View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7807_high_5 (Length: 472)

Name: NF7807_high_5
Description: NF7807
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7807_high_5
NF7807_high_5
[»] chr6 (17 HSPs)
chr6 (277-455)||(18661675-18661853)
chr6 (357-455)||(18667398-18667491)
chr6 (158-205)||(18661977-18662024)
chr6 (231-273)||(18661909-18661951)
chr6 (277-326)||(13329451-13329500)
chr6 (277-326)||(1398623-1398672)
chr6 (277-326)||(3291078-3291127)
chr6 (277-326)||(3786819-3786868)
chr6 (277-326)||(15965503-15965552)
chr6 (277-326)||(28948897-28948946)
chr6 (323-359)||(15965564-15965600)
chr6 (13-45)||(18662135-18662167)
chr6 (323-359)||(28948849-28948885)
chr6 (324-359)||(4487658-4487693)
chr6 (277-326)||(4487597-4487646)
chr6 (326-359)||(13329512-13329545)
chr6 (323-359)||(18661865-18661901)
[»] chr7 (33 HSPs)
chr7 (277-326)||(29610706-29610755)
chr7 (277-326)||(21718188-21718237)
chr7 (277-326)||(24228612-24228661)
chr7 (277-326)||(26941584-26941633)
chr7 (277-326)||(35752086-35752135)
chr7 (277-326)||(43489289-43489338)
chr7 (277-326)||(46817473-46817522)
chr7 (277-316)||(44659924-44659963)
chr7 (277-316)||(47906811-47906850)
chr7 (277-316)||(48085939-48085978)
chr7 (277-326)||(498240-498289)
chr7 (277-326)||(24923076-24923125)
chr7 (277-326)||(36816897-36816946)
chr7 (277-326)||(45237585-45237634)
chr7 (277-326)||(46103191-46103240)
chr7 (323-359)||(35752038-35752074)
chr7 (323-359)||(39453486-39453522)
chr7 (277-313)||(46898068-46898104)
chr7 (277-316)||(7876380-7876419)
chr7 (277-316)||(25037560-25037599)
chr7 (277-316)||(32556658-32556697)
chr7 (277-316)||(35484718-35484757)
chr7 (277-316)||(41855140-41855179)
chr7 (324-359)||(44659975-44660010)
chr7 (324-359)||(46817426-46817461)
chr7 (277-326)||(26371120-26371169)
chr7 (277-326)||(37128008-37128057)
chr7 (323-359)||(7876332-7876368)
chr7 (323-359)||(24923028-24923064)
chr7 (323-359)||(37128069-37128105)
chr7 (323-359)||(39323739-39323775)
chr7 (323-359)||(43489350-43489386)
chr7 (323-359)||(45237537-45237573)
[»] chr4 (30 HSPs)
chr4 (277-326)||(27873600-27873649)
chr4 (277-326)||(5117490-5117539)
chr4 (277-326)||(31881366-31881415)
chr4 (277-326)||(37239142-37239191)
chr4 (277-326)||(45633831-45633880)
chr4 (277-318)||(51981531-51981572)
chr4 (277-326)||(52461433-52461482)
chr4 (277-316)||(9997983-9998022)
chr4 (277-316)||(20351894-20351933)
chr4 (324-359)||(22620724-22620759)
chr4 (277-316)||(47811986-47812025)
chr4 (280-326)||(22620663-22620709)
chr4 (277-326)||(4486633-4486682)
chr4 (277-326)||(15060341-15060390)
chr4 (277-326)||(46708793-46708842)
chr4 (277-326)||(49014168-49014217)
chr4 (323-359)||(15060293-15060329)
chr4 (323-359)||(34552450-34552486)
chr4 (277-313)||(43891011-43891047)
chr4 (323-359)||(45633783-45633819)
chr4 (277-313)||(52688432-52688468)
chr4 (277-313)||(54715118-54715154)
chr4 (277-316)||(33289783-33289822)
chr4 (277-316)||(34552399-34552438)
chr4 (324-359)||(52688480-52688515)
chr4 (277-316)||(54216393-54216432)
chr4 (286-326)||(3293084-3293124)
chr4 (323-359)||(20351846-20351882)
chr4 (323-359)||(41632011-41632047)
chr4 (323-359)||(49014229-49014265)
[»] chr1 (23 HSPs)
chr1 (277-326)||(41895216-41895265)
chr1 (277-326)||(2657373-2657422)
chr1 (277-326)||(6626076-6626125)
chr1 (277-326)||(29770740-29770789)
chr1 (277-318)||(34752366-34752407)
chr1 (277-326)||(41467684-41467733)
chr1 (278-326)||(26472232-26472280)
chr1 (277-316)||(10928147-10928186)
chr1 (277-326)||(4243542-4243591)
chr1 (277-326)||(13281614-13281663)
chr1 (277-326)||(35991651-35991700)
chr1 (277-326)||(42234910-42234959)
chr1 (323-359)||(2657434-2657470)
chr1 (323-359)||(32448770-32448806)
chr1 (280-316)||(33073291-33073327)
chr1 (323-359)||(41467636-41467672)
chr1 (323-359)||(41895168-41895204)
chr1 (277-316)||(4953132-4953171)
chr1 (277-316)||(30289962-30290001)
chr1 (323-359)||(6626028-6626064)
chr1 (323-359)||(42234970-42235006)
chr1 (282-326)||(44293512-44293556)
chr1 (323-359)||(46967045-46967081)
[»] chr8 (20 HSPs)
chr8 (277-320)||(3211281-3211324)
chr8 (277-326)||(117381-117430)
chr8 (277-326)||(31940385-31940434)
chr8 (407-455)||(41492291-41492339)
chr8 (277-316)||(9713766-9713805)
chr8 (277-316)||(41425480-41425519)
chr8 (277-315)||(41843334-41843372)
chr8 (277-326)||(4975459-4975508)
chr8 (280-316)||(4447350-4447386)
chr8 (280-316)||(27243194-27243230)
chr8 (280-316)||(27254769-27254805)
chr8 (324-359)||(9713817-9713852)
chr8 (277-316)||(10378389-10378428)
chr8 (324-359)||(31940445-31940480)
chr8 (324-359)||(40458777-40458812)
chr8 (325-359)||(9509406-9509440)
chr8 (277-313)||(2379223-2379259)
chr8 (323-359)||(2379271-2379307)
chr8 (286-326)||(9509461-9509501)
chr8 (277-309)||(40649883-40649915)
[»] chr3 (34 HSPs)
chr3 (277-323)||(49130651-49130697)
chr3 (277-326)||(31286845-31286894)
chr3 (277-326)||(34279773-34279822)
chr3 (277-326)||(38156684-38156733)
chr3 (277-326)||(40022144-40022193)
chr3 (277-326)||(41635852-41635901)
chr3 (277-326)||(42589900-42589949)
chr3 (277-326)||(47510992-47511041)
chr3 (277-326)||(48534059-48534108)
chr3 (277-326)||(54401257-54401306)
chr3 (277-326)||(54707272-54707321)
chr3 (407-455)||(5685926-5685974)
chr3 (324-359)||(51224043-51224078)
chr3 (277-316)||(55000230-55000269)
chr3 (277-326)||(17665576-17665625)
chr3 (277-326)||(25641716-25641765)
chr3 (277-326)||(51416039-51416088)
chr3 (323-359)||(38156636-38156672)
chr3 (323-359)||(52756071-52756107)
chr3 (282-326)||(52756128-52756172)
chr3 (323-359)||(55000182-55000218)
chr3 (324-359)||(25641777-25641812)
chr3 (277-316)||(37028803-37028842)
chr3 (324-359)||(37028854-37028889)
chr3 (324-359)||(42589961-42589996)
chr3 (324-359)||(48534012-48534047)
chr3 (324-359)||(54707225-54707260)
chr3 (280-326)||(45058953-45058999)
chr3 (407-455)||(5664483-5664531)
chr3 (277-326)||(39141176-39141227)
chr3 (323-359)||(45059014-45059050)
chr3 (323-359)||(47510944-47510980)
chr3 (282-326)||(51224095-51224139)
chr3 (323-359)||(51416100-51416136)
[»] chr5 (26 HSPs)
chr5 (277-326)||(9424644-9424693)
chr5 (277-326)||(19295800-19295849)
chr5 (277-326)||(23195300-23195349)
chr5 (277-326)||(27503449-27503498)
chr5 (277-326)||(36365497-36365546)
chr5 (277-326)||(38015566-38015615)
chr5 (277-326)||(42658714-42658763)
chr5 (277-316)||(3656620-3656659)
chr5 (277-316)||(33617665-33617704)
chr5 (277-326)||(5497343-5497392)
chr5 (277-326)||(38492683-38492732)
chr5 (323-359)||(5497404-5497440)
chr5 (277-313)||(6206967-6207003)
chr5 (323-359)||(9424596-9424632)
chr5 (323-359)||(13957801-13957837)
chr5 (323-359)||(14972109-14972145)
chr5 (323-359)||(19295861-19295897)
chr5 (277-317)||(36948541-36948581)
chr5 (324-359)||(6973194-6973229)
chr5 (324-359)||(9374507-9374542)
chr5 (324-359)||(38015519-38015554)
chr5 (277-326)||(6973133-6973182)
chr5 (277-326)||(13957740-13957789)
chr5 (323-359)||(3466685-3466721)
chr5 (323-359)||(23195252-23195288)
chr5 (323-359)||(27503510-27503546)
[»] chr2 (29 HSPs)
chr2 (277-326)||(13543676-13543725)
chr2 (277-326)||(19428478-19428527)
chr2 (277-326)||(29687110-29687159)
chr2 (277-316)||(2688781-2688820)
chr2 (277-316)||(4258568-4258607)
chr2 (277-316)||(43899022-43899061)
chr2 (277-326)||(145351-145400)
chr2 (277-326)||(3711702-3711751)
chr2 (277-326)||(12333547-12333596)
chr2 (277-326)||(27764914-27764963)
chr2 (277-326)||(28641344-28641393)
chr2 (277-326)||(35158102-35158151)
chr2 (277-326)||(43356165-43356214)
chr2 (323-359)||(145412-145448)
chr2 (323-359)||(13543628-13543664)
chr2 (280-316)||(21734955-21734991)
chr2 (323-359)||(29687171-29687207)
chr2 (323-359)||(34249395-34249431)
chr2 (323-359)||(35158054-35158090)
chr2 (277-313)||(39103129-39103165)
chr2 (324-359)||(3711763-3711798)
chr2 (324-359)||(19428431-19428466)
chr2 (277-316)||(28566750-28566789)
chr2 (324-359)||(43898976-43899011)
chr2 (277-326)||(12730130-12730179)
chr2 (277-326)||(39301249-39301298)
chr2 (323-359)||(3266417-3266453)
chr2 (323-359)||(4258619-4258655)
chr2 (323-359)||(28641296-28641332)
[»] scaffold0721 (2 HSPs)
scaffold0721 (277-326)||(7161-7210)
scaffold0721 (323-359)||(7222-7258)


Alignment Details
Target: chr6 (Bit Score: 135; Significance: 4e-70; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 277 - 455
Target Start/End: Complemental strand, 18661853 - 18661675
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaactaggctacccataaaagaatgatgggtaatttgtgtaagcttaaacccg 376  Q
    |||| |||||||||||||||| |||||||||||||||||| ||| ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  18661853 tacatattagccacataagcacatattcatgaactatcttgaccccacaactaggctatccatgaaagaatgatgggtaatttgtgtaagcttaaacccg 18661754  T
Q  377 tttttacgtacttactatactatattccacgttaaatacctattttgtacaagttgtcgaaaagatttgtgtctaaact 455  Q
    |||||| ||||||| ||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  18661753 tttttatgtacttattatactatatttcgcgttagatacctattttgtacaagttgtcgaaaagatttgtgtctaaact 18661675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 357 - 455
Target Start/End: Complemental strand, 18667491 - 18667398
Alignment:
Q  357 tttgtgtaagcttaaacccgtttttacgtacttactatactatattccacgttaaatacctattttgtacaagttgtcgaaaagatttgtgtctaaact 455  Q
    |||||||||||||||| ||||||||||||||||||||||     ||||  |||||||||||||||||||||||||||| | ||||||||||||||||||    
T  18667491 tttgtgtaagcttaaagccgtttttacgtacttactata-----ttccgagttaaatacctattttgtacaagttgtctataagatttgtgtctaaact 18667398  T

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Target: chr6; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 158 - 205
Target Start/End: Complemental strand, 18662024 - 18661977
Alignment:
Q  158 gatggtgttcaacggggtgctaccgacagtcaacatcaattcaaataa 205  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  18662024 gatggtgttcaacggggtgctaccgacagtcaacatcgattcaaataa 18661977  T

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Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 231 - 273
Target Start/End: Complemental strand, 18661951 - 18661909
Alignment:
Q  231 agggtatcgccaaacaaaaggtaatgctcaatggtattactat 273  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  18661951 agggtatcgccaaacaaaaggtaatgctcaatggtattactat 18661909  T

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Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 326
Target Start/End: Complemental strand, 13329500 - 13329451
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    ||||||||||||||||||||| ||||| |||||||||||||||| |||||    
T  13329500 tacacattagccacataagcacatatttatgaactatcttaaccccacaa 13329451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 277 - 326
Target Start/End: Complemental strand, 1398672 - 1398623
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    |||| |||||||||||||||| |||||||| ||||||||| |||||||||    
T  1398672 tacatattagccacataagcacatattcatcaactatcttgacctcacaa 1398623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 277 - 326
Target Start/End: Complemental strand, 3291127 - 3291078
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    |||| |||||||||||||||| ||||| |||||||||||||||| |||||    
T  3291127 tacatattagccacataagcacatatttatgaactatcttaaccccacaa 3291078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 277 - 326
Target Start/End: Complemental strand, 3786868 - 3786819
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    ||||||||||||||||||||| ||||||||||||||| || ||| |||||    
T  3786868 tacacattagccacataagcacatattcatgaactatattgaccccacaa 3786819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 277 - 326
Target Start/End: Complemental strand, 15965552 - 15965503
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    |||||||||||||||||| || ||||||||||| |||||||||| |||||    
T  15965552 tacacattagccacataaacacatattcatgaagtatcttaaccccacaa 15965503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 277 - 326
Target Start/End: Original strand, 28948897 - 28948946
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    ||||||||||||||||||||| ||||||||||| |||||| ||| |||||    
T  28948897 tacacattagccacataagcatatattcatgaattatcttgaccccacaa 28948946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 323 - 359
Target Start/End: Complemental strand, 15965600 - 15965564
Alignment:
Q  323 acaactaggctacccataaaagaatgatgggtaattt 359  Q
    ||||||||||||||||| |||||||||||||||||||    
T  15965600 acaactaggctacccatgaaagaatgatgggtaattt 15965564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 45
Target Start/End: Complemental strand, 18662167 - 18662135
Alignment:
Q  13 ttggtggtggtcaataaaaatttaattatgtac 45  Q
    |||||||||||||||||||||||||||||||||    
T  18662167 ttggtggtggtcaataaaaatttaattatgtac 18662135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 323 - 359
Target Start/End: Original strand, 28948849 - 28948885
Alignment:
Q  323 acaactaggctacccataaaagaatgatgggtaattt 359  Q
    ||||||||||||||||| |||||||||||||||||||    
T  28948849 acaactaggctacccatgaaagaatgatgggtaattt 28948885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 359
Target Start/End: Complemental strand, 4487693 - 4487658
Alignment:
Q  324 caactaggctacccataaaagaatgatgggtaattt 359  Q
    |||||||||||||||| |||||||||||||||||||    
T  4487693 caactaggctacccatgaaagaatgatgggtaattt 4487658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 326
Target Start/End: Complemental strand, 4487646 - 4487597
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    |||||||||||||||| || | |||||||||||||||||| ||| |||||    
T  4487646 tacacattagccacatgagtacatattcatgaactatcttgaccccacaa 4487597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 359
Target Start/End: Complemental strand, 13329545 - 13329512
Alignment:
Q  326 actaggctacccataaaagaatgatgggtaattt 359  Q
    |||||||||||||| |||||||||||||||||||    
T  13329545 actaggctacccatgaaagaatgatgggtaattt 13329512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 323 - 359
Target Start/End: Complemental strand, 18661901 - 18661865
Alignment:
Q  323 acaactaggctacccataaaagaatgatgggtaattt 359  Q
    ||||||||||||||||| |||||||||||| ||||||    
T  18661901 acaactaggctacccatgaaagaatgatggataattt 18661865  T

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Target: chr7 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 277 - 326
Target Start/End: Complemental strand, 29610755 - 29610706
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  29610755 tacacattagccacataagcacatattcatgaactatcttaaccccacaa 29610706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 326
Target Start/End: Complemental strand, 21718237 - 21718188
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    ||||||||||||||||||||| |||||||||||||||||| ||| |||||    
T  21718237 tacacattagccacataagcacatattcatgaactatcttgaccccacaa 21718188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 326
Target Start/End: Complemental strand, 24228661 - 24228612
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    ||||||||||||||||||||| |||||||||||||||||| ||| |||||    
T  24228661 tacacattagccacataagcatatattcatgaactatcttgaccccacaa 24228612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 326
Target Start/End: Original strand, 26941584 - 26941633
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    ||||||||||||||||||||| |||||||||||||||||| ||| |||||    
T  26941584 tacacattagccacataagcacatattcatgaactatcttgaccccacaa 26941633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 326
Target Start/End: Original strand, 35752086 - 35752135
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    ||||||||||||||||||||| |||||||||||||||||| ||| |||||    
T  35752086 tacacattagccacataagcacatattcatgaactatcttgaccccacaa 35752135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 326
Target Start/End: Complemental strand, 43489338 - 43489289
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    ||||||||||||||||||||| |||||||||||||||||| ||| |||||    
T  43489338 tacacattagccacataagcacatattcatgaactatcttgaccccacaa 43489289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 326
Target Start/End: Original strand, 46817473 - 46817522
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    ||||||||||||||||||||| |||||||||||||||||| ||| |||||    
T  46817473 tacacattagccacataagcacatattcatgaactatcttgaccccacaa 46817522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 277 - 316
Target Start/End: Complemental strand, 44659963 - 44659924
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatctt 316  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  44659963 tacacattagccacataagcatatattcatgaactatctt 44659924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 277 - 316
Target Start/End: Original strand, 47906811 - 47906850
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatctt 316  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  47906811 tacacattagccacataagcacatattcatgaactatctt 47906850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 277 - 316
Target Start/End: Complemental strand, 48085978 - 48085939
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatctt 316  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  48085978 tacacattagccacataagcacatattcatgaactatctt 48085939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 277 - 326
Target Start/End: Original strand, 498240 - 498289
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    |||| |||||||||||||||| |||||||||||||||||| ||| |||||    
T  498240 tacatattagccacataagcacatattcatgaactatcttgaccccacaa 498289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 277 - 326
Target Start/End: Original strand, 24923076 - 24923125
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    ||||||||||||||||||||| ||||||||||| |||||| ||| |||||    
T  24923076 tacacattagccacataagcacatattcatgaattatcttgaccccacaa 24923125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 277 - 326
Target Start/End: Original strand, 36816897 - 36816946
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    |||| |||||||||||||||| |||||||||||||||||| ||| |||||    
T  36816897 tacatattagccacataagcacatattcatgaactatcttgaccccacaa 36816946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 277 - 326
Target Start/End: Original strand, 45237585 - 45237634
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    ||||||||| ||||||||||| ||||||||||| |||||| |||||||||    
T  45237585 tacacattaaccacataagcacatattcatgaattatcttgacctcacaa 45237634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 277 - 326
Target Start/End: Complemental strand, 46103240 - 46103191
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    ||||||||||||||||||||| ||||||||||||||| || ||| |||||    
T  46103240 tacacattagccacataagcacatattcatgaactattttgaccccacaa 46103191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 323 - 359
Target Start/End: Original strand, 35752038 - 35752074
Alignment:
Q  323 acaactaggctacccataaaagaatgatgggtaattt 359  Q
    ||||||||||||||||| |||||||||||||||||||    
T  35752038 acaactaggctacccatgaaagaatgatgggtaattt 35752074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 323 - 359
Target Start/End: Original strand, 39453486 - 39453522
Alignment:
Q  323 acaactaggctacccataaaagaatgatgggtaattt 359  Q
    ||||||||||||||||| |||||||||||||||||||    
T  39453486 acaactaggctacccatgaaagaatgatgggtaattt 39453522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 277 - 313
Target Start/End: Original strand, 46898068 - 46898104
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactat 313  Q
    ||||||||||||||||||||| |||||||||||||||    
T  46898068 tacacattagccacataagcacatattcatgaactat 46898104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 316
Target Start/End: Original strand, 7876380 - 7876419
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatctt 316  Q
    ||||||||||||||||||| | ||||||||||||||||||    
T  7876380 tacacattagccacataagtacatattcatgaactatctt 7876419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 316
Target Start/End: Original strand, 25037560 - 25037599
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatctt 316  Q
    ||||||| ||||||||||||| ||||||||||||||||||    
T  25037560 tacacatcagccacataagcacatattcatgaactatctt 25037599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 316
Target Start/End: Original strand, 32556658 - 32556697
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatctt 316  Q
    |||||||||| |||||||||| ||||||||||||||||||    
T  32556658 tacacattagtcacataagcacatattcatgaactatctt 32556697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 316
Target Start/End: Complemental strand, 35484757 - 35484718
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatctt 316  Q
    |||||||||| |||||||||| ||||||||||||||||||    
T  35484757 tacacattagtcacataagcacatattcatgaactatctt 35484718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 316
Target Start/End: Complemental strand, 41855179 - 41855140
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatctt 316  Q
    ||||||||||||||||||||| ||||| ||||||||||||    
T  41855179 tacacattagccacataagcatatatttatgaactatctt 41855140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 359
Target Start/End: Complemental strand, 44660010 - 44659975
Alignment:
Q  324 caactaggctacccataaaagaatgatgggtaattt 359  Q
    ||||||||||||||||||||||||||||| ||||||    
T  44660010 caactaggctacccataaaagaatgatggataattt 44659975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 359
Target Start/End: Original strand, 46817426 - 46817461
Alignment:
Q  324 caactaggctacccataaaagaatgatgggtaattt 359  Q
    |||||||||||||||| |||||||||||||||||||    
T  46817426 caactaggctacccatgaaagaatgatgggtaattt 46817461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 326
Target Start/End: Complemental strand, 26371169 - 26371120
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    |||||||||| |||||||||| ||||||||||||||| || ||| |||||    
T  26371169 tacacattagtcacataagcacatattcatgaactattttgaccccacaa 26371120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 326
Target Start/End: Complemental strand, 37128057 - 37128008
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    ||||||||||| ||||||||| ||||| |||||||||||| ||| |||||    
T  37128057 tacacattagctacataagcacatatttatgaactatcttgaccccacaa 37128008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 323 - 359
Target Start/End: Original strand, 7876332 - 7876368
Alignment:
Q  323 acaactaggctacccataaaagaatgatgggtaattt 359  Q
    |||||||||||||| || |||||||||||||||||||    
T  7876332 acaactaggctaccaatgaaagaatgatgggtaattt 7876368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 323 - 359
Target Start/End: Original strand, 24923028 - 24923064
Alignment:
Q  323 acaactaggctacccataaaagaatgatgggtaattt 359  Q
    ||||||||||||||||| |||||| ||||||||||||    
T  24923028 acaactaggctacccatgaaagaaggatgggtaattt 24923064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 323 - 359
Target Start/End: Complemental strand, 37128105 - 37128069
Alignment:
Q  323 acaactaggctacccataaaagaatgatgggtaattt 359  Q
    ||||||||||||||||| |||||||||||| ||||||    
T  37128105 acaactaggctacccatgaaagaatgatggataattt 37128069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 323 - 359
Target Start/End: Complemental strand, 39323775 - 39323739
Alignment:
Q  323 acaactaggctacccataaaagaatgatgggtaattt 359  Q
    ||||||||||||| ||| |||||||||||||||||||    
T  39323775 acaactaggctactcatgaaagaatgatgggtaattt 39323739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 323 - 359
Target Start/End: Complemental strand, 43489386 - 43489350
Alignment:
Q  323 acaactaggctacccataaaagaatgatgggtaattt 359  Q
    |||||||| |||||||| |||||||||||||||||||    
T  43489386 acaactagactacccatgaaagaatgatgggtaattt 43489350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 323 - 359
Target Start/End: Original strand, 45237537 - 45237573
Alignment:
Q  323 acaactaggctacccataaaagaatgatgggtaattt 359  Q
    ||||||| ||||||||||||||||||||| |||||||    
T  45237537 acaactaagctacccataaaagaatgatgagtaattt 45237573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 277 - 326
Target Start/End: Original strand, 27873600 - 27873649
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  27873600 tacacattagccacataagcacatattcatgaactatcttaaccccacaa 27873649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 326
Target Start/End: Original strand, 5117490 - 5117539
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    ||||||||||||||||||||| |||||||||||||||||| ||| |||||    
T  5117490 tacacattagccacataagcacatattcatgaactatcttgaccccacaa 5117539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 326
Target Start/End: Original strand, 31881366 - 31881415
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    ||||||||||||||||||||| |||||||||||||||||| ||| |||||    
T  31881366 tacacattagccacataagcacatattcatgaactatcttgaccccacaa 31881415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 326
Target Start/End: Original strand, 37239142 - 37239191
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    ||||||||||||||||||||| |||||||||||||||||| ||| |||||    
T  37239142 tacacattagccacataagcacatattcatgaactatcttgaccccacaa 37239191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 326
Target Start/End: Original strand, 45633831 - 45633880
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    ||||||||||||||||||||| |||||||||||||||||| ||| |||||    
T  45633831 tacacattagccacataagcacatattcatgaactatcttgaccccacaa 45633880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 318
Target Start/End: Original strand, 51981531 - 51981572
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaa 318  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  51981531 tacacattagccacataagcacatattcatgaactatcttaa 51981572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 326
Target Start/End: Complemental strand, 52461482 - 52461433
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    ||||||||||||||||||||| |||||||||||||||||| ||| |||||    
T  52461482 tacacattagccacataagcacatattcatgaactatcttgaccccacaa 52461433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 277 - 316
Target Start/End: Original strand, 9997983 - 9998022
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatctt 316  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  9997983 tacacattagccacataagcacatattcatgaactatctt 9998022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 277 - 316
Target Start/End: Original strand, 20351894 - 20351933
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatctt 316  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  20351894 tacacattagccacataagcacatattcatgaactatctt 20351933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 324 - 359
Target Start/End: Complemental strand, 22620759 - 22620724
Alignment:
Q  324 caactaggctacccataaaagaatgatgggtaattt 359  Q
    ||||||||||||||||||||||||||||||||||||    
T  22620759 caactaggctacccataaaagaatgatgggtaattt 22620724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 277 - 316
Target Start/End: Complemental strand, 47812025 - 47811986
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatctt 316  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  47812025 tacacattagccacataagcacatattcatgaactatctt 47811986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 326
Target Start/End: Complemental strand, 22620709 - 22620663
Alignment:
Q  280 acattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    |||||||||||||||||| |||||||||||||||||| ||| |||||    
T  22620709 acattagccacataagcacatattcatgaactatcttgaccccacaa 22620663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 277 - 326
Target Start/End: Original strand, 4486633 - 4486682
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    ||||||||||||||||||||| ||||||||||| |||||| ||| |||||    
T  4486633 tacacattagccacataagcacatattcatgaattatcttgaccccacaa 4486682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 277 - 326
Target Start/End: Original strand, 15060341 - 15060390
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    |||||||| |||||||||||| |||||||||||||||||| ||| |||||    
T  15060341 tacacattggccacataagcacatattcatgaactatcttgaccccacaa 15060390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 277 - 326
Target Start/End: Original strand, 46708793 - 46708842
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    |||||||||| |||||||||| |||||||||||||||||| ||| |||||    
T  46708793 tacacattagtcacataagcacatattcatgaactatcttgaccccacaa 46708842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 277 - 326
Target Start/End: Complemental strand, 49014217 - 49014168
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    ||||||||||||||||||| | |||||||||||||||||| ||| |||||    
T  49014217 tacacattagccacataagtacatattcatgaactatcttgaccccacaa 49014168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 323 - 359
Target Start/End: Original strand, 15060293 - 15060329
Alignment:
Q  323 acaactaggctacccataaaagaatgatgggtaattt 359  Q
    ||||||||||||||||| |||||||||||||||||||    
T  15060293 acaactaggctacccatgaaagaatgatgggtaattt 15060329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 323 - 359
Target Start/End: Complemental strand, 34552486 - 34552450
Alignment:
Q  323 acaactaggctacccataaaagaatgatgggtaattt 359  Q
    ||||||||||||||||| |||||||||||||||||||    
T  34552486 acaactaggctacccatgaaagaatgatgggtaattt 34552450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 277 - 313
Target Start/End: Complemental strand, 43891047 - 43891011
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactat 313  Q
    ||||||||||||||||||||| |||||||||||||||    
T  43891047 tacacattagccacataagcacatattcatgaactat 43891011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 323 - 359
Target Start/End: Original strand, 45633783 - 45633819
Alignment:
Q  323 acaactaggctacccataaaagaatgatgggtaattt 359  Q
    ||||||||||||||||| |||||||||||||||||||    
T  45633783 acaactaggctacccatgaaagaatgatgggtaattt 45633819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 277 - 313
Target Start/End: Complemental strand, 52688468 - 52688432
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactat 313  Q
    ||||||||||||||||||||| |||||||||||||||    
T  52688468 tacacattagccacataagcatatattcatgaactat 52688432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 277 - 313
Target Start/End: Complemental strand, 54715154 - 54715118
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactat 313  Q
    ||||||||||||||||||||| |||||||||||||||    
T  54715154 tacacattagccacataagcacatattcatgaactat 54715118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 316
Target Start/End: Complemental strand, 33289822 - 33289783
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatctt 316  Q
    |||||||||||||||||||||  |||||||||||||||||    
T  33289822 tacacattagccacataagcacgtattcatgaactatctt 33289783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 316
Target Start/End: Complemental strand, 34552438 - 34552399
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatctt 316  Q
    |||||||||||| |||||||| ||||||||||||||||||    
T  34552438 tacacattagccgcataagcacatattcatgaactatctt 34552399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 359
Target Start/End: Complemental strand, 52688515 - 52688480
Alignment:
Q  324 caactaggctacccataaaagaatgatgggtaattt 359  Q
    |||||||||||||||| |||||||||||||||||||    
T  52688515 caactaggctacccatgaaagaatgatgggtaattt 52688480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 316
Target Start/End: Complemental strand, 54216432 - 54216393
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatctt 316  Q
    ||||||||||| ||||||||| ||||||||||||||||||    
T  54216432 tacacattagcaacataagcacatattcatgaactatctt 54216393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 286 - 326
Target Start/End: Original strand, 3293084 - 3293124
Alignment:
Q  286 gccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    |||||||||||| |||||||||||||||||| ||| |||||    
T  3293084 gccacataagcacatattcatgaactatcttgaccccacaa 3293124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 323 - 359
Target Start/End: Original strand, 20351846 - 20351882
Alignment:
Q  323 acaactaggctacccataaaagaatgatgggtaattt 359  Q
    |||||||| |||||||| |||||||||||||||||||    
T  20351846 acaactagactacccatgaaagaatgatgggtaattt 20351882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 323 - 359
Target Start/End: Original strand, 41632011 - 41632047
Alignment:
Q  323 acaactaggctacccataaaagaatgatgggtaattt 359  Q
    ||||||||| ||||||| |||||||||||||||||||    
T  41632011 acaactaggatacccatgaaagaatgatgggtaattt 41632047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 323 - 359
Target Start/End: Complemental strand, 49014265 - 49014229
Alignment:
Q  323 acaactaggctacccataaaagaatgatgggtaattt 359  Q
    ||||||||||||||||| ||||||||||| |||||||    
T  49014265 acaactaggctacccatgaaagaatgatgagtaattt 49014229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 277 - 326
Target Start/End: Original strand, 41895216 - 41895265
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  41895216 tacacattagccacataagcacatattcatgaactatcttgacctcacaa 41895265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 326
Target Start/End: Complemental strand, 2657422 - 2657373
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    ||||||||||||||||||||| |||||||||||||||||| ||| |||||    
T  2657422 tacacattagccacataagcacatattcatgaactatcttgaccccacaa 2657373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 326
Target Start/End: Original strand, 6626076 - 6626125
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    ||||||||||||||||||||| |||||||||||||||||| ||| |||||    
T  6626076 tacacattagccacataagcacatattcatgaactatcttgaccccacaa 6626125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 326
Target Start/End: Complemental strand, 29770789 - 29770740
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    ||||||||||||||||||||| |||||||||||||||||| ||| |||||    
T  29770789 tacacattagccacataagcacatattcatgaactatcttgaccccacaa 29770740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 318
Target Start/End: Original strand, 34752366 - 34752407
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaa 318  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  34752366 tacacattagccacataagcacatattcatgaactatcttaa 34752407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 326
Target Start/End: Original strand, 41467684 - 41467733
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    ||||||||||||||||||||| |||||||||||||||||| ||| |||||    
T  41467684 tacacattagccacataagcacatattcatgaactatcttgaccccacaa 41467733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 278 - 326
Target Start/End: Original strand, 26472232 - 26472280
Alignment:
Q  278 acacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    |||||||||||||||||||| |||||||||||||||||| ||| |||||    
T  26472232 acacattagccacataagcacatattcatgaactatcttgaccccacaa 26472280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 277 - 316
Target Start/End: Complemental strand, 10928186 - 10928147
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatctt 316  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  10928186 tacacattagccacataagcacatattcatgaactatctt 10928147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 277 - 326
Target Start/End: Original strand, 4243542 - 4243591
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    ||||||||||||||||||||| |||||||| ||||||||| ||| |||||    
T  4243542 tacacattagccacataagcacatattcataaactatcttgaccccacaa 4243591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 277 - 326
Target Start/End: Original strand, 13281614 - 13281663
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    ||||||||||||||||||||| ||||||||||||||| || ||| |||||    
T  13281614 tacacattagccacataagcacatattcatgaactattttgaccccacaa 13281663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 277 - 326
Target Start/End: Original strand, 35991651 - 35991700
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    |||| |||||||||||||||| |||||||||||||||||| ||| |||||    
T  35991651 tacatattagccacataagcatatattcatgaactatcttgaccccacaa 35991700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 277 - 326
Target Start/End: Complemental strand, 42234959 - 42234910
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    ||||||||| ||||||||||| |||||||||||||||||| ||| |||||    
T  42234959 tacacattaaccacataagcacatattcatgaactatcttgaccccacaa 42234910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 323 - 359
Target Start/End: Complemental strand, 2657470 - 2657434
Alignment:
Q  323 acaactaggctacccataaaagaatgatgggtaattt 359  Q
    ||||||||||||||||| |||||||||||||||||||    
T  2657470 acaactaggctacccatgaaagaatgatgggtaattt 2657434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 323 - 359
Target Start/End: Complemental strand, 32448806 - 32448770
Alignment:
Q  323 acaactaggctacccataaaagaatgatgggtaattt 359  Q
    ||||||||||||||||| |||||||||||||||||||    
T  32448806 acaactaggctacccatgaaagaatgatgggtaattt 32448770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 280 - 316
Target Start/End: Complemental strand, 33073327 - 33073291
Alignment:
Q  280 acattagccacataagcagatattcatgaactatctt 316  Q
    |||||||||||||||||| ||||||||||||||||||    
T  33073327 acattagccacataagcacatattcatgaactatctt 33073291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 323 - 359
Target Start/End: Original strand, 41467636 - 41467672
Alignment:
Q  323 acaactaggctacccataaaagaatgatgggtaattt 359  Q
    ||||||||||||||||| |||||||||||||||||||    
T  41467636 acaactaggctacccatgaaagaatgatgggtaattt 41467672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 323 - 359
Target Start/End: Original strand, 41895168 - 41895204
Alignment:
Q  323 acaactaggctacccataaaagaatgatgggtaattt 359  Q
    ||||||||||||||||| |||||||||||||||||||    
T  41895168 acaactaggctacccatgaaagaatgatgggtaattt 41895204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 316
Target Start/End: Complemental strand, 4953171 - 4953132
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatctt 316  Q
    ||||||||| ||||||||||| ||||||||||||||||||    
T  4953171 tacacattaaccacataagcacatattcatgaactatctt 4953132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 316
Target Start/End: Original strand, 30289962 - 30290001
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatctt 316  Q
    ||||||||| ||||||||||| ||||||||||||||||||    
T  30289962 tacacattaaccacataagcacatattcatgaactatctt 30290001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 323 - 359
Target Start/End: Original strand, 6626028 - 6626064
Alignment:
Q  323 acaactaggctacccataaaagaatgatgggtaattt 359  Q
    ||||||||||||||||| |||||||||||| ||||||    
T  6626028 acaactaggctacccatgaaagaatgatggataattt 6626064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 323 - 359
Target Start/End: Complemental strand, 42235006 - 42234970
Alignment:
Q  323 acaactaggctacccataaaagaatgatgggtaattt 359  Q
    ||||||||||||||||| |||||||||||| ||||||    
T  42235006 acaactaggctacccatgaaagaatgatggataattt 42234970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 44293512 - 44293556
Alignment:
Q  282 attagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    |||||||||||||| | |||||||||||||||||| ||| |||||    
T  44293512 attagccacataagtacatattcatgaactatcttgaccccacaa 44293556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 323 - 359
Target Start/End: Original strand, 46967045 - 46967081
Alignment:
Q  323 acaactaggctacccataaaagaatgatgggtaattt 359  Q
    ||||||||| ||||||| |||||||||||||||||||    
T  46967045 acaactagggtacccatgaaagaatgatgggtaattt 46967081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 277 - 320
Target Start/End: Complemental strand, 3211324 - 3211281
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacc 320  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  3211324 tacacattagccacataagcacatattcatgaactatcttaacc 3211281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 326
Target Start/End: Original strand, 117381 - 117430
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    ||||||||||||||||||||| |||||||||||||||||| ||| |||||    
T  117381 tacacattagccacataagcacatattcatgaactatcttgaccccacaa 117430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 326
Target Start/End: Complemental strand, 31940434 - 31940385
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    ||||||||||||||||||||| |||||||||||||||||| ||| |||||    
T  31940434 tacacattagccacataagcacatattcatgaactatcttgaccccacaa 31940385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 407 - 455
Target Start/End: Original strand, 41492291 - 41492339
Alignment:
Q  407 gttaaatacctattttgtacaagttgtcgaaaagatttgtgtctaaact 455  Q
    ||||||||| |||||| ||||||||||| ||||||||||||||||||||    
T  41492291 gttaaatacatattttatacaagttgtctaaaagatttgtgtctaaact 41492339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 277 - 316
Target Start/End: Complemental strand, 9713805 - 9713766
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatctt 316  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  9713805 tacacattagccacataagcacatattcatgaactatctt 9713766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 277 - 316
Target Start/End: Original strand, 41425480 - 41425519
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatctt 316  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  41425480 tacacattagccacataagcacatattcatgaactatctt 41425519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 277 - 315
Target Start/End: Complemental strand, 41843372 - 41843334
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatct 315  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  41843372 tacacattagccacataagcacatattcatgaactatct 41843334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 277 - 326
Target Start/End: Original strand, 4975459 - 4975508
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    ||||||||||||| ||||||| |||||||||||||||||| ||| |||||    
T  4975459 tacacattagccatataagcacatattcatgaactatcttgaccccacaa 4975508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 280 - 316
Target Start/End: Original strand, 4447350 - 4447386
Alignment:
Q  280 acattagccacataagcagatattcatgaactatctt 316  Q
    |||||||||||||||||| ||||||||||||||||||    
T  4447350 acattagccacataagcacatattcatgaactatctt 4447386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 280 - 316
Target Start/End: Original strand, 27243194 - 27243230
Alignment:
Q  280 acattagccacataagcagatattcatgaactatctt 316  Q
    |||||||||||||||||| ||||||||||||||||||    
T  27243194 acattagccacataagcacatattcatgaactatctt 27243230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 280 - 316
Target Start/End: Original strand, 27254769 - 27254805
Alignment:
Q  280 acattagccacataagcagatattcatgaactatctt 316  Q
    |||||||||||||||||| ||||||||||||||||||    
T  27254769 acattagccacataagcacatattcatgaactatctt 27254805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 359
Target Start/End: Complemental strand, 9713852 - 9713817
Alignment:
Q  324 caactaggctacccataaaagaatgatgggtaattt 359  Q
    |||||||||||||||| |||||||||||||||||||    
T  9713852 caactaggctacccatgaaagaatgatgggtaattt 9713817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 316
Target Start/End: Complemental strand, 10378428 - 10378389
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatctt 316  Q
    |||| |||||||||||||||| ||||||||||||||||||    
T  10378428 tacatattagccacataagcacatattcatgaactatctt 10378389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 359
Target Start/End: Complemental strand, 31940480 - 31940445
Alignment:
Q  324 caactaggctacccataaaagaatgatgggtaattt 359  Q
    |||||||||||||||| |||||||||||||||||||    
T  31940480 caactaggctacccatgaaagaatgatgggtaattt 31940445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 359
Target Start/End: Original strand, 40458777 - 40458812
Alignment:
Q  324 caactaggctacccataaaagaatgatgggtaattt 359  Q
    |||||||||||||||| |||||||||||||||||||    
T  40458777 caactaggctacccatgaaagaatgatgggtaattt 40458812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 359
Target Start/End: Original strand, 9509406 - 9509440
Alignment:
Q  325 aactaggctacccataaaagaatgatgggtaattt 359  Q
    ||||||||||||||| |||||||||||||||||||    
T  9509406 aactaggctacccatgaaagaatgatgggtaattt 9509440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 277 - 313
Target Start/End: Complemental strand, 2379259 - 2379223
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactat 313  Q
    |||||||||| |||||||||| |||||||||||||||    
T  2379259 tacacattagtcacataagcacatattcatgaactat 2379223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 323 - 359
Target Start/End: Complemental strand, 2379307 - 2379271
Alignment:
Q  323 acaactaggctacccataaaagaatgatgggtaattt 359  Q
    |||||||||||| |||| |||||||||||||||||||    
T  2379307 acaactaggctatccatgaaagaatgatgggtaattt 2379271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 286 - 326
Target Start/End: Original strand, 9509461 - 9509501
Alignment:
Q  286 gccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    ||||||||| || |||||||||||||||||||||| |||||    
T  9509461 gccacataaacacatattcatgaactatcttaaccccacaa 9509501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 277 - 309
Target Start/End: Original strand, 40649883 - 40649915
Alignment:
Q  277 tacacattagccacataagcagatattcatgaa 309  Q
    ||||||||||||||||||||| |||||||||||    
T  40649883 tacacattagccacataagcacatattcatgaa 40649915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 277 - 323
Target Start/End: Complemental strand, 49130697 - 49130651
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctca 323  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||||    
T  49130697 tacacattagccacataagcacatattcatgaactatcttgacctca 49130651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 326
Target Start/End: Original strand, 31286845 - 31286894
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    ||||||||||||||||||||| |||||||||||||||||| ||| |||||    
T  31286845 tacacattagccacataagcacatattcatgaactatcttgaccccacaa 31286894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 326
Target Start/End: Original strand, 34279773 - 34279822
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    ||||||||||||||||||||| |||||||||||||||||| ||| |||||    
T  34279773 tacacattagccacataagcacatattcatgaactatcttgaccccacaa 34279822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 326
Target Start/End: Original strand, 38156684 - 38156733
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    ||||||||||||||||||||| |||||||||||||||||| ||| |||||    
T  38156684 tacacattagccacataagcacatattcatgaactatcttgaccccacaa 38156733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 326
Target Start/End: Complemental strand, 40022193 - 40022144
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    ||||||||||||||||||||| |||||||||||||||||| ||| |||||    
T  40022193 tacacattagccacataagcacatattcatgaactatcttgaccccacaa 40022144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 326
Target Start/End: Original strand, 41635852 - 41635901
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    ||||||||||||||||||||| |||||||||||||||||| ||| |||||    
T  41635852 tacacattagccacataagcacatattcatgaactatcttgaccccacaa 41635901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 326
Target Start/End: Complemental strand, 42589949 - 42589900
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    ||||||||||||||||||||| |||||||||||||||||| ||| |||||    
T  42589949 tacacattagccacataagcacatattcatgaactatcttgaccccacaa 42589900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 326
Target Start/End: Original strand, 47510992 - 47511041
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    ||||||||||||||||||||| |||||||||||||||||| ||| |||||    
T  47510992 tacacattagccacataagcacatattcatgaactatcttgaccccacaa 47511041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 326
Target Start/End: Original strand, 48534059 - 48534108
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    ||||||||||||||||||||| |||||||||||||||||| ||| |||||    
T  48534059 tacacattagccacataagcacatattcatgaactatcttgaccccacaa 48534108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 326
Target Start/End: Complemental strand, 54401306 - 54401257
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    ||||||||||||||||||||| |||||||||||||||||| ||| |||||    
T  54401306 tacacattagccacataagcacatattcatgaactatcttgaccccacaa 54401257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 326
Target Start/End: Original strand, 54707272 - 54707321
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    ||||||||||||||||||||| |||||||||||||||||| ||| |||||    
T  54707272 tacacattagccacataagcacatattcatgaactatcttgaccccacaa 54707321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 407 - 455
Target Start/End: Complemental strand, 5685974 - 5685926
Alignment:
Q  407 gttaaatacctattttgtacaagttgtcgaaaagatttgtgtctaaact 455  Q
    |||||||||||||||||| |||||||||  |||||||||||||||||||    
T  5685974 gttaaatacctattttgtgcaagttgtcttaaagatttgtgtctaaact 5685926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 324 - 359
Target Start/End: Original strand, 51224043 - 51224078
Alignment:
Q  324 caactaggctacccataaaagaatgatgggtaattt 359  Q
    ||||||||||||||||||||||||||||||||||||    
T  51224043 caactaggctacccataaaagaatgatgggtaattt 51224078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 277 - 316
Target Start/End: Original strand, 55000230 - 55000269
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatctt 316  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  55000230 tacacattagccacataagcacatattcatgaactatctt 55000269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 277 - 326
Target Start/End: Original strand, 17665576 - 17665625
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    ||||||||| ||||||||||| |||||||||||||||||| ||| |||||    
T  17665576 tacacattaaccacataagcatatattcatgaactatcttgaccccacaa 17665625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 277 - 326
Target Start/End: Complemental strand, 25641765 - 25641716
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    ||||||||||||||||||||| ||||| |||||||||||| ||| |||||    
T  25641765 tacacattagccacataagcacatatttatgaactatcttgaccccacaa 25641716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 277 - 326
Target Start/End: Complemental strand, 51416088 - 51416039
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    ||||||||||||||||||||| |||| ||||||||||||| ||| |||||    
T  51416088 tacacattagccacataagcacatatacatgaactatcttgaccccacaa 51416039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 323 - 359
Target Start/End: Original strand, 38156636 - 38156672
Alignment:
Q  323 acaactaggctacccataaaagaatgatgggtaattt 359  Q
    ||||||||||||||||| |||||||||||||||||||    
T  38156636 acaactaggctacccatgaaagaatgatgggtaattt 38156672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 323 - 359
Target Start/End: Original strand, 52756071 - 52756107
Alignment:
Q  323 acaactaggctacccataaaagaatgatgggtaattt 359  Q
    ||||||||||||||||| |||||||||||||||||||    
T  52756071 acaactaggctacccatgaaagaatgatgggtaattt 52756107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 52756128 - 52756172
Alignment:
Q  282 attagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    |||||||||||||||| |||||||||||||||||| ||| |||||    
T  52756128 attagccacataagcacatattcatgaactatcttgaccccacaa 52756172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 323 - 359
Target Start/End: Original strand, 55000182 - 55000218
Alignment:
Q  323 acaactaggctacccataaaagaatgatgggtaattt 359  Q
    ||||||||||||||||| |||||||||||||||||||    
T  55000182 acaactaggctacccatgaaagaatgatgggtaattt 55000218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 359
Target Start/End: Complemental strand, 25641812 - 25641777
Alignment:
Q  324 caactaggctacccataaaagaatgatgggtaattt 359  Q
    |||||||||||||||| |||||||||||||||||||    
T  25641812 caactaggctacccatgaaagaatgatgggtaattt 25641777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 316
Target Start/End: Complemental strand, 37028842 - 37028803
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatctt 316  Q
    |||||||||||||||||| || ||||||||||||||||||    
T  37028842 tacacattagccacataaacacatattcatgaactatctt 37028803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 359
Target Start/End: Complemental strand, 37028889 - 37028854
Alignment:
Q  324 caactaggctacccataaaagaatgatgggtaattt 359  Q
    |||||||||||||||| |||||||||||||||||||    
T  37028889 caactaggctacccatgaaagaatgatgggtaattt 37028854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 359
Target Start/End: Complemental strand, 42589996 - 42589961
Alignment:
Q  324 caactaggctacccataaaagaatgatgggtaattt 359  Q
    |||||||||||||||| |||||||||||||||||||    
T  42589996 caactaggctacccatgaaagaatgatgggtaattt 42589961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 359
Target Start/End: Original strand, 48534012 - 48534047
Alignment:
Q  324 caactaggctacccataaaagaatgatgggtaattt 359  Q
    |||||||||||||||| |||||||||||||||||||    
T  48534012 caactaggctacccatgaaagaatgatgggtaattt 48534047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 359
Target Start/End: Original strand, 54707225 - 54707260
Alignment:
Q  324 caactaggctacccataaaagaatgatgggtaattt 359  Q
    |||||||||||||||| |||||||||||||||||||    
T  54707225 caactaggctacccatgaaagaatgatgggtaattt 54707260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 326
Target Start/End: Complemental strand, 45058999 - 45058953
Alignment:
Q  280 acattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    |||||||| ||||||||| |||||||||||||||||| ||| |||||    
T  45058999 acattagcaacataagcacatattcatgaactatcttgaccccacaa 45058953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 407 - 455
Target Start/End: Complemental strand, 5664531 - 5664483
Alignment:
Q  407 gttaaatacctattttgtacaagttgtcgaaaagatttgtgtctaaact 455  Q
    ||||||||||| |||||| |||||||||  ||||||||| |||||||||    
T  5664531 gttaaatacctcttttgtgcaagttgtcttaaagatttgcgtctaaact 5664483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 277 - 326
Target Start/End: Original strand, 39141176 - 39141227
Alignment:
Q  277 tacacattagccacataag--cagatattcatgaactatcttaacctcacaa 326  Q
    |||||||||||||||||||  || |||||||||||||||||| ||| |||||    
T  39141176 tacacattagccacataagcacatatattcatgaactatcttgaccccacaa 39141227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 323 - 359
Target Start/End: Complemental strand, 45059050 - 45059014
Alignment:
Q  323 acaactaggctacccataaaagaatgatgggtaattt 359  Q
    ||||||||||| ||||| |||||||||||||||||||    
T  45059050 acaactaggctgcccatgaaagaatgatgggtaattt 45059014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 323 - 359
Target Start/End: Original strand, 47510944 - 47510980
Alignment:
Q  323 acaactaggctacccataaaagaatgatgggtaattt 359  Q
    ||||||||||||||||| ||||||||||| |||||||    
T  47510944 acaactaggctacccatgaaagaatgatgagtaattt 47510980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 51224095 - 51224139
Alignment:
Q  282 attagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    ||||| |||||||||| |||||||||||||||||| ||| |||||    
T  51224095 attagtcacataagcacatattcatgaactatcttgaccccacaa 51224139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 323 - 359
Target Start/End: Complemental strand, 51416136 - 51416100
Alignment:
Q  323 acaactaggctacccataaaagaatgatgggtaattt 359  Q
    ||||||||||||||||| ||||||||||| |||||||    
T  51416136 acaactaggctacccatgaaagaatgatgagtaattt 51416100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000003; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 326
Target Start/End: Original strand, 9424644 - 9424693
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    ||||||||||||||||||||| |||||||||||||||||| ||| |||||    
T  9424644 tacacattagccacataagcatatattcatgaactatcttgaccccacaa 9424693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 326
Target Start/End: Complemental strand, 19295849 - 19295800
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    ||||||||||||||||||||| |||| ||||||||||||||||| |||||    
T  19295849 tacacattagccacataagcacatatacatgaactatcttaaccccacaa 19295800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 326
Target Start/End: Original strand, 23195300 - 23195349
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    ||||||||||||||||||||| |||||||||||||||||| ||| |||||    
T  23195300 tacacattagccacataagcacatattcatgaactatcttgaccccacaa 23195349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 326
Target Start/End: Complemental strand, 27503498 - 27503449
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    ||||||||||||||||||||| |||||||||||||||||| ||| |||||    
T  27503498 tacacattagccacataagcacatattcatgaactatcttgaccccacaa 27503449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 326
Target Start/End: Original strand, 36365497 - 36365546
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    ||||||||||||||||||||| |||||||||||||||||| ||| |||||    
T  36365497 tacacattagccacataagcacatattcatgaactatcttgaccccacaa 36365546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 326
Target Start/End: Original strand, 38015566 - 38015615
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    ||||||||||||||||||||| |||||||||||||||||| ||| |||||    
T  38015566 tacacattagccacataagcacatattcatgaactatcttgaccccacaa 38015615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 326
Target Start/End: Original strand, 42658714 - 42658763
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    ||||||||||||||||||||| |||||||||||||||||| ||| |||||    
T  42658714 tacacattagccacataagcatatattcatgaactatcttgaccccacaa 42658763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 277 - 316
Target Start/End: Original strand, 3656620 - 3656659
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatctt 316  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  3656620 tacacattagccacataagcacatattcatgaactatctt 3656659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 277 - 316
Target Start/End: Complemental strand, 33617704 - 33617665
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatctt 316  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  33617704 tacacattagccacataagcacatattcatgaactatctt 33617665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 277 - 326
Target Start/End: Complemental strand, 5497392 - 5497343
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    ||||||||||||||||||||| ||||||||||||||| || ||| |||||    
T  5497392 tacacattagccacataagcacatattcatgaactattttgaccccacaa 5497343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 277 - 326
Target Start/End: Complemental strand, 38492732 - 38492683
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    |||||||||| |||||||||| |||||||||||||||||| ||| |||||    
T  38492732 tacacattagtcacataagcacatattcatgaactatcttgaccccacaa 38492683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 323 - 359
Target Start/End: Complemental strand, 5497440 - 5497404
Alignment:
Q  323 acaactaggctacccataaaagaatgatgggtaattt 359  Q
    ||||||||||||||||| |||||||||||||||||||    
T  5497440 acaactaggctacccatgaaagaatgatgggtaattt 5497404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 277 - 313
Target Start/End: Complemental strand, 6207003 - 6206967
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactat 313  Q
    ||||||||||||||||||||| |||||||||||||||    
T  6207003 tacacattagccacataagcacatattcatgaactat 6206967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 323 - 359
Target Start/End: Original strand, 9424596 - 9424632
Alignment:
Q  323 acaactaggctacccataaaagaatgatgggtaattt 359  Q
    ||||||||||||||||| |||||||||||||||||||    
T  9424596 acaactaggctacccatgaaagaatgatgggtaattt 9424632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 323 - 359
Target Start/End: Complemental strand, 13957837 - 13957801
Alignment:
Q  323 acaactaggctacccataaaagaatgatgggtaattt 359  Q
    ||||||||||||||||| |||||||||||||||||||    
T  13957837 acaactaggctacccatgaaagaatgatgggtaattt 13957801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 323 - 359
Target Start/End: Complemental strand, 14972145 - 14972109
Alignment:
Q  323 acaactaggctacccataaaagaatgatgggtaattt 359  Q
    ||||||||||||||||| |||||||||||||||||||    
T  14972145 acaactaggctacccatgaaagaatgatgggtaattt 14972109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 323 - 359
Target Start/End: Complemental strand, 19295897 - 19295861
Alignment:
Q  323 acaactaggctacccataaaagaatgatgggtaattt 359  Q
    ||||||||||||||||| |||||||||||||||||||    
T  19295897 acaactaggctacccatgaaagaatgatgggtaattt 19295861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 277 - 317
Target Start/End: Original strand, 36948541 - 36948581
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatctta 317  Q
    ||||||||||||||||||||| |||| ||||||||||||||    
T  36948541 tacacattagccacataagcacatatccatgaactatctta 36948581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 359
Target Start/End: Complemental strand, 6973229 - 6973194
Alignment:
Q  324 caactaggctacccataaaagaatgatgggtaattt 359  Q
    |||||||||||||||| |||||||||||||||||||    
T  6973229 caactaggctacccatgaaagaatgatgggtaattt 6973194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 359
Target Start/End: Original strand, 9374507 - 9374542
Alignment:
Q  324 caactaggctacccataaaagaatgatgggtaattt 359  Q
    |||||||||||||||| |||||||||||||||||||    
T  9374507 caactaggctacccatgaaagaatgatgggtaattt 9374542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 359
Target Start/End: Original strand, 38015519 - 38015554
Alignment:
Q  324 caactaggctacccataaaagaatgatgggtaattt 359  Q
    |||||||||||||||| |||||||||||||||||||    
T  38015519 caactaggctacccatgaaagaatgatgggtaattt 38015554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 326
Target Start/End: Complemental strand, 6973182 - 6973133
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    |||| ||||| |||||||||| |||||||||||||||||| ||| |||||    
T  6973182 tacatattagtcacataagcacatattcatgaactatcttgaccccacaa 6973133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 326
Target Start/End: Complemental strand, 13957789 - 13957740
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    |||||||||| |||||||||  |||||||||||||||||| ||| |||||    
T  13957789 tacacattagtcacataagcgcatattcatgaactatcttgaccccacaa 13957740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 323 - 359
Target Start/End: Original strand, 3466685 - 3466721
Alignment:
Q  323 acaactaggctacccataaaagaatgatgggtaattt 359  Q
    ||||||||| |||||||||||||||| ||||||||||    
T  3466685 acaactagggtacccataaaagaatggtgggtaattt 3466721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 323 - 359
Target Start/End: Original strand, 23195252 - 23195288
Alignment:
Q  323 acaactaggctacccataaaagaatgatgggtaattt 359  Q
    ||||||||||||||||| ||||||||| |||||||||    
T  23195252 acaactaggctacccatgaaagaatgacgggtaattt 23195288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 323 - 359
Target Start/End: Complemental strand, 27503546 - 27503510
Alignment:
Q  323 acaactaggctacccataaaagaatgatgggtaattt 359  Q
    ||||||||||||||||| ||||||||||| |||||||    
T  27503546 acaactaggctacccatgaaagaatgatgagtaattt 27503510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000003; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 326
Target Start/End: Original strand, 13543676 - 13543725
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    ||||||||||||||||||||| |||||||||||||||||| ||| |||||    
T  13543676 tacacattagccacataagcacatattcatgaactatcttgaccccacaa 13543725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 326
Target Start/End: Original strand, 19428478 - 19428527
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    ||||||||||||||||||||| |||||||||||||||||| ||| |||||    
T  19428478 tacacattagccacataagcacatattcatgaactatcttgaccccacaa 19428527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 326
Target Start/End: Complemental strand, 29687159 - 29687110
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    ||||||||||||||||||||| |||||||||||||||||| ||| |||||    
T  29687159 tacacattagccacataagcacatattcatgaactatcttgaccccacaa 29687110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 277 - 316
Target Start/End: Original strand, 2688781 - 2688820
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatctt 316  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  2688781 tacacattagccacataagcacatattcatgaactatctt 2688820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 277 - 316
Target Start/End: Complemental strand, 4258607 - 4258568
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatctt 316  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  4258607 tacacattagccacataagcacatattcatgaactatctt 4258568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 277 - 316
Target Start/End: Original strand, 43899022 - 43899061
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatctt 316  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  43899022 tacacattagccacataagcacatattcatgaactatctt 43899061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 277 - 326
Target Start/End: Complemental strand, 145400 - 145351
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    |||||||||||||||||||||  ||||||||||||||||| ||| |||||    
T  145400 tacacattagccacataagcacgtattcatgaactatcttgaccccacaa 145351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 277 - 326
Target Start/End: Complemental strand, 3711751 - 3711702
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    |||||||||||| |||||||| |||||||||||||||||| ||| |||||    
T  3711751 tacacattagccgcataagcacatattcatgaactatcttgaccccacaa 3711702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 277 - 326
Target Start/End: Original strand, 12333547 - 12333596
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    ||||||||||||||||||||| |||| ||||||||||||| ||| |||||    
T  12333547 tacacattagccacataagcacatatacatgaactatcttgaccccacaa 12333596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 277 - 326
Target Start/End: Original strand, 27764914 - 27764963
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    ||||||||||||||||||||| ||||||||||||||| || ||| |||||    
T  27764914 tacacattagccacataagcacatattcatgaactattttgaccccacaa 27764963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 277 - 326
Target Start/End: Original strand, 28641344 - 28641393
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    |||||||||||||||||| || |||||||||||||||||| ||| |||||    
T  28641344 tacacattagccacataaacatatattcatgaactatcttgaccccacaa 28641393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 277 - 326
Target Start/End: Original strand, 35158102 - 35158151
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    |||||||||| |||||||||| |||||||||||||||||| ||| |||||    
T  35158102 tacacattagtcacataagcacatattcatgaactatcttgaccccacaa 35158151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 277 - 326
Target Start/End: Complemental strand, 43356214 - 43356165
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    |||| |||||||||||||||| |||||||||||||||||| ||| |||||    
T  43356214 tacaaattagccacataagcacatattcatgaactatcttgaccccacaa 43356165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 323 - 359
Target Start/End: Complemental strand, 145448 - 145412
Alignment:
Q  323 acaactaggctacccataaaagaatgatgggtaattt 359  Q
    ||||||||||||||||| |||||||||||||||||||    
T  145448 acaactaggctacccatgaaagaatgatgggtaattt 145412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 323 - 359
Target Start/End: Original strand, 13543628 - 13543664
Alignment:
Q  323 acaactaggctacccataaaagaatgatgggtaattt 359  Q
    ||||||||||||||||| |||||||||||||||||||    
T  13543628 acaactaggctacccatgaaagaatgatgggtaattt 13543664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 280 - 316
Target Start/End: Original strand, 21734955 - 21734991
Alignment:
Q  280 acattagccacataagcagatattcatgaactatctt 316  Q
    |||||||||||||||||| ||||||||||||||||||    
T  21734955 acattagccacataagcacatattcatgaactatctt 21734991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 323 - 359
Target Start/End: Complemental strand, 29687207 - 29687171
Alignment:
Q  323 acaactaggctacccataaaagaatgatgggtaattt 359  Q
    ||||||||||||||||| |||||||||||||||||||    
T  29687207 acaactaggctacccatgaaagaatgatgggtaattt 29687171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 323 - 359
Target Start/End: Complemental strand, 34249431 - 34249395
Alignment:
Q  323 acaactaggctacccataaaagaatgatgggtaattt 359  Q
    ||||||||||||||||| |||||||||||||||||||    
T  34249431 acaactaggctacccatgaaagaatgatgggtaattt 34249395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 323 - 359
Target Start/End: Original strand, 35158054 - 35158090
Alignment:
Q  323 acaactaggctacccataaaagaatgatgggtaattt 359  Q
    ||||||||||||||||| |||||||||||||||||||    
T  35158054 acaactaggctacccatgaaagaatgatgggtaattt 35158090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 277 - 313
Target Start/End: Complemental strand, 39103165 - 39103129
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactat 313  Q
    ||||||||||||||||||||| |||||||||||||||    
T  39103165 tacacattagccacataagcacatattcatgaactat 39103129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 359
Target Start/End: Complemental strand, 3711798 - 3711763
Alignment:
Q  324 caactaggctacccataaaagaatgatgggtaattt 359  Q
    |||||||||||||||| |||||||||||||||||||    
T  3711798 caactaggctacccatgaaagaatgatgggtaattt 3711763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 359
Target Start/End: Original strand, 19428431 - 19428466
Alignment:
Q  324 caactaggctacccataaaagaatgatgggtaattt 359  Q
    |||||||||||||||| |||||||||||||||||||    
T  19428431 caactaggctacccatgaaagaatgatgggtaattt 19428466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 316
Target Start/End: Original strand, 28566750 - 28566789
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatctt 316  Q
    |||||||||| |||||||||| ||||||||||||||||||    
T  28566750 tacacattagtcacataagcacatattcatgaactatctt 28566789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 359
Target Start/End: Original strand, 43898976 - 43899011
Alignment:
Q  324 caactaggctacccataaaagaatgatgggtaattt 359  Q
    |||||||||||||||| |||||||||||||||||||    
T  43898976 caactaggctacccatgaaagaatgatgggtaattt 43899011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 326
Target Start/End: Complemental strand, 12730179 - 12730130
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    |||||||||| |||||||||| ||||| |||||||||||| ||| |||||    
T  12730179 tacacattagtcacataagcacatatttatgaactatcttgaccccacaa 12730130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 326
Target Start/End: Original strand, 39301249 - 39301298
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    |||||||||| || ||||||| |||||||||||||||||| ||| |||||    
T  39301249 tacacattagtcatataagcacatattcatgaactatcttgaccccacaa 39301298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 323 - 359
Target Start/End: Complemental strand, 3266453 - 3266417
Alignment:
Q  323 acaactaggctacccataaaagaatgatgggtaattt 359  Q
    ||||||||| ||||||| |||||||||||||||||||    
T  3266453 acaactaggttacccatgaaagaatgatgggtaattt 3266417  T

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Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 323 - 359
Target Start/End: Complemental strand, 4258655 - 4258619
Alignment:
Q  323 acaactaggctacccataaaagaatgatgggtaattt 359  Q
    ||||||||||||||||| || ||||||||||||||||    
T  4258655 acaactaggctacccatgaacgaatgatgggtaattt 4258619  T

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Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 323 - 359
Target Start/End: Original strand, 28641296 - 28641332
Alignment:
Q  323 acaactaggctacccataaaagaatgatgggtaattt 359  Q
    ||||||||||||||||| ||||||| |||||||||||    
T  28641296 acaactaggctacccatgaaagaataatgggtaattt 28641332  T

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Target: scaffold0721 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0721
Description:

Target: scaffold0721; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 277 - 326
Target Start/End: Complemental strand, 7210 - 7161
Alignment:
Q  277 tacacattagccacataagcagatattcatgaactatcttaacctcacaa 326  Q
    |||||||| |||||||||||| |||||||||||||||||| ||| |||||    
T  7210 tacacattggccacataagcacatattcatgaactatcttgaccccacaa 7161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0721; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 323 - 359
Target Start/End: Complemental strand, 7258 - 7222
Alignment:
Q  323 acaactaggctacccataaaagaatgatgggtaattt 359  Q
    ||||||||||||||||| |||||||||||||||||||    
T  7258 acaactaggctacccatgaaagaatgatgggtaattt 7222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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