View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7811_high_3 (Length: 537)

Name: NF7811_high_3
Description: NF7811
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7811_high_3
NF7811_high_3
[»] chr5 (12 HSPs)
chr5 (64-478)||(4417202-4417617)
chr5 (3-82)||(36337804-36337881)
chr5 (2-82)||(4151144-4151222)
chr5 (5-80)||(4417757-4417830)
chr5 (2-81)||(5226013-5226090)
chr5 (4-79)||(21344520-21344593)
chr5 (2-81)||(43585489-43585566)
chr5 (4-82)||(8694554-8694630)
chr5 (2-79)||(5089522-5089597)
chr5 (39-79)||(22473934-22473974)
chr5 (36-80)||(28907259-28907303)
chr5 (36-80)||(28943654-28943698)
[»] chr6 (12 HSPs)
chr6 (2-80)||(32364011-32364087)
chr6 (4-82)||(32710065-32710141)
chr6 (4-81)||(8785497-8785572)
chr6 (4-79)||(25371000-25371073)
chr6 (4-79)||(26597161-26597234)
chr6 (39-80)||(7498426-7498467)
chr6 (8-80)||(14804157-14804230)
chr6 (50-79)||(21478668-21478697)
chr6 (19-79)||(26575653-26575714)
chr6 (19-83)||(32364099-32364164)
chr6 (9-70)||(1935778-1935837)
chr6 (24-79)||(22341958-22342014)
[»] chr2 (20 HSPs)
chr2 (3-80)||(40669030-40669108)
chr2 (2-79)||(2795306-2795381)
chr2 (2-77)||(5717941-5718014)
chr2 (2-82)||(6006675-6006753)
chr2 (4-76)||(11160357-11160427)
chr2 (4-79)||(40846535-40846608)
chr2 (2-79)||(11160442-11160517)
chr2 (2-79)||(33425366-33425441)
chr2 (4-80)||(3373036-3373110)
chr2 (50-80)||(8079459-8079489)
chr2 (39-80)||(4101943-4101984)
chr2 (4-79)||(7993168-7993240)
chr2 (4-86)||(18967213-18967293)
chr2 (4-82)||(36396848-36396924)
chr2 (4-78)||(42263012-42263084)
chr2 (24-80)||(42755101-42755158)
chr2 (2-79)||(10237597-10237672)
chr2 (24-79)||(15287939-15287995)
chr2 (2-79)||(21208961-21209036)
chr2 (2-79)||(42579015-42579090)
[»] chr3 (14 HSPs)
chr3 (2-80)||(1126469-1126545)
chr3 (2-79)||(40326434-40326509)
chr3 (39-79)||(43883967-43884007)
chr3 (4-80)||(14626699-14626773)
chr3 (4-80)||(35455558-35455632)
chr3 (4-79)||(33638985-33639058)
chr3 (24-77)||(55198608-55198662)
chr3 (20-80)||(43556864-43556925)
chr3 (36-81)||(46843682-46843727)
chr3 (21-80)||(1676265-1676325)
chr3 (39-79)||(16894274-16894314)
chr3 (24-79)||(24350882-24350938)
chr3 (8-81)||(29352803-29352874)
chr3 (21-80)||(42790878-42790938)
[»] chr1 (11 HSPs)
chr1 (4-79)||(12568432-12568506)
chr1 (9-88)||(42761309-42761386)
chr1 (2-80)||(6169879-6169956)
chr1 (2-82)||(40907172-40907250)
chr1 (4-79)||(4974116-4974189)
chr1 (2-80)||(24015003-24015079)
chr1 (9-79)||(38847298-38847366)
chr1 (5-83)||(40328944-40329020)
chr1 (36-80)||(16661706-16661750)
chr1 (2-79)||(38149433-38149508)
chr1 (3-80)||(43147505-43147580)
[»] chr8 (9 HSPs)
chr8 (3-81)||(36826960-36827035)
chr8 (4-80)||(2827351-2827425)
chr8 (50-86)||(44872380-44872416)
chr8 (50-80)||(16382421-16382451)
chr8 (4-79)||(45441173-45441246)
chr8 (4-69)||(15715359-15715422)
chr8 (39-79)||(26492413-26492453)
chr8 (39-79)||(30245608-30245648)
chr8 (2-79)||(43483928-43484003)
[»] chr4 (22 HSPs)
chr4 (4-79)||(40545292-40545365)
chr4 (5-80)||(48472749-48472822)
chr4 (2-79)||(24156135-24156210)
chr4 (4-80)||(54927176-54927250)
chr4 (4-80)||(55229543-55229617)
chr4 (2-88)||(18328003-18328088)
chr4 (39-81)||(34595786-34595828)
chr4 (4-79)||(45861076-45861149)
chr4 (24-81)||(51394092-51394150)
chr4 (4-86)||(8014172-8014252)
chr4 (24-80)||(8560518-8560575)
chr4 (9-79)||(9011821-9011889)
chr4 (4-78)||(18327931-18328003)
chr4 (4-78)||(18437396-18437468)
chr4 (39-80)||(20792078-20792119)
chr4 (39-80)||(35003105-35003146)
chr4 (20-80)||(38224021-38224082)
chr4 (2-80)||(44639815-44639891)
chr4 (56-88)||(11347106-11347138)
chr4 (8-81)||(20787631-20787702)
chr4 (2-79)||(31914397-31914472)
chr4 (2-79)||(34709571-34709646)
[»] chr7 (12 HSPs)
chr7 (6-80)||(5212116-5212188)
chr7 (6-76)||(26743190-26743258)
chr7 (39-79)||(4187988-4188028)
chr7 (24-80)||(9140157-9140213)
chr7 (2-79)||(10595560-10595635)
chr7 (2-79)||(16100232-16100307)
chr7 (4-81)||(22526242-22526316)
chr7 (2-81)||(39976113-39976190)
chr7 (40-81)||(30005870-30005911)
chr7 (4-81)||(7208658-7208733)
chr7 (4-81)||(11909258-11909333)
chr7 (51-79)||(36711655-36711683)
[»] scaffold0075 (1 HSPs)
scaffold0075 (4-79)||(17067-17143)
[»] scaffold0047 (1 HSPs)
scaffold0047 (4-80)||(65915-65989)
[»] scaffold0009 (1 HSPs)
scaffold0009 (3-86)||(8268-8349)
[»] scaffold0121 (1 HSPs)
scaffold0121 (9-79)||(17430-17498)
[»] scaffold0002 (1 HSPs)
scaffold0002 (4-78)||(491847-491919)


Alignment Details
Target: chr5 (Bit Score: 316; Significance: 1e-178; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 64 - 478
Target Start/End: Complemental strand, 4417617 - 4417202
Alignment:
Q  64 aaaaacggagggagtataattttttcttaggaatcacaaacaccacctacccaacgcttctgtagcctgaaattcaactccaaatttataagatggatta 163  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  4417617 aaaaacggaggtagtataagtttttcttaggaatcacaaacaccacctacccaacgcttctgtagcctgaaattcaactccaaatttataagatgaatta 4417518  T
Q  164 aaatttaataatttttt-atctcttaatctaattgctctgaaatgtactgtacttcccttgcagaatgtacatcttnnnnnnnnntatttaactaggagc 262  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||         ||||||||||||| |    
T  4417517 aaatttaataatttttttatctcttaatctaattgctctgaactgtactgtacttcccttgcagaatgtacatcttaaaaaaaaatatttaactaggaac 4417418  T
Q  263 aatcaccgtattaggagcaaattttataaatatgaattagatccaaccgaagttctaagatgttattagcaaggccattccaatttaatttggaggctcc 362  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||||    
T  4417417 aatcaccgtattaggagcaaattttataaatatgaattagatccaatcgaaattctaagatgttattagcaaggccatcccaatttaatttggaggctcc 4417318  T
Q  363 gttcaaatattaaaaattaaaggaggcatcctctattacgggagttggttagtcgcggttgtcaaattgttatcttt---tattatatataactaataat 459  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||   |||||||||||||   ||||    
T  4417317 gttcaaatattaaaaattaaaggaggcatcctctattacgggagttagttagtcgcgcttgtcaaattgttatcttttactattatatataac---taat 4417221  T
Q  460 atgtttgggtcttgtagtg 478  Q
    |||||||||||||||||||    
T  4417220 atgtttgggtcttgtagtg 4417202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 3 - 82
Target Start/End: Original strand, 36337804 - 36337881
Alignment:
Q  3 atatgaaccacatacatcattattaaatgaatgat-ttaaaaagtgatttttatttatatttaaaaacggagggagtataa 82  Q
    ||||||||||||||||||||||   |||||||||  ||||||||||| ||||  |||||||||||||||||||||||||||    
T  36337804 atatgaaccacatacatcatta---aatgaatgaacttaaaaagtgaattttgcttatatttaaaaacggagggagtataa 36337881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 4151222 - 4151144
Alignment:
Q  2 aatatgaaccacatacatcattattaaatgaatgat-ttaaaaagtgatttttatttatatttaaaaacggagggagtataa 82  Q
    ||||||||||||||||||   |||||| |||||||  ||||||||| | ||||  ||||||||||||||||| |||||||||    
T  4151222 aatatgaaccacatacat---tattaattgaatgaacttaaaaagtcaattttgcttatatttaaaaacggatggagtataa 4151144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 5 - 80
Target Start/End: Complemental strand, 4417830 - 4417757
Alignment:
Q  5 atgaaccacatacatcattat-taaatgaatgatttaaaaagtgatttttatttatatttaaaaacggagggagtat 80  Q
    ||||||||||||||||||||  ||||||||     |||||| ||||||||||| ||||||||||||||||| |||||    
T  4417830 atgaaccacatacatcattaaataaatgaacc---taaaaaatgatttttattcatatttaaaaacggaggtagtat 4417757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 2 - 81
Target Start/End: Complemental strand, 5226090 - 5226013
Alignment:
Q  2 aatatgaaccacatacatcattattaaatgaatgatt-taaaaagtgatttttatttatatttaaaaacggagggagtata 81  Q
    |||||| ||||||||||||||||   ||||||||| | |||||||||| ||||  ||||||||  ||||||||||||||||    
T  5226090 aatatggaccacatacatcatta---aatgaatgaatctaaaaagtgaattttgcttatattttgaaacggagggagtata 5226013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 79
Target Start/End: Original strand, 21344520 - 21344593
Alignment:
Q  4 tatgaaccacatacatcattattaaatgaatg-atttaaaaagtgatttttatttatatttaaaaacggagggagta 79  Q
    |||||||||||||||||   |||||||||||| || |||||||| | ||||  ||||||||||| ||||||||||||    
T  21344520 tatgaaccacatacatc---attaaatgaatgaatctaaaaagtcaattttgcttatatttaaagacggagggagta 21344593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 2 - 81
Target Start/End: Complemental strand, 43585566 - 43585489
Alignment:
Q  2 aatatgaaccacatacatcattattaaatgaatgatt-taaaaagtgatttttatttatatttaaaaacggagggagtata 81  Q
    ||||||||||||||||||||||| |   |||||||   |||||||| |  ||| |||||||||||||||||||||||||||    
T  43585566 aatatgaaccacatacatcattaat---tgaatgaacctaaaaagtaaaatttgtttatatttaaaaacggagggagtata 43585489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 8694554 - 8694630
Alignment:
Q  4 tatgaaccacatacatcattat-taaatgaatgatttaaaaagtgatttttatttatatttaaaaacggagggagtataa 82  Q
    |||||||||||||||||||||  ||||||||     |||||||| | |||| |||||||||| |||||||||||||||||    
T  8694554 tatgaaccacatacatcattaaataaatgaacc---taaaaagtcaattttgtttatatttagaaacggagggagtataa 8694630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 5089522 - 5089597
Alignment:
Q  2 aatatgaaccacatacatcattattaaatgaatgatt-taaaaagtgatttttatttatatttaaaaacggagggagta 79  Q
    |||||| ||||||||||||||||   ||||||| | | |||||| | | ||||||||||||||||||||||||| ||||    
T  5089522 aatatggaccacatacatcatta---aatgaataaatctaaaaaatcaattttatttatatttaaaaacggaggaagta 5089597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 39 - 79
Target Start/End: Complemental strand, 22473974 - 22473934
Alignment:
Q  39 taaaaagtgatttttatttatatttaaaaacggagggagta 79  Q
    |||||||| | ||||||||||||||||||| ||||||||||    
T  22473974 taaaaagtcaattttatttatatttaaaaatggagggagta 22473934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 28907259 - 28907303
Alignment:
Q  36 atttaaaaagtgatttttatttatatttaaaaacggagggagtat 80  Q
    ||||||||||||| |||| |||||||||  |||||||||||||||    
T  28907259 atttaaaaagtgaattttgtttatatttttaaacggagggagtat 28907303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 28943654 - 28943698
Alignment:
Q  36 atttaaaaagtgatttttatttatatttaaaaacggagggagtat 80  Q
    ||||||||||||| |||| |||||||||  |||||||||||||||    
T  28943654 atttaaaaagtgaattttgtttatatttttaaacggagggagtat 28943698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 5e-17; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 32364087 - 32364011
Alignment:
Q  2 aatatgaaccacatacatcattattaaatgaatga-tttaaaaagtgatttttatttatatttaaaaacggagggagtat 80  Q
    |||||||||||||||||||||||   ||||||||| |||||||||| | |||| ||||||||||||||||||||||||||    
T  32364087 aatatgaaccacatacatcatta---aatgaatgaatttaaaaagtcaattttgtttatatttaaaaacggagggagtat 32364011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 32710141 - 32710065
Alignment:
Q  4 tatgaaccacatacatcattattaaatgaatgatt-taaaaagtgatttttatttatatttaaaaacggagggagtataa 82  Q
    ||||||||||||||||   |||||||||||||||  |||||||||| ||||| |||||||| ||||||||||||||||||    
T  32710141 tatgaaccacatacat---tattaaatgaatgatcctaaaaagtgaattttacttatattttaaaacggagggagtataa 32710065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 81
Target Start/End: Complemental strand, 8785572 - 8785497
Alignment:
Q  4 tatgaaccacatacatcattattaaatgaatga-tttaaaaagtgatttttatttatatttaaaaacggagggagtata 81  Q
    ||||||||||||||||||||||   |||||| | |||||||||| | ||||| ||||||||||||||| ||||| ||||    
T  8785572 tatgaaccacatacatcattat---atgaattaatttaaaaagtcaattttacttatatttaaaaacgaagggaatata 8785497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 79
Target Start/End: Complemental strand, 25371073 - 25371000
Alignment:
Q  4 tatgaaccacatacatcattattaaatgaatgat-ttaaaaagtgatttttatttatatttaaaaacggagggagta 79  Q
    |||||||||||||||||||||   |||||||||  ||||||||||| |||| |||||||||  ||||||||| ||||    
T  25371073 tatgaaccacatacatcatta---aatgaatgaacttaaaaagtgaattttgtttatattttgaaacggaggaagta 25371000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 79
Target Start/End: Complemental strand, 26597234 - 26597161
Alignment:
Q  4 tatgaaccacatacatcattattaaatgaatgatt-taaaaagtgatttttatttatatttaaaaacggagggagta 79  Q
    |||||||||||||||||||||   |||||||||   |||||||||| |||| |||||||||  ||||||||||||||    
T  26597234 tatgaaccacatacatcatta---aatgaatgaacctaaaaagtgaattttgtttatattttgaaacggagggagta 26597161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 80
Target Start/End: Complemental strand, 7498467 - 7498426
Alignment:
Q  39 taaaaagtgatttttatttatatttaaaaacggagggagtat 80  Q
    |||||||| | ||||| |||||||||||||||||||||||||    
T  7498467 taaaaagtcaattttacttatatttaaaaacggagggagtat 7498426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 80
Target Start/End: Complemental strand, 14804230 - 14804157
Alignment:
Q  8 aaccacatacatcatta-ttaaatgaatgatttaaaaagtgatttttatttatatttaaaaacggagggagtat 80  Q
    ||||||||||||||||| || ||||||  || |||||||| |  |||| |||||||| ||||||||||||||||    
T  14804230 aaccacatacatcattaattgaatgaaaaatctaaaaagtaaaatttacttatattttaaaacggagggagtat 14804157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 79
Target Start/End: Original strand, 21478668 - 21478697
Alignment:
Q  50 ttttatttatatttaaaaacggagggagta 79  Q
    ||||||||||||||||||||||||||||||    
T  21478668 ttttatttatatttaaaaacggagggagta 21478697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 26575714 - 26575653
Alignment:
Q  19 tcattattaaatgaatgatt-taaaaagtgatttttatttatatttaaaaacggagggagta 79  Q
    ||||||||||| |||||| | |||||| | | |||| |||||||||||||||||||||||||    
T  26575714 tcattattaaacgaatgaatctaaaaaatcaattttgtttatatttaaaaacggagggagta 26575653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 83
Target Start/End: Original strand, 32364099 - 32364164
Alignment:
Q  19 tcattattaaatgaatgatt-taaaaagtgatttttatttatatttaaaaacggagggagtataat 83  Q
    |||||||||||||||| |   |||||||| | ||||  ||||||||||||||||||||||||||||    
T  32364099 tcattattaaatgaattaacctaaaaagtaaattttgcttatatttaaaaacggagggagtataat 32364164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 1935778 - 1935837
Alignment:
Q  9 accacatacatcattattaaatgaatgatttaaaaa-gtgatttttatttatatttaaaaacg 70  Q
    ||||||||||||||||   ||||||||| ||||||| || | |||||||||||||||||||||    
T  1935778 accacatacatcatta---aatgaatgaattaaaaaagtcaattttatttatatttaaaaacg 1935837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 22342014 - 22341958
Alignment:
Q  24 attaaatgaatgatt-taaaaagtgatttttatttatatttaaaaacggagggagta 79  Q
    ||||||||||||| | |||||||||| ||||  |||||||| |||||||||||||||    
T  22342014 attaaatgaatgaatctaaaaagtgaattttgcttatattttaaaacggagggagta 22341958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 40669030 - 40669108
Alignment:
Q  3 atatgaaccacatacatcattattaaatgaatg-atttaaaaagtgatttttatttatatttaaaaacggagggagtat 80  Q
    ||||| |||||||||||||| |||||||||||| || |||||||| | ||||  ||||||||| |||||||||||||||    
T  40669030 atatgtaccacatacatcatcattaaatgaatgaatctaaaaagtaaattttgcttatatttagaaacggagggagtat 40669108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 79
Target Start/End: Complemental strand, 2795381 - 2795306
Alignment:
Q  2 aatatgaaccacatacatcatta-ttaaatgaatgatttaaaaagtgatttttatttatatttaaaaacggagggagta 79  Q
    ||||||||||||||||||||||| ||||||||||   ||||||||| || |||| ||||||||| ||| ||||||||||    
T  2795381 aatatgaaccacatacatcattaattaaatgaat---ttaaaaagtcatatttacttatatttagaaatggagggagta 2795306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 5717941 - 5718014
Alignment:
Q  2 aatatgaaccacatacatcattattaaatgaatgatttaaaaagtgatttttatttatatttaaaaacggagggag 77  Q
    ||||| ||||||||||||||||| ||||  ||  ||||||||||| | ||||| ||||||||||||||||||||||    
T  5717941 aatataaaccacatacatcattaataaaataa--atttaaaaagtcaattttacttatatttaaaaacggagggag 5718014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 6006753 - 6006675
Alignment:
Q  2 aatatgaaccacatacatcattattaaatgaatgatt-taaaaagtgatttttatttatatttaaaaacggagggagtataa 82  Q
    |||||| ||||||||||||||||   ||| ||||| | |||||||| | |||||||||||||||||||||||| ||||||||    
T  6006753 aatatgtaccacatacatcatta---aatcaatgaatctaaaaagtcaattttatttatatttaaaaacggagagagtataa 6006675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 11160427 - 11160357
Alignment:
Q  4 tatgaaccacatacatcattattaaatgaatgatt-taaaaagtgatttttatttatatttaaaaacggaggga 76  Q
    ||||||||||||||||   ||||||||||||||   |||||| |||||||| ||||||||||||||||||||||    
T  11160427 tatgaaccacatacat---tattaaatgaatgaacctaaaaaatgatttttgtttatatttaaaaacggaggga 11160357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 79
Target Start/End: Original strand, 40846535 - 40846608
Alignment:
Q  4 tatgaaccacatacatcattattaaatgaatgatt-taaaaagtgatttttatttatatttaaaaacggagggagta 79  Q
    |||||||||||||||||||||   |||||||||   |||||||||| |||| ||||||||| |||||||||||||||    
T  40846535 tatgaaccacatacatcatta---aatgaatgaacctaaaaagtgaattttgtttatattttaaaacggagggagta 40846608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 11160442 - 11160517
Alignment:
Q  2 aatatgaaccacatacatcattattaaatgaatgatt-taaaaagtgatttttatttatatttaaaaacggagggagta 79  Q
    ||||||||||||||||||||| |   |||||||||   |||||||| ||||||| ||||||||||||| ||||||||||    
T  11160442 aatatgaaccacatacatcatca---aatgaatgaacctaaaaagtaatttttacttatatttaaaaatggagggagta 11160517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 33425366 - 33425441
Alignment:
Q  2 aatatgaaccacatacatcattattaaatgaatga-tttaaaaagtgatttttatttatatttaaaaacggagggagta 79  Q
    |||||||| ||||||||||||||   ||||||||| |||||||||| | ||||  ||||||||||||||||| ||||||    
T  33425366 aatatgaatcacatacatcatta---aatgaatgaatttaaaaagtcaattttgcttatatttaaaaacggatggagta 33425441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 80
Target Start/End: Original strand, 3373036 - 3373110
Alignment:
Q  4 tatgaaccacatacatcattattaaatgaatgat-ttaaaaagtgatttttatttatatttaaaaacggagggagtat 80  Q
    |||||||||||||||||||||   |||||||||  ||||||||||| ||||| ||||||||  | |||||||||||||    
T  3373036 tatgaaccacatacatcatta---aatgaatgaacttaaaaagtgaattttacttatattttgagacggagggagtat 3373110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 50 - 80
Target Start/End: Original strand, 8079459 - 8079489
Alignment:
Q  50 ttttatttatatttaaaaacggagggagtat 80  Q
    |||||||||||||||||||||||||||||||    
T  8079459 ttttatttatatttaaaaacggagggagtat 8079489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 80
Target Start/End: Complemental strand, 4101984 - 4101943
Alignment:
Q  39 taaaaagtgatttttatttatatttaaaaacggagggagtat 80  Q
    |||||||| | ||||| |||||||||||||||||||||||||    
T  4101984 taaaaagtcaattttacttatatttaaaaacggagggagtat 4101943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 79
Target Start/End: Original strand, 7993168 - 7993240
Alignment:
Q  4 tatgaaccacatacatcattattaaatgaatgatttaaaaagtgatttttatttatatttaaaaacggagggagta 79  Q
    |||||||||||||||||||||   |||||||||  |||||| | | ||||| ||||||||||| ||| ||||||||    
T  7993168 tatgaaccacatacatcatta---aatgaatgacctaaaaaattaattttacttatatttaaagacgaagggagta 7993240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 86
Target Start/End: Complemental strand, 18967293 - 18967213
Alignment:
Q  4 tatgaaccacatacatcattattaaatgaatgatt-taaaaagtgatttttatttatatttaaaaacggagggagtataatttt 86  Q
    |||||||||||||||||||||   ||||||| | | |||||| | | ||||| ||||||||||| ||||||||||||| |||||    
T  18967293 tatgaaccacatacatcatta---aatgaataaatctaaaaaatcaattttacttatatttaaatacggagggagtatcatttt 18967213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 36396924 - 36396848
Alignment:
Q  4 tatgaaccacatacatcattattaaatgaatgatt-taaaaagtgatttttatttatatttaaaaacggagggagtataa 82  Q
    |||||||||||||||||||||   ||||||| |   |||||||||| ||||||||||||||  ||||| |||||||||||    
T  36396924 tatgaaccacatacatcatta---aatgaataaacctaaaaagtgaattttatttatattttgaaacgtagggagtataa 36396848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 42263084 - 42263012
Alignment:
Q  4 tatgaaccacatacatcattattaaatgaatg-atttaaaaagtgatttttatttatatttaaaaacggagggagt 78  Q
    |||||||||||||||||   |||||||||||| ||||||||| ||| ||||  ||||||||  |||||||||||||    
T  42263084 tatgaaccacatacatc---attaaatgaatgaatttaaaaaatgaattttgcttatattttgaaacggagggagt 42263012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 42755101 - 42755158
Alignment:
Q  24 attaaatgaatgat-ttaaaaagtgatttttatttatatttaaaaacggagggagtat 80  Q
    |||||||||||||  ||||||||| | |||| |||||||||||| |||||||||||||    
T  42755101 attaaatgaatgaaattaaaaagttaattttgtttatatttaaagacggagggagtat 42755158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 2 - 79
Target Start/End: Complemental strand, 10237672 - 10237597
Alignment:
Q  2 aatatgaaccacatacatcattattaaatgaatgatt-taaaaagtgatttttatttatatttaaaaacggagggagta 79  Q
    ||||||||||||||||||   ||||||||||||||   |||||||| | ||||| ||||||||||| |||||| |||||    
T  10237672 aatatgaaccacatacat---tattaaatgaatgaacctaaaaagtcaattttacttatatttaaagacggagtgagta 10237597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 15287995 - 15287939
Alignment:
Q  24 attaaatgaatga-tttaaaaagtgatttttatttatatttaaaaacggagggagta 79  Q
    |||||||| |||| |||||||||| ||||||  ||||||||||||||||| ||||||    
T  15287995 attaaatggatgaatttaaaaagttatttttgcttatatttaaaaacggaaggagta 15287939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 21208961 - 21209036
Alignment:
Q  2 aatatgaaccacatacatcattattaaatgaatgatt-taaaaagtgatttttatttatatttaaaaacggagggagta 79  Q
    |||||| ||||||||||||||||   |||||||||   |||||||||| ||||  |||||||| |||||||||||||||    
T  21208961 aatatggaccacatacatcatta---aatgaatgaacctaaaaagtgaattttgcttatattttaaaacggagggagta 21209036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 2 - 79
Target Start/End: Complemental strand, 42579090 - 42579015
Alignment:
Q  2 aatatgaaccacatacatcatta-ttaaatgaatgatttaaaaagtgatttttatttatatttaaaaacggagggagta 79  Q
    |||||| || ||||||||||||| ||||||||||   ||||||||| |  |||||||||||||| ||||||| ||||||    
T  42579090 aatatggactacatacatcattaattaaatgaat---ttaaaaagtaaaatttatttatatttagaaacggaaggagta 42579015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000003; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 1126469 - 1126545
Alignment:
Q  2 aatatgaaccacatacatcattattaaatgaatga-tttaaaaagtgatttttatttatatttaaaaacggagggagtat 80  Q
    |||||||||||||||||||||||   ||||||||| |||||||||||| | ||  |||||||| ||||||||||||||||    
T  1126469 aatatgaaccacatacatcatta---aatgaatgaatttaaaaagtgaatcttgcttatattttaaaacggagggagtat 1126545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 79
Target Start/End: Complemental strand, 40326509 - 40326434
Alignment:
Q  2 aatatgaaccacatacatcatta-ttaaatgaatgatttaaaaagtgatttttatttatatttaaaaacggagggagta 79  Q
    ||||||||||||||||||||||| || ||||||| |   ||||||| | ||||||||||||||||||| ||||||||||    
T  40326509 aatatgaaccacatacatcattaattgaatgaatca---aaaaagtcaattttatttatatttaaaaatggagggagta 40326434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 43883967 - 43884007
Alignment:
Q  39 taaaaagtgatttttatttatatttaaaaacggagggagta 79  Q
    |||||||| | ||||||||||||||||||||||||||||||    
T  43883967 taaaaagttaattttatttatatttaaaaacggagggagta 43884007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 80
Target Start/End: Original strand, 14626699 - 14626773
Alignment:
Q  4 tatgaaccacatacatcattattaaatgaatga-tttaaaaagtgatttttatttatatttaaaaacggagggagtat 80  Q
    ||||||||||||||||||||| |   ||||||| |||||||||| | ||||  ||||||||||| |||||||||||||    
T  14626699 tatgaaccacatacatcattaat---tgaatgaatttaaaaagtcaattttgcttatatttaaagacggagggagtat 14626773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 35455632 - 35455558
Alignment:
Q  4 tatgaaccacatacatcattattaaatgaatgatt-taaaaagtgatttttatttatatttaaaaacggagggagtat 80  Q
    |||||||||||||||||||||   |||||||||   |||||||||| ||||  |||||||| ||||||||||||||||    
T  35455632 tatgaaccacatacatcatta---aatgaatgaacataaaaagtgaattttgcttatattttaaaacggagggagtat 35455558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 79
Target Start/End: Original strand, 33638985 - 33639058
Alignment:
Q  4 tatgaaccacatacatcattattaaatgaatgatt-taaaaagtgatttttatttatatttaaaaacggagggagta 79  Q
    |||| ||||||||||||||||   |||||||||   |||||||||| ||||  ||||||||||||||||||||||||    
T  33638985 tatggaccacatacatcatta---aatgaatgaacctaaaaagtgaattttgcttatatttaaaaacggagggagta 33639058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 55198662 - 55198608
Alignment:
Q  24 attaaatgaatgatt-taaaaagtgatttttatttatatttaaaaacggagggag 77  Q
    ||||||||||||| | |||||||| | ||||| ||||||||||||||||||||||    
T  55198662 attaaatgaatgaatctaaaaagtcaattttacttatatttaaaaacggagggag 55198608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 80
Target Start/End: Complemental strand, 43556925 - 43556864
Alignment:
Q  20 cattattaaatgaatgatt-taaaaagtgatttttatttatatttaaaaacggagggagtat 80  Q
    |||||||||||||||||   |||||||||||||||  |||||||| |||||||| |||||||    
T  43556925 cattattaaatgaatgaacctaaaaagtgatttttgcttatattttaaaacggaaggagtat 43556864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 46843682 - 46843727
Alignment:
Q  36 atttaaaaagtgatttttatttatatttaaaaacggagggagtata 81  Q
    ||||||||||| | ||||  ||||||||||||||||||||||||||    
T  46843682 atttaaaaagtcaattttgcttatatttaaaaacggagggagtata 46843727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 21 - 80
Target Start/End: Complemental strand, 1676325 - 1676265
Alignment:
Q  21 attattaaatgaatgatt-taaaaagtgatttttatttatatttaaaaacggagggagtat 80  Q
    |||||||| ||||||| | |||||||| | ||||||||||||||||||||| || ||||||    
T  1676325 attattaagtgaatgaatctaaaaagtcaattttatttatatttaaaaacgaagagagtat 1676265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 16894274 - 16894314
Alignment:
Q  39 taaaaagtgatttttatttatatttaaaaacggagggagta 79  Q
    |||||||| | |||| |||||||||||||||||||||||||    
T  16894274 taaaaagtcaattttgtttatatttaaaaacggagggagta 16894314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 24350882 - 24350938
Alignment:
Q  24 attaaatgaatgat-ttaaaaagtgatttttatttatatttaaaaacggagggagta 79  Q
    |||||||||||||  ||||||||| | ||||  ||||||||||||||||||||||||    
T  24350882 attaaatgaatgaacttaaaaagtcaattttccttatatttaaaaacggagggagta 24350938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 29352803 - 29352874
Alignment:
Q  8 aaccacatacatcattattaaatgaatgatt-taaaaagtgatttttatttatatttaaaaacggagggagtata 81  Q
    |||||||||||||||||   |||||||||   |||||| | | ||||| ||||||||||||||||||||||||||    
T  29352803 aaccacatacatcatta---aatgaatgaacctaaaaaataaattttacttatatttaaaaacggagggagtata 29352874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 21 - 80
Target Start/End: Complemental strand, 42790938 - 42790878
Alignment:
Q  21 attattaaatgaatgatt-taaaaagtgatttttatttatatttaaaaacggagggagtat 80  Q
    ||||||||||||||||   |||||| | |||||| |||||||||||||||| |||||||||    
T  42790938 attattaaatgaatgaacctaaaaattcatttttgtttatatttaaaaacgaagggagtat 42790878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000003; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 4 - 79
Target Start/End: Complemental strand, 12568506 - 12568432
Alignment:
Q  4 tatgaaccacatacatcattattaaatgaatga-tttaaaaagtgatttttatttatatttaaaaacggagggagta 79  Q
    ||||||||||||||||| |||  |||||||||| |||||||||||| ||||  |||||||| |||||||||||||||    
T  12568506 tatgaaccacatacatcctta--aaatgaatgaatttaaaaagtgaattttgcttatattttaaaacggagggagta 12568432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 42761309 - 42761386
Alignment:
Q  9 accacatacatcattattaaatgaatgat-ttaaaaagtgatttttatttatatttaaaaacggagggagtataatttttt 88  Q
    ||||||||||||||||   |||||||||  ||||||||| | ||||| |||||||| ||||||||||||||||||| ||||    
T  42761309 accacatacatcatta---aatgaatgaacttaaaaagtaaattttacttatattttaaaacggagggagtataatatttt 42761386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 6169879 - 6169956
Alignment:
Q  2 aatatgaaccacatacatcatta-ttaaatgaatgatttaaaaagtgatttttatttatatttaaaaacggagggagtat 80  Q
    ||||| ||||||||||||||||| || ||||||   || ||||| | | |||||||||||||||||||||||||||||||    
T  6169879 aatattaaccacatacatcattaattgaatgaac--ttaaaaaaatcaattttatttatatttaaaaacggagggagtat 6169956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 40907250 - 40907172
Alignment:
Q  2 aatatgaaccacatacatcatt-attaaatgaatgatttaaaaagtgatttttatttatatttaaaaacggagggagtataa 82  Q
    |||||||||||||||||||||| |||||||||| |   |||||||| | ||||  ||||||||| |||||||| ||||||||    
T  40907250 aatatgaaccacatacatcattaattaaatgaacg---taaaaagtcaatttttcttatatttagaaacggagagagtataa 40907172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 79
Target Start/End: Original strand, 4974116 - 4974189
Alignment:
Q  4 tatgaaccacatacatcattattaaatgaatg-atttaaaaagtgatttttatttatatttaaaaacggagggagta 79  Q
    |||||||||||||||||   |||||||||||| || |||||||| | ||||  ||||||| ||||||||||||||||    
T  4974116 tatgaaccacatacatc---attaaatgaatgaatctaaaaagtcaattttgcttatattaaaaaacggagggagta 4974189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 24015079 - 24015003
Alignment:
Q  2 aatatgaaccacatacatcattattaaatgaatg-atttaaaaagtgatttttatttatatttaaaaacggagggagtat 80  Q
    |||||||||||||||||||   |||||||||||| |  |||||| ||| ||||||||||||||  | |||||||||||||    
T  24015079 aatatgaaccacatacatc---attaaatgaatgaacctaaaaaatgaattttatttatattttgatacggagggagtat 24015003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 38847366 - 38847298
Alignment:
Q  9 accacatacatcattattaaatgaatgat-ttaaaaagtgatttttatttatatttaaaaacggagggagta 79  Q
    ||||||||||||||||   |||||||||  ||||||| | ||||||  ||||||||||||||||||||||||    
T  38847366 accacatacatcatta---aatgaatgaacttaaaaaattatttttgcttatatttaaaaacggagggagta 38847298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 83
Target Start/End: Original strand, 40328944 - 40329020
Alignment:
Q  5 atgaaccacatacatcattattaaatgaatgatt-taaaaagtgatttttatttatatttaaaaacggagggagtataat 83  Q
    |||||| ||||||||||||| |   ||||||| | |||||||| |  ||| |||||||||||||||||||||||||||||    
T  40328944 atgaactacatacatcattaat---tgaatgaatctaaaaagtaaaatttgtttatatttaaaaacggagggagtataat 40329020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 16661706 - 16661750
Alignment:
Q  36 atttaaaaagtgatttttatttatatttaaaaacggagggagtat 80  Q
    ||||||||||||| |||| |||||||||  |||||||||||||||    
T  16661706 atttaaaaagtgaattttgtttatatttttaaacggagggagtat 16661750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 38149433 - 38149508
Alignment:
Q  2 aatatgaaccacatacatcattattaaatgaatgat-ttaaaaagtgatttttatttatatttaaaaacggagggagta 79  Q
    |||||| ||||||||||||||||   |||||||||  ||||||| ||| ||||  |||||||| |||||||||||||||    
T  38149433 aatatggaccacatacatcatta---aatgaatgaacttaaaaaatgaattttgcttatattttaaaacggagggagta 38149508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 43147505 - 43147580
Alignment:
Q  3 atatgaaccacatacatcattattaaatgaatgatt-taaaaagtgatttttatttatatttaaaaacggagggagtat 80  Q
    ||||| ||||||||||||||||   |||||||||   |||||||||| ||||  |||||||| ||||||||||||||||    
T  43147505 atatggaccacatacatcatta---aatgaatgaacataaaaagtgaattttgcttatattttaaaacggagggagtat 43147580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.00000000001; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 36827035 - 36826960
Alignment:
Q  3 atatgaaccacatacatcattattaaatgaatgatttaaaaagtgatttttatttatatttaaaaacggagggagtata 81  Q
    ||||| ||||||||||||||||   |||||||||  |||||| | | |||| |||||||||||||||||||||||||||    
T  36827035 atatggaccacatacatcatta---aatgaatgaactaaaaaatcaattttgtttatatttaaaaacggagggagtata 36826960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 2827425 - 2827351
Alignment:
Q  4 tatgaaccacatacatcattattaaatgaatgat-ttaaaaagtgatttttatttatatttaaaaacggagggagtat 80  Q
    |||||||||||||||||||||   |||||||||  ||||||||| | ||||| |||||||||||||||||| ||||||    
T  2827425 tatgaaccacatacatcatta---aatgaatgaacttaaaaagtcaattttacttatatttaaaaacggagagagtat 2827351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 50 - 86
Target Start/End: Original strand, 44872380 - 44872416
Alignment:
Q  50 ttttatttatatttaaaaacggagggagtataatttt 86  Q
    ||||||||||||||||||||||||||||||| |||||    
T  44872380 ttttatttatatttaaaaacggagggagtatcatttt 44872416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 50 - 80
Target Start/End: Complemental strand, 16382451 - 16382421
Alignment:
Q  50 ttttatttatatttaaaaacggagggagtat 80  Q
    |||||||||||||||||||||||||||||||    
T  16382451 ttttatttatatttaaaaacggagggagtat 16382421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 79
Target Start/End: Original strand, 45441173 - 45441246
Alignment:
Q  4 tatgaaccacatacatcattattaaatgaatgatt-taaaaagtgatttttatttatatttaaaaacggagggagta 79  Q
    |||||||||||||||||||||   |||||||||   |||||||| | |||||||||||||| || ||||||||||||    
T  45441173 tatgaaccacatacatcatta---aatgaatgaaactaaaaagtaaattttatttatattttaacacggagggagta 45441246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 15715422 - 15715359
Alignment:
Q  4 tatgaaccacatacatcattattaaatgaatgatt-taaaaagtgatttttatttatatttaaaaac 69  Q
    |||||| ||||||||||||||   ||||||||| | |||||||| | ||||||||||||||||||||    
T  15715422 tatgaatcacatacatcatta---aatgaatgaatctaaaaagtaaattttatttatatttaaaaac 15715359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 26492413 - 26492453
Alignment:
Q  39 taaaaagtgatttttatttatatttaaaaacggagggagta 79  Q
    |||||||| | |||| |||||||||||||||||||||||||    
T  26492413 taaaaagtaaattttgtttatatttaaaaacggagggagta 26492453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 30245608 - 30245648
Alignment:
Q  39 taaaaagtgatttttatttatatttaaaaacggagggagta 79  Q
    |||||||||| ||||| |||||||| |||||||||||||||    
T  30245608 taaaaagtgaattttacttatattttaaaacggagggagta 30245648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 2 - 79
Target Start/End: Complemental strand, 43484003 - 43483928
Alignment:
Q  2 aatatgaaccacatacatcatt-attaaatgaatgatttaaaaagtgatttttatttatatttaaaaacggagggagta 79  Q
    |||||||||||||||||||||| ||| |||||   || ||||||||||  |||  |||||||||| |||||||||||||    
T  43484003 aatatgaaccacatacatcattaattgaatga---atctaaaaagtgaaatttgcttatatttaagaacggagggagta 43483928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 35; Significance: 0.0000000002; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 79
Target Start/End: Complemental strand, 40545365 - 40545292
Alignment:
Q  4 tatgaaccacatacatcattattaaatgaatga-tttaaaaagtgatttttatttatatttaaaaacggagggagta 79  Q
    ||||||||| |||||||||||   ||||||||| |||||||||| | ||||| ||||||||||| ||||||||||||    
T  40545365 tatgaaccaaatacatcatta---aatgaatgaatttaaaaagtcaattttacttatatttaaagacggagggagta 40545292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 80
Target Start/End: Complemental strand, 48472822 - 48472749
Alignment:
Q  5 atgaaccacatacatcattattaaatgaatgat-ttaaaaagtgatttttatttatatttaaaaacggagggagtat 80  Q
    ||||||||||||||||||||   |||||||||  ||||||||| | ||||| ||||||||||||||||||| |||||    
T  48472822 atgaaccacatacatcatta---aatgaatgaacttaaaaagtcaattttacttatatttaaaaacggaggaagtat 48472749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 79
Target Start/End: Complemental strand, 24156210 - 24156135
Alignment:
Q  2 aatatgaaccacatacatcattattaaatgaatgatt-taaaaagtgatttttatttatatttaaaaacggagggagta 79  Q
    |||||||||||||||||||||||   |||||||||   |||||||| | ||||  ||||||||||||||||||||||||    
T  24156210 aatatgaaccacatacatcatta---aatgaatgaacctaaaaagtcaattttgcttatatttaaaaacggagggagta 24156135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 80
Target Start/End: Original strand, 54927176 - 54927250
Alignment:
Q  4 tatgaaccacatacatcattattaaatgaatgatt-taaaaagtgatttttatttatatttaaaaacggagggagtat 80  Q
    |||||||||||||||||||||   ||||||||||  |||||||||| ||||  ||||||||  |||||||||||||||    
T  54927176 tatgaaccacatacatcatta---aatgaatgatcctaaaaagtgaattttgcttatattttgaaacggagggagtat 54927250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 55229617 - 55229543
Alignment:
Q  4 tatgaaccacatacatcattattaaatgaatgatt-taaaaagtgatttttatttatatttaaaaacggagggagtat 80  Q
    |||||||||||||||||||||   ||||||||| | | |||||||| ||||  |||||||||||||||||| ||||||    
T  55229617 tatgaaccacatacatcatta---aatgaatgaatctgaaaagtgaattttgcttatatttaaaaacggagagagtat 55229543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 18328003 - 18328088
Alignment:
Q  2 aatatgaaccacatacatcattattaaatgaatgatt-taaaaagtgatttttatttatattt-aaaaacggagggagtataatttttt 88  Q
    |||||| ||||||||||||||||   ||||||||| | || ||||| | ||||| |||||||| |||||||||||||||||||| ||||    
T  18328003 aatatggaccacatacatcatta---aatgaatgaatctagaaagtaaattttacttatattttaaaaacggagggagtataatatttt 18328088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 39 - 81
Target Start/End: Original strand, 34595786 - 34595828
Alignment:
Q  39 taaaaagtgatttttatttatatttaaaaacggagggagtata 81  Q
    |||||||| | |||| |||||||||||||||||||||||||||    
T  34595786 taaaaagtcaattttgtttatatttaaaaacggagggagtata 34595828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 79
Target Start/End: Original strand, 45861076 - 45861149
Alignment:
Q  4 tatgaaccacatacatcattattaaatgaatg-atttaaaaagtgatttttatttatatttaaaaacggagggagta 79  Q
    |||||||||||||||||   |||||||||||| || |||||||||| ||||  ||||||||  ||||||||||||||    
T  45861076 tatgaaccacatacatc---attaaatgaatgaatctaaaaagtgaattttgcttatattttgaaacggagggagta 45861149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 51394150 - 51394092
Alignment:
Q  24 attaaatgaatgatt-taaaaagtgatttttatttatatttaaaaacggagggagtata 81  Q
    ||||||||||||| | |||||||| | ||||| ||||||||||||||||||| ||||||    
T  51394150 attaaatgaatgaatataaaaagtcaattttacttatatttaaaaacggaggaagtata 51394092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 86
Target Start/End: Complemental strand, 8014252 - 8014172
Alignment:
Q  4 tatgaaccacatacatcattattaaatgaatgatt-taaaaagtgatttttatttatatttaaaaacggagggagtataatttt 86  Q
    |||||||||||||||||||||   |||||||||   |||||||| | ||||  ||||||||||| |||||||||||||| ||||    
T  8014252 tatgaaccacatacatcatta---aatgaatgaacctaaaaagtcaattttgcttatatttaaatacggagggagtatactttt 8014172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 8560518 - 8560575
Alignment:
Q  24 attaaatgaatgat-ttaaaaagtgatttttatttatatttaaaaacggagggagtat 80  Q
    |||||||||||||  ||||||||| | ||||| ||||||| |||||||||||||||||    
T  8560518 attaaatgaatgaacttaaaaagtcaattttagttatattaaaaaacggagggagtat 8560575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 9011821 - 9011889
Alignment:
Q  9 accacatacatcattattaaatgaatgatt-taaaaagtgatttttatttatatttaaaaacggagggagta 79  Q
    ||||||||||||||||   ||||||||| | |||||||||| ||||  |||||||| |||||||||||||||    
T  9011821 accacatacatcatta---aatgaatgaatctaaaaagtgaattttgcttatattttaaaacggagggagta 9011889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 18328003 - 18327931
Alignment:
Q  4 tatgaaccacatacatcattattaaatgaatgatt-taaaaagtgatttttatttatatttaaaaacggagggagt 78  Q
    ||||||||| |||||||||||   |||||||||   |||||||| | ||||||||||||| |||||||||||||||    
T  18328003 tatgaaccatatacatcatta---aatgaatgaacctaaaaagtcaattttatttatattaaaaaacggagggagt 18327931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 18437396 - 18437468
Alignment:
Q  4 tatgaaccacatacatcattattaaatgaatgatt-taaaaagtgatttttatttatatttaaaaacggagggagt 78  Q
    ||||||||| |||||||||||   |||||||||   |||||||| | ||||||||||||| |||||||||||||||    
T  18437396 tatgaaccatatacatcatta---aatgaatgaacctaaaaagtcaattttatttatattaaaaaacggagggagt 18437468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 80
Target Start/End: Original strand, 20792078 - 20792119
Alignment:
Q  39 taaaaagtgatttttatttatatttaaaaacggagggagtat 80  Q
    |||||||||||||||| ||||||||  |||||||||||||||    
T  20792078 taaaaagtgatttttacttatattttgaaacggagggagtat 20792119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 80
Target Start/End: Complemental strand, 35003146 - 35003105
Alignment:
Q  39 taaaaagtgatttttatttatatttaaaaacggagggagtat 80  Q
    |||||||| | ||||||||||||||| |||||||||||||||    
T  35003146 taaaaagtcaattttatttatatttagaaacggagggagtat 35003105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 80
Target Start/End: Original strand, 38224021 - 38224082
Alignment:
Q  20 cattattaaatgaatgatt-taaaaagtgatttttatttatatttaaaaacggagggagtat 80  Q
    ||||||||||||||||| | |||||||| | ||||  |||||||||||||||||| ||||||    
T  38224021 cattattaaatgaatgaatctaaaaagtcaattttgcttatatttaaaaacggagagagtat 38224082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 44639815 - 44639891
Alignment:
Q  2 aatatgaaccacatacatcatt-attaaatgaatgatttaaaaagtgatttttatttatatttaaaaacggagggagtat 80  Q
    |||||||||||||||||||||| ||| |||||   || ||||||||||  |||  |||||||||| ||||||||||||||    
T  44639815 aatatgaaccacatacatcattaattgaatga---atctaaaaagtgaaatttgcttatatttaagaacggagggagtat 44639891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 56 - 88
Target Start/End: Complemental strand, 11347138 - 11347106
Alignment:
Q  56 ttatatttaaaaacggagggagtataatttttt 88  Q
    ||||||||||||||||| |||||||||||||||    
T  11347138 ttatatttaaaaacggatggagtataatttttt 11347106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 20787631 - 20787702
Alignment:
Q  8 aaccacatacatcattattaaatgaatgatt-taaaaagtgatttttatttatatttaaaaacggagggagtata 81  Q
    |||||||||||||||||   ||||||||| | |||||||| | ||||| ||||||| ||| ||||||||||||||    
T  20787631 aaccacatacatcatta---aatgaatgaatctaaaaagtcaattttacttatattaaaatacggagggagtata 20787702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 31914397 - 31914472
Alignment:
Q  2 aatatgaaccacatacatcattat-taaatgaatgatttaaaaagtgatttttatttatatttaaaaacggagggagta 79  Q
    |||||| ||||||||||||||||  |||||||||    |||||||| | ||||| ||||||||| ||||||||||||||    
T  31914397 aatatgtaccacatacatcattaaataaatgaatc---taaaaagtcaattttacttatatttagaaacggagggagta 31914472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 2 - 79
Target Start/End: Complemental strand, 34709646 - 34709571
Alignment:
Q  2 aatatgaaccacatacatcattattaaatgaatgatt-taaaaagtgatttttatttatatttaaaaacggagggagta 79  Q
    |||||| ||||||||||||||||   ||||||||| | |||||||| | ||||  ||||||||||| ||||||||||||    
T  34709646 aatatggaccacatacatcatta---aatgaatgaatctaaaaagtaaattttgcttatatttaaatacggagggagta 34709571  T

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Target: chr7 (Bit Score: 34; Significance: 0.0000000008; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 6 - 80
Target Start/End: Original strand, 5212116 - 5212188
Alignment:
Q  6 tgaaccacatacatcattattaaatgaatgatt-taaaaagtgatttttatttatatttaaaaacggagggagtat 80  Q
    |||||||||||||||||||   |||||||||   |||||||||| ||||| |||||||| ||||||||||||||||    
T  5212116 tgaaccacatacatcatta---aatgaatgaacctaaaaagtgaattttacttatattttaaaacggagggagtat 5212188  T

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Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 6 - 76
Target Start/End: Original strand, 26743190 - 26743258
Alignment:
Q  6 tgaaccacatacatcattattaaatgaatgat-ttaaaaagtgatttttatttatatttaaaaacggaggga 76  Q
    |||||||||||||||||||   |||||||||  ||||||||| | ||||| |||||||||||||||||||||    
T  26743190 tgaaccacatacatcatta---aatgaatgaacttaaaaagtcaattttacttatatttaaaaacggaggga 26743258  T

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Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 39 - 79
Target Start/End: Complemental strand, 4188028 - 4187988
Alignment:
Q  39 taaaaagtgatttttatttatatttaaaaacggagggagta 79  Q
    |||||||||| ||||| ||||||||||||||||||||||||    
T  4188028 taaaaagtgaattttacttatatttaaaaacggagggagta 4187988  T

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Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 9140213 - 9140157
Alignment:
Q  24 attaaatgaatgatttaaaaagtgatttttatttatatttaaaaacggagggagtat 80  Q
    |||||||||||||   |||| |||| ||||||||||||||||||||||| |||||||    
T  9140213 attaaatgaatgaaaaaaaatgtgaattttatttatatttaaaaacggatggagtat 9140157  T

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Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 10595560 - 10595635
Alignment:
Q  2 aatatgaaccacatacatcattattaaatgaatga-tttaaaaagtgatttttatttatatttaaaaacggagggagta 79  Q
    ||||||||||||||||||||||    ||||||||| |||||||||| | ||||| ||||||| ||| ||||||||||||    
T  10595560 aatatgaaccacatacatcattt---aatgaatgaatttaaaaagtcaattttacttatattaaaatacggagggagta 10595635  T

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Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 16100232 - 16100307
Alignment:
Q  2 aatatgaaccacatacatcattattaaatgaatga-tttaaaaagtgatttttatttatatttaaaaacggagggagta 79  Q
    |||||||||||||||||||| ||   ||||||||| |||||||||| | ||||  |||||||||||||||| |||||||    
T  16100232 aatatgaaccacatacatcaata---aatgaatgaatttaaaaagtcaattttgcttatatttaaaaacggggggagta 16100307  T

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Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 81
Target Start/End: Complemental strand, 22526316 - 22526242
Alignment:
Q  4 tatgaaccacatacatcattattaaatgaatgatttaaaaagtgatttttatttatatttaaaaacggagggagtata 81  Q
    |||||||||||||||||||||   |||||||||  | |||| | | |||| |||||||||| ||||||||||||||||    
T  22526316 tatgaaccacatacatcatta---aatgaatgaacttaaaaataaattttgtttatatttagaaacggagggagtata 22526242  T

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Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 2 - 81
Target Start/End: Original strand, 39976113 - 39976190
Alignment:
Q  2 aatatgaaccacatacatcattattaaatgaatg-atttaaaaagtgatttttatttatatttaaaaacggagggagtata 81  Q
    |||||||||||||||||||   |||||||||||| || |||||| | | ||||  |||| |||||||||||||||||||||    
T  39976113 aatatgaaccacatacatc---attaaatgaatgaatctaaaaaatcaattttgcttatgtttaaaaacggagggagtata 39976190  T

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Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 81
Target Start/End: Complemental strand, 30005911 - 30005870
Alignment:
Q  40 aaaaagtgatttttatttatatttaaaaacggagggagtata 81  Q
    ||||||| | ||||| ||||||||||||||||||||||||||    
T  30005911 aaaaagtcaattttacttatatttaaaaacggagggagtata 30005870  T

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Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 4 - 81
Target Start/End: Complemental strand, 7208733 - 7208658
Alignment:
Q  4 tatgaaccacatacatcattat-taaatgaatgatttaaaaagtgatttttatttatatttaaaaacggagggagtata 81  Q
    |||||||||||||||||||||  |||||||||    ||||| |||| ||||  |||||||||||| |||||||||||||    
T  7208733 tatgaaccacatacatcattaaataaatgaatc---taaaatgtgagttttgcttatatttaaaatcggagggagtata 7208658  T

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Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 4 - 81
Target Start/End: Complemental strand, 11909333 - 11909258
Alignment:
Q  4 tatgaaccacatacatcattattaaatgaatgat-ttaaaaagtgatttttatttatatttaaaaacggagggagtata 81  Q
    ||||||||||||||||| |||   |||||||||  ||||||||| | ||||  ||||||| ||||||||||||||||||    
T  11909333 tatgaaccacatacatcgtta---aatgaatgaacttaaaaagtcaattttgcttatattaaaaaacggagggagtata 11909258  T

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Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 51 - 79
Target Start/End: Original strand, 36711655 - 36711683
Alignment:
Q  51 tttatttatatttaaaaacggagggagta 79  Q
    |||||||||||||||||||||||||||||    
T  36711655 tttatttatatttaaaaacggagggagta 36711683  T

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Target: scaffold0075 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 79
Target Start/End: Original strand, 17067 - 17143
Alignment:
Q  4 tatgaaccacatacatcattattaaatgaatg-atttaaaaagtgatttttatttatatttaaaaacggagggagta 79  Q
    |||| |||||||||||||| |||||||||||| |  |||||||||| ||||| ||||||||  |||| |||||||||    
T  17067 tatggaccacatacatcatcattaaatgaatgaacctaaaaagtgaattttacttatattttgaaacagagggagta 17143  T

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Target: scaffold0047 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 65989 - 65915
Alignment:
Q  4 tatgaaccacatacatcattattaaatgaatgatt-taaaaagtgatttttatttatatttaaaaacggagggagtat 80  Q
    |||||||||||||||||||||   ||||||||| | |||||||| | ||||  ||||||||||| |||||||||||||    
T  65989 tatgaaccacatacatcatta---aatgaatgaatctaaaaagtaaattttgcttatatttaaatacggagggagtat 65915  T

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Target: scaffold0009 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 8349 - 8268
Alignment:
Q  3 atatgaaccacatacatcattattaaatgaatgatt-taaaaagtgatttttatttatatttaaaaacggagggagtataatttt 86  Q
    ||||||||||||||||| ||||   ||||||||| | |||||||| | ||||  ||||||||||||||||| ||||||| |||||    
T  8349 atatgaaccacatacataatta---aatgaatgaatctaaaaagtcaattttgcttatatttaaaaacggaaggagtattatttt 8268  T

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Target: scaffold0121 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 17498 - 17430
Alignment:
Q  9 accacatacatcattattaaatgaatgat-ttaaaaagtgatttttatttatatttaaaaacggagggagta 79  Q
    ||||||||||||||||   |||||||||  ||||||| | ||||||  ||||||||||||||||||||||||    
T  17498 accacatacatcatta---aatgaatgaacttaaaaaattatttttgcttatatttaaaaacggagggagta 17430  T

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Target: scaffold0002 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 491919 - 491847
Alignment:
Q  4 tatgaaccacatacatcattattaaatgaatg-atttaaaaagtgatttttatttatatttaaaaacggagggagt 78  Q
    |||||||||||||||||   |||||||||||| ||||||||| ||| ||||  ||||||||  |||||||||||||    
T  491919 tatgaaccacatacatc---attaaatgaatgaatttaaaaaatgaattttgcttatattttgaaacggagggagt 491847  T

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