View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7810_high_9 (Length: 303)
Name: NF7810_high_9
Description: NF7810
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7810_high_9 |
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Alignment Details
Target: chr4 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 15 - 202
Target Start/End: Original strand, 52121333 - 52121520
Alignment:
| Q |
15 |
gagaagaaatagagaaaggagaattttaataagaggtgagtgacagagttggttgggattatgtcttcatgtgtttgtatttgcatcaacatgtatagtt |
114 |
Q |
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| T |
52121333 |
gagaagaaatagagaaaggagaattttaataagaggtgagtgacagagttggttgggattatgtcttcatgtgtttgtatttgcatcaacatgtatagtt |
52121432 |
T |
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| Q |
115 |
gtttctagtattaatgaacagctttcggtcaacattttaaaacatagtaattaacaagtgtgtgatcaaaacgcactctaatttgttt |
202 |
Q |
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| T |
52121433 |
gtttctagtattaatgaacagctttcggtcaacattttaaaacatagtaattaacaagtgtgtgatcaaaacgcactctaatttgttt |
52121520 |
T |
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