View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF7810_high_4 (Length: 458)
Name: NF7810_high_4
Description: NF7810
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7810_high_4 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 414; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 414; E-Value: 0
Query Start/End: Original strand, 18 - 447
Target Start/End: Complemental strand, 36970760 - 36970331
Alignment:
| Q |
18 |
aaactgactgctagagattagttgaaaattgaaaacattctaggatgcattatttaatcactatagctcaaaacatcctatggatacttttatatactgc |
117 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36970760 |
aaactgactgccagagattagttgaaaattgaaaacattctaggatgcattatttaatcactatagctcaaaacatcctatggatacttttatatactgc |
36970661 |
T |
|
| Q |
118 |
cttaaatctgtttcctagaaaaaactccatattcatagaagttttacctcttctggccgtgccaattgagtgggtttcacactccttcttcgataaaccc |
217 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
36970660 |
cttaaatctgtttcctagaaaaaactccatattcatagaagttttacctctgctggccgtgccaattgagtgggcttcacactccttcttcgataaaccc |
36970561 |
T |
|
| Q |
218 |
tttttggctttatcttagactccattgggccaatcctgaagaagcaaaataagaaaaaattaatattcaaagagatattagttatatcgagagaaaaaat |
317 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36970560 |
tttttggctttatcttagactccattgggccaatcctgaagaagcaaaataagaaaaaattaatattcaaagagatattagttatatcgagagaaaaaat |
36970461 |
T |
|
| Q |
318 |
tgcaagacaaagattctcgatgcatggacattacattgtagaacacccatatcccgctccaaaaatacttgaaactgcaattccaatgtcctgccaagct |
417 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36970460 |
tgcaagacaaagattcttgatgcatggacattacattgtagaacacccatatcccgctccaaaaatacttgaaactgcaattccaatgtcctgccaagct |
36970361 |
T |
|
| Q |
418 |
attgagtttctgctgcaatcttctctgcta |
447 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
36970360 |
attgagtttctgctgcaatcttctctgcta |
36970331 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University