View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7811_high_31 (Length: 345)
Name: NF7811_high_31
Description: NF7811
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7811_high_31 |
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Alignment Details
Target: chr7 (Bit Score: 289; Significance: 1e-162; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 1 - 317
Target Start/End: Complemental strand, 33817456 - 33817140
Alignment:
| Q |
1 |
cgagtaaataccactagtattatgaacccaacgatcatcaatcaaggttaacaaaactccaactataaggcacaaaatattcgaaacaaactggtgttct |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33817456 |
cgagtaaataccactagtattatgaacccaacgatcatcaatcaaggttaacaaaactccaactataaggcacaaaatattcgaaacaaactggtgttcc |
33817357 |
T |
|
| Q |
101 |
catacaaatagtggcatcctctaggtaaggttcgaaactcaaacattctgaatctaatggctcagactccccaacaacgagtctttctggtgagatacca |
200 |
Q |
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||||||||||| || ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33817356 |
catacaaatagcggtatcctctaggtaaggttcgaaactcgaacatcctgaatctaatggctcagactccccaacaacgagtctttctggtgagatacca |
33817257 |
T |
|
| Q |
201 |
aataggagatcatcactagcctagaaatcatgtcacaagacgtcgacatgccattaccaataaaagtgggttctcatttagtgtattaaaacttggatcc |
300 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
33817256 |
aataggagaccatcactagcctagaaatcatgtcacaagacgtcgacatgccattaccaataaaagtgggttctcattcagtgtattaaaacttggatcc |
33817157 |
T |
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| Q |
301 |
atctatagtatacatat |
317 |
Q |
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||||||||||||||||| |
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| T |
33817156 |
atctatagtatacatat |
33817140 |
T |
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