View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7811_high_30 (Length: 346)
Name: NF7811_high_30
Description: NF7811
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7811_high_30 |
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Alignment Details
Target: chr6 (Bit Score: 305; Significance: 1e-172; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 305; E-Value: 1e-172
Query Start/End: Original strand, 18 - 334
Target Start/End: Original strand, 26578506 - 26578822
Alignment:
| Q |
18 |
attaatacagtgagtcataaaggtttgtgagaggaatcttcacaggaattaagtaaagtggacttcaaattttggaacaaagatcaaggaattaataagt |
117 |
Q |
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| T |
26578506 |
attaatacagtgagtcataaaggtttgtgagaggaatcttcacaggaattaagtaaagtggacttcaaaatttggaacaaagatcaaggaattaataagt |
26578605 |
T |
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| Q |
118 |
ataaattacattaggtattaggtaaaatactattaaagtaacttggtaatttcaatatgaattatatacctgaagaagctgctggcttgtcagtgttttt |
217 |
Q |
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| T |
26578606 |
ataaattacattaggtattaggtaaaatactattaaagtaacttggtaatttcaatatgaattatatacctgaagaagctgctggcttgtcagtgttttt |
26578705 |
T |
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| Q |
218 |
aacagttctatacatctgcagaagccaaaagaaggacaattaagattataataataaatgagaaaattttgcagttagtatctacggatatcaatttcag |
317 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
26578706 |
aacagttctatacatctgcagaagccaaaagaaggacaattaagattataataataaatgagaaaattttgcagttagtatctacggctatcaatttcag |
26578805 |
T |
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| Q |
318 |
tcgtccgatcttaaatc |
334 |
Q |
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||||| ||||||||||| |
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| T |
26578806 |
tcgtctgatcttaaatc |
26578822 |
T |
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