View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7811_low_23 (Length: 371)
Name: NF7811_low_23
Description: NF7811
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7811_low_23 |
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Alignment Details
Target: chr2 (Bit Score: 338; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 338; E-Value: 0
Query Start/End: Original strand, 20 - 361
Target Start/End: Complemental strand, 14957065 - 14956724
Alignment:
| Q |
20 |
ctgaataatactcaggttgtgattcacttagcttcaaaagatgatcaatcattgtacctccatcactatgaatatttccacggcgatgttcctcaatgag |
119 |
Q |
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| T |
14957065 |
ctgaataatactcaggttgtgattcacttagcttcaaaagatgatcaatcattgtacctccatcactatgaatatttccacggcgatgttcctcaatgag |
14956966 |
T |
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| Q |
120 |
tccctccaaaaatgcatcagatctttttgcaatcctcttgcaccttttctccaaattatcaagatcaaacaaccttaacaaaggcaaaaaatcaccctta |
219 |
Q |
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| T |
14956965 |
tccctccaaaaatgcattagatctttttgcaatcctcttgcaccttttctccaaattatcaagatcaaacaaccttaacaaaggcaaaaaatcaccctta |
14956866 |
T |
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| Q |
220 |
ttattagcacctaacaaagacatcatctcacttattatctccctaaattgtttagcttcttcaacatctgacacatctccgtcatctccataataccgtt |
319 |
Q |
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| T |
14956865 |
ttattagcacctaacaaagacatcatctcacttattatctccctaaattgtttagcttcttcaacatctgacacatctccgtcatctccataataccgtt |
14956766 |
T |
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| Q |
320 |
ttcccgatatcattctcatcatagcattaaacgtcatctctg |
361 |
Q |
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| T |
14956765 |
ttcccgatatcattctcatcatagcattaaacgtcatctctg |
14956724 |
T |
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