View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7808_low_5 (Length: 358)
Name: NF7808_low_5
Description: NF7808
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7808_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 331; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 331; E-Value: 0
Query Start/End: Original strand, 1 - 350
Target Start/End: Original strand, 36996289 - 36996641
Alignment:
| Q |
1 |
cataggatgcctaagaataatgtatatagtttgcctgctttaaattagtttttgatacttgttactccttcattgtaaaacgattgatgagtgattctat |
100 |
Q |
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| T |
36996289 |
cataggatgcctaagaataatgtatatagtttgcctgctttaaattagtttttgatacttgttactccttcattgtaaaacgattgatgagtgattctat |
36996388 |
T |
|
| Q |
101 |
gaaagcacatggctgcgtcgacggacaccaattcttgataagaactgcgtgcatatattgaagaatctgattcgagaacaaccttgcttgtaaccattgt |
200 |
Q |
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| T |
36996389 |
gaaagcacatggctgcgtcgacggacactaattcttgataagaactgcatgcatatattgaagaatctgattcgagaacaaccttgcttgtaaccattgt |
36996488 |
T |
|
| Q |
201 |
cccattcagagacagaaccaagaaataatgctatatagggggtgaaaatttaacata---atgtaaaattgaagttattgtattttaattgtagatattt |
297 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
36996489 |
cccattcagagacagaaccaagaaataatgctatatagggggtgaaaatttaacatagatatgtaaaattgaagttattgtattttaattgtagatattt |
36996588 |
T |
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| Q |
298 |
ttcttccctaaaaaattgtagatatttttctcacataaaaatgcgagtattat |
350 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36996589 |
ttcttccctaaaaaattgtagatatttttctcacataaaaatgcgagtattat |
36996641 |
T |
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