
Target Start/End: Original strand, 19795412 - 19795549
Alignment:
Q  682 ggggtagccttggctaccccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataataaatattaagccatcccaaa 781  Q
    ||||||||| | |||||||||||| | | | ||||||| |||||||||||||| ||||||||    ||||  ||||||||||||||| ||| | ||||||    
T  19795412 ggggtagcccttgctaccccaaaataaaaaatattcttgaattggttggtatatatttatatttagctactccaaataataaatattgagctaccccaaa 19795511  T
Q  782 taaatttagttgtcgaaaattaacttaagtaagaaagt 819  Q
     || ||| |||||||||||||||| ||| |||||||||    
T  19795512 caagtttggttgtcgaaaattaacataaataagaaagt 19795549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 854 - 986
Target Start/End: Original strand, 21295936 - 21296068
Alignment:
Q  854 tattggtttgatacttctgctctcaataacaattatggtgaaaactttttcaacattaaaagtttttaagacaatagtcataaacaaattaaatggacat 953  Q
    |||||||||||||||||   ||||| ||||||  ||   |||| ||||||||||| ||||| |  | ||||||||||||||| |||||||||||| |||     
T  21295936 tattggtttgatacttcccgtctcagtaacaacaataaagaaacctttttcaacaataaaaatgatcaagacaatagtcatagacaaattaaatgtacaa 21296035  T
Q  954 tcagtttcttgcaaataatctatttgtttacat 986  Q
    | |||||||||||||||| |||||| |||||||    
T  21296036 tgagtttcttgcaaataacctatttatttacat 21296068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 854 - 986
Target Start/End: Original strand, 46823808 - 46823940
Alignment:
Q  854 tattggtttgatacttctgctctcaataacaattatggtgaaaactttttcaacattaaaagtttttaagacaatagtcataaacaaattaaatggacat 953  Q
    ||||||||||||||||    ||||||||||||  ||   |||| ||||||||||| ||||| |  | ||||||||||||||| |||||||||||| |||     
T  46823808 tattggtttgatactttccgtctcaataacaacaataaagaaacctttttcaacaataaaaatgatcaagacaatagtcatagacaaattaaatgtacaa 46823907  T
Q  954 tcagtttcttgcaaataatctatttgtttacat 986  Q
    | |||||||||||||||| |||||| |||||||    
T  46823908 tgagtttcttgcaaataacctatttatttacat 46823940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 713 - 819
Target Start/End: Original strand, 35061851 - 35061957
Alignment:
Q  713 tattcttcaattggttggtataaatttatatccgactacctcaaataataaatattaagccatcccaaataaatttagttgtcgaaaattaacttaagta 812  Q
    ||||||| |||||||||||||| ||||||||    ||||||||||||||||||||| ||| |  | |||||| ||| |||||||||||||||| ||| ||    
T  35061851 tattcttgaattggttggtatatatttatatttagctacctcaaataataaatattgagctactctaaataagtttggttgtcgaaaattaacataaata 35061950  T
Q  813 agaaagt 819  Q
    |||||||    
T  35061951 agaaagt 35061957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 815 - 968
Target Start/End: Complemental strand, 11028064 - 11027911
Alignment:
Q  815 aaagtaaaattattaatacatgatggataaatttatttatattggtttgatacttctgctctcaataacaattatggtgaaaactttttcaacattaaaa 914  Q
    |||||||||  |||| |||| ||| |||| |||||||| |||||||||||||||||   ||||||||||||  ||   |||| ||||||||| |  ||||    
T  11028064 aaagtaaaaaaattattacaagattgatagatttatttgtattggtttgatacttccagtctcaataacaacaataaagaaacctttttcaaaaacaaaa 11027965  T
Q  915 gtttttaagacaatagtcataaacaaattaaatggacattcagtttcttgcaaa 968  Q
     || | ||||||||||||||  |||||||||||| ||| | |||||||||||||    
T  11027964 attctcaagacaatagtcatggacaaattaaatgtacaatgagtttcttgcaaa 11027911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 932 - 1020
Target Start/End: Complemental strand, 3458173 - 3458085
Alignment:
Q  932 cataaacaaattaaatggacattcagtttcttgcaaataatctatttgtttacatcggaagaaacattattaatctatttagtaaacgg 1020  Q
    ||||||||||||||||||| ||| ||||||||||||||||  ||||||||||||  |||  | ||||||||||| ||| ||||||||||    
T  3458173 cataaacaaattaaatggatattgagtttcttgcaaataacttatttgtttacactggagaagacattattaatttatctagtaaacgg 3458085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 703 - 936
Target Start/End: Complemental strand, 11906890 - 11906662
Alignment:
Q  703 aaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataataaatattaagccatcccaaataaatttagttgtcgaaaatt 802  Q
    ||||| |||||||||||  ||| |||| |||  || ||||||| |||| |  |||||||||| ||| ||| | | |||| || |||||||| | |||||     
T  11906890 aaaaaaatattattcttgtattagttgatatgtatctatatccaactaacctaaataataaacattgagctacctcaaacaagtttagttgccaaaaat- 11906792  T
Q  803 aacttaagtaagaaagtaaaattattaatacatgatggataaatttatttatattggtttgatacttctgctctcaataacaattatggtgaaaactttt 902  Q
    ||| ||| |||||||||| ||  |||| |||||    |||| |||||||| |||||||||| |||||| |||||||||||||||||| | || ||| |||    
T  11906791 aacataaataagaaagtagaaaaattattacatt---gatagatttatttgtattggtttggtacttccgctctcaataacaattatagagagaac-ttt 11906696  T
Q  903 tcaacattaaaagtttttaagacaatagtcataa 936  Q
    |||||| |||||  | | ||||||||||||||||    
T  11906695 tcaacaataaaaactatcaagacaatagtcataa 11906662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 696 - 801
Target Start/End: Original strand, 29123378 - 29123482
Alignment:
Q  696 taccccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataataaatattaagccatcccaaataaatttagttgtc 795  Q
    |||||||||||| | ||||||||| ||||| || ||||  |||| ||||   ||||| ||||||||||||||| ||| ||||||||||||||| ||||||    
T  29123378 taccccaaaaaaaa-attattctttaattgattagtatctatttgtatctagctaccccaaataataaatattgagctatcccaaataaatttcgttgtc 29123476  T
Q  796 gaaaat 801  Q
    ||||||    
T  29123477 gaaaat 29123482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 681 - 793
Target Start/End: Complemental strand, 11034077 - 11033965
Alignment:
Q  681 aggggtagccttggctaccccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataataaatattaagccatcccaa 780  Q
    ||||||||||||||||| || |||||| |||||||| || |  |||| |||||  |||||||||||  |||||||||||||||| ||| ||| | |||||    
T  11034077 aggggtagccttggctatccgaaaaaaaatattatttttgatgtggtcggtatgtatttatatccggttacctcaaataataaacattgagctaccccaa 11033978  T
Q  781 ataaatttagttg 793  Q
    | |||| ||||||    
T  11033977 acaaatatagttg 11033965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 680 - 936
Target Start/End: Complemental strand, 52403595 - 52403345
Alignment:
Q  680 aaggggtagccttggctaccccaaaaaat--atattattcttcaattggttggtataaatttatatccgactacctcaaataataaatattaagccatcc 777  Q
    ||||||||||||| ||||||| ||||||   |||||||||||  ||| ||||||||  || |||||||  |||||  |||||||||| ||| ||  | ||    
T  52403595 aaggggtagccttagctacccaaaaaaaataatattattcttgtattagttggtatgtatctatatccagctaccctaaataataaacattgagataccc 52403496  T
Q  778 caaataaatttagttgtcgaaaattaacttaagtaagaaagtaaaattattaatacatgatggataaatttatttatattggtttgatacttctgctctc 877  Q
     |||||| || ||||||| ||||  ||      |||||||||||||  |||| ||||| || |||| |||||||| |||||||||| | ||||  |||||    
T  52403495 taaataagttcagttgtcaaaaaaaaa------taagaaagtaaaaa-attattacatcattgatagatttatttgtattggtttggttcttccactctc 52403403  T
Q  878 aataacaattatggtgaaaactttttcaacattaaaagtttttaagacaatagtcataa 936  Q
    ||||||||||||   || ||||||||||||| |||||  | | ||||||||||||||||    
T  52403402 aataacaattat-aagagaactttttcaacaataaaaactatcaagacaatagtcataa 52403345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 682 - 788
Target Start/End: Complemental strand, 36312619 - 36312514
Alignment:
Q  682 ggggtagccttggctaccccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataataaatattaagccatcccaaa 781  Q
    ||||||||||| ||||| | |||| ||| ||||||||| ||||||||| |||||| ||| ||    ||||||||||||||||||||||||| | | ||||    
T  36312619 ggggtagcctttgctactc-aaaatataaattattcttgaattggttgatataaaattacatttagctacctcaaataataaatattaagctacctcaaa 36312521  T
Q  782 taaattt 788  Q
    |||||||    
T  36312520 taaattt 36312514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 921 - 1018
Target Start/End: Original strand, 29648410 - 29648507
Alignment:
Q  921 aagacaatagtcataaacaaattaaatggacattcagtttcttgcaaataatctatttgtttacatcggaagaaacattattaatctatttagtaaac 1018  Q
    |||||||||||||||| ||||||||| ||||| |  |||| |||||||| || | |||||||| || | || | | ||||||||| ||||||||||||    
T  29648410 aagacaatagtcataatcaaattaaacggacaataggtttattgcaaatgatttctttgtttatattgaaaaagagattattaatttatttagtaaac 29648507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 748 - 802
Target Start/End: Original strand, 40785337 - 40785391
Alignment:
Q  748 ctacctcaaataataaatattaagccatcccaaataaatttagttgtcgaaaatt 802  Q
    ||||||||||||||||||||| ||| | | ||||||||||| |||| ||||||||    
T  40785337 ctacctcaaataataaatattgagctacctcaaataaatttggttgccgaaaatt 40785391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 90; Significance: 6e-43; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 681 - 1010
Target Start/End: Original strand, 4435024 - 4435352
Alignment:
Q  681 aggggtagccttggctaccccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataataaatattaagccatcccaa 780  Q
    ||||||||||  |||||||| |||||||||||||||||| ||||||| |||||  |||||||||||  ||||| |||||||||| ||| | | | || ||    
T  4435024 aggggtagccaaggctacccaaaaaaatatattattcttgaattggtcggtatgtatttatatccggttaccttaaataataaacattgaactaccctaa 4435123  T
Q  781 ataaatttagttgtcgaaaattaacttaagtaagaaagtaaaattattaatacatgatggataaatttatttatattggtttgatacttctgctctcaat 880  Q
    |||| || | ||| | ||| ||| | ||| ||| |||||||||  || | | |||||| |||| |||||||| |||| |||||||||||| | |||||||    
T  4435124 ataagttcaattg-caaaagttatcataaataataaagtaaaacaatcactgcatgattgatagatttatttgtatttgtttgatacttccggtctcaat 4435222  T
Q  881 aacaattatggtgaaaactttttcaacattaaaagtttttaagacaatagtcataaacaaattaaatggacattcagtttcttgcaaataatctatttgt 980  Q
    ||||||||| | |||| |||||| |||| ||||| || |  |||||||||||||| | || || |||||||| | ||||||||| |||||| |||||| |    
T  4435223 aacaattatagagaaaccttttttaacaataaaaattatctagacaatagtcatagataattttaatggacaatgagtttcttgtaaataacctatttat 4435322  T
Q  981 ttacatcggaagaaacattattaatctatt 1010  Q
    ||||||  ||| | ||||||||||||||||    
T  4435323 ttacatttgaaaagacattattaatctatt 4435352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 910 - 1017
Target Start/End: Complemental strand, 42799275 - 42799168
Alignment:
Q  910 taaaagtttttaagacaatagtcataaacaaattaaatggacattcagtttcttgcaaataatctatttgtttacatcggaagaaacattattaatctat 1009  Q
    ||||| |||| |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| |||| | |||||||||||||||    
T  42799275 taaaaattttaaagacaatagtcataaacaaattaaatggacattgagtttcttgcaaataaactatttgtttacattggaaaagacattattaatctat 42799176  T
Q  1010 ttagtaaa 1017  Q
    ||||||||    
T  42799175 ttagtaaa 42799168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 665 - 799
Target Start/End: Complemental strand, 45656183 - 45656049
Alignment:
Q  665 tagcctttccttgtcaaggggtagccttggctaccccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataataaa 764  Q
    ||||| ||| ||| |||||||||||||||||||||||||||||||||||| | || ||||||||||||||||||||| | || ||||| |||||||||||    
T  45656183 tagcccttcattggcaaggggtagccttggctaccccaaaaaatatattaatttttaattggttggtataaatttattttcggctaccccaaataataaa 45656084  T
Q  765 tattaagccatcccaaataaatttagttgtcgaaa 799  Q
    |||| ||| | |||||| ||||| |||||||||||    
T  45656083 tattgagctaccccaaacaaattcagttgtcgaaa 45656049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 932 - 1020
Target Start/End: Original strand, 16546354 - 16546443
Alignment:
Q  932 cataaacaaattaaatggacattcagtttcttgcaaataatctatttg-tttacatcggaagaaacattattaatctatttagtaaacgg 1020  Q
    ||||||||||||||||||||||| |||||||| ||||||| ||||||| ||||||| |||| | ||||||||||||||||||||||||||    
T  16546354 cataaacaaattaaatggacattgagtttcttccaaataacctatttgttttacattggaaaagacattattaatctatttagtaaacgg 16546443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 681 - 885
Target Start/End: Original strand, 38881095 - 38881298
Alignment:
Q  681 aggggtagccttggctaccccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataataaatattaagccatcccaa 780  Q
    ||||||||||||| |||||  |||||| ||||||||||| ||||| |  || || |||||||| |||||| || |||||||||||||| | | ||| |||    
T  38881095 aggggtagccttgcctaccaaaaaaaa-atattattcttgaattgataagtgtatatttatattcgactatcttaaataataaatattgaactatcacaa 38881193  T
Q  781 ataaatttagttgtcgaaaattaacttaagtaagaaagtaaaattattaatacatgatggataaatttatttata-ttggtttgatacttctgctctcaa 879  Q
    ||||||||| ||||  ||||||| | ||| ||| |||||||||  || | || | ||| |||||||||||||||| ||||||||||||||| | ||||||    
T  38881194 ataaatttaattgt-aaaaattagcataaataataaagtaaaaaaatcactataagattgataaatttatttatatttggtttgatacttccgatctcaa 38881292  T
Q  880 taacaa 885  Q
    ||||||    
T  38881293 taacaa 38881298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 932 - 1020
Target Start/End: Complemental strand, 39070292 - 39070203
Alignment:
Q  932 cataaacaaattaaatggacattcagtttcttgcaaataatctatttg-tttacatcggaagaaacattattaatctatttagtaaacgg 1020  Q
    |||||| |||||||||||||||| |||||||||||||||| ||||||| ||||||| |||| | ||||||||||||||||||||||||||    
T  39070292 cataaataaattaaatggacattgagtttcttgcaaataacctatttgttttacattggaaaagacattattaatctatttagtaaacgg 39070203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 679 - 805
Target Start/End: Original strand, 16546228 - 16546354
Alignment:
Q  679 caaggggtagccttggctaccccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataataaatattaagccatccc 778  Q
    |||||| |||||||||||||||||||||||||||||  ||| |||  |||||| ||||||||||| || ||||| ||||||||||| ||| ||| | ||     
T  16546228 caagggttagccttggctaccccaaaaaatatattaaactttaataagttggtgtaaatttatattcggctaccccaaataataaacattgagctaccct 16546327  T
Q  779 aaataaatttagttgtcgaaaattaac 805  Q
    ||| ||||| ||||| |||||||||||    
T  16546328 aaacaaattcagttgccgaaaattaac 16546354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 932 - 1020
Target Start/End: Complemental strand, 45656043 - 45655955
Alignment:
Q  932 cataaacaaattaaatggacattcagtttcttgcaaataatctatttgtttacatcggaagaaacattattaatctatttagtaaacgg 1020  Q
    ||||||||| | ||||||||||| | |||||||||||||| |||||||||||||| | || | ||||||||||||||||||||||||||    
T  45656043 cataaacaattgaaatggacattgaatttcttgcaaataacctatttgtttacattgaaaaagacattattaatctatttagtaaacgg 45655955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 932 - 1021
Target Start/End: Original strand, 37614591 - 37614683
Alignment:
Q  932 cataaacaaattaaatggacattcagtttcttgcaaataatctatttgtt---tacatcggaagaaacattattaatctatttagtaaacggc 1021  Q
    |||||||||||||||| |||||| | |||||||||||||| |||||||||   ||||| |||| | |||||||||||||||||||||||||||    
T  37614591 cataaacaaattaaatagacattgaatttcttgcaaataacctatttgtttactacattggaaaagacattattaatctatttagtaaacggc 37614683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 679 - 800
Target Start/End: Original strand, 26180431 - 26180551
Alignment:
Q  679 caaggggtagccttggctaccccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataataaatattaagccatccc 778  Q
    ||||| |||||||||||||||| ||||||||||||| | || |||| ||||||||  |||||||||   |||| |||||||||||||||| ||| | | |    
T  26180431 caaggagtagccttggctaccc-aaaaaatatattaattttgaattagttggtatgtatttatatctagctacttcaaataataaatattgagctacctc 26180529  T
Q  779 aaataaatttagttgtcgaaaa 800  Q
    ||| || |||||||||| ||||    
T  26180530 aaacaagtttagttgtccaaaa 26180551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 798 - 1015
Target Start/End: Complemental strand, 21746379 - 21746162
Alignment:
Q  798 aaattaacttaagtaagaaagtaaaattattaatacatgatggataaatttatttatattggtttgatacttctgctctcaataacaattatggtgaaaa 897  Q
    |||||||| ||| ||||||| |||||  |||| |||||||| | ||||||||||| ||||  ||| | |||| || | |||| ||||| ||  | |||||    
T  21746379 aaattaacataaataagaaaataaaaaaattattacatgattggtaaatttatttgtattaatttaacacttttggtatcaacaacaaatacagagaaaa 21746280  T
Q  898 ctttttcaacattaaaagtttttaagacaatagtcataaacaaattaaatggacattcagtttcttgcaaataatctatttgtttacatcggaagaaaca 997  Q
    | |||| || | ||||| || |||| |||||||||||||||||||||||  |  | | |||||| ||||| |||  ||||| ||||||| | ||   |||    
T  21746279 cgtttttaagaataaaaattgttaaaacaatagtcataaacaaattaaacaggtagtaagtttcatgcaagtaacttatttatttacattgaaaatgaca 21746180  T
Q  998 ttattaatctatttagta 1015  Q
    |||||| |||||||||||    
T  21746179 ttattagtctatttagta 21746162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 684 - 817
Target Start/End: Complemental strand, 35525039 - 35524906
Alignment:
Q  684 ggtagccttggctaccccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataataaatattaagccatcccaaata 783  Q
    ||||||| ||||||||||||||||  |||| ||||| |||  ||||||||   |||||||    ||||| ||||||| ||||||| ||| | ||||||||    
T  35525039 ggtagccatggctaccccaaaaaaattatttttcttgaatatgttggtatgtttttatatttagctaccccaaataaaaaatatttagctaccccaaata 35524940  T
Q  784 aatttagttgtcgaaaattaacttaagtaagaaa 817  Q
    |||||| ||||  ||||||||| ||| |||||||    
T  35524939 aatttatttgttaaaaattaacataaataagaaa 35524906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 700 - 764
Target Start/End: Complemental strand, 39070428 - 39070364
Alignment:
Q  700 ccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataataaa 764  Q
    ||||||||||||||| |||| |||  |||||| ||||||||||| || |||||||||||||||||    
T  39070428 ccaaaaaatatattaatctttaataagttggtgtaaatttatattcggctacctcaaataataaa 39070364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 684 - 817
Target Start/End: Complemental strand, 8230503 - 8230369
Alignment:
Q  684 ggtagccttggctaccccaaaaaata-tattattcttcaattggttggtataaatttatatccgactacctcaaataataaatattaagccatcccaaat 782  Q
    ||||||| |||||||||||||||| | |||||||||| |||  ||||||||   |||||||    ||||| ||||||| ||||||| ||| | ||||||     
T  8230503 ggtagccatggctaccccaaaaaaaagtattattcttgaatatgttggtatgtttttatatttagctaccccaaataaaaaatatttagctaccccaaac 8230404  T
Q  783 aaatttagttgtcgaaaattaacttaagtaagaaa 817  Q
    ||||||| ||||  ||||||||| ||| |||||||    
T  8230403 aaatttatttgttaaaaattaacataaataagaaa 8230369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 682 - 739
Target Start/End: Original strand, 10412041 - 10412098
Alignment:
Q  682 ggggtagccttggctaccccaaaaaatatattattcttcaattggttggtataaattt 739  Q
    ||||||||||| |||||||||||||||| ||||||||| ||||   ||||||||||||    
T  10412041 ggggtagcctttgctaccccaaaaaataaattattcttgaattaagtggtataaattt 10412098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 537 - 602
Target Start/End: Complemental strand, 10781991 - 10781926
Alignment:
Q  537 tacaagttgaagaaagctttgtatggtttaaggcaagatcccaaatcttggtatagcaagattgaa 602  Q
    ||||||||||| |||||||| |||||||||| ||||| ||| | | |||||||||| || ||||||    
T  10781991 tacaagttgaaaaaagctttatatggtttaaagcaagctccaagagcttggtatagtaaaattgaa 10781926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 83; Significance: 9e-39; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 681 - 1010
Target Start/End: Original strand, 10177670 - 10177995
Alignment:
Q  681 aggggtagccttggctaccccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataataaatattaagccatcccaa 780  Q
    ||||||||||||||||||||||||||| | |  | |||| || |||| |||||  |||| |||||  ||||  ||||||||||||||| ||| | || ||    
T  10177670 aggggtagccttggctaccccaaaaaaaaaa--aatcttgaagtggtcggtatgtatttttatccagctactccaaataataaatattgagctaccctaa 10177767  T
Q  781 ataaatttagttgtcgaaaattaacttaagtaagaaagtaaaattattaatacatgatggataaatttatttatattggtttgatacttctgctctcaat 880  Q
    |||||||  |||| | ||||||||| ||| ||| |||||||||  |||| |||| ||| |||| |||||||| |||| |||||||||| | | |||||||    
T  10177768 ataaattccgttg-caaaaattaacataaataataaagtaaaaa-attactacaagattgatagatttatttgtatttgtttgatactcccgatctcaat 10177865  T
Q  881 aacaattatggtgaaaactttttcaacattaaaagtttttaagacaatagtcataaacaaattaaatggacattcagtttcttgcaaataatctatttgt 980  Q
    |||||  || | ||||  |||||||||| ||||| || | ||||||||||||||  ||||| |||||||||  | |||||||||||||||| |||||| |    
T  10177866 aacaacaatagagaaacttttttcaacaataaaaattatcaagacaatagtcattgacaaactaaatggacggtgagtttcttgcaaataacctatttat 10177965  T
Q  981 ttacatcggaagaaacattattaatctatt 1010  Q
    | ||||  ||| ||||||||||||||||||    
T  10177966 tcacatttgaaaaaacattattaatctatt 10177995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 9e-36
Query Start/End: Original strand, 681 - 986
Target Start/End: Original strand, 23614402 - 23614705
Alignment:
Q  681 aggggtagccttggctaccccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataataaatattaagccatcccaa 780  Q
    |||||||||||||||||||||||||||  |||||||||| ||||  | |||||| ||||||||||| |||||  |||||||||| ||| ||| | | |||    
T  23614402 aggggtagccttggctaccccaaaaaaagtattattcttgaattaatcggtatatatttatatccggctaccctaaataataaacattgagctacctcaa 23614501  T
Q  781 ataaatttagttgtcgaaaattaacttaagtaagaaagtaaaattattaatacatgatggataaatttatttatattggtttgatacttctgctctcaat 880  Q
    |||| |||||||| | ||||||| | ||| ||| |||||||||  | || |||| ||| |||| |||||||| ||||||||||||| ||  | |||||||    
T  23614502 ataagtttagttg-caaaaattagcataaataataaagtaaaa-aactactacaagattgatagatttatttgtattggtttgatattttcggtctcaat 23614599  T
Q  881 aacaattatggtgaaaactttttcaacattaaaagtttttaagacaatagtcataaacaaattaaatggacattcagtttcttgcaaataatctatttgt 980  Q
    |||||  ||   |||| |||||||||||  |||| ||   |||||||||||| || ||||||||||  |||| | ||||||||||||||||  ||||| |    
T  23614600 aacaacaataaagaaacctttttcaacaacaaaaattaacaagacaatagtcgtagacaaattaaacagacaatgagtttcttgcaaataacatatttat 23614699  T
Q  981 ttacat 986  Q
    ||||||    
T  23614700 ttacat 23614705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 681 - 1010
Target Start/End: Complemental strand, 10406499 - 10406174
Alignment:
Q  681 aggggtagccttggctaccccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataataaatattaagccatcccaa 780  Q
    |||||||||||||||||||| |||||| | || |||||| || |||| |||||  |||| |||||| ||||  ||||||||||||||| ||  | | |||    
T  10406499 aggggtagccttggctacccaaaaaaaaaaat-attcttgaagtggtcggtatgtatttttatccggctactccaaataataaatattgagttacctcaa 10406401  T
Q  781 ataaatttagttgtcgaaaattaacttaagtaagaaagtaaaattattaatacatgatggataaatttatttatattggtttgatacttctgctctcaat 880  Q
    | |||||   ||||  |||||||   ||| ||| |||||||||  |||| |||| ||| |||| |||||||| |||| |||||||||| | | |||||||    
T  10406400 acaaattccattgta-aaaattagtataaataataaagtaaaaaaattactacaagattgatagatttatttgtatttgtttgatactcccgatctcaat 10406302  T
Q  881 aacaattatggtgaaaactttttcaacattaaaagtttttaagacaatagtcataaacaaattaaatggacattcagtttcttgcaaataatctatttgt 980  Q
    ||||| ||  | ||||  |||||||||| ||| | || | ||||||||||||||  ||||| |||||||||| | |||||||||||||||| |||||| |    
T  10406301 aacaacta--gagaaacttttttcaacaataataattatcaagacaatagtcattgacaaactaaatggacagtgagtttcttgcaaataacctatttat 10406204  T
Q  981 ttacatcggaagaaacattattaatctatt 1010  Q
    ||||||  ||| ||||||||||||||||||    
T  10406203 ttacattcgaaaaaacattattaatctatt 10406174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 776 - 986
Target Start/End: Complemental strand, 1600805 - 1600596
Alignment:
Q  776 cccaaataaatttagttgtcgaaaattaacttaagtaagaaagtaaaattattaatacatgatggataaatttatttatattggtttgatacttctgctc 875  Q
    ||||||||| |||||||| | ||||||| | ||| ||| |||||||||  |||| |||| ||| |||| ||||||||  ||||||||||| |||  | ||    
T  1600805 cccaaataagtttagttg-caaaaattagcataaataataaagtaaaaaaattactacaagattgatagatttatttgcattggtttgatgctttcggtc 1600707  T
Q  876 tcaataacaattatggtgaaaactttttcaacattaaaagtttttaagacaatagtcataaacaaattaaatggacattcagtttcttgcaaataatcta 975  Q
    ||||||||||  || | |||| | ||||||||| ||||| || | ||||||||||||||| |||||||||||||||| | |||||||||||||||| |||    
T  1600706 tcaataacaacaatagagaaacccttttcaacaataaaaattatcaagacaatagtcatagacaaattaaatggacaatgagtttcttgcaaataaccta 1600607  T
Q  976 tttgtttacat 986  Q
    ||| |||||||    
T  1600606 tttatttacat 1600596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 681 - 1010
Target Start/End: Original strand, 11142442 - 11142770
Alignment:
Q  681 aggggtagccttggctaccccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataataaatattaagccatcccaa 780  Q
    ||||||||||||||||||||||||||| ||||||| ||| || |||| |||||  | |||||| || ||||||||||||||||| ||| ||| |  ||||    
T  11142442 aggggtagccttggctaccccaaaaaa-atattatacttaaagtggtcggtatgtacttatattcggctacctcaaataataaacattgagctactccaa 11142540  T
Q  781 ataaatttagttgtcgaaaattaacttaagtaagaaagtaaaattattaat-acatgatggataaatttatttatattggtttgatacttctgctctcaa 879  Q
    |||| ||  ||   | |||||| || ||| ||| |||||||||  |||||  |||  |  |||| |||||||| ||||||||||||||| | | ||| ||    
T  11142541 ataagttccgtca-caaaaatttacataaataataaagtaaaaaaattaaccacaaaactgatagatttatttgtattggtttgatactcccgatctaaa 11142639  T
Q  880 taacaattatggtgaaaactttttcaacattaaaagtttttaagacaatagtcataaacaaattaaatggacattcagtttcttgcaaataatctatttg 979  Q
    ||||||  || | |||  ||||||||||| ||||| || | ||||||||| | ||| |||||||||||||||| | |||||||||| ||||| |||||      
T  11142640 taacaacaatagagaagcctttttcaacaataaaaattatcaagacaatatttatagacaaattaaatggacaatgagtttcttgcgaataacctattca 11142739  T
Q  980 tttacatcggaagaaacattattaatctatt 1010  Q
    |||||||  ||| | ||||||||||||||||    
T  11142740 tttacatttgaaaagacattattaatctatt 11142770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 689 - 986
Target Start/End: Original strand, 47367639 - 47367935
Alignment:
Q  689 ccttggctaccccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataataaatattaagccatcccaaataaattt 788  Q
    |||||||||||||||||||||| ||||| || |||| ||||||||  ||||||||    ||||||||||||||||| ||| ||| | |||||| | ||      
T  47367639 ccttggctaccccaaaaaatat-ttattgttgaattagttggtatgtatttatattttgctacctcaaataataaacattgagctaccccaaacatatcc 47367737  T
Q  789 agttgtcgaaaattaacttaagtaagaaagtaaaattattaatacatgatggataaatttatttatattggtttgatacttctgctctcaataacaatta 888  Q
    | ||||||||||||| | ||  |||||||||||||  |||| |||||||| |||| |||||||| || ||||||| || ||    || ||||||||| ||    
T  47367738 aattgtcgaaaattagcatatataagaaagtaaaaa-attactacatgattgatagatttatttgtaatggtttggtattttcagtcgcaataacaacta 47367836  T
Q  889 tggtgaaaactttttcaaca-ttaaaagtttttaagacaatagtcataaacaaattaaatggacattcagtttcttgcaaataatctatttgtttacat 986  Q
    | | ||||||||||| |||| |||||| || | ||| ||||||| ||||||| || ||| || || | ||||||||||||||| |||| ||||||||||    
T  47367837 tagagaaaacttttttaacaattaaaaattatcaaggcaatagttataaacatatcaaacgggcaatgagtttcttgcaaatagtctaattgtttacat 47367935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 686 - 1010
Target Start/End: Original strand, 19313158 - 19313479
Alignment:
Q  686 tagccttggctaccccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataataaatattaagccatcccaaataaa 785  Q
    |||||||||||||||||||||  | ||||||||| || |||| |||||  || | |||||| ||||| ||||||||||||||| ||| | |||||| | |    
T  19313158 tagccttggctaccccaaaaataaaattattcttgaagtggtcggtatgtatatttatccggctaccccaaataataaatattgagctaccccaaacaca 19313257  T
Q  786 tttagttgtcgaaaattaacttaagtaagaaagtaaaattattaatacatgatggataaatttatttatattggtttgatacttctgctctcaataacaa 885  Q
    ||  |||| | || |||||| ||| ||| |||||||||  |||| |||| ||| |||  ||  |||| ||||  ||||||||| | | ||||||||||||    
T  19313258 ttccgttg-caaatattaacataaataataaagtaaaaaaattactacaagattgatggat--atttgtatttctttgatactcccgatctcaataacaa 19313354  T
Q  886 ttatggtgaaaactttttcaacattaaaagtttttaagacaatagtcataaacaaattaaatggacattcagtttcttgcaaataatctatttgtttaca 985  Q
      || | ||||  |||||||||| ||||| || | || |||||||||||| ||||||||||| || | | ||||||||||||||||  ||||| ||||||    
T  19313355 caatagagaaacttttttcaacaataaaaattatcaaaacaatagtcatagacaaattaaatagatagtgagtttcttgcaaataacttatttatttaca 19313454  T
Q  986 tcggaagaaacattattaatctatt 1010  Q
    |  ||| | ||||||||||||||||    
T  19313455 tttgaaaagacattattaatctatt 19313479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 661 - 793
Target Start/End: Complemental strand, 29799293 - 29799162
Alignment:
Q  661 ggcgtagcctttccttgtcaaggggtagccttggctaccccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataa 760  Q
    ||||||||| ||| ||| |||||||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||| || ||||| |||||||    
T  29799293 ggcgtagcccttcattggcaaggggtagccttggctaccc-aaaaaatatattaatctttaattggttggtataaatttatattcggctaccccaaataa 29799195  T
Q  761 taaatattaagccatcccaaataaatttagttg 793  Q
    |||| ||| ||  |  ||||||||||| |||||    
T  29799194 taaacattgagttactccaaataaattcagttg 29799162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 661 - 805
Target Start/End: Complemental strand, 30951050 - 30950906
Alignment:
Q  661 ggcgtagcctttccttgtcaaggggtagccttggctaccccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataa 760  Q
    |||| |||| ||| ||| |||||||||||||||||||||||||||||||||||| |||| |||  |||||| |||||| |||| ||| |||| |||||||    
T  30951050 ggcgcagcccttcattgacaaggggtagccttggctaccccaaaaaatatattaatctttaataagttggtgtaaattaatattcgagtaccccaaataa 30950951  T
Q  761 taaatattaagccatcccaaataaatttagttgtcgaaaattaac 805  Q
    |||| ||| |||   |||||| ||||| ||||| |||||||||||    
T  30950950 taaacattgagcatccccaaacaaattcagttgccgaaaattaac 30950906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 932 - 1020
Target Start/End: Complemental strand, 30950906 - 30950817
Alignment:
Q  932 cataaacaaattaaatggacattcagtttcttgcaaataatctatttg-tttacatcggaagaaacattattaatctatttagtaaacgg 1020  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||| | || | ||||||||||||||||||||||||||    
T  30950906 cataaacaaattaaatggacattgagtttcttgcaaataacctatttgttttacattgaaaaagacattattaatctatttagtaaacgg 30950817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 845 - 1010
Target Start/End: Original strand, 44961383 - 44961548
Alignment:
Q  845 atttatttatattggtttgatacttctgctctcaataacaattatggtgaaaactttttcaacattaaaagtttttaagacaatagtcataaacaaatta 944  Q
    ||||||||  |||| |||||| |||  | ||||||||||||  || | |||| | ||||||||| ||||| || | ||||||||||||||| ||||||||    
T  44961383 atttatttgcattgatttgatgctttcggtctcaataacaacaatagagaaacccttttcaacagtaaaaattatcaagacaatagtcatagacaaatta 44961482  T
Q  945 aatggacattcagtttcttgcaaataatctatttgtttacatcggaagaaacattattaatctatt 1010  Q
    |||||||| | |||||||||||||||| |||||| |||||||  ||| | |||| |||||||||||    
T  44961483 aatggacaatgagtttcttgcaaataacctatttatttacatttgaaaagacatcattaatctatt 44961548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 854 - 986
Target Start/End: Original strand, 15757680 - 15757812
Alignment:
Q  854 tattggtttgatacttctgctctcaataacaattatggtgaaaactttttcaacattaaaagtttttaagacaatagtcataaacaaattaaatggacat 953  Q
    |||||||||||||||||   ||||||||||||  ||   |||| ||||||||||| ||||| |  | ||||||||||||||| |||||||||||| |||     
T  15757680 tattggtttgatacttcccgtctcaataacaacaataaagaaacctttttcaacaataaaaatgatcaagacaatagtcatagacaaattaaatgtacaa 15757779  T
Q  954 tcagtttcttgcaaataatctatttgtttacat 986  Q
    | |||||||||||||||| |||||| |||||||    
T  15757780 tgagtttcttgcaaataacctatttatttacat 15757812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 682 - 817
Target Start/End: Original strand, 21972199 - 21972335
Alignment:
Q  682 ggggtagccttggctaccccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataataaatattaagccatcccaaa 781  Q
    ||||||||||| |||||||||||||||| ||||||||| ||||||||| |||||| ||| ||   |||||| ||||||||||||||| ||| | ||||||    
T  21972199 ggggtagcctttgctaccccaaaaaataaattattcttgaattggttgatataaaattacatttaactaccccaaataataaatattgagctaccccaaa 21972298  T
Q  782 taaatttag-ttgtcgaaaattaacttaagtaagaaa 817  Q
    |||| || | ||| ||||||||| | ||| |||||||    
T  21972299 taaacttggtttgccgaaaattagcataaataagaaa 21972335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 932 - 1017
Target Start/End: Complemental strand, 29799150 - 29799065
Alignment:
Q  932 cataaacaaattaaatggacattcagtttcttgcaaataatctatttgtttacatcggaagaaacattattaatctatttagtaaa 1017  Q
    ||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| || | | |||||||||||| ||||||||||    
T  29799150 cataaacaaattaaatggatattgagtttcttacaaataacctatttgtttacattgggaaagacattattaatcaatttagtaaa 29799065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 854 - 986
Target Start/End: Original strand, 10620067 - 10620199
Alignment:
Q  854 tattggtttgatacttctgctctcaataacaattatggtgaaaactttttcaacattaaaagtttttaagacaatagtcataaacaaattaaatggacat 953  Q
    |||||||||||||||||   ||||||||||||  ||   |||| ||||||||||| ||||| |  | ||||||||||||||| |||||||||||| |||     
T  10620067 tattggtttgatacttcccgtctcaataacaacaataaagaaacctttttcaacaataaaaatgatcaagacaatagtcatagacaaattaaatgtacaa 10620166  T
Q  954 tcagtttcttgcaaataatctatttgtttacat 986  Q
    | ||||||||| |||||| |||||| |||||||    
T  10620167 tgagtttcttgaaaataacctatttatttacat 10620199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 748 - 863
Target Start/End: Original strand, 29357170 - 29357284
Alignment:
Q  748 ctacctcaaataataaatattaagccatcccaaataaatttagttgtcgaaaattaacttaagtaagaaagtaaaattattaatacatgatggataaatt 847  Q
    ||||| ||||||||||||||| ||| | ||||||||| |||||||| ||||||||||| ||| ||||||||| |||  | || ||||| || |||| |||    
T  29357170 ctaccccaaataataaatattgagctaccccaaataagtttagttgccgaaaattaacataaataagaaagtgaaa-aagtactacatcattgatagatt 29357268  T
Q  848 tatttatattggtttg 863  Q
    ||||| ||||||||||    
T  29357269 tatttgtattggtttg 29357284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 831 - 947
Target Start/End: Complemental strand, 52111177 - 52111063
Alignment:
Q  831 tacatgatggataaatttatttatattggtttgatacttctgctctcaataacaattatggtgaaaactttttcaacattaaaagtttttaagacaatag 930  Q
    ||||| || ||||||||||||| ||||||||||||||||  | |||||||||||| ||  | ||||||| |||||||| ||||| || | | || ||||     
T  52111177 tacataattgataaatttatttgtattggtttgatactttcgatctcaataacaacta--gagaaaactatttcaacaataaaaattatcatgaaaataa 52111080  T
Q  931 tcataaacaaattaaat 947  Q
    |||||||||||||||||    
T  52111079 tcataaacaaattaaat 52111063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 811 - 935
Target Start/End: Complemental strand, 33241493 - 33241370
Alignment:
Q  811 taagaaagtaaaattattaatacatgatggataaatttatttatattggtttgatacttctgctctcaataacaattatggtgaaaactttttcaacatt 910  Q
    |||||| |||||| ||||| ||||| |   ||| |||||||||||||| |||||||||| |  |||||| ||||||||| | |||||| ||||||||| |    
T  33241493 taagaatgtaaaaatattactacataactaatagatttatttatattgatttgatacttttagtctcaacaacaattatagagaaaac-ttttcaacaat 33241395  T
Q  911 aaaagtttttaagacaatagtcata 935  Q
    |||| || | |||||||||||||||    
T  33241394 aaaaattatcaagacaatagtcata 33241370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 956 - 1020
Target Start/End: Original strand, 28403130 - 28403194
Alignment:
Q  956 agtttcttgcaaataatctatttgtttacatcggaagaaacattattaatctatttagtaaacgg 1020  Q
    |||||| ||||||||| |||||||||||||| | || | |||||||| ||||||||| |||||||    
T  28403130 agtttcatgcaaataacctatttgtttacattgaaaaagacattattgatctatttaataaacgg 28403194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 716 - 863
Target Start/End: Complemental strand, 27696790 - 27696645
Alignment:
Q  716 tcttcaattggttggtataaatttatatccgactacctcaaataataaatattaagccatcccaaataaatttagttgtcgaaaattaacttaagtaaga 815  Q
    |||| ||||||||| |||| ||||||||    ||||| ||||||||||||||| ||| | |  |||||||||| |||| |||| |||||| ||| |||||    
T  27696790 tcttgaattggttgatatatatttatatttagctacc-caaataataaatattgagctaccttaaataaatttggttgccgaatattaacataaataaga 27696692  T
Q  816 aagtaaaattattaatacatgatggataaatttatttatattggtttg 863  Q
    |||| |||  | || ||||| || |||| |||||||| ||||||||||    
T  27696691 aagtgaaa-aaatactacatcattgatagatttatttgtattggtttg 27696645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 943 - 1018
Target Start/End: Complemental strand, 33240946 - 33240871
Alignment:
Q  943 taaatggacattcagtttcttgcaaataatctatttgtttacatcggaagaaacattattaatctatttagtaaac 1018  Q
    |||||||||||| | ||| ||| |||| | ||||| |||||||| |||| | |||||||||||||||||| |||||    
T  33240946 taaatggacattgaatttattgaaaatgacctattagtttacattggaaaatacattattaatctatttattaaac 33240871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 750 - 805
Target Start/End: Complemental strand, 50074077 - 50074023
Alignment:
Q  750 acctcaaataataaatattaagccatcccaaataaatttagttgtcgaaaattaac 805  Q
    ||||||||||| ||||||| ||| |||||||||||||||| |||| ||||||||||    
T  50074077 acctcaaataa-aaatatttagctatcccaaataaatttatttgttgaaaattaac 50074023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 76; Significance: 1e-34; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 684 - 803
Target Start/End: Original strand, 6931 - 7049
Alignment:
Q  684 ggtagccttggctaccccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataataaatattaagccatcccaaata 783  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||| |  |||||||||||||| ||| | |||||| |    
T  6931 ggtagccttggctacccccaaaaatatattattcttcaattgtttggtataaatttatatccggctaacctaaataataaatattgagcta-cccaaaca 7029  T
Q  784 aatttagttgtcgaaaatta 803  Q
    ||||||||||||||||||||    
T  7030 aatttagttgtcgaaaatta 7049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 67; Significance: 3e-29; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 684 - 1010
Target Start/End: Complemental strand, 292579 - 292254
Alignment:
Q  684 ggtagccttggctaccccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataataaatattaagccatcccaaata 783  Q
    |||||||||||||||||||| ||| ||||||| ||| || |||| |||||  | ||||||||| ||| | ||||||||||| ||| ||  ||  ||||||    
T  292579 ggtagccttggctaccccaagaaaaatattatacttgaagtggtcggtatgtacttatatccggctatcccaaataataaacattgagttatttcaaata 292480  T
Q  784 aatttagttgtcgaaaattaacttaagtaagaaagtaaaattattaatacatgatggataaatttatttatattggtttgatacttctgctctcaataac 883  Q
    | ||  ||   | |||||| || ||| ||| |||||||||  ||||  ||| ||  |||| |||||||| ||||||||||||||| | | ||||||||||    
T  292479 agttccgtca-caaaaatttacataaataataaagtaaaaaaattaccacaagactgatagatttatttgtattggtttgatactcccgatctcaataac 292381  T
Q  884 aattatggtgaaaactttttcaacattaaaagtttttaagacaatagtcataaacaaattaaatggacattcagtttcttgcaaataatctatttgttta 983  Q
    || ||| | |||  ||||||||||| ||||| || | ||||||||| ||||| |||||||||||| ||| | |||||||||| ||||| |||||| ||||    
T  292380 aactatagagaagcctttttcaacaataaaaattatcaagacaatattcatagacaaattaaatgaacaatgagtttcttgcgaataacctatttattta 292281  T
Q  984 catcggaagaaacattattaatctatt 1010  Q
     ||  ||| | ||| ||||||||||||    
T  292280 tatttgaaaagacactattaatctatt 292254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481 (Bit Score: 60; Significance: 5e-25; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 681 - 1004
Target Start/End: Original strand, 6455 - 6773
Alignment:
Q  681 aggggtagccttggctaccccaaaaaatatat-tattcttcaattggttggtataaatttatatccgactacctcaaataataaatattaagccatccca 779  Q
    |||||||||||||||||||| |||||| | |  | ||||| || |||| |||||  |||| ||| || ||||||||||||||||||||| ||| |  |||    
T  6455 aggggtagccttggctacccaaaaaaaaaaaaattttctttaagtggtcggtatgtatttttattcggctacctcaaataataaatattgagctactcca 6554  T
Q  780 aataaatttagttgtcgaaaattaacttaagtaagaaagtaaaattattaatacatgatggataaatttatttatattggtttgatacttctgctctcaa 879  Q
    || |||||| |||| | ||||||| | ||| ||| |||  ||||  |||| |||| ||| |||| |||||||| ||||  |||||||||   | ||||||    
T  6555 aacaaatttcgttg-caaaaattagcataaataataaataaaaa--attactacaagattgatagatttatttgtatttatttgatactctcgatctcaa 6651  T
Q  880 taacaattatggtgaaaactttttcaacattaaaagtttttaagacaatagtcataaacaaattaaatggacattcagtttcttgcaaataatctatttg 979  Q
    ||||||   | | ||||  |||||||||| |||||    ||||||||||||||||| |||||||||||||||| | | |||||||||||||| ||||||     
T  6652 taacaacactagagaaacttttttcaacaataaaa---attaagacaatagtcatagacaaattaaatggacaatgaatttcttgcaaataacctattta 6748  T
Q  980 tttacatcggaagaaacattattaa 1004  Q
    |||||||  ||| | ||||||||||    
T  6749 tttacatttgaaaagacattattaa 6773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1709 (Bit Score: 55; Significance: 5e-22; HSPs: 1)
Name: scaffold1709
Description:

Target: scaffold1709; HSP #1
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 681 - 882
Target Start/End: Original strand, 1250 - 1451
Alignment:
Q  681 aggggtagccttggctaccccaaaaaatata-ttattcttcaattggttggtataaatttatatccgactacctcaaataataaatattaagccatccca 779  Q
    |||||||||||||||||||| |||||| ||| |||||||| || |||| |||||  |||| |||||| ||||  ||||||||||||||| | | | ||||    
T  1250 aggggtagccttggctacccaaaaaaaaataattattctttaagtggtcggtatgtatttttatccggctactccaaataataaatattgaactacccca 1349  T
Q  780 aataaatttagttgtcgaaaattaacttaagtaagaaagtaaaattattaatacatgatggataaatttatttatattggtttgatacttctgctctcaa 879  Q
    ||||||||| |||| | |||||||||  || |||  ||||||||  |||| |||| ||| |||| |||||||| |||| |||||||||| | | ||||||    
T  1350 aataaatttcgttg-caaaaattaacacaaataatgaagtaaaaaaattactacaagattgatagatttatttgtatttgtttgatactcccgatctcaa 1448  T
Q  880 taa 882  Q
    |||    
T  1449 taa 1451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0271 (Bit Score: 42; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0271
Description:

Target: scaffold0271; HSP #1
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 697 - 817
Target Start/End: Original strand, 20141 - 20262
Alignment:
Q  697 accccaaaaaatatattattcttcaattggttggtataaatttatatccgactacctcaaataataaatattaagccatcccaaataaatttag-ttgtc 795  Q
    ||||||||||||| |||||| || |||||||||||||||| ||| ||    ||||  ||||||||||||||| ||| | ||||||||||||| | |||||    
T  20141 accccaaaaaataaattatttttgaattggttggtataaaattacatttagctactccaaataataaatattgagctaccccaaataaatttggtttgtc 20240  T
Q  796 gaaaattaacttaagtaagaaa 817  Q
    |||||||| | ||| |||||||    
T  20241 gaaaattagcataaataagaaa 20262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1554 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold1554
Description:

Target: scaffold1554; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 840 - 934
Target Start/End: Original strand, 719 - 812
Alignment:
Q  840 gataaatttatttatattggtttgatacttctgctctcaataacaattatggtgaaaactttttcaacattaaaagtttttaagacaatagtcat 934  Q
    |||| |||||||| ||||||||||||| ||| | ||| ||||||||  || | |||| ||||||||||| ||||| || | ||||||||||||||    
T  719 gatagatttatttgtattggtttgatatttcgg-tctaaataacaacaatagagaaacctttttcaacaataaaaattatcaagacaatagtcat 812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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