View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7811_high_14 (Length: 432)
Name: NF7811_high_14
Description: NF7811
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7811_high_14 |
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Alignment Details
Target: chr2 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 169 - 418
Target Start/End: Complemental strand, 12616644 - 12616395
Alignment:
| Q |
169 |
cctgcataaatatcccattattttggttattttcctacattacttctcctcatcatctttcacatattctctcttttcgtctccctcttcgtcccttcct |
268 |
Q |
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| T |
12616644 |
cctgcataaatatcccattattttcgttattttcctacattacttcccctcatcatctttcacatattctctcttttcgtctccctcttcgtcccttcct |
12616545 |
T |
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| Q |
269 |
ctctatttttcttgttataatattatatagtataaactataatttaccaacacaataacctatctcaaacccatattttgtcttctttctaaacactttg |
368 |
Q |
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|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
12616544 |
ctctatttttcttgttataatattatatagcataaactataatttaccaacacaataacctatctcaaacccatattttgtcttctttctaaacgctttg |
12616445 |
T |
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| Q |
369 |
tataccctttcactttattttcttagaagaaaattaacatggtggtggct |
418 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12616444 |
tataccctttcactttattttcttagaagaaaattaacatggtggtggct |
12616395 |
T |
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