View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7807_low_11 (Length: 367)
Name: NF7807_low_11
Description: NF7807
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7807_low_11 |
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Alignment Details
Target: chr3 (Bit Score: 332; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 332; E-Value: 0
Query Start/End: Original strand, 16 - 351
Target Start/End: Original strand, 14559558 - 14559893
Alignment:
| Q |
16 |
ctgtgtggaaattgccatgaggcaacaaatataggttaataagtccttacattcaatctgtcagctatctcttcttgatgattatgcttttctggaaact |
115 |
Q |
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| T |
14559558 |
ctgtgtggaaattgccatgaggcaacaaatataggttaataagtccttacattcaatctgtcagctatctcttcttgatgattatgcttttctggaaact |
14559657 |
T |
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| Q |
116 |
gcattgcacaatttctatttgtagtttggtctgattgcatggcttggtaccttgaatcaaagaaaataaatcatcagttgtcatagttcattgtcctcaa |
215 |
Q |
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| T |
14559658 |
gcattgcacaatttctatttgtagtttggtctgattgcatggcttggtaccttgaatcaaagaaaataaatcattagttgtcatagttcattgtcctcaa |
14559757 |
T |
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| Q |
216 |
agttgaacacaatttattaaaacaacaataattcaatttgaagtatttcagtaaaccttaaaccttagatttgtaagtttttatttggttcaaaatatgt |
315 |
Q |
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| T |
14559758 |
agttgaacacaatttattaaaacaacaataattcaatttgaagtatttcagtaaaccttaaaccttagatttgtaagtttttatttggttcaaaatatgt |
14559857 |
T |
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| Q |
316 |
acctagatattgaagaccaatgaaaatagaaatatt |
351 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
14559858 |
acctagatattgaagaccaatgaaaatagaaatatt |
14559893 |
T |
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