View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7807_low_24 (Length: 235)
Name: NF7807_low_24
Description: NF7807
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7807_low_24 |
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Alignment Details
Target: chr1 (Bit Score: 182; Significance: 2e-98; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 15 - 212
Target Start/End: Original strand, 1112328 - 1112524
Alignment:
| Q |
15 |
gagaagaaggtaaggatcaacaaaccattcaattcttaaagttacttgtttaccaagaaactattcaaccaaagagaatttcttgccaataacatcatta |
114 |
Q |
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| T |
1112328 |
gagaaggaggtaaggatcaacaaaccattcaattcttaaagttacttgtttaccaagaaactattcaaccaaagagaatttcttgccaataacatcatta |
1112427 |
T |
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| Q |
115 |
tctatacagagtcatgaatctcacttttcttgttttcttatttacaggataaacttttgattgctgctgtaaaaaagtataatggaaaaagttggaaa |
212 |
Q |
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| T |
1112428 |
tctatacagagtcatgaatctcacttttcttgttttcttatttacaggataaacttttgattgatgctgtaaaaaagtataatgg-aaaagttggaaa |
1112524 |
T |
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