View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7811_high_37 (Length: 308)
Name: NF7811_high_37
Description: NF7811
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7811_high_37 |
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Alignment Details
Target: chr3 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 15 - 291
Target Start/End: Complemental strand, 54733335 - 54733059
Alignment:
| Q |
15 |
aactccattttttctctttatcaacttcaatgtttttcctcttactcttatcattatcactctcacacctttgcaacactctttgatccttcgcatcatc |
114 |
Q |
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| T |
54733335 |
aactccattttttctctttatcaacttcaatgtttttcctcttactcttatcattatcactctcacacctttgcaacactctttgatccttcgcatcatc |
54733236 |
T |
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| Q |
115 |
actattcacacccctcaccaactcaatttccgattgacacctcctatatcccttcacttccaaacccatctctgtttttatctcctgtttctcttccaac |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
54733235 |
actattcacacccctcaccaactcaatttccgattgacacctcctatatcccttcacttccaaacccatctctgtttttatctcctgtttctcttccaac |
54733136 |
T |
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| Q |
215 |
ttcattttgttatcatcttcactctttatactctctttttcagagaatttcaccatgcatccatcgtatattctacg |
291 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| |
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| T |
54733135 |
ttcattttgttatcatcttcactctttatactctctttttgagagaatttcaccatgcatccatcgtttattctacg |
54733059 |
T |
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