View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7811_high_5 (Length: 525)

Name: NF7811_high_5
Description: NF7811
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7811_high_5
NF7811_high_5
[»] chr4 (26 HSPs)
chr4 (18-525)||(25677946-25678432)
chr4 (433-525)||(31486312-31486405)
chr4 (438-525)||(10181019-10181106)
chr4 (433-525)||(4264160-4264252)
chr4 (433-525)||(55190857-55190949)
chr4 (438-525)||(5735302-5735389)
chr4 (438-525)||(39193943-39194030)
chr4 (435-525)||(19631336-19631426)
chr4 (468-525)||(5390366-5390423)
chr4 (433-525)||(3901282-3901374)
chr4 (481-525)||(10304859-10304903)
chr4 (433-525)||(21859062-21859154)
chr4 (433-525)||(21914925-21915017)
chr4 (481-525)||(39195633-39195677)
chr4 (433-525)||(46212493-46212585)
chr4 (438-498)||(51736825-51736885)
chr4 (438-525)||(5123300-5123387)
chr4 (438-525)||(28166305-28166392)
chr4 (438-525)||(45198483-45198570)
chr4 (435-525)||(3443530-3443620)
chr4 (439-525)||(37688176-37688262)
chr4 (471-524)||(32423222-32423275)
chr4 (438-515)||(41790375-41790451)
chr4 (433-525)||(5744226-5744318)
chr4 (433-525)||(6494614-6494706)
chr4 (433-525)||(28152017-28152109)
[»] chr7 (19 HSPs)
chr7 (438-518)||(4033322-4033402)
chr7 (433-525)||(28185551-28185643)
chr7 (448-525)||(26203205-26203282)
chr7 (433-525)||(31497847-31497938)
chr7 (438-525)||(36905557-36905644)
chr7 (433-524)||(38198507-38198598)
chr7 (468-525)||(9821150-9821207)
chr7 (468-525)||(10723075-10723132)
chr7 (433-525)||(36819722-36819814)
chr7 (433-525)||(36859351-36859443)
chr7 (433-525)||(42086781-42086873)
chr7 (433-525)||(44479864-44479955)
chr7 (433-525)||(47081006-47081098)
chr7 (433-525)||(47713645-47713737)
chr7 (438-525)||(21392049-21392136)
chr7 (481-519)||(47841220-47841258)
chr7 (433-525)||(19072795-19072887)
chr7 (433-525)||(37951088-37951180)
chr7 (468-519)||(38498681-38498729)
[»] chr1 (14 HSPs)
chr1 (463-525)||(23435707-23435769)
chr1 (438-525)||(31698730-31698818)
chr1 (433-525)||(32988492-32988584)
chr1 (433-525)||(48264954-48265046)
chr1 (433-525)||(25531804-25531896)
chr1 (433-525)||(39354407-39354499)
chr1 (481-524)||(32968254-32968297)
chr1 (462-517)||(43590983-43591037)
chr1 (438-525)||(50539291-50539378)
chr1 (468-525)||(30005675-30005732)
chr1 (468-525)||(38681238-38681295)
chr1 (438-519)||(38737527-38737608)
chr1 (469-525)||(51924838-51924895)
chr1 (433-525)||(48219785-48219877)
[»] chr8 (13 HSPs)
chr8 (433-525)||(38739683-38739775)
chr8 (433-524)||(42785924-42786015)
chr8 (459-519)||(20671565-20671625)
chr8 (438-525)||(148170-148256)
chr8 (433-525)||(10536914-10537005)
chr8 (433-525)||(29790968-29791060)
chr8 (433-525)||(40013677-40013769)
chr8 (433-525)||(45081838-45081930)
chr8 (462-525)||(7603447-7603510)
chr8 (434-525)||(30380557-30380648)
chr8 (433-525)||(13138275-13138367)
chr8 (433-525)||(30289950-30290042)
chr8 (433-497)||(38845226-38845290)
[»] chr3 (19 HSPs)
chr3 (433-525)||(39435178-39435270)
chr3 (468-525)||(50029316-50029373)
chr3 (433-525)||(8559148-8559240)
chr3 (433-525)||(10571287-10571379)
chr3 (433-525)||(45167325-45167417)
chr3 (438-525)||(18659083-18659170)
chr3 (438-525)||(21907027-21907114)
chr3 (462-525)||(35764853-35764915)
chr3 (438-519)||(53066405-53066486)
chr3 (433-525)||(3547564-3547655)
chr3 (433-525)||(7459963-7460055)
chr3 (433-525)||(54840271-54840363)
chr3 (462-517)||(46764026-46764080)
chr3 (468-517)||(9776650-9776699)
chr3 (468-516)||(9794327-9794375)
chr3 (469-525)||(20549040-20549096)
chr3 (433-525)||(38492078-38492169)
chr3 (433-525)||(38833690-38833781)
chr3 (433-525)||(51062416-51062508)
[»] scaffold0459 (1 HSPs)
scaffold0459 (433-525)||(12778-12870)
[»] scaffold0366 (1 HSPs)
scaffold0366 (433-525)||(10419-10511)
[»] chr6 (8 HSPs)
chr6 (433-525)||(22020302-22020394)
chr6 (438-525)||(17417555-17417642)
chr6 (433-525)||(643574-643666)
chr6 (438-514)||(16434682-16434758)
chr6 (433-525)||(24150767-24150859)
chr6 (433-525)||(29986301-29986393)
chr6 (438-525)||(7098016-7098103)
chr6 (481-525)||(12869298-12869342)
[»] chr5 (11 HSPs)
chr5 (433-525)||(38697989-38698081)
chr5 (438-525)||(21961258-21961345)
chr5 (462-524)||(32300625-32300687)
chr5 (433-525)||(5213065-5213157)
chr5 (433-525)||(40512823-40512915)
chr5 (438-525)||(42148338-42148425)
chr5 (433-495)||(23988605-23988667)
chr5 (463-525)||(35641912-35641974)
chr5 (433-525)||(5364446-5364538)
chr5 (433-525)||(29627294-29627386)
chr5 (433-525)||(35290312-35290404)
[»] chr2 (20 HSPs)
chr2 (433-525)||(34826938-34827030)
chr2 (433-525)||(44330410-44330502)
chr2 (438-525)||(3987375-3987462)
chr2 (438-525)||(4045376-4045463)
chr2 (461-514)||(25277792-25277845)
chr2 (433-525)||(23671402-23671494)
chr2 (433-525)||(41172900-41172992)
chr2 (433-525)||(42038549-42038641)
chr2 (438-525)||(36199094-36199181)
chr2 (446-525)||(39418163-39418242)
chr2 (435-525)||(20517447-20517536)
chr2 (463-516)||(19192810-19192863)
chr2 (468-517)||(21271858-21271906)
chr2 (481-525)||(5030424-5030467)
chr2 (433-525)||(7443034-7443126)
chr2 (433-525)||(14372103-14372195)
chr2 (433-525)||(14707677-14707769)
chr2 (433-525)||(18718265-18718357)
chr2 (433-525)||(41463660-41463752)
chr2 (433-525)||(44283422-44283514)
[»] scaffold0687 (1 HSPs)
scaffold0687 (462-525)||(1129-1192)
[»] scaffold0074 (1 HSPs)
scaffold0074 (468-523)||(45272-45327)
[»] scaffold0027 (1 HSPs)
scaffold0027 (438-525)||(117352-117439)
[»] scaffold0051 (1 HSPs)
scaffold0051 (433-525)||(41360-41452)


Alignment Details
Target: chr4 (Bit Score: 378; Significance: 0; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 378; E-Value: 0
Query Start/End: Original strand, 18 - 525
Target Start/End: Original strand, 25677946 - 25678432
Alignment:
Q  18 catttcagctcgagcatgaagttatttatttcttaaccgactaacttccttatccttatatatatctcaaacaaaatccaaagcaaattaaacatccact 117  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25677946 catttcagctcgagcatgaagttatttatttcttaaccgactgacttccttatccttatatatatctcaaacaaaatccaaagcaaattaaacatccact 25678045  T
Q  118 ctactatactatactagtactagtgtttttccttcctaattttgagcttaccgatcattttagtgcttttggtctttttgtagtgatgtgatctggactt 217  Q
    |||||||||||     ||||||                |||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||    
T  25678046 ctactatacta-----gtacta----------------attttgagcttaccgatcattttagtgcttttggtctttttgtagtgatgt---ctggactt 25678121  T
Q  218 gttgatatatggacaaacgagatgtccaaactgagagaaaaagaaaaggaaaagtgtcaaattcactctgctgtctcgaccaacttcactcaacataact 317  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |    
T  25678122 gttgatatatggacaaacgagatgtccaaactgagagaaaaagaaaaggaaaagtgtcaaattcactctgctatctcgaccaacttcactcaacataagt 25678221  T
Q  318 tcat---tatacagcctttgtaattcattgtactctgaatctctgacggacgaacttcggtaccatttgtattcaagtggtctgtgttgggttgttaata 414  Q
    ||||   ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  25678222 tcatccttatacagcctttgtaattcattgtactcttaatctctgacggacgaacttcggtaccatttgtattcaagtggtctgtgttgggttgttaatg 25678321  T
Q  415 tatttgcactctttttagcctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaa 514  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  25678322 tatttgtactctttttagcctaattgactctgacacacatacctatacatatcttttatctttaacatctttaattatctatttaataaaattatgaaaa 25678421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 433 - 525
Target Start/End: Original strand, 31486312 - 31486405
Alignment:
Q  433 cctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctattt-aataaaataatgaaaatttaacatttt 525  Q
    |||| |||||||| ||||||||||| || |||||||||||| ||||| |||||||| ||||||||| || ||||| |||||||||||| |||||    
T  31486312 cctagttgactctaacacacatactaatgcatatcttttatttttaatatctttaaatatctatttgaaaaaaattatgaaaatttaatatttt 31486405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 438 - 525
Target Start/End: Original strand, 10181019 - 10181106
Alignment:
Q  438 ttgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    ||||||||| |||||||||  |||||||| |||||||||||| || || |||||||||||  | ||||| |||||||||||| |||||    
T  10181019 ttgactctgtcacacataccaatacatatgttttatctttaatattttcaattatctattagaaaaaattatgaaaatttaatatttt 10181106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 433 - 525
Target Start/End: Original strand, 4264160 - 4264252
Alignment:
Q  433 cctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||| |||||||||||||||||||  || ||||| |||||||||| | ||||| ||||||||| | || ||||| || ||||||||| |||||    
T  4264160 cctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattatctagtaaaaaaaattataaaaatttaatatttt 4264252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 433 - 525
Target Start/End: Complemental strand, 55190949 - 55190857
Alignment:
Q  433 cctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||| ||||||||||||||| |||  || ||||| |||||||||| | ||||| ||||||||||| || ||||| || ||||||||| |||||    
T  55190949 cctagttgactctgacacacttaccaatgcatatgttttatctttgatatcttcaattatctattaaaaaaaattataaaaatttaatatttt 55190857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 438 - 525
Target Start/End: Original strand, 5735302 - 5735389
Alignment:
Q  438 ttgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||||||||||||||||||  || ||||| |||||||||| | ||||| |||| |||||| || ||||| || ||||||||| |||||    
T  5735302 ttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctattaaaaaaaattataaaaatttaatatttt 5735389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 438 - 525
Target Start/End: Original strand, 39193943 - 39194030
Alignment:
Q  438 ttgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||||||||||||| |||   || |||||||||||||||||| |||||| ||| |||||| || | ||| |||||||||||| |||||    
T  39193943 ttgactctgacacatatatcaatgcatatcttttatctttaatatctttcattctctattaaaaacaattatgaaaatttaatatttt 39194030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 435 - 525
Target Start/End: Original strand, 19631336 - 19631426
Alignment:
Q  435 taattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||||||||| ||||||| |||  || ||||| |||||||||| | ||||| |||| |||||| || ||||| |||||||||||| |||||    
T  19631336 taattgactccgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctattaaaaaaaattatgaaaatttaatatttt 19631426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 468 - 525
Target Start/End: Complemental strand, 5390423 - 5390366
Alignment:
Q  468 ttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||||||||||||||||||||||||||| |  | ||||| |||||||||||| |||||    
T  5390423 ttttatctttaacatctttaattatctaatagaaaaaattatgaaaatttaatatttt 5390366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 525
Target Start/End: Complemental strand, 3901374 - 3901282
Alignment:
Q  433 cctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||| |||||||||||||||||||  || ||||| |||||||||| | ||||| |||| |||| | || ||||| || ||||||||| |||||    
T  3901374 cctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaattataaaaatttaatatttt 3901282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 481 - 525
Target Start/End: Original strand, 10304859 - 10304903
Alignment:
Q  481 atctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||||||||||||||||||| ||||| |||||||||||| |||||    
T  10304859 atctttaattatctatttaaaaaaattatgaaaatttaatatttt 10304903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 525
Target Start/End: Complemental strand, 21859154 - 21859062
Alignment:
Q  433 cctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||| |||||||||||||||||||  |||||||| |||||||||| | || || |||| |||| | || ||||| || ||||||||| |||||    
T  21859154 cctagttgactctgacacacataccaatacatatgttttatctttgatattttcaattctctactaaaaaaaattataaaaatttaatatttt 21859062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 525
Target Start/End: Complemental strand, 21915017 - 21914925
Alignment:
Q  433 cctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||| |||||||||||||||||||  |||||||| |||||||||| | || || |||| |||| | || ||||| || ||||||||| |||||    
T  21915017 cctagttgactctgacacacataccaatacatatgttttatctttgatattttcaattctctactaaaaaaaattataaaaatttaatatttt 21914925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 481 - 525
Target Start/End: Complemental strand, 39195677 - 39195633
Alignment:
Q  481 atctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||||||||||||||||||| ||||| |||||||||||| |||||    
T  39195677 atctttaattatctatttaaaaaaattatgaaaatttaatatttt 39195633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 525
Target Start/End: Complemental strand, 46212585 - 46212493
Alignment:
Q  433 cctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||| |||||||||||||||||||  || ||||| |||||||||| | ||||| |||| |||| | || ||||| || ||||||||| |||||    
T  46212585 cctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaattataaaaatttaatatttt 46212493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 438 - 498
Target Start/End: Original strand, 51736825 - 51736885
Alignment:
Q  438 ttgactctgacacacatacttatacatatcttttatctttaacatctttaattatctattt 498  Q
    |||||||||||||||||| | || ||||| ||| |||||||| || |||||||||||||||    
T  51736825 ttgactctgacacacatattaatgcatatatttgatctttaatatgtttaattatctattt 51736885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 438 - 525
Target Start/End: Complemental strand, 5123387 - 5123300
Alignment:
Q  438 ttgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    ||||||||||||||| |||  || ||||| |||||||||| | ||||| ||||||||| | || ||||| || ||||||||| |||||    
T  5123387 ttgactctgacacacgtaccaatgcatatgttttatctttgatatcttcaattatctactaaaaaaaattataaaaatttaatatttt 5123300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 438 - 525
Target Start/End: Original strand, 28166305 - 28166392
Alignment:
Q  438 ttgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||||||||||||||||||  || ||||| |||||||||| | ||||| |||| |||| | || ||||| || ||||||||| |||||    
T  28166305 ttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaattataaaaatttaatatttt 28166392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 438 - 525
Target Start/End: Complemental strand, 45198570 - 45198483
Alignment:
Q  438 ttgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||||||||||||||||||  || ||||| |||||||||| | ||||| |||| |||| | || ||||| || ||||||||| |||||    
T  45198570 ttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaattataaaaatttaatatttt 45198483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 435 - 525
Target Start/End: Complemental strand, 3443620 - 3443530
Alignment:
Q  435 taattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||||||||||||||||| |||  || ||||| |||||||||| | ||||| |||| |||| | || ||||| || ||||||||| |||||    
T  3443620 taattgactctgacacacgtacaaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaattataaaaatttaatatttt 3443530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 439 - 525
Target Start/End: Complemental strand, 37688262 - 37688176
Alignment:
Q  439 tgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    ||||||||||||||||||  || ||||| |||||||||| | ||||| |||| |||| | || ||||| || ||||||||| |||||    
T  37688262 tgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaattataaaaatttaatatttt 37688176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 471 - 524
Target Start/End: Complemental strand, 32423275 - 32423222
Alignment:
Q  471 tatctttaacatctttaattatctatttaataaaataatgaaaatttaacattt 524  Q
    ||||||| | |||||||||||||||||||| || || |||||||||||| ||||    
T  32423275 tatctttgatatctttaattatctatttaaaaatattatgaaaatttaatattt 32423222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 438 - 515
Target Start/End: Original strand, 41790375 - 41790451
Alignment:
Q  438 ttgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaat 515  Q
    ||||||||  ||||||||  ||| ||||| |||||| ||||| ||||||||||||||| |||| ||||| ||||||||    
T  41790375 ttgactctttcacacataggtatgcatattttttatttttaatatctttaattatcta-ttaaaaaaattatgaaaat 41790451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 525
Target Start/End: Complemental strand, 5744318 - 5744226
Alignment:
Q  433 cctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||| ||||||||||||||||||   ||  |||| |||||||||| | ||||| |||| |||||| || ||||| || ||||||||| |||||    
T  5744318 cctagttgactctgacacacatatcaatgtatatgttttatctttgatatcttcaattctctattaaaaaaaattataaaaatttaatatttt 5744226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 525
Target Start/End: Original strand, 6494614 - 6494706
Alignment:
Q  433 cctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||| ||||||||||||||||||   || ||||| |||||||||||| ||||| |||| |||| | || ||| | || ||||||||| |||||    
T  6494614 cctagttgactctgacacacatatcaatgcatatgttttatctttaatatcttcaattctctactaaaaaaatttataaaaatttaatatttt 6494706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 525
Target Start/End: Original strand, 28152017 - 28152109
Alignment:
Q  433 cctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||| |||||||||||||||||||  || ||||| |||||| ||| | ||||| |||| |||| | || ||||| || ||||||||| |||||    
T  28152017 cctagttgactctgacacacataccaatgcatatgttttatatttgatatcttcaattctctactaaaaaaaattataaaaatttaatatttt 28152109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 2e-16; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 438 - 518
Target Start/End: Original strand, 4033322 - 4033402
Alignment:
Q  438 ttgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaattta 518  Q
    ||||||||||||||||||   || ||||| |||||||||||| || ||||||||||||||||| ||||| |||||||||||    
T  4033322 ttgactctgacacacatatcaatgcatattttttatctttaatatatttaattatctatttaaaaaaattatgaaaattta 4033402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 433 - 525
Target Start/End: Complemental strand, 28185643 - 28185551
Alignment:
Q  433 cctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||| |||||||||||||||||||  |||||||| |||||||||| | |||||||||| |||| | || ||||| || ||||||||| |||||    
T  28185643 cctagttgactctgacacacataccaatacatatgttttatctttgatatctttaattctctactaaaaaaaattataaaaatttaatatttt 28185551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 448 - 525
Target Start/End: Complemental strand, 26203282 - 26203205
Alignment:
Q  448 cacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||||||||| |||||||| |||||| ||||| |||||||||||| ||||  | ||||| |||||||||||| |||||    
T  26203282 cacacatactaatacatattttttatttttaatatctttaattatatattagaaaaaattatgaaaatttaatatttt 26203205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 433 - 525
Target Start/End: Complemental strand, 31497938 - 31497847
Alignment:
Q  433 cctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||| ||||||| |||||||||||| |||||||| |||||||||| | ||||| |||||||||  ||| ||| | |||||||||||| |||||    
T  31497938 cctagttgactccgacacacatactaatacatatgttttatctttgatatcttcaattatcta-ctaaaaaagttatgaaaatttaatatttt 31497847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 438 - 525
Target Start/End: Original strand, 36905557 - 36905644
Alignment:
Q  438 ttgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||||||||||||||||||  |||||||| |||||||||| | ||||| |||| |||| | || ||||| || ||||||||| |||||    
T  36905557 ttgactctgacacacataccaatacatatgttttatctttgatatcttcaattctctactaaaaaaaattataaaaatttaatatttt 36905644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 433 - 524
Target Start/End: Original strand, 38198507 - 38198598
Alignment:
Q  433 cctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacattt 524  Q
    |||| |||||||||| |||||||   || ||||| |||||||||||| || ||||||||| ||||| | ||||| |||||||||||| ||||    
T  38198507 cctagttgactctgatacacatatcaatgcatattttttatctttaatatatttaattatgtatttgaaaaaattatgaaaatttaatattt 38198598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 468 - 525
Target Start/End: Original strand, 9821150 - 9821207
Alignment:
Q  468 ttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    ||||||||| || |||||||||||||||||  | ||||| ||||||||||||||||||    
T  9821150 ttttatcttaaatatctttaattatctattagaaaaaattatgaaaatttaacatttt 9821207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 468 - 525
Target Start/End: Original strand, 10723075 - 10723132
Alignment:
Q  468 ttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    ||||||||| || |||||||||||||||||  | ||||| ||||||||||||||||||    
T  10723075 ttttatcttaaatatctttaattatctattagaaaaaattatgaaaatttaacatttt 10723132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 525
Target Start/End: Original strand, 36819722 - 36819814
Alignment:
Q  433 cctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||| |||||||||||||||||||  || ||||| |||||||||| | ||||| |||| |||| | || ||||| || ||||||||| |||||    
T  36819722 cctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaattataaaaatttaatatttt 36819814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 525
Target Start/End: Complemental strand, 36859443 - 36859351
Alignment:
Q  433 cctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    ||||||||||||| ||||||||||  || ||||| |||||||||| | ||||| |||| |||| | || ||||| || ||||||||| |||||    
T  36859443 cctaattgactctaacacacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaattataaaaatttaatatttt 36859351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 525
Target Start/End: Complemental strand, 42086873 - 42086781
Alignment:
Q  433 cctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||| |||||||||||||||||||  || ||||| |||||||||| | ||||| |||| |||| | || ||||| || ||||||||| |||||    
T  42086873 cctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaattataaaaatttaatatttt 42086781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 525
Target Start/End: Complemental strand, 44479955 - 44479864
Alignment:
Q  433 cctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||| |||||||||||||||||||  || ||||| |||||||||| | ||||| |||| |||| |||| |||| ||| ||||||||| |||||    
T  44479955 cctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctacttaa-aaaaaaataaaaatttaatatttt 44479864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 525
Target Start/End: Original strand, 47081006 - 47081098
Alignment:
Q  433 cctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||| |||||||||||||||||||  || ||||| |||||||||| | ||||| |||| |||| | || ||||| || ||||||||| |||||    
T  47081006 cctagttgactctgacacacataccaatgcatatgttttatctttgatatcttaaattctctactaaaaaaaattataaaaatttaatatttt 47081098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 525
Target Start/End: Complemental strand, 47713737 - 47713645
Alignment:
Q  433 cctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||| |||||||||||||||||||  || ||||| |||||||||| | ||||| |||| |||| | || ||||| || ||||||||| |||||    
T  47713737 cctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattttctactaaaaaaaattataaaaatttaatatttt 47713645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 438 - 525
Target Start/End: Original strand, 21392049 - 21392136
Alignment:
Q  438 ttgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    ||||||||||||||| |||  || ||||| |||||||||| | |||||||||| |||| | || ||||| || ||||||||| |||||    
T  21392049 ttgactctgacacacgtaccaatgcatatgttttatctttgatatctttaattctctactaaaaaaaattataaaaatttaatatttt 21392136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 481 - 519
Target Start/End: Complemental strand, 47841258 - 47841220
Alignment:
Q  481 atctttaattatctatttaataaaataatgaaaatttaa 519  Q
    |||||||||||||||||||| ||||| ||||||||||||    
T  47841258 atctttaattatctatttaaaaaaattatgaaaatttaa 47841220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 525
Target Start/End: Original strand, 19072795 - 19072887
Alignment:
Q  433 cctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||| |||| ||||||||||||||  || ||||| |||||||||| | ||||| |||| |||| | || ||||| || ||||||||| |||||    
T  19072795 cctagttgattctgacacacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaattataaaaatttaatatttt 19072887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 525
Target Start/End: Complemental strand, 37951180 - 37951088
Alignment:
Q  433 cctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||| ||||||||||| |||||||  || ||||| |||||||||| | ||||| |||| |||| | || ||||| || ||||||||| |||||    
T  37951180 cctagttgactctgacgcacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaattataaaaatttaatatttt 37951088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 468 - 519
Target Start/End: Original strand, 38498681 - 38498729
Alignment:
Q  468 ttttatctttaacatctttaattatctatttaataaaataatgaaaatttaa 519  Q
    |||||||||||| |||||||||||||||||  |||||| |||||||||||||    
T  38498681 ttttatctttaatatctttaattatctatt--ataaaa-aatgaaaatttaa 38498729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 463 - 525
Target Start/End: Complemental strand, 23435769 - 23435707
Alignment:
Q  463 atatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||| |||||||||||| |||||||||||||||||||| ||||| |||||||||||| |||||    
T  23435769 atattttttatctttaatatctttaattatctatttaaaaaaattatgaaaatttaatatttt 23435707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 438 - 525
Target Start/End: Complemental strand, 31698818 - 31698730
Alignment:
Q  438 ttgactctgacacacatacttatacatatcttttatctttaacatctttaattatctattt-aataaaataatgaaaatttaacatttt 525  Q
    ||||||||||||||||||   || ||||| ||| |||||||| || ||||||||||||||| || ||||| |||||||||||| |||||    
T  31698818 ttgactctgacacacatatcaatgcatatatttaatctttaatatatttaattatctatttgaaaaaaattatgaaaatttaatatttt 31698730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 433 - 525
Target Start/End: Complemental strand, 32988584 - 32988492
Alignment:
Q  433 cctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||| |||||||||||||||||||  || ||||| |||||||||| | ||||| |||| |||||| || ||||| || ||||||||| |||||    
T  32988584 cctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctattaaaaaaaattataaaaatttaatatttt 32988492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 433 - 525
Target Start/End: Complemental strand, 48265046 - 48264954
Alignment:
Q  433 cctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||| |||||||||||||||||||  || ||||| |||||||||||| ||||| |||| |||| | || ||||| || ||||||||| |||||    
T  48265046 cctagttgactctgacacacataccaatgcatatgttttatctttaatatcttcaattctctactaaaaaaaattataaaaatttaatatttt 48264954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 525
Target Start/End: Original strand, 25531804 - 25531896
Alignment:
Q  433 cctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||| |||||||||||||||||||  || ||||| |||||||||| | ||||| |||| |||| | || ||||| || ||||||||| |||||    
T  25531804 cctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaattataaaaatttaatatttt 25531896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 525
Target Start/End: Complemental strand, 39354499 - 39354407
Alignment:
Q  433 cctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||| |||||||||||||||||||  || ||||| |||||||||| | ||||| |||| |||| | || ||||| || ||||||||| |||||    
T  39354499 cctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaattataaaaatttaatatttt 39354407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 481 - 524
Target Start/End: Complemental strand, 32968297 - 32968254
Alignment:
Q  481 atctttaattatctatttaataaaataatgaaaatttaacattt 524  Q
    |||||||||||||||||||| ||||| |||||||||||| ||||    
T  32968297 atctttaattatctatttaaaaaaattatgaaaatttaatattt 32968254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 462 - 517
Target Start/End: Complemental strand, 43591037 - 43590983
Alignment:
Q  462 catatcttttatctttaacatctttaattatctatttaataaaataatgaaaattt 517  Q
    ||||| |||||||||||| ||||| ||||||||| |||||||||| ||||||||||    
T  43591037 catattttttatctttaatatcttaaattatcta-ttaataaaattatgaaaattt 43590983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 438 - 525
Target Start/End: Original strand, 50539291 - 50539378
Alignment:
Q  438 ttgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||||||||||||||||||  || ||||| |||||||||| | ||||| |||| |||| | || ||||| || ||||||||| |||||    
T  50539291 ttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaattataaaaatttaatatttt 50539378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 525
Target Start/End: Original strand, 30005675 - 30005732
Alignment:
Q  468 ttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||||||||||| |||||| ||||| ||||| | ||||| |||||||||||| |||||    
T  30005675 ttttatctttaatatcttttattatgtatttgaaaaaattatgaaaatttaatatttt 30005732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 525
Target Start/End: Original strand, 38681238 - 38681295
Alignment:
Q  468 ttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    ||||||||| || |||||||||||||||||| | ||||| ||||||| |||| |||||    
T  38681238 ttttatcttgaatatctttaattatctatttgaaaaaattatgaaaaattaatatttt 38681295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 438 - 519
Target Start/End: Complemental strand, 38737608 - 38737527
Alignment:
Q  438 ttgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaa 519  Q
    |||||||||||||| |||   || ||||| |||||| ||||| |||||||||| | |||| || ||||| ||||||||||||    
T  38737608 ttgactctgacacatatatcaatgcatattttttatatttaatatctttaattctttattaaaaaaaattatgaaaatttaa 38737527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 469 - 525
Target Start/End: Original strand, 51924838 - 51924895
Alignment:
Q  469 tttatctttaacatctttaattatctatt-taataaaataatgaaaatttaacatttt 525  Q
    ||||||||||| |||||||||||||||||  || ||||| |||||||||||| |||||    
T  51924838 tttatctttaatatctttaattatctattacaaaaaaattatgaaaatttaatatttt 51924895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 525
Target Start/End: Complemental strand, 48219877 - 48219785
Alignment:
Q  433 cctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||| |||||||||||||||||||  || ||||| |||||||||| | ||||| |||| |||| | || | ||| || ||||||||| |||||    
T  48219877 cctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaataattataaaaatttaatatttt 48219785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 433 - 525
Target Start/End: Original strand, 38739683 - 38739775
Alignment:
Q  433 cctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||| |||||||||||||||||||  || ||||| |||||||||||| ||||| |||| |||||| || ||||| || ||||||||| |||||    
T  38739683 cctagttgactctgacacacataccaatgcatatgttttatctttaatatcttcaattctctattaaaaaaaattataaaaatttaatatttt 38739775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 433 - 524
Target Start/End: Original strand, 42785924 - 42786015
Alignment:
Q  433 cctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacattt 524  Q
    |||| ||||||| |||||| ||||  || |||||  ||||||||||| | |||||||||||||||||| ||||| |||||||||||| ||||    
T  42785924 cctagttgactcagacacatataccaatgcatattatttatctttaataactttaattatctatttaaaaaaattatgaaaatttaatattt 42786015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 459 - 519
Target Start/End: Complemental strand, 20671625 - 20671565
Alignment:
Q  459 atacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaa 519  Q
    |||||||| |||||| ||||| |||||||||||| ||||||| ||||| ||||||||||||    
T  20671625 atacatattttttatatttaatatctttaattatatatttaaaaaaattatgaaaatttaa 20671565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 438 - 525
Target Start/End: Complemental strand, 148256 - 148170
Alignment:
Q  438 ttgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||| |||| ||||||||   |||||||| |||||||||||| || |||||||||||| |||| ||||| |||||||||||| |||||    
T  148256 ttgattctgtcacacatatcaatacatattttttatctttaatatttttaattatcta-ttaaaaaaattatgaaaatttaatatttt 148170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 525
Target Start/End: Complemental strand, 10537005 - 10536914
Alignment:
Q  433 cctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    ||||||||| ||||||||| ||||  || ||||| |||||||||||| ||| |||||||||| ||||| | ||| ||||||| |||| |||||    
T  10537005 cctaattgattctgacacatataccgattcatattttttatctttaatatc-ttaattatctgtttaaaagaattatgaaaaattaatatttt 10536914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 525
Target Start/End: Original strand, 29790968 - 29791060
Alignment:
Q  433 cctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||| |||||||||||||||||||  || ||||| |||||||||| | ||||| |||| |||| | || ||||| || ||||||||| |||||    
T  29790968 cctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaattataaaaatttaatatttt 29791060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 525
Target Start/End: Original strand, 40013677 - 40013769
Alignment:
Q  433 cctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||| |||||||||||||||||||  || ||||| |||||||||| | ||||| |||| |||| | || ||||| || ||||||||| |||||    
T  40013677 cctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaattataaaaatttaatatttt 40013769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 525
Target Start/End: Original strand, 45081838 - 45081930
Alignment:
Q  433 cctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||| |||||||||||||||||||  || ||||| |||||||||| | ||||| |||| |||| | || ||||| || ||||||||| |||||    
T  45081838 cctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaattataaaaatttaatatttt 45081930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 462 - 525
Target Start/End: Complemental strand, 7603510 - 7603447
Alignment:
Q  462 catatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    ||||| |||||||||||| || ||||||||||||||| | ||||  |||||||||||| |||||    
T  7603510 catattttttatctttaaaatttttaattatctatttgaaaaaaatatgaaaatttaatatttt 7603447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 434 - 525
Target Start/End: Original strand, 30380557 - 30380648
Alignment:
Q  434 ctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||||||||||||||||||||||  || ||||| |||||||||| | ||||| |||| |||| | || ||||| |  ||||||||| |||||    
T  30380557 ctaattgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaattaaaaaaatttaatatttt 30380648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 525
Target Start/End: Complemental strand, 13138367 - 13138275
Alignment:
Q  433 cctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||| ||||||||||||||| |||  || ||||| |||||||||| | ||||| |||| |||| | || ||||| || ||||||||| |||||    
T  13138367 cctagttgactctgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaattataaaaatttaatatttt 13138275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 525
Target Start/End: Original strand, 30289950 - 30290042
Alignment:
Q  433 cctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||| |||||||||||| ||||||  || ||||| |||||||||| | ||||| |||| |||| | || ||||| || ||||||||| |||||    
T  30289950 cctagttgactctgacatacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaattataaaaatttaatatttt 30290042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 497
Target Start/End: Original strand, 38845226 - 38845290
Alignment:
Q  433 cctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatt 497  Q
    |||| |||||||||||||||||||  || ||||| |||||||||| | ||||| |||| ||||||    
T  38845226 cctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctatt 38845290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 433 - 525
Target Start/End: Complemental strand, 39435270 - 39435178
Alignment:
Q  433 cctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||| |||| ||||||||| ||||  |||||||| |||||||| ||| || ||||||||||||||| | ||||| |||||||||||| |||||    
T  39435270 cctagttgattctgacacatataccaatacatattttttatctgtaatatttttaattatctattttaaaaaattatgaaaatttaatatttt 39435178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 468 - 525
Target Start/End: Complemental strand, 50029373 - 50029316
Alignment:
Q  468 ttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||||||||||| |||||||||||| ||||||| ||||| |||||||||||| |||||    
T  50029373 ttttatctttaatatctttaattatatatttaaaaaaattatgaaaatttaatatttt 50029316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 433 - 525
Target Start/End: Complemental strand, 8559240 - 8559148
Alignment:
Q  433 cctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||| |||||||||||||||||||  || ||||| |||||||||||| ||||| |||| |||| | || ||||| || ||||||||| |||||    
T  8559240 cctagttgactctgacacacataccaatgcatatgttttatctttaatatcttcaattctctactaaaaaaaattataaaaatttaatatttt 8559148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 433 - 525
Target Start/End: Complemental strand, 10571379 - 10571287
Alignment:
Q  433 cctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||| |||||||||||||||||||  |||||||| |||||||||| | ||||| |||| |||| | || ||||| || ||||||||| |||||    
T  10571379 cctagttgactctgacacacataccaatacatatgttttatctttgatatcttcaattctctactaaaaaaaattataaaaatttaatatttt 10571287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 433 - 525
Target Start/End: Original strand, 45167325 - 45167417
Alignment:
Q  433 cctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||| |||||||||||||||||||  || ||||| |||||||||| | ||||| |||| |||||| || ||||| || ||||||||| |||||    
T  45167325 cctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctattaaaaaaaattataaaaatttaatatttt 45167417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 438 - 525
Target Start/End: Original strand, 18659083 - 18659170
Alignment:
Q  438 ttgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||||||||||||||||||  || ||||| |||||||||| | ||||| |||| |||||| || ||||| || ||||||||| |||||    
T  18659083 ttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctattaaaaaaaattataaaaatttaatatttt 18659170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 438 - 525
Target Start/End: Original strand, 21907027 - 21907114
Alignment:
Q  438 ttgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||||||||||||||||||  || ||||| |||||||||| | ||||| ||||||||| | || ||||| || ||||||||| |||||    
T  21907027 ttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattatctagtaaaaaaaattataaaaatttaatatttt 21907114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 462 - 525
Target Start/End: Complemental strand, 35764915 - 35764853
Alignment:
Q  462 catatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    ||||| |||||||||||| ||||| ||||||||| |||||||||| |||||||||| |||||||    
T  35764915 catattttttatctttaatatcttaaattatcta-ttaataaaattatgaaaattttacatttt 35764853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 438 - 519
Target Start/End: Original strand, 53066405 - 53066486
Alignment:
Q  438 ttgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaa 519  Q
    ||||||||||||||| |||  || ||||| |||||||||| | ||||| ||||||||||| || ||||| || |||||||||    
T  53066405 ttgactctgacacacttaccaatgcatatgttttatctttgatatcttcaattatctattaaaaaaaattataaaaatttaa 53066486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 525
Target Start/End: Complemental strand, 3547655 - 3547564
Alignment:
Q  433 cctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||||||||||| ||||||| |||  || ||||| |||||||||| | ||||| |||||||||  ||| ||||| |||||||||||| |||||    
T  3547655 cctaattgactccgacacacgtaccaatgcatatgttttatctttgatatcttcaattatcta-ctaaaaaaattatgaaaatttaatatttt 3547564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 525
Target Start/End: Complemental strand, 7460055 - 7459963
Alignment:
Q  433 cctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||| |||||||||||||||||||  || ||||| |||||||||| | ||||| |||| |||| | || ||||| || ||||||||| |||||    
T  7460055 cctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaattataaaaatttaatatttt 7459963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 525
Target Start/End: Complemental strand, 54840363 - 54840271
Alignment:
Q  433 cctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||| |||||||||||||||||||  || ||||| |||||||||| | ||||| |||| | |||| || ||||| || ||||||||| |||||    
T  54840363 cctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctttattaaaaaaaattataaaaatttaatatttt 54840271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 462 - 517
Target Start/End: Complemental strand, 46764080 - 46764026
Alignment:
Q  462 catatcttttatctttaacatctttaattatctatttaataaaataatgaaaattt 517  Q
    ||||| |||||||||||| ||||| ||||||||| |||||||||| ||||||||||    
T  46764080 catattttttatctttaatatcttaaattatcta-ttaataaaattatgaaaattt 46764026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 517
Target Start/End: Complemental strand, 9776699 - 9776650
Alignment:
Q  468 ttttatctttaacatctttaattatctatttaataaaataatgaaaattt 517  Q
    |||||||||||| ||||| |||||||||||  | ||||||||||||||||    
T  9776699 ttttatctttaatatcttcaattatctattagaaaaaataatgaaaattt 9776650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 468 - 516
Target Start/End: Complemental strand, 9794375 - 9794327
Alignment:
Q  468 ttttatctttaacatctttaattatctatttaataaaataatgaaaatt 516  Q
    |||||||||||| ||||| |||||||||||  | |||||||||||||||    
T  9794375 ttttatctttaatatcttcaattatctattagaaaaaataatgaaaatt 9794327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 469 - 525
Target Start/End: Complemental strand, 20549096 - 20549040
Alignment:
Q  469 tttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    ||||||||||| || ||||||||||||||| | ||||| || ||||||||| |||||    
T  20549096 tttatctttaatatatttaattatctattttaaaaaattataaaaatttaatatttt 20549040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 525
Target Start/End: Original strand, 38492078 - 38492169
Alignment:
Q  433 cctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||| ||||||||||||||| |||  || ||||| |||||||||||| ||||| |||| ||||  ||| ||||| || ||||||||| |||||    
T  38492078 cctagttgactctgacacacgtaccaatgcatatgttttatctttaatatcttcaattctcta-ctaaaaaaattataaaaatttaatatttt 38492169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 525
Target Start/End: Original strand, 38833690 - 38833781
Alignment:
Q  433 cctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||| |||||||||||||||||||  || ||||| |||||||||| | ||||| |||| |||| | || ||||| || ||||||||| |||||    
T  38833690 cctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaat-ataaaaatttaatatttt 38833781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 525
Target Start/End: Original strand, 51062416 - 51062508
Alignment:
Q  433 cctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||| |||||||||||||||||||  || ||||| |||||||||| | ||||| |||| |||| | || ||||  || ||||||||| |||||    
T  51062416 cctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaaatataaaaatttaatatttt 51062508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 433 - 525
Target Start/End: Original strand, 12778 - 12870
Alignment:
Q  433 cctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||| |||||||||||||||||||| || ||||| |||||||||| | ||||| |||| |||| | || ||||| || ||||||||| |||||    
T  12778 cctagttgactctgacacacatactaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaattataaaaatttaatatttt 12870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 433 - 525
Target Start/End: Original strand, 10419 - 10511
Alignment:
Q  433 cctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||| |||||||||||||||||||| || ||||| |||||||||| | ||||| |||| |||| | || ||||| || ||||||||| |||||    
T  10419 cctagttgactctgacacacatactaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaattataaaaatttaatatttt 10511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.00000000001; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 433 - 525
Target Start/End: Original strand, 22020302 - 22020394
Alignment:
Q  433 cctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||| |||||||||||||||||||  || ||||| |||||||||| | ||||| |||| |||||| || ||||| || ||||||||| |||||    
T  22020302 cctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctattaaaaaaaattatcaaaatttaatatttt 22020394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 438 - 525
Target Start/End: Original strand, 17417555 - 17417642
Alignment:
Q  438 ttgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||||| ||| ||||||||  ||  |||| ||||| |||||| |||||||||||||||||| | ||||| |||||||||||| |||||    
T  17417555 ttgactttgatacacataccgatgtatattttttaactttaatatctttaattatctatttgaaaaaattatgaaaatttaatatttt 17417642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 525
Target Start/End: Complemental strand, 643666 - 643574
Alignment:
Q  433 cctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||| |||||||||||||||||||  || ||||| |||||||||| | ||||| |||| |||| | || ||||| || ||||||||| |||||    
T  643666 cctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaattataaaaatttaatatttt 643574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 438 - 514
Target Start/End: Complemental strand, 16434758 - 16434682
Alignment:
Q  438 ttgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaa 514  Q
    ||||||| ||||| |||||  || ||||| | |||||||||| |||||||||||||||||| | ||||| |||||||    
T  16434758 ttgactcagacactcataccaatgcatatttcttatctttaatatctttaattatctatttgaaaaaattatgaaaa 16434682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 525
Target Start/End: Original strand, 24150767 - 24150859
Alignment:
Q  433 cctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||| |||||||||||||||||||  || ||||| |||||||||| | ||||| |||| |||| | || ||||| || ||||||||| |||||    
T  24150767 cctagttgactctgacacacataccaatgcatatattttatctttgatatcttcaattctctactaaaaaaaattataaaaatttaatatttt 24150859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 525
Target Start/End: Complemental strand, 29986393 - 29986301
Alignment:
Q  433 cctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||| |||||||||||||||||||  || ||||| |||||||||| | ||||| |||| |||| | || ||||| || ||||||||| |||||    
T  29986393 cctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaattataaaaatttaatatttt 29986301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 438 - 525
Target Start/End: Complemental strand, 7098103 - 7098016
Alignment:
Q  438 ttgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||||||||||||||||||  || ||||| |||||||||| | ||||| |||| |||| | || ||||| || ||||||||| |||||    
T  7098103 ttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattttctactaaaaaaaattataaaaatttaatatttt 7098016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 481 - 525
Target Start/End: Original strand, 12869298 - 12869342
Alignment:
Q  481 atctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||||||||||||||||| | ||||| |||||||||||| |||||    
T  12869298 atctttaattatctatttgaaaaaattatgaaaatttaaaatttt 12869342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.00000000001; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 433 - 525
Target Start/End: Original strand, 38697989 - 38698081
Alignment:
Q  433 cctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    ||||||||||||||||||||||||  || ||||| |||||||||| | ||||| |||| |||| | || ||||| || ||||||||| |||||    
T  38697989 cctaattgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaattataaaaatttaatatttt 38698081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 438 - 525
Target Start/End: Original strand, 21961258 - 21961345
Alignment:
Q  438 ttgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    ||||||||| ||||||||   || ||||| |||||||||||| |||||||||||||||||  | ||||| || ||||||||| |||||    
T  21961258 ttgactctgtcacacatatcaattcatatgttttatctttaatatctttaattatctattagaaaaaattattaaaatttaatatttt 21961345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 462 - 524
Target Start/End: Original strand, 32300625 - 32300687
Alignment:
Q  462 catatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacattt 524  Q
    ||||| |||||||||||| |||||||||||||||||  | ||||| |||||||||||| ||||    
T  32300625 catattttttatctttaatatctttaattatctattataaaaaattatgaaaatttaatattt 32300687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 525
Target Start/End: Complemental strand, 5213157 - 5213065
Alignment:
Q  433 cctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||| ||||||||||||||| |||  || ||||| |||||||||||| ||||| |||| |||| | || ||||| || ||||||||| |||||    
T  5213157 cctagttgactctgacacacgtaccaatgcatatgttttatctttaatatcttcaattctctactaaaaaaaattataaaaatttaatatttt 5213065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 525
Target Start/End: Complemental strand, 40512915 - 40512823
Alignment:
Q  433 cctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||| |||||||||||||||||||  || ||||| |||||||||| | ||||| |||| |||| | || ||||| || ||||||||| |||||    
T  40512915 cctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaattataaaaatttaatatttt 40512823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 438 - 525
Target Start/End: Original strand, 42148338 - 42148425
Alignment:
Q  438 ttgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||||||||||||||||||  || ||||| |||||||||| | ||||| |||| |||| | || ||||| || ||||||||| |||||    
T  42148338 ttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaattataaaaatttaatatttt 42148425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 433 - 495
Target Start/End: Original strand, 23988605 - 23988667
Alignment:
Q  433 cctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatcta 495  Q
    |||| |||||||||||||||||||  || ||||| |||||||||| | ||||| |||||||||    
T  23988605 cctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattatcta 23988667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 463 - 525
Target Start/End: Complemental strand, 35641974 - 35641912
Alignment:
Q  463 atatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||| ||||||  |||| |||||||||||||||||| | ||||| |||||||||||| |||||    
T  35641974 atattttttattgttaatatctttaattatctatttgaaaaaattatgaaaatttaatatttt 35641912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 525
Target Start/End: Original strand, 5364446 - 5364538
Alignment:
Q  433 cctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||| |||||||||||||||||||  || ||||| |||||||||| | || || |||| |||| | || ||||| || ||||||||| |||||    
T  5364446 cctagttgactctgacacacataccaatgcatatgttttatctttgatatattcaattctctactaaaaaaaattataaaaatttaatatttt 5364538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 525
Target Start/End: Original strand, 29627294 - 29627386
Alignment:
Q  433 cctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||| ||||||||||||||||||   || ||||| |||||||||| | ||||| |||| |||| | || ||||| || ||||||||| |||||    
T  29627294 cctagttgactctgacacacatatcaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaattataaaaatttaatatttt 29627386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 525
Target Start/End: Original strand, 35290312 - 35290404
Alignment:
Q  433 cctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||| ||||||||||||||| |||  || ||||| |||||||||| | ||||| |||| |||| | || ||||| || ||||||||| |||||    
T  35290312 cctagttgactctgacacacgtaccaatgcatatattttatctttgatatcttcaattctctactaaaaaaaattataaaaatttaatatttt 35290404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.00000000001; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 433 - 525
Target Start/End: Original strand, 34826938 - 34827030
Alignment:
Q  433 cctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||| |||||||||||||||||||| || ||||| |||||||||| | ||||| |||| |||||| || ||||| || |||||| || |||||    
T  34826938 cctagttgactctgacacacatactaatgcatatgttttatctttgatatcttcaattctctattaaaaaaaattataaaaattcaatatttt 34827030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 433 - 525
Target Start/End: Original strand, 44330410 - 44330502
Alignment:
Q  433 cctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||| |||||||||||||||||||  || ||||| |||||||||| | ||||| |||| |||||| || ||||| || ||||||||| |||||    
T  44330410 cctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctattaaaaaaaattatcaaaatttaatatttt 44330502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 438 - 525
Target Start/End: Complemental strand, 3987462 - 3987375
Alignment:
Q  438 ttgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||||||||||||||||||  |||||||| |||||||||| | ||||| |||| |||| | || ||||| || ||||||||| |||||    
T  3987462 ttgactctgacacacataccaatacatatgttttatctttgatatcttcaattctctactaaaaaaaattataaaaatttaatatttt 3987375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 438 - 525
Target Start/End: Complemental strand, 4045463 - 4045376
Alignment:
Q  438 ttgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||||||||||||||||||  || ||||| |||||||||| | ||||| |||| |||||| || ||||| || ||||||||| |||||    
T  4045463 ttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctattaaaaaaaattataaaaatttaatatttt 4045376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 461 - 514
Target Start/End: Original strand, 25277792 - 25277845
Alignment:
Q  461 acatatcttttatctttaacatctttaattatctatttaataaaataatgaaaa 514  Q
    |||||| |||||||||||| |||||||||||| ||||||| ||||| |||||||    
T  25277792 acatattttttatctttaatatctttaattatttatttaaaaaaattatgaaaa 25277845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 525
Target Start/End: Original strand, 23671402 - 23671494
Alignment:
Q  433 cctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||| |||||||||||||||||||  || ||||| |||||||||| | ||||| |||| |||| | || ||||| || ||||||||| |||||    
T  23671402 cctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaattataaaaatttaatatttt 23671494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 525
Target Start/End: Complemental strand, 41172992 - 41172900
Alignment:
Q  433 cctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||| |||||||||||||||||||  || ||||| |||||||||| | ||||| |||| |||| | || ||||| || ||||||||| |||||    
T  41172992 cctacttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattttctactaaaaaaaattataaaaatttaatatttt 41172900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 525
Target Start/End: Original strand, 42038549 - 42038641
Alignment:
Q  433 cctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||| |||||||||||||||||||  || ||||| |||||||||| | ||||| |||| |||| | || ||||| || ||||||||| |||||    
T  42038549 cctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaattataaaaatttaatatttt 42038641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 438 - 525
Target Start/End: Complemental strand, 36199181 - 36199094
Alignment:
Q  438 ttgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||||||||||||||||||| || ||||| |||||||||| | |||||  ||| |||| | || ||||| || ||||||||| |||||    
T  36199181 ttgactctgacacacatactaatgcatatgttttatctttgatatcttcgattctctactaaaaaaaattataaaaatttaatatttt 36199094  T

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Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 525
Target Start/End: Complemental strand, 39418242 - 39418163
Alignment:
Q  446 gacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    ||||||| |||  |||||||| |||||||||| | ||||| ||||||||| | || ||||| |||||||||||| |||||    
T  39418242 gacacacttaccaatacatatattttatctttgatatcttcaattatctactaaaaaaaattatgaaaatttaatatttt 39418163  T

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Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 435 - 525
Target Start/End: Original strand, 20517447 - 20517536
Alignment:
Q  435 taattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    ||||||||||||||||||||||  || ||||| |||||||||| | ||||| |||| ||||  ||| ||||| || ||||||||| |||||    
T  20517447 taattgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctcta-ctaaaaaaattataaaaatttaatatttt 20517536  T

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Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 516
Target Start/End: Complemental strand, 19192863 - 19192810
Alignment:
Q  463 atatcttttatctttaacatctttaattatctatttaataaaataatgaaaatt 516  Q
    |||| |||||||||||| |||||||||||||||||  | ||||| |||||||||    
T  19192863 atattttttatctttaatatctttaattatctattataaaaaattatgaaaatt 19192810  T

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Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 517
Target Start/End: Complemental strand, 21271906 - 21271858
Alignment:
Q  468 ttttatctttaacatctttaattatctatttaataaaataatgaaaattt 517  Q
    |||||||||||| ||||| ||||||||| |||||||||| ||||||||||    
T  21271906 ttttatctttaatatcttaaattatcta-ttaataaaattatgaaaattt 21271858  T

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Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 481 - 525
Target Start/End: Complemental strand, 5030467 - 5030424
Alignment:
Q  481 atctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||||||||||||||||||| ||||| |||||||||||| |||||    
T  5030467 atctttaattatctatttaa-aaaattatgaaaatttaatatttt 5030424  T

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Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 525
Target Start/End: Complemental strand, 7443126 - 7443034
Alignment:
Q  433 cctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||| ||||||||||||||| |||  || ||||| |||||||||| | ||||| |||| |||| | || ||||| || ||||||||| |||||    
T  7443126 cctagttgactctgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaattataaaaatttaatatttt 7443034  T

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Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 525
Target Start/End: Original strand, 14372103 - 14372195
Alignment:
Q  433 cctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||| |||||||||||||||||||  || ||||| |||||||||| | ||||| |||| |||| | || |||||  | ||||||||| |||||    
T  14372103 cctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaattttaaaaatttaatatttt 14372195  T

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Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 525
Target Start/End: Complemental strand, 14707769 - 14707677
Alignment:
Q  433 cctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||| |||||||||||||||||||  || ||||| |||||||||| | ||||| |||| | || | || ||||| || ||||||||| |||||    
T  14707769 cctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctttactaaaaaaaattataaaaatttaatatttt 14707677  T

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Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 525
Target Start/End: Original strand, 18718265 - 18718357
Alignment:
Q  433 cctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||| ||||||||||||||||||   || ||||| |||||||||| | ||||| |||| |||| | || ||||| || ||||||||| |||||    
T  18718265 cctagttgactctgacacacatatcaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaattataaaaatttaatatttt 18718357  T

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Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 525
Target Start/End: Complemental strand, 41463752 - 41463660
Alignment:
Q  433 cctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||| ||||||| ||||||| |||  || ||||| |||||||||| | ||||| |||| |||| | || ||||| |||||||||||| |||||    
T  41463752 cctagttgactccgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaattatgaaaatttaatatttt 41463660  T

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Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 525
Target Start/End: Complemental strand, 44283514 - 44283422
Alignment:
Q  433 cctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||| |||| ||||||||||||||  || ||||| |||||||||| | ||||| |||| |||| | || ||||| || ||||||||| |||||    
T  44283514 cctagttgattctgacacacataccaatgcatatattttatctttgatatcttcaattctctactaaaaaaaattataaaaatttaatatttt 44283422  T

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Target: scaffold0687 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0687
Description:

Target: scaffold0687; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 462 - 525
Target Start/End: Complemental strand, 1192 - 1129
Alignment:
Q  462 catatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    ||||| |||||||||||| || ||||||||||||||| | ||||  |||||||||||| |||||    
T  1192 catattttttatctttaaaatttttaattatctatttgaaaaaaatatgaaaatttaatatttt 1129  T

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Target: scaffold0074 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 468 - 523
Target Start/End: Complemental strand, 45327 - 45272
Alignment:
Q  468 ttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatt 523  Q
    |||||| ||||| |||||||||||||||||  | ||||| ||||||||||||||||    
T  45327 ttttatttttaatatctttaattatctattagaaaaaattatgaaaatttaacatt 45272  T

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Target: scaffold0027 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 438 - 525
Target Start/End: Original strand, 117352 - 117439
Alignment:
Q  438 ttgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    ||||||||||||||||||   || ||||| |||||||||||| ||||| |||||| || | || ||||| || ||||||||| |||||    
T  117352 ttgactctgacacacatatcaatgcatatgttttatctttaatatcttcaattatttactaaaaaaaattataaaaatttaatatttt 117439  T

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Target: scaffold0051 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 525
Target Start/End: Complemental strand, 41452 - 41360
Alignment:
Q  433 cctaattgactctgacacacatacttatacatatcttttatctttaacatctttaattatctatttaataaaataatgaaaatttaacatttt 525  Q
    |||| |||||||||||||||||||  || ||||| |||||||||| | ||||| |||| |||| | || ||||| || || |||||| |||||    
T  41452 cctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaattataaatatttaatatttt 41360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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