View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7811_low_38 (Length: 320)

Name: NF7811_low_38
Description: NF7811
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7811_low_38
NF7811_low_38
[»] chr4 (38 HSPs)
chr4 (1-310)||(32273387-32273696)
chr4 (76-192)||(3947702-3947818)
chr4 (75-192)||(28964188-28964300)
chr4 (75-209)||(23292926-23293055)
chr4 (125-214)||(12895101-12895190)
chr4 (75-208)||(19482659-19482798)
chr4 (75-208)||(16073386-16073513)
chr4 (73-181)||(715543-715648)
chr4 (73-181)||(752869-752974)
chr4 (150-225)||(11596362-11596438)
chr4 (73-208)||(36635315-36635451)
chr4 (73-208)||(49431016-49431147)
chr4 (75-209)||(12895214-12895343)
chr4 (150-192)||(29205451-29205493)
chr4 (150-195)||(54580033-54580078)
chr4 (117-208)||(40481628-40481718)
chr4 (75-195)||(24613630-24613756)
chr4 (76-192)||(30982808-30982930)
chr4 (150-192)||(21945510-21945552)
chr4 (150-208)||(35157995-35158053)
chr4 (150-191)||(6485621-6485662)
chr4 (98-208)||(27706129-27706245)
chr4 (150-234)||(37203231-37203313)
chr4 (150-194)||(12797348-12797391)
chr4 (152-195)||(4383372-4383414)
chr4 (153-192)||(14465088-14465127)
chr4 (150-208)||(30298937-30298996)
chr4 (150-208)||(30327805-30327864)
chr4 (150-192)||(38847022-38847064)
chr4 (150-192)||(51701265-51701307)
chr4 (155-192)||(8423733-8423770)
chr4 (155-192)||(15029772-15029809)
chr4 (155-191)||(903930-903966)
chr4 (77-109)||(7424742-7424774)
chr4 (155-191)||(22440615-22440651)
chr4 (155-191)||(40179651-40179687)
chr4 (155-211)||(40613438-40613494)
chr4 (152-192)||(47263993-47264033)
[»] chr5 (38 HSPs)
chr5 (74-208)||(31084314-31084448)
chr5 (75-204)||(21576685-21576809)
chr5 (77-192)||(43001807-43001922)
chr5 (75-192)||(39698548-39698671)
chr5 (77-192)||(21190998-21191108)
chr5 (150-208)||(6247613-6247671)
chr5 (74-192)||(42893367-42893480)
chr5 (150-234)||(8419991-8420076)
chr5 (76-208)||(21542021-21542159)
chr5 (150-208)||(14674260-14674318)
chr5 (150-208)||(24906311-24906369)
chr5 (150-208)||(33178016-33178074)
chr5 (75-208)||(21522741-21522880)
chr5 (75-208)||(21533307-21533446)
chr5 (75-191)||(28588614-28588725)
chr5 (87-209)||(15382467-15382592)
chr5 (150-208)||(21351915-21351973)
chr5 (77-191)||(23015926-23016040)
chr5 (150-208)||(4105248-4105308)
chr5 (129-206)||(10298562-10298639)
chr5 (150-191)||(13287409-13287450)
chr5 (150-195)||(15405065-15405110)
chr5 (75-192)||(27932242-27932354)
chr5 (75-192)||(39205887-39206004)
chr5 (155-208)||(41995462-41995515)
chr5 (163-195)||(40131625-40131657)
chr5 (76-138)||(6401565-6401627)
chr5 (150-192)||(7218277-7218319)
chr5 (150-192)||(7677712-7677754)
chr5 (150-204)||(17177033-17177087)
chr5 (150-207)||(30135305-30135363)
chr5 (155-192)||(6471904-6471941)
chr5 (140-192)||(14422911-14422961)
chr5 (155-191)||(5467993-5468029)
chr5 (164-192)||(22611761-22611789)
chr5 (119-191)||(38749542-38749614)
chr5 (163-191)||(40000558-40000586)
chr5 (152-192)||(41633742-41633782)
[»] chr7 (37 HSPs)
chr7 (75-192)||(5409771-5409888)
chr7 (75-189)||(9778510-9778624)
chr7 (73-208)||(24339633-24339774)
chr7 (75-202)||(32093954-32094083)
chr7 (75-208)||(43027404-43027537)
chr7 (140-209)||(25481892-25481961)
chr7 (80-192)||(13770698-13770810)
chr7 (74-192)||(21880159-21880272)
chr7 (150-249)||(24105629-24105727)
chr7 (75-191)||(7438714-7438836)
chr7 (150-192)||(26033471-26033513)
chr7 (150-195)||(3991328-3991373)
chr7 (75-191)||(1433462-1433578)
chr7 (135-195)||(7058430-7058490)
chr7 (150-225)||(9408344-9408420)
chr7 (141-208)||(11665441-11665508)
chr7 (150-208)||(27945032-27945090)
chr7 (164-206)||(35861957-35861999)
chr7 (150-195)||(8234150-8234195)
chr7 (150-195)||(11831436-11831481)
chr7 (154-194)||(13300415-13300455)
chr7 (150-206)||(18215196-18215252)
chr7 (128-191)||(11890907-11890970)
chr7 (153-208)||(29763187-29763242)
chr7 (150-192)||(11061086-11061128)
chr7 (150-191)||(18039006-18039048)
chr7 (75-133)||(29763129-29763187)
chr7 (150-208)||(33994203-33994261)
chr7 (155-192)||(2424621-2424658)
chr7 (150-204)||(11272596-11272652)
chr7 (155-208)||(22868033-22868086)
chr7 (150-207)||(25822647-25822704)
chr7 (155-192)||(29787384-29787421)
chr7 (150-207)||(40287367-40287423)
chr7 (148-192)||(23191903-23191947)
chr7 (156-192)||(32308127-32308163)
chr7 (75-115)||(35862030-35862070)
[»] chr6 (49 HSPs)
chr6 (75-208)||(10770607-10770742)
chr6 (73-209)||(34595124-34595255)
chr6 (77-247)||(12696277-12696446)
chr6 (75-208)||(8776908-8777041)
chr6 (75-208)||(8365448-8365587)
chr6 (76-195)||(31384924-31385048)
chr6 (150-234)||(7801166-7801251)
chr6 (75-208)||(16766688-16766827)
chr6 (76-208)||(17841530-17841657)
chr6 (150-208)||(16833299-16833357)
chr6 (150-206)||(1681751-1681807)
chr6 (150-208)||(853869-853927)
chr6 (72-191)||(5970034-5970159)
chr6 (150-208)||(7977840-7977898)
chr6 (150-249)||(28715241-28715344)
chr6 (75-204)||(17327590-17327719)
chr6 (75-192)||(28152106-28152217)
chr6 (150-206)||(9107380-9107436)
chr6 (150-192)||(9522898-9522940)
chr6 (150-192)||(25010212-25010254)
chr6 (150-192)||(31959166-31959208)
chr6 (78-207)||(32978842-32978967)
chr6 (155-208)||(7265608-7265661)
chr6 (155-195)||(34225824-34225864)
chr6 (125-208)||(3398610-3398692)
chr6 (72-191)||(8713987-8714113)
chr6 (155-190)||(16388248-16388283)
chr6 (150-208)||(17302547-17302606)
chr6 (150-208)||(426524-426582)
chr6 (150-192)||(1191710-1191752)
chr6 (150-208)||(7938107-7938165)
chr6 (150-192)||(17435206-17435248)
chr6 (150-191)||(403874-403915)
chr6 (150-191)||(4118343-4118384)
chr6 (155-192)||(6665220-6665257)
chr6 (155-192)||(7151419-7151456)
chr6 (155-192)||(9025509-9025546)
chr6 (150-195)||(15489742-15489787)
chr6 (150-191)||(17341674-17341715)
chr6 (155-192)||(19040359-19040396)
chr6 (152-208)||(31429015-31429071)
chr6 (164-192)||(2117083-2117111)
chr6 (75-111)||(5732474-5732510)
chr6 (143-191)||(6349740-6349788)
chr6 (75-111)||(10649371-10649407)
chr6 (168-208)||(21424830-21424870)
chr6 (164-208)||(24115871-24115915)
chr6 (155-191)||(31579240-31579276)
chr6 (140-192)||(32511666-32511718)
[»] chr1 (53 HSPs)
chr1 (77-192)||(1486646-1486761)
chr1 (75-226)||(37598804-37598950)
chr1 (76-191)||(40258874-40258984)
chr1 (75-208)||(32461393-32461531)
chr1 (75-192)||(22515827-22515939)
chr1 (156-224)||(9828019-9828087)
chr1 (150-234)||(22881626-22881716)
chr1 (150-208)||(113290-113348)
chr1 (73-192)||(1704933-1705044)
chr1 (75-192)||(51410031-51410144)
chr1 (150-250)||(21378528-21378627)
chr1 (150-195)||(24577196-24577241)
chr1 (75-208)||(18556385-18556524)
chr1 (87-191)||(6612112-6612222)
chr1 (75-190)||(18337338-18337448)
chr1 (150-208)||(48450597-48450655)
chr1 (75-208)||(40917742-40917879)
chr1 (75-208)||(46348323-46348451)
chr1 (155-231)||(43492509-43492585)
chr1 (75-208)||(47989489-47989627)
chr1 (141-192)||(18190109-18190160)
chr1 (77-192)||(42359391-42359501)
chr1 (150-208)||(1815248-1815306)
chr1 (150-192)||(31015050-31015092)
chr1 (150-192)||(31672905-31672947)
chr1 (150-192)||(38078671-38078713)
chr1 (155-192)||(398780-398817)
chr1 (150-195)||(6332675-6332719)
chr1 (150-195)||(28273098-28273143)
chr1 (150-195)||(32434726-32434771)
chr1 (156-207)||(12443476-12443527)
chr1 (77-190)||(16297223-16297333)
chr1 (75-138)||(25934683-25934746)
chr1 (155-249)||(36878417-36878505)
chr1 (202-249)||(48040536-48040583)
chr1 (155-193)||(7918226-7918264)
chr1 (155-208)||(9033022-9033076)
chr1 (150-208)||(19058866-19058924)
chr1 (155-193)||(34298442-34298480)
chr1 (155-192)||(5898281-5898318)
chr1 (155-208)||(6427341-6427394)
chr1 (155-208)||(10572604-10572657)
chr1 (150-207)||(14359532-14359588)
chr1 (155-192)||(16927200-16927237)
chr1 (163-192)||(23738685-23738714)
chr1 (155-192)||(36906004-36906041)
chr1 (155-192)||(40181878-40181915)
chr1 (155-191)||(1864895-1864931)
chr1 (163-191)||(9449031-9449059)
chr1 (155-207)||(10233245-10233297)
chr1 (76-136)||(10577676-10577736)
chr1 (75-111)||(27965940-27965976)
chr1 (76-112)||(48415667-48415703)
[»] chr8 (34 HSPs)
chr8 (150-249)||(25566787-25566890)
chr8 (75-208)||(36450694-36450822)
chr8 (75-208)||(15816058-15816197)
chr8 (74-208)||(31556988-31557116)
chr8 (75-191)||(41831875-41831991)
chr8 (150-223)||(30271301-30271375)
chr8 (150-207)||(30077397-30077454)
chr8 (150-194)||(4948657-4948701)
chr8 (75-208)||(22651967-22652106)
chr8 (76-195)||(29447040-29447165)
chr8 (150-206)||(22197752-22197808)
chr8 (140-208)||(22595985-22596053)
chr8 (75-208)||(29510233-29510372)
chr8 (75-138)||(34450961-34451024)
chr8 (150-192)||(2572066-2572108)
chr8 (150-192)||(8342979-8343021)
chr8 (150-192)||(8343323-8343365)
chr8 (150-208)||(13436974-13437032)
chr8 (75-192)||(18407726-18407838)
chr8 (150-191)||(20873077-20873118)
chr8 (150-190)||(40332200-40332240)
chr8 (75-208)||(4673354-4673493)
chr8 (155-193)||(14134705-14134743)
chr8 (150-195)||(31514876-31514922)
chr8 (155-192)||(3025558-3025595)
chr8 (150-191)||(4298896-4298937)
chr8 (155-192)||(34897092-34897129)
chr8 (155-191)||(11927101-11927137)
chr8 (135-195)||(17468503-17468563)
chr8 (152-208)||(18170494-18170550)
chr8 (152-208)||(18634062-18634118)
chr8 (140-192)||(21465419-21465471)
chr8 (171-207)||(24196628-24196664)
chr8 (150-190)||(44694800-44694840)
[»] chr3 (47 HSPs)
chr3 (77-192)||(28918008-28918120)
chr3 (77-208)||(4987222-4987359)
chr3 (76-208)||(15999951-16000084)
chr3 (75-192)||(27505253-27505370)
chr3 (75-204)||(55401070-55401194)
chr3 (151-219)||(34910297-34910365)
chr3 (90-208)||(10954943-10955056)
chr3 (150-222)||(28812492-28812564)
chr3 (73-208)||(20503456-20503586)
chr3 (129-192)||(25948876-25948939)
chr3 (150-212)||(14209100-14209162)
chr3 (75-192)||(49651716-49651838)
chr3 (75-208)||(41961579-41961718)
chr3 (150-192)||(26508117-26508159)
chr3 (135-192)||(3164020-3164077)
chr3 (150-225)||(25775481-25775558)
chr3 (77-193)||(29508450-29508567)
chr3 (70-192)||(34185047-34185175)
chr3 (125-208)||(21479109-21479193)
chr3 (151-250)||(14747510-14747610)
chr3 (75-138)||(40993275-40993338)
chr3 (150-192)||(1509546-1509588)
chr3 (150-208)||(8587031-8587089)
chr3 (150-208)||(10268496-10268554)
chr3 (150-208)||(11610512-11610570)
chr3 (150-192)||(21256996-21257038)
chr3 (150-192)||(51206363-51206405)
chr3 (75-180)||(7171520-7171620)
chr3 (155-192)||(7928457-7928494)
chr3 (156-205)||(14979175-14979224)
chr3 (152-209)||(15796306-15796363)
chr3 (164-208)||(40052323-40052367)
chr3 (150-209)||(35994748-35994806)
chr3 (75-129)||(5407199-5407253)
chr3 (150-208)||(10335296-10335354)
chr3 (150-208)||(14216883-14216941)
chr3 (150-208)||(14223012-14223070)
chr3 (150-208)||(14829681-14829738)
chr3 (150-192)||(14832106-14832148)
chr3 (150-192)||(26492215-26492257)
chr3 (155-192)||(11251985-11252022)
chr3 (134-191)||(16192744-16192801)
chr3 (165-214)||(24633751-24633800)
chr3 (155-191)||(4201404-4201440)
chr3 (155-207)||(12703999-12704051)
chr3 (155-207)||(14840306-14840358)
chr3 (155-207)||(18426941-18426993)
[»] scaffold0306 (1 HSPs)
scaffold0306 (77-208)||(13391-13523)
[»] scaffold0152 (1 HSPs)
scaffold0152 (77-208)||(21804-21936)
[»] chr2 (35 HSPs)
chr2 (75-192)||(30717459-30717582)
chr2 (75-208)||(38117099-38117227)
chr2 (77-192)||(2438661-2438771)
chr2 (77-206)||(15657857-15657992)
chr2 (150-209)||(19536407-19536467)
chr2 (150-251)||(21374709-21374811)
chr2 (71-207)||(26769503-26769645)
chr2 (126-195)||(974751-974820)
chr2 (75-208)||(18840953-18841081)
chr2 (150-191)||(30404860-30404901)
chr2 (74-138)||(24009351-24009415)
chr2 (152-195)||(12940947-12940990)
chr2 (150-208)||(12668433-12668491)
chr2 (150-208)||(15972864-15972922)
chr2 (150-208)||(18421954-18422012)
chr2 (130-208)||(24894380-24894458)
chr2 (75-190)||(37419752-37419873)
chr2 (150-208)||(37558968-37559026)
chr2 (150-249)||(20539684-20539783)
chr2 (155-192)||(28677916-28677953)
chr2 (152-205)||(30335411-30335464)
chr2 (140-208)||(20473313-20473381)
chr2 (150-208)||(23058452-23058511)
chr2 (134-192)||(4882690-4882748)
chr2 (150-192)||(11223873-11223915)
chr2 (76-138)||(28596525-28596587)
chr2 (150-192)||(33153431-33153473)
chr2 (150-208)||(36756354-36756412)
chr2 (150-192)||(39323271-39323313)
chr2 (155-192)||(21616769-21616806)
chr2 (155-192)||(21782833-21782870)
chr2 (165-193)||(11670761-11670789)
chr2 (164-208)||(18420458-18420502)
chr2 (75-111)||(19536361-19536397)
chr2 (155-191)||(28412358-28412394)
[»] scaffold0361 (1 HSPs)
scaffold0361 (74-207)||(14522-14647)
[»] scaffold0223 (1 HSPs)
scaffold0223 (150-209)||(20162-20221)
[»] scaffold0793 (1 HSPs)
scaffold0793 (73-181)||(4819-4924)
[»] scaffold0103 (1 HSPs)
scaffold0103 (150-208)||(51802-51860)
[»] scaffold0652 (1 HSPs)
scaffold0652 (76-192)||(403-514)
[»] scaffold0018 (1 HSPs)
scaffold0018 (150-208)||(178828-178887)
[»] scaffold0003 (1 HSPs)
scaffold0003 (73-208)||(241585-241726)
[»] scaffold0027 (1 HSPs)
scaffold0027 (152-209)||(46672-46729)
[»] scaffold0011 (1 HSPs)
scaffold0011 (150-195)||(17759-17804)
[»] scaffold0246 (1 HSPs)
scaffold0246 (117-208)||(19567-19657)
[»] scaffold0066 (1 HSPs)
scaffold0066 (152-207)||(33375-33430)
[»] scaffold0053 (1 HSPs)
scaffold0053 (73-208)||(8789-8919)
[»] scaffold0227 (1 HSPs)
scaffold0227 (150-207)||(7321-7378)
[»] scaffold0171 (1 HSPs)
scaffold0171 (125-249)||(23371-23494)
[»] scaffold0136 (1 HSPs)
scaffold0136 (150-191)||(3859-3900)
[»] scaffold0050 (1 HSPs)
scaffold0050 (78-191)||(70286-70394)
[»] scaffold0021 (1 HSPs)
scaffold0021 (150-191)||(130490-130531)
[»] scaffold0122 (1 HSPs)
scaffold0122 (155-207)||(8002-8054)
[»] scaffold0004 (2 HSPs)
scaffold0004 (150-208)||(123616-123677)
scaffold0004 (150-192)||(92814-92856)
[»] scaffold0450 (1 HSPs)
scaffold0450 (73-208)||(8562-8703)
[»] scaffold0380 (1 HSPs)
scaffold0380 (75-133)||(8662-8720)
[»] scaffold0025 (1 HSPs)
scaffold0025 (150-191)||(23777-23819)
[»] scaffold0044 (1 HSPs)
scaffold0044 (150-190)||(53189-53229)


Alignment Details
Target: chr4 (Bit Score: 274; Significance: 1e-153; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 32273387 - 32273696
Alignment:
Q  1 gtagtttcaaatcgtatggagtaatatccgattcatttatcttaagtttaaatacatgaatagacggttatcatctatgaagcatggacactccttggat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  32273387 gtagtttcaaatcgtatggagtaatatccgattcatttatcttaagtttaaatacatgaatagacggttatcatctatgaagcaccgacactccttggat 32273486  T
Q  101 ttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcgacatcaaaacttgtaattactctgaattatgtgattttttcaaattattagttgggttg 200  Q
    ||| ||||||| |||||||||||||||||||||||||||||||||| |||||| |||||| |||||||||||| ||||||||||||||||||||| ||||    
T  32273487 ttgtcgtgtccccgtatcggatacgtgtcgtgtccgactcgacatcgaaacttataattattctgaattatgttattttttcaaattattagttgtgttg 32273586  T
Q  201 gcgtgtcatgtccggtgtctgtgtccatatccgtattcgtgcttcatagtttatcataatttaaactttcattgttcagtcacaactaatgtcacatgat 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32273587 gcgtgtcatgtccggtgtctgtgtccatatccgtattcgtgcttcatagtttatcataatttaaactttcattgttcagtcacaactaatgtcacatgat 32273686  T
Q  301 cattcatctc 310  Q
    ||||||||||    
T  32273687 cattcatctc 32273696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 76 - 192
Target Start/End: Original strand, 3947702 - 3947818
Alignment:
Q  76 tatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcgacatcaaaacttgtaattactctgaattatgtga 175  Q
    ||||||||| |||||||||| ||||| || ||||||| || ||||| |||||||||||||||| |||||   | |||||||||||| |||||||||| ||    
T  3947702 tatgaagcacggacactcctcggattaggtgtgtcctggtgtcggacacgtgtcgtgtccgacacgacactgacacttgtaattacactgaattatgcga 3947801  T
Q  176 ttttttcaaattattag 192  Q
    |||||||||||||||||    
T  3947802 ttttttcaaattattag 3947818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 75 - 192
Target Start/End: Original strand, 28964188 - 28964300
Alignment:
Q  75 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcgacatcaaaacttgtaattactctgaattatgtg 174  Q
    ||||||||||||||||||||| ||||| |||||||||  || ||||||| ||||||||||||||   |||   | |||||||||||| ||||||||||||    
T  28964188 ctatgaagcatggacactcctcggattaggcgtgtcccagtgtcggatatgtgtcgtgtccgac---aca--gacacttgtaattacactgaattatgtg 28964282  T
Q  175 attttttcaaattattag 192  Q
    ||||||||||||||||||    
T  28964283 attttttcaaattattag 28964300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 75 - 209
Target Start/End: Original strand, 23292926 - 23293055
Alignment:
Q  75 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcgacatcaaaacttgtaattactctgaattatgtg 174  Q
    |||||||||| |||||||||| ||||| |||||||||  || ||||| |||||||||||||||| |     | | |||||||||||  ||||||||||||    
T  23292926 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacac-----cgacacttgtaattatactgaattatgtg 23293020  T
Q  175 attttttcaaattattagttgggttggcgtgtcat 209  Q
    |||||||||||||||||| || || ||||||||||    
T  23293021 attttttcaaattattagctgtgtcggcgtgtcat 23293055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 125 - 214
Target Start/End: Original strand, 12895101 - 12895190
Alignment:
Q  125 gtgtcgtgtccgactcgacatcaaaacttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgtcatgtccg 214  Q
    |||||||||||||| ||||| | | ||||||||||||| ||||||||||||||||||||||||||||| ||  | |||||||| ||||||    
T  12895101 gtgtcgtgtccgacacgacaccgacacttgtaattactttgaattatgtgattttttcaaattattagctgtttcggcgtgtcgtgtccg 12895190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 75 - 208
Target Start/End: Complemental strand, 19482798 - 19482659
Alignment:
Q  75 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtcc------gactcgacatcaaaacttgtaattactctgaat 168  Q
    |||||||||| | |||||||| ||||| || ||||||  || ||||| |||||||||||||      ||| ||||| ||| |||||||||||| | ||||    
T  19482798 ctatgaagcacgaacactcctcggattaggtgtgtcccagtgtcggacacgtgtcgtgtccaataccgacacgacaccaacacttgtaattacaccgaat 19482699  T
Q  169 tatgtgattttttcaaattattagttgggttggcgtgtca 208  Q
    |||||||| |||||||||||||||||| || |||||||||    
T  19482698 tatgtgatattttcaaattattagttgtgtcggcgtgtca 19482659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 75 - 208
Target Start/End: Complemental strand, 16073513 - 16073386
Alignment:
Q  75 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcgacatcaaaacttgtaattactctgaattatgtg 174  Q
    ||||||||||||||||||||| ||||| |||||||| | || ||||| | || ||||||||||| |     | | |||||||||||| |||||||||| |    
T  16073513 ctatgaagcatggacactcctcggattaggcgtgtcttagtgtcggacatgtatcgtgtccgacac-----cgacacttgtaattacactgaattatgcg 16073419  T
Q  175 attttttcaaattattagttgggttggcgtgtca 208  Q
    |||||| |||||||||| ||| ||||||||||||    
T  16073418 attttt-caaattattacttgtgttggcgtgtca 16073386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 73 - 181
Target Start/End: Original strand, 715543 - 715648
Alignment:
Q  73 atctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcgacatcaaaacttgtaattactctgaattatg 172  Q
    |||||||||||| |||||||||| ||||| |||||||||  || ||||| | |||||||||   ||  |||| ||| |||||||||||| ||||||||||    
T  715543 atctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgt---acaagacaccaacacttgtaattacactgaattatg 715639  T
Q  173 tgatttttt 181  Q
    |||||||||    
T  715640 tgatttttt 715648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 73 - 181
Target Start/End: Original strand, 752869 - 752974
Alignment:
Q  73 atctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcgacatcaaaacttgtaattactctgaattatg 172  Q
    |||||||||||| |||||||||| ||||| |||||||||  || ||||| | |||||||||   ||  |||| ||| |||||||||||| ||||||||||    
T  752869 atctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgt---acaagacaccaacacttgtaattacactgaattatg 752965  T
Q  173 tgatttttt 181  Q
    |||||||||    
T  752966 tgatttttt 752974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 150 - 225
Target Start/End: Original strand, 11596362 - 11596438
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgtca-tgtccggtgtctgtgtc 225  Q
    |||||||||||| |||||||||||||||||||||||||||||| |  |||||||| ||| |||| |||||| |||||    
T  11596362 acttgtaattacactgaattatgtgattttttcaaattattagctttgttggcgtatcagtgtctggtgtccgtgtc 11596438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 73 - 208
Target Start/End: Complemental strand, 36635451 - 36635315
Alignment:
Q  73 atctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcg-acatcaaaacttgtaattactctgaattat 171  Q
    |||||||||||| |||||||| | ||||| |||||||||  || || ||  ||||||||||| ||| |  |||  || || | ||||||| |||||||||    
T  36635451 atctatgaagcacggacactcttcggattaggcgtgtcccggtgtctgacgcgtgtcgtgtctgacactcacacgaacacatataattacactgaattat 36635352  T
Q  172 gtgattttttcaaattattagttgggttggcgtgtca 208  Q
    |||||||| ||||||||||||| | ||||||||||||    
T  36635351 gtgattttctcaaattattagtggtgttggcgtgtca 36635315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 73 - 208
Target Start/End: Complemental strand, 49431147 - 49431016
Alignment:
Q  73 atctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcgacatcaaaacttgtaattactctgaattatg 172  Q
    |||||| |||||||||||||||| ||||  |||||||||  || | ||| |||||||||||||||| |     | | |||| ||||||| ||||||||||    
T  49431147 atctataaagcatggacactcctcggataaggcgtgtcccggtgttggacacgtgtcgtgtccgacac-----cgacacttttaattacactgaattatg 49431053  T
Q  173 tgatt-ttttcaaattattagttgggttggcgtgtca 208  Q
    ||||| ||||||||||||||| || || |||||||||    
T  49431052 tgatttttttcaaattattagctgtgtcggcgtgtca 49431016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 75 - 209
Target Start/End: Original strand, 12895214 - 12895343
Alignment:
Q  75 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcgacatcaaaacttgtaattactctgaattatgtg 174  Q
    |||||||||| | |||||||| ||||| |||||||||   | |||||||| ||||||||||||| |     | | |||| ||||||| |  |||||||||    
T  12895214 ctatgaagcacgaacactcctcggattaggcgtgtcccgatgtcggatacatgtcgtgtccgacac-----cgacacttataattacacaaaattatgtg 12895308  T
Q  175 attttttcaaattattagttgggttggcgtgtcat 209  Q
    ||||||||||||||||| ||| || ||||||||||    
T  12895309 attttttcaaattattatttgtgtcggcgtgtcat 12895343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 150 - 192
Target Start/End: Complemental strand, 29205493 - 29205451
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattag 192  Q
    |||||||||||| ||||||||||||||||||||||||||||||    
T  29205493 acttgtaattacactgaattatgtgattttttcaaattattag 29205451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 195
Target Start/End: Original strand, 54580033 - 54580078
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattagttg 195  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||    
T  54580033 acttataattacactgaattatgtgattttttcaaattattagttg 54580078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 117 - 208
Target Start/End: Complemental strand, 40481718 - 40481628
Alignment:
Q  117 tcggatacgtgtcgtgtccgactc-gacatcaaaacttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgtca 208  Q
    ||||| ||||||||||||| || | ||||| || |||||||||||| |||||||||||||| ||||||||||||||||||  | |||||||||    
T  40481718 tcggacacgtgtcgtgtccaacaccgacat-aacacttgtaattacactgaattatgtgat-ttttcaaattattagttgtatcggcgtgtca 40481628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 75 - 195
Target Start/End: Original strand, 24613630 - 24613756
Alignment:
Q  75 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactc------gacatcaaaacttgtaattactctgaat 168  Q
    |||||||||| |||||||||| ||||| | |||||||| || || || |||||||||||| ||| |      |||| | | ||||||| ||||  |||||    
T  24613630 ctatgaagcacggacactcctaggattagacgtgtcctggtgtcagacacgtgtcgtgtctgacaccgacatgacaccgacacttgtacttacattgaat 24613729  T
Q  169 tatgtgattttttcaaattattagttg 195  Q
    ||||||||||| |||||||||||||||    
T  24613730 tatgtgattttctcaaattattagttg 24613756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 76 - 192
Target Start/End: Original strand, 30982808 - 30982930
Alignment:
Q  76 tatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgt------ccgactcgacatcaaaacttgtaattactctgaatt 169  Q
    ||||||||| |||||||| ||||||| |||||||||  || ||||| |||||||||||      ||||| ||||| | | |||| ||||||| ||||| |    
T  30982808 tatgaagcacggacactctttggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacacgacaccgacacttataattacactgaaat 30982907  T
Q  170 atgtgattttttcaaattattag 192  Q
    |||||||||| |||||| |||||    
T  30982908 atgtgattttctcaaatcattag 30982930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 192
Target Start/End: Complemental strand, 21945552 - 21945510
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattag 192  Q
    |||||||||||| ||||||||||| ||||||||||||||||||    
T  21945552 acttgtaattacactgaattatgtcattttttcaaattattag 21945510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 208
Target Start/End: Original strand, 35157995 - 35158053
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgtca 208  Q
    |||| ||||||| || ||||||||||||||| |||||||||||||| || |||||||||    
T  35157995 acttataattacactaaattatgtgatttttccaaattattagttgcgtcggcgtgtca 35158053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 150 - 191
Target Start/End: Original strand, 6485621 - 6485662
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattatta 191  Q
    |||||||||||| || ||||||||||||||||||||||||||    
T  6485621 acttgtaattacactaaattatgtgattttttcaaattatta 6485662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 98 - 208
Target Start/End: Original strand, 27706129 - 27706245
Alignment:
Q  98 gatttggcgtgtcctcgtatcggatacgtgtcgtgtccgact------cgacatcaaaacttgtaattactctgaattatgtgattttttcaaattatta 191  Q
    |||| |||||||||  |||||||||||||||||||||||||       |||||   | |||||||||||| || |||||||||||||||| |||||||||    
T  27706129 gattaggcgtgtcccggtatcggatacgtgtcgtgtccgacattaacacgacactcacacttgtaattacactaaattatgtgatttttttaaattatta 27706228  T
Q  192 gttgggttggcgtgtca 208  Q
     ||| || | |||||||    
T  27706229 attgtgtcgacgtgtca 27706245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 150 - 234
Target Start/End: Complemental strand, 37203313 - 37203231
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgtcatgtccggtgtctgtgtccatatccgt 234  Q
    |||||||||||| || |||||||| ||||||||||||||||||  | ||    ||||| ||||||||||| ||||||||||||||    
T  37203313 acttgtaattacactaaattatgtcattttttcaaattattagccgtgt--ctgtgtcgtgtccggtgtccgtgtccatatccgt 37203231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 194
Target Start/End: Original strand, 12797348 - 12797391
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattagtt 194  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||    
T  12797348 acttgtaattacactgaattatgtga-tttttcaaattattagtt 12797391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 152 - 195
Target Start/End: Complemental strand, 4383414 - 4383372
Alignment:
Q  152 ttgtaattactctgaattatgtgattttttcaaattattagttg 195  Q
    |||||||||| |||||||||||||| ||||||||||||||||||    
T  4383414 ttgtaattacactgaattatgtgat-ttttcaaattattagttg 4383372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 153 - 192
Target Start/End: Original strand, 14465088 - 14465127
Alignment:
Q  153 tgtaattactctgaattatgtgattttttcaaattattag 192  Q
    |||||||||  |||||||||||||||||||||||||||||    
T  14465088 tgtaattacattgaattatgtgattttttcaaattattag 14465127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 150 - 208
Target Start/End: Complemental strand, 30298996 - 30298937
Alignment:
Q  150 acttgtaattactctgaattatgtga-ttttttcaaattattagttgggttggcgtgtca 208  Q
    |||||||||||| ||||||||||| | ||||||||||||||||| || || |||||||||    
T  30298996 acttgtaattacactgaattatgtcatttttttcaaattattagctgtgtcggcgtgtca 30298937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 150 - 208
Target Start/End: Complemental strand, 30327864 - 30327805
Alignment:
Q  150 acttgtaattactctgaattatgtga-ttttttcaaattattagttgggttggcgtgtca 208  Q
    |||||||||||| ||||||||||| | ||||||||||||||||| || || |||||||||    
T  30327864 acttgtaattacactgaattatgtcatttttttcaaattattagctgtgtcggcgtgtca 30327805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 192
Target Start/End: Original strand, 38847022 - 38847064
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattag 192  Q
    |||||||||||| |||||| || ||||||||||||||||||||    
T  38847022 acttgtaattacactgaataatatgattttttcaaattattag 38847064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 192
Target Start/End: Complemental strand, 51701307 - 51701265
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattag 192  Q
    |||||||||||| || |||||||| ||||||||||||||||||    
T  51701307 acttgtaattacactcaattatgtaattttttcaaattattag 51701265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 192
Target Start/End: Original strand, 8423733 - 8423770
Alignment:
Q  155 taattactctgaattatgtgattttttcaaattattag 192  Q
    ||||||| ||||||||||||||||| ||||||||||||    
T  8423733 taattacactgaattatgtgattttctcaaattattag 8423770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 192
Target Start/End: Complemental strand, 15029809 - 15029772
Alignment:
Q  155 taattactctgaattatgtgattttttcaaattattag 192  Q
    ||||||| |||||||||||||| |||||||||||||||    
T  15029809 taattacactgaattatgtgatattttcaaattattag 15029772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 191
Target Start/End: Complemental strand, 903966 - 903930
Alignment:
Q  155 taattactctgaattatgtgattttttcaaattatta 191  Q
    ||||||| ||||||||||||||||| |||||||||||    
T  903966 taattacactgaattatgtgattttctcaaattatta 903930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 7424774 - 7424742
Alignment:
Q  77 atgaagcatggacactccttggatttggcgtgt 109  Q
    ||||||||||||||||||||||||| |||||||    
T  7424774 atgaagcatggacactccttggattaggcgtgt 7424742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 191
Target Start/End: Original strand, 22440615 - 22440651
Alignment:
Q  155 taattactctgaattatgtgattttttcaaattatta 191  Q
    ||||||| ||||||||||||||||| |||||||||||    
T  22440615 taattacactgaattatgtgattttctcaaattatta 22440651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 191
Target Start/End: Original strand, 40179651 - 40179687
Alignment:
Q  155 taattactctgaattatgtgattttttcaaattatta 191  Q
    ||||||| ||||||||||||||||||||||| |||||    
T  40179651 taattacactgaattatgtgattttttcaaactatta 40179687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 211
Target Start/End: Complemental strand, 40613494 - 40613438
Alignment:
Q  155 taattactctgaattatgtgattttttcaaattattagttgggttggcgtgtcatgt 211  Q
    ||||||| ||||||||||||||||| ||||| ||||||  | || ||||||||||||    
T  40613494 taattacactgaattatgtgattttctcaaaatattagcggtgtcggcgtgtcatgt 40613438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 192
Target Start/End: Complemental strand, 47264033 - 47263993
Alignment:
Q  152 ttgtaattactctgaattatgtgattttttcaaattattag 192  Q
    |||||||||| | |||||||||||||||| |||||||||||    
T  47264033 ttgtaattacacagaattatgtgatttttacaaattattag 47263993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 9e-30; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 74 - 208
Target Start/End: Complemental strand, 31084448 - 31084314
Alignment:
Q  74 tctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcgacatcaaaacttgtaattactctgaattatgt 173  Q
    |||||||| || |||||||||| ||||| ||| |||||  || ||||| |||||||||||||||| ||||||| | ||||||||||||  ||||||||||    
T  31084448 tctatgaaccacggacactcctcggattaggcatgtcccagtgtcggacacgtgtcgtgtccgacacgacatcgacacttgtaattacattgaattatgt 31084349  T
Q  174 gattttttcaaattattagttgggttggcgtgtca 208  Q
    ||||||||||||||||||| || || |||||||||    
T  31084348 gattttttcaaattattagctgtgtcggcgtgtca 31084314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 75 - 204
Target Start/End: Original strand, 21576685 - 21576809
Alignment:
Q  75 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcgacatcaaaacttgtaattactctgaattatgtg 174  Q
    |||||||||| |||||||||| ||||| |||||||||  || || || ||||||||||||||||     ||| | |||||||||||| ||||||||||||    
T  21576685 ctatgaagcacggacactcctcggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgac-----atcgacacttgtaattacactgaattatgtg 21576779  T
Q  175 attttttcaaattattagttgggttggcgt 204  Q
    |||||||||||||||||| || ||||||||    
T  21576780 attttttcaaattattagctgtgttggcgt 21576809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 77 - 192
Target Start/End: Complemental strand, 43001922 - 43001807
Alignment:
Q  77 atgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcgacatcaaaacttgtaattactctgaattatgtgat 176  Q
    |||||||| |||||||||| ||||| |||||||||  || |  || |||||||||||||||| |  || ||| |||||||||||| ||||||||||| ||    
T  43001922 atgaagcacggacactcctcggattaggcgtgtccaggtgtttgacacgtgtcgtgtccgacacatcaccaacacttgtaattacactgaattatgtaat 43001823  T
Q  177 tttttcaaattattag 192  Q
    ||||||||||||||||    
T  43001822 tttttcaaattattag 43001807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 192
Target Start/End: Complemental strand, 39698671 - 39698548
Alignment:
Q  75 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactc------gacatcaaaacttgtaattactctgaat 168  Q
    |||||||||| |||||||||| ||||| ||||||||   || |||||||| ||||||||||||| |      ||||   | |||||||||||| ||||||    
T  39698671 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcggatacatgtcgtgtccgacaccgacacgacactgacacttgtaattacactgaat 39698572  T
Q  169 tatgtgattttttcaaattattag 192  Q
    ||||||||||||||||||||||||    
T  39698571 tatgtgattttttcaaattattag 39698548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 77 - 192
Target Start/End: Original strand, 21190998 - 21191108
Alignment:
Q  77 atgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcgacatcaaaacttgtaattactctgaattatgtgat 176  Q
    |||||||| |||||||||| ||||| |||||||||  |  ||||| |||||| ||||||||| |     | | |||||||||||| ||||||||||||||    
T  21190998 atgaagcacggacactcctcggattaggcgtgtcccggagtcggacacgtgttgtgtccgacac-----cgacacttgtaattacactgaattatgtgat 21191092  T
Q  177 tttttcaaattattag 192  Q
    ||||||||||||||||    
T  21191093 tttttcaaattattag 21191108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 150 - 208
Target Start/End: Complemental strand, 6247671 - 6247613
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgtca 208  Q
    |||||||||||| |||||||||||||||||||||||||||||| || || |||||||||    
T  6247671 acttgtaattacactgaattatgtgattttttcaaattattagatgtgtcggcgtgtca 6247613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 74 - 192
Target Start/End: Complemental strand, 42893480 - 42893367
Alignment:
Q  74 tctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcgacatcaaaacttgtaattactctgaattatgt 173  Q
    ||||||||||||||||||||||   ||| |||||||||| || ||||| |||||| ||||| ||| |     | | |||||||||||| ||| |||||||    
T  42893480 tctatgaagcatggacactcctcatattaggcgtgtcctggtgtcggacacgtgttgtgtctgacac-----cgacacttgtaattacactggattatgt 42893386  T
Q  174 gattttttcaaattattag 192  Q
    |||||||||||||||||||    
T  42893385 gattttttcaaattattag 42893367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 150 - 234
Target Start/End: Complemental strand, 8420076 - 8419991
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgtca-tgtccggtgtctgtgtccatatccgt 234  Q
    ||||||||||||  |||||||||| |||||||||||||||||| |  || ||||||||| ||||||||||| |||||| |||||||    
T  8420076 acttgtaattacattgaattatgttattttttcaaattattagctatgtcggcgtgtcattgtccggtgtccgtgtccgtatccgt 8419991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 76 - 208
Target Start/End: Complemental strand, 21542159 - 21542021
Alignment:
Q  76 tatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactc------gacatcaaaacttgtaattactctgaatt 169  Q
    ||||| ||| ||||| |||||||||| |||||||||  || ||||| |||||||||||||||| |      |||| | | |||||||||||| |||||||    
T  21542159 tatgatgcacggacattccttggattcggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaatt 21542060  T
Q  170 atgtgattttttcaaattattagttgggttggcgtgtca 208  Q
    |||| || |||| ||||||||||||| || ||| |||||    
T  21542059 atgttatctttttaaattattagttgtgtcggcatgtca 21542021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 150 - 208
Target Start/End: Complemental strand, 14674318 - 14674260
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgtca 208  Q
    |||||||||||| || ||||||||||||||||||||||||||| || || |||||||||    
T  14674318 acttgtaattacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtca 14674260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 150 - 208
Target Start/End: Original strand, 24906311 - 24906369
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgtca 208  Q
    |||||||||||| ||||||||||| |||||||||||||||||  || ||||||||||||    
T  24906311 acttgtaattacactgaattatgtcattttttcaaattattatctgtgttggcgtgtca 24906369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 150 - 208
Target Start/End: Complemental strand, 33178074 - 33178016
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgtca 208  Q
    |||||||||||| || |||||||||||||||| ||||||||||||| || |||||||||    
T  33178074 acttgtaattacactaaattatgtgatttttttaaattattagttgtgtcggcgtgtca 33178016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 75 - 208
Target Start/End: Complemental strand, 21522880 - 21522741
Alignment:
Q  75 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactc------gacatcaaaacttgtaattactctgaat 168  Q
    |||||| ||| |||||||| ||||||| |||||||||  ||  |||| |||||||||||||||| |      |||| | | | |||||||||| ||||||    
T  21522880 ctatgatgcacggacactctttggattaggcgtgtcccggtgccggacacgtgtcgtgtccgacaccgacacgacaccgacaattgtaattacactgaat 21522781  T
Q  169 tatgtgattttttcaaattattagttgggttggcgtgtca 208  Q
    ||||| ||||||| |||||||||| || || |||||||||    
T  21522780 tatgttattttttaaaattattagctgtgtcggcgtgtca 21522741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 75 - 208
Target Start/End: Complemental strand, 21533446 - 21533307
Alignment:
Q  75 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactc------gacatcaaaacttgtaattactctgaat 168  Q
    |||||| ||| |||||||| ||||||| |||||||||  ||  |||| |||||||||||||||| |      |||| | | | |||||||||| ||||||    
T  21533446 ctatgatgcacggacactctttggattaggcgtgtcccggtgccggacacgtgtcgtgtccgacaccgacacgacaccgacaattgtaattacactgaat 21533347  T
Q  169 tatgtgattttttcaaattattagttgggttggcgtgtca 208  Q
    ||||| ||||||| |||||||||| || || |||||||||    
T  21533346 tatgttattttttaaaattattagctgtgtcggcgtgtca 21533307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 75 - 191
Target Start/End: Original strand, 28588614 - 28588725
Alignment:
Q  75 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcgacatcaaaacttgtaattactctgaattatgtg 174  Q
    ||||||||||||||||||| | |||||  ||||||||| || || |||| ||||||||||     ||||| | | || | ||||||| ||||||||||||    
T  28588614 ctatgaagcatggacactcttcggattaagcgtgtcctggtgtcagatatgtgtcgtgtc-----cgacaccgacacctataattacactgaattatgtg 28588708  T
Q  175 attttttcaaattatta 191  Q
    ||||| |||||||||||    
T  28588709 attttctcaaattatta 28588725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 209
Target Start/End: Complemental strand, 15382592 - 15382467
Alignment:
Q  87 gacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactc-gacatcaaaacttgtaattactctgaattatgtgatttttt--ca 183  Q
    ||||||||| ||||| |||||||||  || ||||| | ||||||||||| || | |||| | | |||||||||||  ||||||||| |||||||||  ||    
T  15382592 gacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccaacaccgacaccgacacttgtaattatactgaattatatgattttttttca 15382493  T
Q  184 aattattagttgggttggcgtgtcat 209  Q
    ||||||||| || || ||||||||||    
T  15382492 aattattagctgtgtcggcgtgtcat 15382467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 208
Target Start/End: Original strand, 21351915 - 21351973
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgtca 208  Q
    |||||||||||| ||||||||||||| |||||| |||||||||||| || || ||||||    
T  21351915 acttgtaattacactgaattatgtgactttttccaattattagttgtgtcggtgtgtca 21351973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 77 - 191
Target Start/End: Original strand, 23015926 - 23016040
Alignment:
Q  77 atgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcgacatcaaaacttgtaattactctgaattatgtgat 176  Q
    |||||||  |||||||||| ||||| |||||||||   | ||||| || ||||||||||||  | ||||| | || | ||||||| ||||||||||||||    
T  23015926 atgaagctcggacactcctcggattaggcgtgtcccaatgtcggacacatgtcgtgtccgatacaacatcgacacctataattacactgaattatgtgat 23016025  T
Q  177 tttttcaaattatta 191  Q
    ||| |||||| ||||    
T  23016026 tttctcaaatgatta 23016040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 150 - 208
Target Start/End: Complemental strand, 4105308 - 4105248
Alignment:
Q  150 acttgtaattactctgaattatgtga--ttttttcaaattattagttgggttggcgtgtca 208  Q
    |||||||||||| |||||||||||||  |||||||||||||||||||  || |||||||||    
T  4105308 acttgtaattacactgaattatgtgatcttttttcaaattattagttatgtcggcgtgtca 4105248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 129 - 206
Target Start/End: Complemental strand, 10298639 - 10298562
Alignment:
Q  129 cgtgtccgactcgacatcaaaacttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgt 206  Q
    |||||||||  ||||| | | ||||||||||||  || ||||||||| ||||||||||||||||||| || |||||||    
T  10298639 cgtgtccgatacgacaccgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggcgtgt 10298562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 150 - 191
Target Start/End: Original strand, 13287409 - 13287450
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattatta 191  Q
    ||||||| |||| |||||||||||||||||||||||||||||    
T  13287409 acttgtagttacactgaattatgtgattttttcaaattatta 13287450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 150 - 195
Target Start/End: Original strand, 15405065 - 15405110
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattagttg 195  Q
    ||||||||||||  |||||||| |||||||||||||||||||||||    
T  15405065 acttgtaattacattgaattatatgattttttcaaattattagttg 15405110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 192
Target Start/End: Complemental strand, 27932354 - 27932242
Alignment:
Q  75 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcgacatcaaaacttgtaattactctgaattatgtg 174  Q
    ||||||||||   |||||||| | ||| |||||||||| || || || |||||||||||||||| |     ||| | |||||||||| |||||||||||     
T  27932354 ctatgaagcacaaacactcctcgaattaggcgtgtcctggtgtccgacacgtgtcgtgtccgacac-----caagatttgtaattacactgaattatgta 27932260  T
Q  175 attttttcaaattattag 192  Q
    ||||| ||||||||||||    
T  27932259 attttctcaaattattag 27932242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 192
Target Start/End: Complemental strand, 39206004 - 39205887
Alignment:
Q  75 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcgacatcaaaacttgtaattactctgaattatgtg 174  Q
    ||||||||||| |||||||||||||||   ||| |||  || ||||  |||||||||||| ||| ||||| ||| || | ||||||| |  |||||| ||    
T  39206004 ctatgaagcatagacactccttggattaaacgtatcccggtgtcgggcacgtgtcgtgtcggacacgacaccaacacatataattacacctaattatatg 39205905  T
Q  175 attttttcaaattattag 192  Q
    ||||| ||||||||||||    
T  39205904 attttctcaaattattag 39205887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 41995515 - 41995462
Alignment:
Q  155 taattactctgaattatgtgattttttcaaattattagttgggttggcgtgtca 208  Q
    |||||||  ||||||||||||||||||| |||||||||||| || |||||||||    
T  41995515 taattacattgaattatgtgattttttcgaattattagttgtgtcggcgtgtca 41995462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 195
Target Start/End: Complemental strand, 40131657 - 40131625
Alignment:
Q  163 ctgaattatgtgattttttcaaattattagttg 195  Q
    |||||||||||||||||||||||||||||||||    
T  40131657 ctgaattatgtgattttttcaaattattagttg 40131625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 138
Target Start/End: Complemental strand, 6401627 - 6401565
Alignment:
Q  76 tatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgac 138  Q
    ||||||||| |||||||||||||||  ||||| ||| ||| || || ||||||||||||||||    
T  6401627 tatgaagcacggacactccttggataaggcgtatccccgtgtcagacacgtgtcgtgtccgac 6401565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 192
Target Start/End: Original strand, 7218277 - 7218319
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattag 192  Q
    |||||||||||| |||||||||||||||| || ||||||||||    
T  7218277 acttgtaattacactgaattatgtgatttatttaaattattag 7218319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 192
Target Start/End: Complemental strand, 7677754 - 7677712
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattag 192  Q
    |||| ||||| | ||||||||||||||||||||||||||||||    
T  7677754 acttctaattgcactgaattatgtgattttttcaaattattag 7677712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 204
Target Start/End: Original strand, 17177033 - 17177087
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgt 204  Q
    ||||||||||||  |||||| | |||||||||||||||||||| || ||||||||    
T  17177033 acttgtaattacaatgaattttttgattttttcaaattattagctgtgttggcgt 17177087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 207
Target Start/End: Complemental strand, 30135363 - 30135305
Alignment:
Q  150 acttgtaattactctgaattatgtgatttttt-caaattattagttgggttggcgtgtc 207  Q
    ||||||||||||  ||| |||||||||||||| |||||||||||||| || ||||||||    
T  30135363 acttgtaattacaatgagttatgtgatttttttcaaattattagttgtgtcggcgtgtc 30135305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 192
Target Start/End: Original strand, 6471904 - 6471941
Alignment:
Q  155 taattactctgaattatgtgattttttcaaattattag 192  Q
    ||||||| ||||||||||||||||| ||||||||||||    
T  6471904 taattacactgaattatgtgattttctcaaattattag 6471941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 192
Target Start/End: Complemental strand, 14422961 - 14422911
Alignment:
Q  140 cgacatcaaaacttgtaattactctgaattatgtgattttttcaaattattag 192  Q
    ||||||| |||||| ||||||| ||||||||||||||||||  ||||||||||    
T  14422961 cgacatcgaaacttataattacactgaattatgtgattttt--aaattattag 14422911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 191
Target Start/End: Original strand, 5467993 - 5468029
Alignment:
Q  155 taattactctgaattatgtgattttttcaaattatta 191  Q
    ||||||| ||||||||||||||||| |||||||||||    
T  5467993 taattacactgaattatgtgattttatcaaattatta 5468029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 192
Target Start/End: Original strand, 22611761 - 22611789
Alignment:
Q  164 tgaattatgtgattttttcaaattattag 192  Q
    |||||||||||||||||||||||||||||    
T  22611761 tgaattatgtgattttttcaaattattag 22611789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 191
Target Start/End: Original strand, 38749542 - 38749614
Alignment:
Q  119 ggatacgtgtcgtgtccgactcgacatcaaaacttgtaattactctgaattatgtgattttttcaaattatta 191  Q
    |||||| | ||||||||||| | ||| ||| || | |||||||  |||||||||| |||||||||||||||||    
T  38749542 ggatacatatcgtgtccgacacaacaccaacacatataattacattgaattatgtcattttttcaaattatta 38749614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 163 - 191
Target Start/End: Original strand, 40000558 - 40000586
Alignment:
Q  163 ctgaattatgtgattttttcaaattatta 191  Q
    |||||||||||||||||||||||||||||    
T  40000558 ctgaattatgtgattttttcaaattatta 40000586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 192
Target Start/End: Complemental strand, 41633782 - 41633742
Alignment:
Q  152 ttgtaattactctgaattatgtgattttttcaaattattag 192  Q
    |||||||||| ||||||||||| | ||||||||||||||||    
T  41633782 ttgtaattacactgaattatgtaaatttttcaaattattag 41633742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 66; Significance: 4e-29; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 75 - 192
Target Start/End: Original strand, 5409771 - 5409888
Alignment:
Q  75 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcgacatcaaaacttgtaattactctgaattatgtg 174  Q
    |||||||||| |||||||||| ||||| |||||||||  || ||||| |||||||||||||||| ||||| | | |||||||||| | ||||||||||||    
T  5409771 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacacgacaccgacacttgtaattgcactgaattatgtg 5409870  T
Q  175 attttttcaaattattag 192  Q
    ||||||||||||||||||    
T  5409871 attttttcaaattattag 5409888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 75 - 189
Target Start/End: Complemental strand, 9778624 - 9778510
Alignment:
Q  75 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcgacatcaaaacttgtaattactctgaattatgtg 174  Q
    |||||||||| |||||||||||||||| |||||||||  || ||||| |||||| ||||||||| ||||| | | |||||||||||  ||||||||||||    
T  9778624 ctatgaagcacggacactccttggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacacgacaccgacacttgtaattatactgaattatgtg 9778525  T
Q  175 attttttcaaattat 189  Q
    |||||||||||||||    
T  9778524 attttttcaaattat 9778510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 73 - 208
Target Start/End: Complemental strand, 24339774 - 24339633
Alignment:
Q  73 atctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactc------gacatcaaaacttgtaattactctga 166  Q
    |||||||||||| || ||||||| ||||| |||||||||  || |||||||||||||||||||||| |      |||| | | |||||||||||| ||||    
T  24339774 atctatgaagcacgggcactcctcggattaggcgtgtcccggtgtcggatacgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactga 24339675  T
Q  167 attatgtgattttttcaaattattagttgggttggcgtgtca 208  Q
    |||||||||||||||||||||||||| || || |||||||||    
T  24339674 attatgtgattttttcaaattattagctgtgtcggcgtgtca 24339633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 75 - 202
Target Start/End: Original strand, 32093954 - 32094083
Alignment:
Q  75 ctatgaagcatggacactccttggatttggcgtgtcctcg-tatcggatacgtgtcgtgtccgactcgacatcaaaacttgtaattactctgaattatgt 173  Q
    |||||||||| | |||||||| ||||| ||||||||| || | ||||| |||||||||||||||| ||||| | | | |||||||||| |||||||||||    
T  32093954 ctatgaagcacgaacactcctcggattaggcgtgtccccggtgtcggacacgtgtcgtgtccgacacgacaccgacatttgtaattacactgaattatgt 32094053  T
Q  174 ga-ttttttcaaattattagttgggttggc 202  Q
    || |||||||||||||||||||| ||||||    
T  32094054 gatttttttcaaattattagttgtgttggc 32094083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 75 - 208
Target Start/End: Original strand, 43027404 - 43027537
Alignment:
Q  75 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcgacatcaaaacttgtaattactctgaattatgtg 174  Q
    |||||||||| |||||||| | ||||| |||||||||  || ||||| |||||||||||| ||| ||||| | | ||||||| |||| ||| ||||||||    
T  43027404 ctatgaagcacggacactcatcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacacgacaccgacacttgtatttacactgcattatgtg 43027503  T
Q  175 attttttcaaattattagttgggttggcgtgtca 208  Q
    |||||||||||||||||| ||||| | |||||||    
T  43027504 attttttcaaattattagctgggtcgccgtgtca 43027537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 140 - 209
Target Start/End: Complemental strand, 25481961 - 25481892
Alignment:
Q  140 cgacatcaaaacttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgtcat 209  Q
    ||||| ||| |||||||||||| |||||||||||||||||||||||||||||| || || ||||||||||    
T  25481961 cgacaccaacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcat 25481892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 80 - 192
Target Start/End: Complemental strand, 13770810 - 13770698
Alignment:
Q  80 aagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcgacatcaaaacttgtaattactctgaattatgtgatttt 179  Q
    ||||| |||||||| | ||||| ||||||| |  || ||||| |||||| ||||||||| ||||| | | |||||||||||| ||||||||||| |||||    
T  13770810 aagcacggacactcttcggattaggcgtgttccggtgtcggacacgtgttgtgtccgacacgacaacgacacttgtaattacactgaattatgtaatttt 13770711  T
Q  180 ttcaaattattag 192  Q
    || ||||||||||    
T  13770710 tttaaattattag 13770698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 74 - 192
Target Start/End: Complemental strand, 21880272 - 21880159
Alignment:
Q  74 tctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcgacatcaaaacttgtaattactctgaattatgt 173  Q
    ||||||||||| ||||||| || ||||| |||||||||| || ||||| | ||||||||||     ||||| | | |||||||||||| |||||||||||    
T  21880272 tctatgaagcacggacacttctcggattaggcgtgtcctggtgtcggacatgtgtcgtgtc-----cgacaccgacacttgtaattacactgaattatgt 21880178  T
Q  174 gattttttcaaattattag 192  Q
     ||||| ||||||||||||    
T  21880177 aattttctcaaattattag 21880159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 150 - 249
Target Start/End: Complemental strand, 24105727 - 24105629
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgtca-tgtccggtgtctgtgtccatatccgtattcgtgcttcata 248  Q
    |||||||||||| |||||| |||  |||||||||||||||||| || || ||||||||| ||||| ||||| |||||| ||||||||| |||||||||||    
T  24105727 acttgtaattacactgaatcatgcaattttttcaaattattagctgtgtcggcgtgtcagtgtcc-gtgtc-gtgtccgtatccgtatccgtgcttcata 24105630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 75 - 191
Target Start/End: Complemental strand, 7438836 - 7438714
Alignment:
Q  75 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgt------ccgactcgacatcaaaacttgtaattactctgaat 168  Q
    |||||||||| |||||||||||| ||| |||||||||| || ||| | | |||||||||      |||||  |||| | | ||||||||||||  |||||    
T  7438836 ctatgaagcacggacactccttgaattaggcgtgtcctagtgtcgcacatgtgtcgtgtttgacaccgacatgacaccgacacttgtaattacattgaat 7438737  T
Q  169 tatgtgattttttcaaattatta 191  Q
    |||||||||||||||||||||||    
T  7438736 tatgtgattttttcaaattatta 7438714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 150 - 192
Target Start/End: Original strand, 26033471 - 26033513
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattag 192  Q
    |||||||||||| ||||||||||||||||||||||||||||||    
T  26033471 acttgtaattacactgaattatgtgattttttcaaattattag 26033513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 195
Target Start/End: Complemental strand, 3991373 - 3991328
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattagttg 195  Q
    |||||||||||  |||||||||||||||||||||||||||||||||    
T  3991373 acttgtaattatactgaattatgtgattttttcaaattattagttg 3991328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 75 - 191
Target Start/End: Complemental strand, 1433578 - 1433462
Alignment:
Q  75 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcgacatcaaaacttgtaattactctgaattatgtg 174  Q
    |||||||||| |||||||||| ||||| | |||||||| || ||||| || |||| |||||||| ||||| | | || | ||||||| |  ||| |||||    
T  1433578 ctatgaagcacggacactcctcggattagacgtgtcctggtgtcggacacatgtcttgtccgacacgacaccgacacatataattacaccaaatgatgtg 1433479  T
Q  175 attttttcaaattatta 191  Q
    ||||| |||||||||||    
T  1433478 attttctcaaattatta 1433462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 135 - 195
Target Start/End: Complemental strand, 7058490 - 7058430
Alignment:
Q  135 cgactcgacatcaaaacttgtaattactctgaattatgtgattttttcaaattattagttg 195  Q
    |||| ||||| ||| |||||||||||| ||||||||  |||||||||||||||||||||||    
T  7058490 cgacacgacaccaacacttgtaattacactgaattacatgattttttcaaattattagttg 7058430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 150 - 225
Target Start/End: Original strand, 9408344 - 9408420
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgtca-tgtccggtgtctgtgtc 225  Q
    |||||||||||| || |||||||||||||||||||||||||| ||| || || |||||| |||| |||||| |||||    
T  9408344 acttgtaattacactaaattatgtgattttttcaaattattaattgtgtcggtgtgtcagtgtctggtgtccgtgtc 9408420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 141 - 208
Target Start/End: Original strand, 11665441 - 11665508
Alignment:
Q  141 gacatcaaaacttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgtca 208  Q
    |||||| | |||| ||||||  ||||||||||||||||||||||||||||||||| ||  ||||||||    
T  11665441 gacatcgacacttataattagactgaattatgtgattttttcaaattattagttgtgtcagcgtgtca 11665508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 208
Target Start/End: Complemental strand, 27945090 - 27945032
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgtca 208  Q
    |||||||||||| ||||||||||| ||||| ||||||||||||| | || |||||||||    
T  27945090 acttgtaattacactgaattatgtaattttctcaaattattagtggtgtcggcgtgtca 27945032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 206
Target Start/End: Complemental strand, 35861999 - 35861957
Alignment:
Q  164 tgaattatgtgattttttcaaattattagttgggttggcgtgt 206  Q
    |||||||||||||||||||||||||||||||| || |||||||    
T  35861999 tgaattatgtgattttttcaaattattagttgtgtcggcgtgt 35861957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 150 - 195
Target Start/End: Complemental strand, 8234195 - 8234150
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattagttg 195  Q
    |||||||| ||| ||||||||||| |||||||||||||||||||||    
T  8234195 acttgtaactacactgaattatgttattttttcaaattattagttg 8234150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 150 - 195
Target Start/End: Complemental strand, 11831481 - 11831436
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattagttg 195  Q
    |||||||||||| || |||||| |||||||||||||||||||||||    
T  11831481 acttgtaattacactaaattatatgattttttcaaattattagttg 11831436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 194
Target Start/End: Complemental strand, 13300455 - 13300415
Alignment:
Q  154 gtaattactctgaattatgtgattttttcaaattattagtt 194  Q
    |||||||| ||||||||| ||||||||||||||||||||||    
T  13300455 gtaattacactgaattatatgattttttcaaattattagtt 13300415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 18215196 - 18215252
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgt 206  Q
    |||||||| ||| ||| |||||||||||||||||||||||||| || || |||||||    
T  18215196 acttgtaactacactgcattatgtgattttttcaaattattagctgcgtcggcgtgt 18215252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 128 - 191
Target Start/End: Original strand, 11890907 - 11890970
Alignment:
Q  128 tcgtgtccgactcgacatcaaaacttgtaattactctgaattatgtgattttttcaaattatta 191  Q
    ||||||||||| ||||| | | |||  ||||||| ||||||||| |||||||||||||||||||    
T  11890907 tcgtgtccgacacgacacctacactcataattacactgaattatatgattttttcaaattatta 11890970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 153 - 208
Target Start/End: Original strand, 29763187 - 29763242
Alignment:
Q  153 tgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgtca 208  Q
    ||||| ||| || |||||||||||||||||||||||| ||||| ||||| ||||||    
T  29763187 tgtaactacacttaattatgtgattttttcaaattataagttgtgttggtgtgtca 29763242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 192
Target Start/End: Original strand, 11061086 - 11061128
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattag 192  Q
    |||||||||||  || |||||||||||||||||||||||||||    
T  11061086 acttgtaattatactaaattatgtgattttttcaaattattag 11061128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 191
Target Start/End: Complemental strand, 18039048 - 18039006
Alignment:
Q  150 acttgtaattactctgaattatgtgatt-ttttcaaattatta 191  Q
    |||||||||||| ||||||||||||||| ||||||||||||||    
T  18039048 acttgtaattacactgaattatgtgatttttttcaaattatta 18039006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 29763129 - 29763187
Alignment:
Q  75 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgt 133  Q
    |||||||||| |||||||||| ||||| ||||||||||  | ||||| |||||||||||    
T  29763129 ctatgaagcacggacactcctcggattaggcgtgtcctgatgtcggacacgtgtcgtgt 29763187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 208
Target Start/End: Complemental strand, 33994261 - 33994203
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgtca 208  Q
    |||||||||| | |||||||||||||  ||||||||||| |||||| || |||||||||    
T  33994261 acttgtaattgcactgaattatgtgaccttttcaaattagtagttgcgtcggcgtgtca 33994203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 192
Target Start/End: Complemental strand, 2424658 - 2424621
Alignment:
Q  155 taattactctgaattatgtgattttttcaaattattag 192  Q
    ||||||| ||||||||||||||||| ||||||||||||    
T  2424658 taattacactgaattatgtgattttctcaaattattag 2424621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 204
Target Start/End: Original strand, 11272596 - 11272652
Alignment:
Q  150 acttgtaattactctgaattat--gtgattttttcaaattattagttgggttggcgt 204  Q
    |||||||||||| |||||||||  |||||||||||||||||| ||||| || |||||    
T  11272596 acttgtaattacactgaattatatgtgattttttcaaattatcagttgtgtcggcgt 11272652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 22868086 - 22868033
Alignment:
Q  155 taattactctgaattatgtgattttttcaaattattagttgggttggcgtgtca 208  Q
    ||||||| ||||||||||||||||| ||| ||||||||| | || |||||||||    
T  22868086 taattacactgaattatgtgattttctcatattattagtggtgtcggcgtgtca 22868033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 207
Target Start/End: Complemental strand, 25822704 - 25822647
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgtc 207  Q
    |||||||||||| ||||||| ||   |||||||||||||||||||| || ||||||||    
T  25822704 acttgtaattacactgaattgtgattttttttcaaattattagttgtgtcggcgtgtc 25822647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 192
Target Start/End: Original strand, 29787384 - 29787421
Alignment:
Q  155 taattactctgaattatgtgattttttcaaattattag 192  Q
    ||||||| ||||||||||||||||| ||||||||||||    
T  29787384 taattacactgaattatgtgattttctcaaattattag 29787421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 207
Target Start/End: Original strand, 40287367 - 40287423
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgtc 207  Q
    |||||||||||| |||||| || |||||||||||||||||| |||| || ||||||||    
T  40287367 acttgtaattacactgaat-atatgattttttcaaattattcgttgtgtcggcgtgtc 40287423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 192
Target Start/End: Complemental strand, 23191947 - 23191903
Alignment:
Q  148 aaacttgtaattactctgaattatgtgattttttcaaattattag 192  Q
    |||| ||||||||| ||||| ||||||||||| ||||||||||||    
T  23191947 aaacatgtaattacactgaaatatgtgattttctcaaattattag 23191903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 192
Target Start/End: Complemental strand, 32308163 - 32308127
Alignment:
Q  156 aattactctgaattatgtgattttttcaaattattag 192  Q
    |||||| ||||||||||||||||| ||||||||||||    
T  32308163 aattacactgaattatgtgattttctcaaattattag 32308127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 115
Target Start/End: Complemental strand, 35862070 - 35862030
Alignment:
Q  75 ctatgaagcatggacactccttggatttggcgtgtcctcgt 115  Q
    |||||||||| |||||||||| ||||| |||||||||||||    
T  35862070 ctatgaagcacggacactcctcggattaggcgtgtcctcgt 35862030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 3e-26; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 75 - 208
Target Start/End: Original strand, 10770607 - 10770742
Alignment:
Q  75 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgt--cgtgtccgactcgacatcaaaacttgtaattactctgaattatg 172  Q
    |||||||||| ||||||||||  |||| ||| |||||  | |||||| ||||||  |||||| ||| ||||| | | |||||||||||| ||||||||||    
T  10770607 ctatgaagcacggacactcctcagattaggcatgtcccggcatcggacacgtgtgtcgtgtctgacacgacaccgacacttgtaattacactgaattatg 10770706  T
Q  173 tgattttttcaaattattagttgggttggcgtgtca 208  Q
    ||||||||||||||||||||||| ||||||||||||    
T  10770707 tgattttttcaaattattagttgtgttggcgtgtca 10770742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 73 - 209
Target Start/End: Complemental strand, 34595255 - 34595124
Alignment:
Q  73 atctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcgacatcaaaacttgtaattactctgaattatg 172  Q
    |||||||||||| |||||||||| ||||| || ||||||  || || || |||||||||||||||| |     | | |||||||||||| ||||||||||    
T  34595255 atctatgaagcacggacactcctcggattaggtgtgtcccggtgtcagacacgtgtcgtgtccgacac-----cgacacttgtaattacactgaattatg 34595161  T
Q  173 tgattttttcaaattattagttgggttggcgtgtcat 209  Q
    ||||||||||||||||||||||| || ||||||||||    
T  34595160 tgattttttcaaattattagttgtgtcggcgtgtcat 34595124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 77 - 247
Target Start/End: Complemental strand, 12696446 - 12696277
Alignment:
Q  77 atgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcgacatcaaaacttgtaattactctgaattatgtgat 176  Q
    ||||||||  ||||||||||||||  || ||||||  || || || |||||||||||||||| |||||   | |||||||||||| ||||||||||| ||    
T  12696446 atgaagcacagacactccttggataaggtgtgtcccggtgtcagacacgtgtcgtgtccgacacgacactgacacttgtaattacactgaattatgtaat 12696347  T
Q  177 tttttcaaattattagttgggttggcgtgtca-tgtccggtgtctgtgtccatatccgtattcgtgcttcat 247  Q
    |||||||||||||||| || || ||||||||| ||||| ||||| |||||| | ||||||| ||||||||||    
T  12696346 tttttcaaattattagctgtgtcggcgtgtcagtgtcc-gtgtc-gtgtccgtgtccgtatccgtgcttcat 12696277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 75 - 208
Target Start/End: Original strand, 8776908 - 8777041
Alignment:
Q  75 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcgacatcaaaacttgtaattactctgaattatgtg 174  Q
    |||||||||| |||||||||| ||||| || |||||   || ||||| ||||||||||||     ||||| ||| |||||||||||| ||||||| ||||    
T  8776908 ctatgaagcacggacactcctcggattaggtgtgtctcggtgtcggacacgtgtcgtgtcgtgtccgacaccaacacttgtaattacactgaattttgtg 8777007  T
Q  175 attttttcaaattattagttgggttggcgtgtca 208  Q
    ||||||||||||||||||||| || |||||||||    
T  8777008 attttttcaaattattagttgtgtcggcgtgtca 8777041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 75 - 208
Target Start/End: Original strand, 8365448 - 8365587
Alignment:
Q  75 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccga------ctcgacatcaaaacttgtaattactctgaat 168  Q
    |||||||||| ||| |||||| ||||| |||||||||  || ||||| |||||||||||||||      | ||||| | | |||||||||||| | ||||    
T  8365448 ctatgaagcacggagactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacacgacaccgacacttgtaattacaccgaat 8365547  T
Q  169 tatgtgattttttcaaattattagttgggttggcgtgtca 208  Q
    |||||||| |||||||||||||||||| || |||||||||    
T  8365548 tatgtgatattttcaaattattagttgtgtcggcgtgtca 8365587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 76 - 195
Target Start/End: Complemental strand, 31385048 - 31384924
Alignment:
Q  76 tatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcgacatcaaa-----acttgtaattactctgaatta 170  Q
    ||||||||| |||||||||||||||| |||||||||  || | ||| ||||||||||||| || | |||  | |     |||||||||||| ||||||||    
T  31385048 tatgaagcacggacactccttggattaggcgtgtcccggtgtaggacacgtgtcgtgtccaacactacacgacactgacacttgtaattacactgaatta 31384949  T
Q  171 tgtgattttttcaaattattagttg 195  Q
    |||||||||||||||||||||||||    
T  31384948 tgtgattttttcaaattattagttg 31384924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 150 - 234
Target Start/End: Original strand, 7801166 - 7801251
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgtca-tgtccggtgtctgtgtccatatccgt 234  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| || ||||||| | ||| |||| || |||||| |||||||    
T  7801166 acttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggcgtgttagtgttcggtatccgtgtccgtatccgt 7801251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 208
Target Start/End: Complemental strand, 16766827 - 16766688
Alignment:
Q  75 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactc------gacatcaaaacttgtaattactctgaat 168  Q
    |||||||||| ||||| || | ||||| |||||||||  || ||||| |||||| ||||||||| |      |||| | | |||||||||||| ||||||    
T  16766827 ctatgaagcacggacattcttcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacacgacaccgacacttgtaattacactgaat 16766728  T
Q  169 tatgtgattttttcaaattattagttgggttggcgtgtca 208  Q
    |||||||||||||||||||||||| || || |||||||||    
T  16766727 tatgtgattttttcaaattattagctgtgtcggcgtgtca 16766688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 76 - 208
Target Start/End: Original strand, 17841530 - 17841657
Alignment:
Q  76 tatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcgacatcaaaacttgtaattactctgaattatgtga 175  Q
    ||||||||| |||||||||| ||||| ||||||||   || ||||| || ||||||||||||| |  | |||   ||||||||||| || ||||||||||    
T  17841530 tatgaagcacggacactcctcggattaggcgtgtctcagtgtcggacacatgtcgtgtccgacac--cgtca---cttgtaattacactaaattatgtga 17841624  T
Q  176 ttttttcaaattattagttgggttggcgtgtca 208  Q
    ||||||||||||||||| || || |||||||||    
T  17841625 ttttttcaaattattagctgtgtcggcgtgtca 17841657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 150 - 208
Target Start/End: Complemental strand, 16833357 - 16833299
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgtca 208  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||| || |||||||||    
T  16833357 acttgtaattacactgaagtatgtgattttttcaaattattagttgtgtcggcgtgtca 16833299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 1681807 - 1681751
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgt 206  Q
    |||||||||||| |||||||| |||||||||||||||||||||||| || |||||||    
T  1681807 acttgtaattacactgaattacgtgattttttcaaattattagttgtgtcggcgtgt 1681751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 150 - 208
Target Start/End: Original strand, 853869 - 853927
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgtca 208  Q
    |||||||||| | || |||||||||||||||||||||||||||||| || |||||||||    
T  853869 acttgtaattgcacttaattatgtgattttttcaaattattagttgtgtcggcgtgtca 853927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 72 - 191
Target Start/End: Original strand, 5970034 - 5970159
Alignment:
Q  72 catctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactc------gacatcaaaacttgtaattactctg 165  Q
    |||||||||||||| | ||||||| ||||| |||||||||   | ||||| | |||||||||||||| |      |||| | | | |||||||||| |||    
T  5970034 catctatgaagcatagtcactcctcggattgggcgtgtcccgatgtcggaaatgtgtcgtgtccgacaccgacacgacacccacatttgtaattacactg 5970133  T
Q  166 aattatgtgattttttcaaattatta 191  Q
    ||||||||||||||||||||||||||    
T  5970134 aattatgtgattttttcaaattatta 5970159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 150 - 208
Target Start/End: Original strand, 7977840 - 7977898
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgtca 208  Q
    |||||||||||| ||||||||||| |||||||||||||||||| || || |||||||||    
T  7977840 acttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgtca 7977898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 150 - 249
Target Start/End: Complemental strand, 28715344 - 28715241
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattagttgggttgg----cgtgtcatgtccggtgtctgtgtccatatccgtattcgtgcttc 245  Q
    |||||||||||| ||||||||||| ||||||||||||||||||  | ||  |    ||| || ||||||||||| |||||| ||||||||| ||||||||    
T  28715344 acttgtaattacactgaattatgtcattttttcaaattattagccgtgtcagtgtccgtatcgtgtccggtgtccgtgtccgtatccgtatccgtgcttc 28715245  T
Q  246 atag 249  Q
    ||||    
T  28715244 atag 28715241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 204
Target Start/End: Original strand, 17327590 - 17327719
Alignment:
Q  75 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcgacatcaaaacttgtaattactctgaattatgtg 174  Q
    |||||||||| |||||||||| ||||| |||||||||  || || || |||||||||||||||| |||||   | || | || |||| || |||||||||    
T  17327590 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcagacacgtgtcgtgtccgacacgacactgacacatatagttacactaaattatgtg 17327689  T
Q  175 attttttcaaattattagttgggttggcgt 204  Q
    ||||| ||||| | ||||||| || |||||    
T  17327690 attttctcaaaatcttagttgtgtcggcgt 17327719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 192
Target Start/End: Complemental strand, 28152217 - 28152106
Alignment:
Q  75 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcgacatcaaaacttgtaattactctgaattatgtg 174  Q
    |||||||||| | |||||||| ||||| ||| |||||  || ||||| |||||||||||||||| |     | | |||||||||||| ||||||||||||    
T  28152217 ctatgaagcacgaacactcctcggattaggcctgtcccggtgtcggacacgtgtcgtgtccgacac-----cgacacttgtaattacactgaattatgtg 28152123  T
Q  175 attttttcaaattattag 192  Q
    || |||||||||||||||    
T  28152122 at-ttttcaaattattag 28152106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 9107380 - 9107436
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgt 206  Q
    |||||||||||| ||||||| |||||||||||||||||||||| || || |||||||    
T  9107380 acttgtaattacactgaattttgtgattttttcaaattattagctgtgtcggcgtgt 9107436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 192
Target Start/End: Complemental strand, 9522940 - 9522898
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattag 192  Q
    |||||||||||| ||||||||||||||||||| ||||||||||    
T  9522940 acttgtaattacactgaattatgtgatttttttaaattattag 9522898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 192
Target Start/End: Original strand, 25010212 - 25010254
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattag 192  Q
    ||||||||| || ||||||||||||||||||||||||||||||    
T  25010212 acttgtaataacgctgaattatgtgattttttcaaattattag 25010254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 192
Target Start/End: Complemental strand, 31959208 - 31959166
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattag 192  Q
    |||||||||||| ||| ||||||||||||||||||||||||||    
T  31959208 acttgtaattacactgcattatgtgattttttcaaattattag 31959166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 207
Target Start/End: Original strand, 32978842 - 32978967
Alignment:
Q  78 tgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcgacatcaaaacttgtaattactctgaattatgtg-at 176  Q
    ||||||| |||||||||||||||| | |||||||  || ||||| | ||||||||||     ||||| | | |||||||||||| || |||||||||  |    
T  32978842 tgaagcacggacactccttggattagacgtgtcccggtgtcggacatgtgtcgtgtc-----cgacaccgacacttgtaattacacttaattatgtgttt 32978936  T
Q  177 tttttcaaattattagttgggttggcgtgtc 207  Q
    |||||||||||||||| || || ||||||||    
T  32978937 tttttcaaattattagctgtgtcggcgtgtc 32978967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 7265608 - 7265661
Alignment:
Q  155 taattactctgaattatgtgattttttcaaattattagttgggttggcgtgtca 208  Q
    ||||||| ||||||||||||||||| ||||||||||||  | ||||||||||||    
T  7265608 taattacactgaattatgtgattttctcaaattattagcggtgttggcgtgtca 7265661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 195
Target Start/End: Original strand, 34225824 - 34225864
Alignment:
Q  155 taattactctgaattatgtgattttttcaaattattagttg 195  Q
    ||||||| |||||||||| ||||||||||||||||||||||    
T  34225824 taattacactgaattatgcgattttttcaaattattagttg 34225864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 125 - 208
Target Start/End: Complemental strand, 3398692 - 3398610
Alignment:
Q  125 gtgtcgtgtccgactcgacatcaaaacttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgtca 208  Q
    ||||||||||| || ||||| | | |||| ||||||| ||||||||| ||| |||||||||||||||| || || |||||||||    
T  3398692 gtgtcgtgtccaacacgacaccgatacttataattacactgaattatatga-tttttcaaattattagctgtgtcggcgtgtca 3398610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 72 - 191
Target Start/End: Complemental strand, 8714113 - 8713987
Alignment:
Q  72 catctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactc------gacatcaaaacttgtaattactctg 165  Q
    |||||||||||||  ||||||||| ||||| |||||||||   | ||||| | |||||||||||||| |      |||| | | | |||||||||| |||    
T  8714113 catctatgaagcaaagacactcctcggattgggcgtgtcccgatgtcggaaatgtgtcgtgtccgacaccgacacgacacccacatttgtaattacactg 8714014  T
Q  166 aattatgtgatt-ttttcaaattatta 191  Q
    |||||||||||| ||||||||||||||    
T  8714013 aattatgtgatttttttcaaattatta 8713987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 155 - 190
Target Start/End: Original strand, 16388248 - 16388283
Alignment:
Q  155 taattactctgaattatgtgattttttcaaattatt 190  Q
    ||||||| ||||||||||||||||||||||||||||    
T  16388248 taattacactgaattatgtgattttttcaaattatt 16388283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 150 - 208
Target Start/End: Complemental strand, 17302606 - 17302547
Alignment:
Q  150 acttgtaattactctgaattatgtgatt-ttttcaaattattagttgggttggcgtgtca 208  Q
    ||||||||||||  |||||||||||||| |||||||||||||||||| ||  ||||||||    
T  17302606 acttgtaattacattgaattatgtgatttttttcaaattattagttgtgtcagcgtgtca 17302547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 208
Target Start/End: Original strand, 426524 - 426582
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgtca 208  Q
    ||||||||||||  | ||||||||||||||||||||||||||  || || |||||||||    
T  426524 acttgtaattacatttaattatgtgattttttcaaattattaactgtgtcggcgtgtca 426582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 192
Target Start/End: Original strand, 1191710 - 1191752
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattag 192  Q
    |||||||||||| ||||||| ||||| ||||||||||||||||    
T  1191710 acttgtaattacactgaattttgtgaatttttcaaattattag 1191752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 208
Target Start/End: Complemental strand, 7938165 - 7938107
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgtca 208  Q
    |||| ||||||| || |||||| |||||||||||||||||||| || || |||||||||    
T  7938165 acttataattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtca 7938107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 192
Target Start/End: Complemental strand, 17435248 - 17435206
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattag 192  Q
    |||||||||||| ||||||||||| ||||||| ||||||||||    
T  17435248 acttgtaattacactgaattatgtaattttttaaaattattag 17435206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 191
Target Start/End: Original strand, 403874 - 403915
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattatta 191  Q
    ||||||| |||| || ||||||||||||||||||||||||||    
T  403874 acttgtagttacactaaattatgtgattttttcaaattatta 403915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 191
Target Start/End: Original strand, 4118343 - 4118384
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattatta 191  Q
    ||||||||||||  | ||||||||||||||||||||||||||    
T  4118343 acttgtaattacatttaattatgtgattttttcaaattatta 4118384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 192
Target Start/End: Complemental strand, 6665257 - 6665220
Alignment:
Q  155 taattactctgaattatgtgattttttcaaattattag 192  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  6665257 taattactctgaattatgtgatttactcaaattattag 6665220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 192
Target Start/End: Complemental strand, 7151456 - 7151419
Alignment:
Q  155 taattactctgaattatgtgattttttcaaattattag 192  Q
    ||||||| || |||||||||||||||||||||||||||    
T  7151456 taattacacttaattatgtgattttttcaaattattag 7151419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 192
Target Start/End: Original strand, 9025509 - 9025546
Alignment:
Q  155 taattactctgaattatgtgattttttcaaattattag 192  Q
    ||||||| ||||||||||||||||| ||||||||||||    
T  9025509 taattacactgaattatgtgattttctcaaattattag 9025546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 195
Target Start/End: Original strand, 15489742 - 15489787
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattagttg 195  Q
    ||||||||||||  |||||| ||| |||||||||||||||||||||    
T  15489742 acttgtaattacattgaattgtgtaattttttcaaattattagttg 15489787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 191
Target Start/End: Original strand, 17341674 - 17341715
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattatta 191  Q
    |||| ||||||| ||||||||||||||||| |||||||||||    
T  17341674 acttataattacactgaattatgtgattttatcaaattatta 17341715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 192
Target Start/End: Complemental strand, 19040396 - 19040359
Alignment:
Q  155 taattactctgaattatgtgattttttcaaattattag 192  Q
    ||||||| ||||||||||||||||| ||||||||||||    
T  19040396 taattacactgaattatgtgattttctcaaattattag 19040359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 208
Target Start/End: Original strand, 31429015 - 31429071
Alignment:
Q  152 ttgtaattactctgaattatgtga-ttttttcaaattattagttgggttggcgtgtca 208  Q
    |||||||||| ||||||||||||| |||||| |||||||||| |||| ||||||||||    
T  31429015 ttgtaattacactgaattatgtgattttttttaaattattagctggg-tggcgtgtca 31429071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 192
Target Start/End: Complemental strand, 2117111 - 2117083
Alignment:
Q  164 tgaattatgtgattttttcaaattattag 192  Q
    |||||||||||||||||||||||||||||    
T  2117111 tgaattatgtgattttttcaaattattag 2117083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 111
Target Start/End: Original strand, 5732474 - 5732510
Alignment:
Q  75 ctatgaagcatggacactccttggatttggcgtgtcc 111  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  5732474 ctatgaagcatggacactcctcggattaggcgtgtcc 5732510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 143 - 191
Target Start/End: Original strand, 6349740 - 6349788
Alignment:
Q  143 catcaaaacttgtaattactctgaattatgtgattttttcaaattatta 191  Q
    |||||| || |||||||||  |||||||||| |||||||||||||||||    
T  6349740 catcaacacatgtaattacaatgaattatgtaattttttcaaattatta 6349788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 111
Target Start/End: Complemental strand, 10649407 - 10649371
Alignment:
Q  75 ctatgaagcatggacactccttggatttggcgtgtcc 111  Q
    |||||||||| |||||||||||||||| |||||||||    
T  10649407 ctatgaagcacggacactccttggattaggcgtgtcc 10649371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 208
Target Start/End: Original strand, 21424830 - 21424870
Alignment:
Q  168 ttatgtgattttttcaaattattagttgggttggcgtgtca 208  Q
    |||||||||||||||||||||||||  | ||||||||||||    
T  21424830 ttatgtgattttttcaaattattagcggtgttggcgtgtca 21424870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 208
Target Start/End: Original strand, 24115871 - 24115915
Alignment:
Q  164 tgaattatgtgattttttcaaattattagttgggttggcgtgtca 208  Q
    |||||||||||||||||| ||||||||||||| ||  ||||||||    
T  24115871 tgaattatgtgattttttgaaattattagttgtgtcagcgtgtca 24115915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 191
Target Start/End: Original strand, 31579240 - 31579276
Alignment:
Q  155 taattactctgaattatgtgattttttcaaattatta 191  Q
    ||||||| ||||||||||||||||| |||||||||||    
T  31579240 taattacactgaattatgtgattttctcaaattatta 31579276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 192
Target Start/End: Original strand, 32511666 - 32511718
Alignment:
Q  140 cgacatcaaaacttgtaattactctgaattatgtgattttttcaaattattag 192  Q
    ||||| ||| |||| ||||||| ||||||||||||||||| | ||||||||||    
T  32511666 cgacaccaacacttataattacactgaattatgtgattttcttaaattattag 32511718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 1e-25; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 77 - 192
Target Start/End: Original strand, 1486646 - 1486761
Alignment:
Q  77 atgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcgacatcaaaacttgtaattactctgaattatgtgat 176  Q
    ||||||||  ||||||||| ||||| |||||||||  || ||||| |||||||||||||||| ||||| | | |||| ||||||| ||||||||||||||    
T  1486646 atgaagcacagacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacacgacaccgacacttataattacactgaattatgtgat 1486745  T
Q  177 tttttcaaattattag 192  Q
    ||||||||||||||||    
T  1486746 tttttcaaattattag 1486761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 75 - 226
Target Start/End: Complemental strand, 37598950 - 37598804
Alignment:
Q  75 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcgacatcaaaacttgtaattactctgaattatgtg 174  Q
    |||||||||| |||||||||| ||||| |||||||||   | ||||| |||||||||||||||| |     | | |||| ||||||| ||||||| ||||    
T  37598950 ctatgaagcacggacactcctcggattaggcgtgtcccattgtcggacacgtgtcgtgtccgacac-----cgacacttataattacactgaatt-tgtg 37598857  T
Q  175 attttttcaaattattagttgggttggcgtgtca-tgtccggtgtctgtgtcc 226  Q
    ||||||||||||||||||||| || ||||||||| ||||||||||||||||||    
T  37598856 attttttcaaattattagttgtgtcggcgtgtcagtgtccggtgtctgtgtcc 37598804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 76 - 191
Target Start/End: Original strand, 40258874 - 40258984
Alignment:
Q  76 tatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcgacatcaaaacttgtaattactctgaattatgtga 175  Q
    |||||||||||||||||||| ||||| |||||||||| || ||||| | |||||||||| ||| |     | | |||||||||||| |||||||||||||    
T  40258874 tatgaagcatggacactcctcggattaggcgtgtcctggtgtcggacaggtgtcgtgtctgacac-----cgacacttgtaattacactgaattatgtga 40258968  T
Q  176 ttttttcaaattatta 191  Q
    ||||||||||||||||    
T  40258969 ttttttcaaattatta 40258984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 75 - 208
Target Start/End: Original strand, 32461393 - 32461531
Alignment:
Q  75 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcg-----acatcaaaacttgtaattactctgaatt 169  Q
    |||||||||| ||||||| |||||||| |||||||||  || || || |||||||||||||||| |      ||| ||| ||||||||||||  | ||||    
T  32461393 ctatgaagcacggacacttcttggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgacaccgacacacaccaacacttgtaattacattaaatt 32461492  T
Q  170 atgtgattttttcaaattattagttgggttggcgtgtca 208  Q
    |||||||||||||||||||||||||| |  |||||||||    
T  32461493 atgtgattttttcaaattattagttgtgccggcgtgtca 32461531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 75 - 192
Target Start/End: Original strand, 22515827 - 22515939
Alignment:
Q  75 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcgacatcaaaacttgtaattactctgaattatgtg 174  Q
    |||||||||| |||||||||| ||||| ||||||||   || ||||||| |||||||||||||| |     | | |||||||||||| || |||||||||    
T  22515827 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcggatatgtgtcgtgtccgacac-----cgacacttgtaattacactaaattatgtg 22515921  T
Q  175 attttttcaaattattag 192  Q
    ||||||||||||||||||    
T  22515922 attttttcaaattattag 22515939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 156 - 224
Target Start/End: Complemental strand, 9828087 - 9828019
Alignment:
Q  156 aattactctgaattatgtgattttttcaaattattagttgggttggcgtgtcatgtccggtgtctgtgt 224  Q
    |||||| ||||||||||||||||| ||||||||||||| | || |||||||| ||||||||||||||||    
T  9828087 aattacactgaattatgtgattttatcaaattattagtggtgtcggcgtgtcgtgtccggtgtctgtgt 9828019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 150 - 234
Target Start/End: Original strand, 22881626 - 22881716
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgtca------tgtccggtgtctgtgtccatatccgt 234  Q
    |||||||||||| || |||||||||||||||||||||||||||||| || |||||||||      ||||||||||| ||||| ||||||||    
T  22881626 acttgtaattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtcgtgtccggtgtccgtgtctatatccgt 22881716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 150 - 208
Target Start/End: Complemental strand, 113348 - 113290
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgtca 208  Q
    |||||||||||| |||||||||||||||||||||||||||||| || || |||||||||    
T  113348 acttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtca 113290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 73 - 192
Target Start/End: Original strand, 1704933 - 1705044
Alignment:
Q  73 atctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcgacatcaaaacttgtaattactctgaattatg 172  Q
    ||||||||||||||||||||||||||||| ||||||||   || ||||| ||||         ||| ||||| | | |||||||||||| ||||||||||    
T  1704933 atctatgaagcatggacactccttggattaggcgtgtctcggtgtcggacacgtt--------gacacgacaccgacacttgtaattaccctgaattatg 1705024  T
Q  173 tgattttttcaaattattag 192  Q
    ||||||||||||||||||||    
T  1705025 tgattttttcaaattattag 1705044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 75 - 192
Target Start/End: Complemental strand, 51410144 - 51410031
Alignment:
Q  75 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcgacatcaaaacttgtaattactctgaattatgtg 174  Q
    |||||||||| | | |||||||||||| ||||||||   || |||||||||||||||||||||| |     | | |||||||||||| ||||||||||||    
T  51410144 ctatgaagcacgaatactccttggattaggcgtgtctcggtgtcggatacgtgtcgtgtccgacac-----cgacacttgtaattacactgaattatgtg 51410050  T
Q  175 att-ttttcaaattattag 192  Q
    ||| |||||||||||||||    
T  51410049 atttttttcaaattattag 51410031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 150 - 250
Target Start/End: Complemental strand, 21378627 - 21378528
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgt-catgtccggtgtctgtgtccatatccgtattcgtgcttcata 248  Q
    |||||||||||| ||||||||||| |||||||||| ||||||| || || || |||| ||||||| ||||| ||||||||||| |||| |||||||||||    
T  21378627 acttgtaattacactgaattatgtaattttttcaatttattagctgtgtcggtgtgtccatgtcc-gtgtc-gtgtccatatctgtatccgtgcttcata 21378530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 150 - 195
Target Start/End: Original strand, 24577196 - 24577241
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattagttg 195  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  24577196 acttgtaattacactgaattatgtgattttttcaaattattagttg 24577241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 75 - 208
Target Start/End: Original strand, 18556385 - 18556524
Alignment:
Q  75 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactc------gacatcaaaacttgtaattactctgaat 168  Q
    |||||||||| ||||||| || ||||| |||||||||  || |||||||||||||| ||| ||| |      |||| ||| ||||||||||||  | |||    
T  18556385 ctatgaagcacggacacttctcggattaggcgtgtcccagtgtcggatacgtgtcgggtctgacaccgtcacgacaccaatacttgtaattacattaaat 18556484  T
Q  169 tatgtgattttttcaaattattagttgggttggcgtgtca 208  Q
    |||||||| ||||||||||||||| || || |||||||||    
T  18556485 tatgtgatattttcaaattattagctgtgtcggcgtgtca 18556524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 87 - 191
Target Start/End: Original strand, 6612112 - 6612222
Alignment:
Q  87 gacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgact------cgacatcaaaacttgtaattactctgaattatgtgattttt 180  Q
    ||||||||||||||| |||||||||| || ||||| || | |||||||||||       ||||| | | |||||||||||| ||||||||||| ||||||    
T  6612112 gacactccttggattaggcgtgtcctggtgtcggacacatatcgtgtccgacatcgacacgacaccgacacttgtaattacactgaattatgtaattttt 6612211  T
Q  181 tcaaattatta 191  Q
    |||||||||||    
T  6612212 tcaaattatta 6612222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 75 - 190
Target Start/End: Complemental strand, 18337448 - 18337338
Alignment:
Q  75 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcgacatcaaaacttgtaattactctgaattatgtg 174  Q
    |||||||||| |||||||||| ||||  ||| |||||  || ||||| |||||| ||||||||| |     | | |||||||||||| ||||||||||||    
T  18337448 ctatgaagcacggacactcctcggatcaggcatgtcccagtgtcggacacgtgttgtgtccgacac-----cgacacttgtaattacactgaattatgtg 18337354  T
Q  175 attttttcaaattatt 190  Q
    ||||||||||||||||    
T  18337353 attttttcaaattatt 18337338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 150 - 208
Target Start/End: Original strand, 48450597 - 48450655
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgtca 208  Q
    |||||||||||| || |||||||| |||||||||||||||||| || ||||||||||||    
T  48450597 acttgtaattacactaaattatgttattttttcaaattattagctgtgttggcgtgtca 48450655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 208
Target Start/End: Complemental strand, 40917879 - 40917742
Alignment:
Q  75 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgt------ccgactcgacatcaaaacttgtaattactctgaat 168  Q
    |||||||||| ||||| |||| ||||| |||||||||  || ||||| |||||||||||      ||||| ||||| | | |||||||||||| || |||    
T  40917879 ctatgaagcacggacagtcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacacgacaccgagacttgtaattacacttaat 40917780  T
Q  169 tatgtgattttttcaaattattagttgggttggcgtgtca 208  Q
      |||||||||||||||||||||| || || |||||||||    
T  40917779 --tgtgattttttcaaattattagctgtgtcggcgtgtca 40917742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 208
Target Start/End: Original strand, 46348323 - 46348451
Alignment:
Q  75 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcgacatcaaaacttgtaattactctgaattatgtg 174  Q
    |||||||||| |||||| ||| ||||  ||||||||   || ||||| |||||||||||||||| |     | | |||||||||||| || |||||| ||    
T  46348323 ctatgaagcacggacacacctcggatcaggcgtgtctcggtgtcggacacgtgtcgtgtccgacac-----cgacacttgtaattacactaaattatatg 46348417  T
Q  175 attttttcaaattattagttgggttggcgtgtca 208  Q
    |||||||||||||||||| || || |||||||||    
T  46348418 attttttcaaattattagctgtgtcggcgtgtca 46348451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 155 - 231
Target Start/End: Original strand, 43492509 - 43492585
Alignment:
Q  155 taattactctgaattatgtgattttttcaaattattagttgggttggcgtgtcatgtccggtgtctgtgtccatatc 231  Q
    ||||||| | |||||| |||||||| |||||||| |||| | || |||||||| |||||||||||||||||| ||||    
T  43492509 taattacaccgaattacgtgattttctcaaattactagtggtgtcggcgtgtcgtgtccggtgtctgtgtccgtatc 43492585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 75 - 208
Target Start/End: Complemental strand, 47989627 - 47989489
Alignment:
Q  75 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactc------gacatcaaaacttgtaattactctgaat 168  Q
    |||||||||| |||||||||| ||||| |||||||||   | || || | |||||||||||||| |      |||| | | |||||||||||| ||||||    
T  47989627 ctatgaagcacggacactcctcggattaggcgtgtcccgatgtcagacatgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaat 47989528  T
Q  169 tatgtgattttttcaaattattagttgggttggcgtgtca 208  Q
    ||||||||||||| ||||||||| ||| || |||||||||    
T  47989527 tatgtgatttttttaaattatta-ttgtgtcggcgtgtca 47989489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 141 - 192
Target Start/End: Original strand, 18190109 - 18190160
Alignment:
Q  141 gacatcaaaacttgtaattactctgaattatgtgattttttcaaattattag 192  Q
    |||||| | |||||||||||| ||||||||||| ||||||||||||||||||    
T  18190109 gacatcgacacttgtaattacactgaattatgtaattttttcaaattattag 18190160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 77 - 192
Target Start/End: Original strand, 42359391 - 42359501
Alignment:
Q  77 atgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcgacatcaaaacttgtaattactctgaattatgtgat 176  Q
    |||||||| |||||||||| ||||| |||||||||  || ||||| ||  ||| |||||||| |     | | |||||||||||| ||||||| ||||||    
T  42359391 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacacgtcttgtccgacac-----cgacacttgtaattacactgaattttgtgat 42359485  T
Q  177 tttttcaaattattag 192  Q
    ||||||||||||||||    
T  42359486 tttttcaaattattag 42359501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 208
Target Start/End: Complemental strand, 1815306 - 1815248
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgtca 208  Q
    |||||||||||| ||||||||||||||||||| |||| |||| ||| || |||||||||    
T  1815306 acttgtaattacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtca 1815248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 192
Target Start/End: Complemental strand, 31015092 - 31015050
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattag 192  Q
    |||||||||||| ||||||||||||||||| ||||||||||||    
T  31015092 acttgtaattacactgaattatgtgattttctcaaattattag 31015050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 192
Target Start/End: Original strand, 31672905 - 31672947
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattag 192  Q
    |||||||||||| |||||||| |||||||||||||||||||||    
T  31672905 acttgtaattacactgaattaagtgattttttcaaattattag 31672947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 192
Target Start/End: Original strand, 38078671 - 38078713
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattag 192  Q
    ||||||||||||  |||||||||||||||||||||||||||||    
T  38078671 acttgtaattacattgaattatgtgattttttcaaattattag 38078713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 155 - 192
Target Start/End: Original strand, 398780 - 398817
Alignment:
Q  155 taattactctgaattatgtgattttttcaaattattag 192  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  398780 taattacactgaattatgtgattttttcaaattattag 398817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 150 - 195
Target Start/End: Complemental strand, 6332719 - 6332675
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattagttg 195  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||    
T  6332719 acttgtaattacactgaattatgtgat-ttttcaaattattagttg 6332675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 150 - 195
Target Start/End: Original strand, 28273098 - 28273143
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattagttg 195  Q
    |||||||||||| ||||||||| |||||||||||||| ||||||||    
T  28273098 acttgtaattacactgaattatatgattttttcaaatgattagttg 28273143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 150 - 195
Target Start/End: Original strand, 32434726 - 32434771
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattagttg 195  Q
    ||||||||||||  |||||||||||| |||||||||||||||||||    
T  32434726 acttgtaattacaatgaattatgtgactttttcaaattattagttg 32434771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 12443476 - 12443527
Alignment:
Q  156 aattactctgaattatgtgattttttcaaattattagttgggttggcgtgtc 207  Q
    |||||| ||||||||||||||||| |||||||||||| || || ||||||||    
T  12443476 aattacactgaattatgtgattttctcaaattattagctgtgtcggcgtgtc 12443527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 77 - 190
Target Start/End: Original strand, 16297223 - 16297333
Alignment:
Q  77 atgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcgacatcaaaacttgtaattactctgaattatgtgat 176  Q
    |||||||| |||||||||| ||||| |||||||||| || ||||| ||  ||||||||||||   ||  |  |  |||||||||| ||||||| ||||||    
T  16297223 atgaagcacggacactcctcggattaggcgtgtcctggtgtcggacacacgtcgtgtccgac---accccggacattgtaattacactgaattttgtgat 16297319  T
Q  177 tttttcaaattatt 190  Q
    ||||||| ||||||    
T  16297320 tttttcatattatt 16297333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 75 - 138
Target Start/End: Complemental strand, 25934746 - 25934683
Alignment:
Q  75 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgac 138  Q
    |||||||||| |||||||||||||||  ||||| ||| ||| || || ||||||||||||||||    
T  25934746 ctatgaagcacggacactccttggataaggcgtatccccgtgtcagacacgtgtcgtgtccgac 25934683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 155 - 249
Target Start/End: Complemental strand, 36878505 - 36878417
Alignment:
Q  155 taattactctgaattatgtgattttttcaaattattagttgggttggcgtgtcatgtccggtgtctgtgtccatatccgtattcgtgcttcatag 249  Q
    ||||||| ||||||||||||||||| ||||||||||||  | || |||||||||      |||||| ||||| | ||||||| ||||||||||||    
T  36878505 taattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtca------gtgtctatgtccgtgtccgtatccgtgcttcatag 36878417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 202 - 249
Target Start/End: Original strand, 48040536 - 48040583
Alignment:
Q  202 cgtgtcatgtccggtgtctgtgtccatatccgtattcgtgcttcatag 249  Q
    |||||| ||||||||||| || ||||||||||||| ||||||||||||    
T  48040536 cgtgtcgtgtccggtgtccgtatccatatccgtatacgtgcttcatag 48040583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 193
Target Start/End: Original strand, 7918226 - 7918264
Alignment:
Q  155 taattactctgaattatgtgattttttcaaattattagt 193  Q
    ||||||| ||||||||||||||||| |||||||||||||    
T  7918226 taattacactgaattatgtgattttctcaaattattagt 7918264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 9033022 - 9033076
Alignment:
Q  155 taattactctgaattatgtga-ttttttcaaattattagttgggttggcgtgtca 208  Q
    ||||||| ||||||||||||| |||||||||||||||||| | |||| |||||||    
T  9033022 taattacactgaattatgtgatttttttcaaattattagtggtgttgacgtgtca 9033076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 208
Target Start/End: Original strand, 19058866 - 19058924
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgtca 208  Q
    |||||||||||| ||||||||||| || |||| |||||||||| || || |||||||||    
T  19058866 acttgtaattacactgaattatgttatctttttaaattattagctgtgtcggcgtgtca 19058924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 193
Target Start/End: Complemental strand, 34298480 - 34298442
Alignment:
Q  155 taattactctgaattatgtgattttttcaaattattagt 193  Q
    ||||||| ||||||||||||||||| |||||||||||||    
T  34298480 taattacactgaattatgtgattttctcaaattattagt 34298442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 192
Target Start/End: Original strand, 5898281 - 5898318
Alignment:
Q  155 taattactctgaattatgtgattttttcaaattattag 192  Q
    ||||||| ||||||||||||||||||||| ||||||||    
T  5898281 taattacactgaattatgtgattttttcagattattag 5898318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 6427394 - 6427341
Alignment:
Q  155 taattactctgaattatgtgattttttcaaattattagttgggttggcgtgtca 208  Q
    |||||||  |||||||||||||||| ||||||||||||  | ||||||||||||    
T  6427394 taattacattgaattatgtgattttctcaaattattagcggtgttggcgtgtca 6427341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 10572604 - 10572657
Alignment:
Q  155 taattactctgaattatgtgattttttcaaattattagttgggttggcgtgtca 208  Q
    ||||||| | ||||||||||||||| ||||||||||||| | || |||||||||    
T  10572604 taattacaccgaattatgtgattttctcaaattattagtggtgtcggcgtgtca 10572657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 207
Target Start/End: Original strand, 14359532 - 14359588
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgtc 207  Q
    |||||||||||| || |||||||||| |||||||||||||||| || || ||||||||    
T  14359532 acttgtaattacactaaattatgtga-tttttcaaattattagctgtgtcggcgtgtc 14359588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 192
Target Start/End: Original strand, 16927200 - 16927237
Alignment:
Q  155 taattactctgaattatgtgattttttcaaattattag 192  Q
    ||||||| ||||||||| ||||||||||||||||||||    
T  16927200 taattacactgaattatatgattttttcaaattattag 16927237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 192
Target Start/End: Complemental strand, 23738714 - 23738685
Alignment:
Q  163 ctgaattatgtgattttttcaaattattag 192  Q
    ||||||||||||||||||||||||||||||    
T  23738714 ctgaattatgtgattttttcaaattattag 23738685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 192
Target Start/End: Complemental strand, 36906041 - 36906004
Alignment:
Q  155 taattactctgaattatgtgattttttcaaattattag 192  Q
    ||||||||||||||||||||||||| ||| ||||||||    
T  36906041 taattactctgaattatgtgattttctcagattattag 36906004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 192
Target Start/End: Complemental strand, 40181915 - 40181878
Alignment:
Q  155 taattactctgaattatgtgattttttcaaattattag 192  Q
    ||||||| ||||||||||||||||| ||||||||||||    
T  40181915 taattacactgaattatgtgattttctcaaattattag 40181878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 191
Target Start/End: Original strand, 1864895 - 1864931
Alignment:
Q  155 taattactctgaattatgtgattttttcaaattatta 191  Q
    ||||||| ||||||||||||||||| |||||||||||    
T  1864895 taattacactgaattatgtgattttctcaaattatta 1864931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 163 - 191
Target Start/End: Original strand, 9449031 - 9449059
Alignment:
Q  163 ctgaattatgtgattttttcaaattatta 191  Q
    |||||||||||||||||||||||||||||    
T  9449031 ctgaattatgtgattttttcaaattatta 9449059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 207
Target Start/End: Complemental strand, 10233297 - 10233245
Alignment:
Q  155 taattactctgaattatgtgattttttcaaattattagttgggttggcgtgtc 207  Q
    ||||||| ||||||||||||||||| |||| |||||||| | ||||| |||||    
T  10233297 taattacactgaattatgtgattttctcaatttattagtggtgttggtgtgtc 10233245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 136
Target Start/End: Original strand, 10577676 - 10577736
Alignment:
Q  76 tatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccg 136  Q
    ||||||||| |||||||||||||||  ||||||||| ||| || || ||| ||||||||||    
T  10577676 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgcgtcgtgtccg 10577736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 111
Target Start/End: Original strand, 27965940 - 27965976
Alignment:
Q  75 ctatgaagcatggacactccttggatttggcgtgtcc 111  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  27965940 ctatgaagcatggacactcctcggattaggcgtgtcc 27965976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 112
Target Start/End: Original strand, 48415667 - 48415703
Alignment:
Q  76 tatgaagcatggacactccttggatttggcgtgtcct 112  Q
    ||||||||| |||||||||||||||| ||||||||||    
T  48415667 tatgaagcacggacactccttggattaggcgtgtcct 48415703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 2e-24; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 150 - 249
Target Start/End: Complemental strand, 25566890 - 25566787
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattagttgggt---tggc-gtgtcatgtccggtgtctgtgtccatatccgtattcgtgcttc 245  Q
    |||||||||||| |||||||||||||||||||||||||||||| || ||   || | ||||||||||||||||||||||| |||||||||| ||||||||    
T  25566890 acttgtaattacactgaattatgtgattttttcaaattattagctgtgtcagtgtctgtgtcatgtccggtgtctgtgtctatatccgtatccgtgcttc 25566791  T
Q  246 atag 249  Q
    ||||    
T  25566790 atag 25566787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 75 - 208
Target Start/End: Original strand, 36450694 - 36450822
Alignment:
Q  75 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcgacatcaaaacttgtaattactctgaattatgtg 174  Q
    ||||||||||  ||||||||| ||||| |||||||||| || ||||| ||| |||||||||||| |     | | |||||||||||| ||||||| ||||    
T  36450694 ctatgaagcacagacactcctcggattaggcgtgtcctggtgtcggacacgcgtcgtgtccgacac-----ctacacttgtaattacactgaattctgtg 36450788  T
Q  175 attttttcaaattattagttgggttggcgtgtca 208  Q
    ||||||||||||||||||||| || |||||||||    
T  36450789 attttttcaaattattagttgtgtcggcgtgtca 36450822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 75 - 208
Target Start/End: Original strand, 15816058 - 15816197
Alignment:
Q  75 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactc------gacatcaaaacttgtaattactctgaat 168  Q
    |||||||||| ||||||| || ||||| |||||||||  || |||||| ||||||||||||||| |      |||| | | |||| ||||||| || |||    
T  15816058 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggattcgtgtcgtgtccgacaccaacacgacaccgacacttataattacactaaat 15816157  T
Q  169 tatgtgattttttcaaattattagttgggttggcgtgtca 208  Q
    ||||||||||||||||||||||||||| || |||||||||    
T  15816158 tatgtgattttttcaaattattagttgtgtcggcgtgtca 15816197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 74 - 208
Target Start/End: Complemental strand, 31557116 - 31556988
Alignment:
Q  74 tctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcgacatcaaaacttgtaattactctgaattatgt 173  Q
    ||||||| |||||||||| ||||||||| |||||||||| || ||||| | |||||||||| ||| |     | |||||||||||||| |||||||||||    
T  31557116 tctatgaggcatggacacaccttggattaggcgtgtcctggtgtcggacatgtgtcgtgtctgacac-----cgaaacttgtaattacactgaattatgt 31557022  T
Q  174 gattttttcaaattattagttgggttggcgtgtca 208  Q
    ||| ||||||||||||||  || || |||||||||    
T  31557021 gat-ttttcaaattattaactgtgtcggcgtgtca 31556988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 191
Target Start/End: Original strand, 41831875 - 41831991
Alignment:
Q  75 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcgacatcaaaacttgtaattactctgaattatgtg 174  Q
    |||||||| |||||||||||| | ||| | ||||||||  | |||||||||| ||||||||||| | |   | | ||||||| |||| ||||||||||||    
T  41831875 ctatgaagaatggacactcctcgaattagacgtgtcctgttgtcggatacgtatcgtgtccgacaccaacacgacacttgtagttacactgaattatgtg 41831974  T
Q  175 attttttcaaattatta 191  Q
    |||||||||||||||||    
T  41831975 attttttcaaattatta 41831991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 30271301 - 30271375
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgtca-tgtccggtgtctgtg 223  Q
    |||||||||||| ||| |||||||||||||||||||| ||||| || || ||||||||| |||||||||||||||    
T  30271301 acttgtaattacactgcattatgtgattttttcaaatgattagctgtgtcggcgtgtcagtgtccggtgtctgtg 30271375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 150 - 207
Target Start/End: Original strand, 30077397 - 30077454
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgtc 207  Q
    |||||||||||| |||||||||||||| ||||||||||||||| || |||||||||||    
T  30077397 acttgtaattacactgaattatgtgatgttttcaaattattagctgcgttggcgtgtc 30077454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 150 - 194
Target Start/End: Complemental strand, 4948701 - 4948657
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattagtt 194  Q
    |||||||||||| ||||||||||||||||||||||||||||||||    
T  4948701 acttgtaattacactgaattatgtgattttttcaaattattagtt 4948657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 75 - 208
Target Start/End: Complemental strand, 22652106 - 22651967
Alignment:
Q  75 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactc------gacatcaaaacttgtaattactctgaat 168  Q
    |||||||||| |||||||||| ||||| | |||||||  || ||||| || ||||||||||||| |      |||| | | |||||||||||   |||||    
T  22652106 ctatgaagcacggacactcctcggattagacgtgtcccggtgtcggacacatgtcgtgtccgacaccgacacgacaccgacacttgtaattatattgaat 22652007  T
Q  169 tatgtgattttttcaaattattagttgggttggcgtgtca 208  Q
    |||||||||||||||||||||||| || || |||||||||    
T  22652006 tatgtgattttttcaaattattagctgtgtcggcgtgtca 22651967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 76 - 195
Target Start/End: Original strand, 29447040 - 29447165
Alignment:
Q  76 tatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactc------gacatcaaaacttgtaattactctgaatt 169  Q
    ||||||||| |||||||||| ||||| |||||||||| || || || || ||||||||||||| |      |||| | | ||||||| ||||  ||||||    
T  29447040 tatgaagcacggacactcctaggattaggcgtgtcctggtgtcagacacatgtcgtgtccgacaccgacatgacaccgacacttgtagttacattgaatt 29447139  T
Q  170 atgtgattttttcaaattattagttg 195  Q
    |||||||||| |||||||||||||||    
T  29447140 atgtgattttctcaaattattagttg 29447165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 22197752 - 22197808
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgt 206  Q
    |||||||||||| || |||||||||| |||||||||||||||| || ||||||||||    
T  22197752 acttgtaattacactaaattatgtgaatttttcaaattattagctgtgttggcgtgt 22197808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 140 - 208
Target Start/End: Complemental strand, 22596053 - 22595985
Alignment:
Q  140 cgacatcaaaacttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgtca 208  Q
    ||||| ||| |||||||||||| ||||||||||| ||||||| |||||||||| || || |||||||||    
T  22596053 cgacaccaacacttgtaattacactgaattatgttatttttttaaattattagctgtgtcggcgtgtca 22595985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 75 - 208
Target Start/End: Original strand, 29510233 - 29510372
Alignment:
Q  75 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcg------acatcaaaacttgtaattactctgaat 168  Q
    |||||||||| |||||||||| ||||| || ||||||  || ||||| ||| |||||||||||| |       ||| | | |||||||||||  ||||||    
T  29510233 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacactacaccgacacttgtaattatactgaat 29510332  T
Q  169 tatgtgattttttcaaattattagttgggttggcgtgtca 208  Q
    | |||||||||||||||||||||| || || |||||||||    
T  29510333 tttgtgattttttcaaattattagctgtgtcggcgtgtca 29510372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 75 - 138
Target Start/End: Original strand, 34450961 - 34451024
Alignment:
Q  75 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgac 138  Q
    |||||||||| |||||||||||||||  ||||||||| ||| || || ||||||||||||||||    
T  34450961 ctatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgac 34451024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 192
Target Start/End: Original strand, 2572066 - 2572108
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattag 192  Q
    |||||||||||| || |||||||||||||||||||||||||||    
T  2572066 acttgtaattacactaaattatgtgattttttcaaattattag 2572108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 192
Target Start/End: Complemental strand, 8343021 - 8342979
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattag 192  Q
    |||||||||||| || |||||||||||||||||||||||||||    
T  8343021 acttgtaattacactaaattatgtgattttttcaaattattag 8342979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 192
Target Start/End: Complemental strand, 8343365 - 8343323
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattag 192  Q
    |||||||||||| || |||||||||||||||||||||||||||    
T  8343365 acttgtaattacactaaattatgtgattttttcaaattattag 8343323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 208
Target Start/End: Original strand, 13436974 - 13437032
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgtca 208  Q
    |||||| |||||  ||||||||||||||||||||||||||||| || || |||||||||    
T  13436974 acttgttattaccatgaattatgtgattttttcaaattattagctgtgtcggcgtgtca 13437032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 192
Target Start/End: Complemental strand, 18407838 - 18407726
Alignment:
Q  75 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcgacatcaaaacttgtaattactctgaattatgtg 174  Q
    |||||||||| ||||||||||   ||| |||||||||| || ||||| | |||||||||||| |     | | | |||||||||||| ||||||||||||    
T  18407838 ctatgaagcacggacactcctccaattaggcgtgtcctagtgtcggacatgtgtcgtgtccggc-----agcgacacttgtaattacactgaattatgtg 18407744  T
Q  175 attttttcaaattattag 192  Q
    |||||||  |||||||||    
T  18407743 atttttttgaattattag 18407726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 150 - 191
Target Start/End: Complemental strand, 20873118 - 20873077
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattatta 191  Q
    |||||||||||| || ||||||||||||||||||||||||||    
T  20873118 acttgtaattacactaaattatgtgattttttcaaattatta 20873077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 190
Target Start/End: Complemental strand, 40332240 - 40332200
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattatt 190  Q
    |||||||||||| ||||||||||||||||| ||||||||||    
T  40332240 acttgtaattacactgaattatgtgattttctcaaattatt 40332200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 75 - 208
Target Start/End: Original strand, 4673354 - 4673493
Alignment:
Q  75 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgac-tcgacatcaaa-----acttgtaattactctgaat 168  Q
    ||||||||||  ||||||||||||||| ||||||| |  || ||||||| | |||||||||||| || |||  | |     |||||||||||| ||||||    
T  4673354 ctatgaagcacagacactccttggattaggcgtgttccggtgtcggatatgcgtcgtgtccgacatcaacaagacactgatacttgtaattacactgaat 4673453  T
Q  169 tatgtgattttttcaaattattagttgggttggcgtgtca 208  Q
    | | |||||||||||||||||||  || || |||||||||    
T  4673454 tttatgattttttcaaattattatctgtgtcggcgtgtca 4673493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 193
Target Start/End: Complemental strand, 14134743 - 14134705
Alignment:
Q  155 taattactctgaattatgtgattttttcaaattattagt 193  Q
    ||||||| ||||||||||||||||| |||||||||||||    
T  14134743 taattacactgaattatgtgattttctcaaattattagt 14134705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 195
Target Start/End: Complemental strand, 31514922 - 31514876
Alignment:
Q  150 acttgtaattactctgaattatgtgatt-ttttcaaattattagttg 195  Q
    ||||||| |||| ||||||||||||||| ||||||||||||||||||    
T  31514922 acttgtagttacgctgaattatgtgatttttttcaaattattagttg 31514876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 192
Target Start/End: Complemental strand, 3025595 - 3025558
Alignment:
Q  155 taattactctgaattatgtgattttttcaaattattag 192  Q
    ||||||| ||||||||||||||||| ||||||||||||    
T  3025595 taattacactgaattatgtgattttctcaaattattag 3025558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 191
Target Start/End: Original strand, 4298896 - 4298937
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattatta 191  Q
    ||||||||||||  | ||||||||||||||||||||||||||    
T  4298896 acttgtaattacattaaattatgtgattttttcaaattatta 4298937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 192
Target Start/End: Complemental strand, 34897129 - 34897092
Alignment:
Q  155 taattactctgaattatgtgattttttcaaattattag 192  Q
    ||||||| ||||||||||||||||| ||||||||||||    
T  34897129 taattacactgaattatgtgattttctcaaattattag 34897092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 191
Target Start/End: Original strand, 11927101 - 11927137
Alignment:
Q  155 taattactctgaattatgtgattttttcaaattatta 191  Q
    ||||||| ||||||||||||||||| |||||||||||    
T  11927101 taattacactgaattatgtgattttatcaaattatta 11927137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 195
Target Start/End: Original strand, 17468503 - 17468563
Alignment:
Q  135 cgactcgacatcaaaacttgtaattactctgaattatgtgattttttcaaattattagttg 195  Q
    |||| ||||| ||| |||||||||||| | | |||||||||||||| ||||||||| ||||    
T  17468503 cgacacgacaccaacacttgtaattacaccgcattatgtgatttttacaaattatttgttg 17468563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 208
Target Start/End: Original strand, 18170494 - 18170550
Alignment:
Q  152 ttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgtca 208  Q
    ||||||||||  |||||||||| ||||||||||||| ||| ||| || |||||||||    
T  18170494 ttgtaattacattgaattatgtaattttttcaaatttttaattgtgtcggcgtgtca 18170550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 208
Target Start/End: Original strand, 18634062 - 18634118
Alignment:
Q  152 ttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgtca 208  Q
    ||||||||||  |||||||||| ||||||||||||| ||| ||| || |||||||||    
T  18634062 ttgtaattacattgaattatgtaattttttcaaatttttaattgtgtcggcgtgtca 18634118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 192
Target Start/End: Complemental strand, 21465471 - 21465419
Alignment:
Q  140 cgacatcaaaacttgtaattactctgaattatgtgattttttcaaattattag 192  Q
    ||||| ||| ||||||||||||   ||||||| ||||||||||||||||||||    
T  21465471 cgacaccaacacttgtaattacatcgaattatatgattttttcaaattattag 21465419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 207
Target Start/End: Original strand, 24196628 - 24196664
Alignment:
Q  171 tgtgattttttcaaattattagttgggttggcgtgtc 207  Q
    ||||||||||||||||||||||||| || ||||||||    
T  24196628 tgtgattttttcaaattattagttgtgtcggcgtgtc 24196664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 190
Target Start/End: Complemental strand, 44694840 - 44694800
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattatt 190  Q
    |||||||||||| || |||||||||||||||| ||||||||    
T  44694840 acttgtaattacgcttaattatgtgattttttaaaattatt 44694800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 2e-24; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 77 - 192
Target Start/End: Complemental strand, 28918120 - 28918008
Alignment:
Q  77 atgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcgacatcaaaacttgtaattactctgaattatgtgat 176  Q
    |||||||| |||||||||||||||| |||||||||  || ||||| |||||||||||||    ||||| | | |||||||||||| ||||||||||||||    
T  28918120 atgaagcagggacactccttggattaggcgtgtcccagtgtcggacacgtgtcgtgtcca---cgacaccgacacttgtaattacactgaattatgtgat 28918024  T
Q  177 tttttcaaattattag 192  Q
    ||||||||||||||||    
T  28918023 tttttcaaattattag 28918008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 77 - 208
Target Start/End: Original strand, 4987222 - 4987359
Alignment:
Q  77 atgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtcc------gactcgacatcaaaacttgtaattactctgaatta 170  Q
    |||||| | |||||||||| ||||| |||||||||  || ||||| |||||||||||||      ||| || || ||| |||||||||||| ||||||||    
T  4987222 atgaagtacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacacgtcaccaacacttgtaattacactgaatta 4987321  T
Q  171 tgtgattttttcaaattattagttgggttggcgtgtca 208  Q
    |||||||||||||||||||||| || || |||||||||    
T  4987322 tgtgattttttcaaattattagctgtgtcggcgtgtca 4987359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 76 - 208
Target Start/End: Original strand, 15999951 - 16000084
Alignment:
Q  76 tatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactc-gacatcaaaacttgtaattactctgaattatgtg 174  Q
    ||||| ||| |||||||||||||||| |||||||||  || ||||| ||||||||||| ||  || |||| | | ||||||| |||| |||||||||||     
T  15999951 tatgatgcacggacactccttggattaggcgtgtcccggtgtcggacacgtgtcgtgtacgtgtccgacaccgacacttgtagttacactgaattatgtt 16000050  T
Q  175 attttttcaaattattagttgggttggcgtgtca 208  Q
    ||||||| ||||||||||||| || |||||||||    
T  16000051 atttttttaaattattagttgtgtcggcgtgtca 16000084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 75 - 192
Target Start/End: Complemental strand, 27505370 - 27505253
Alignment:
Q  75 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcgacatcaaaacttgtaattactctgaattatgtg 174  Q
    |||||||||| |||||||||| ||||| ||| |||||  || ||||| |||||||||||| ||| ||||| | | |||||||||||| || |||||||||    
T  27505370 ctatgaagcacggacactcctcggattaggcatgtcccggtgtcggacacgtgtcgtgtcagacacgacaccgacacttgtaattacacttaattatgtg 27505271  T
Q  175 attttttcaaattattag 192  Q
    ||||||  ||||||||||    
T  27505270 atttttaaaaattattag 27505253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 75 - 204
Target Start/End: Complemental strand, 55401194 - 55401070
Alignment:
Q  75 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcgacatcaaaacttgtaattactctgaattatgtg 174  Q
    |||||||||| |||||||||| ||||| ||||||||   || ||||| |||||||||||||||| |     | | |||||||||||| || |||||||||    
T  55401194 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacac-----cgacacttgtaattacactaaattatgtg 55401100  T
Q  175 attttttcaaattattagttgggttggcgt 204  Q
    ||||||||||||||||||||| || |||||    
T  55401099 attttttcaaattattagttgtgtcggcgt 55401070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 151 - 219
Target Start/End: Complemental strand, 34910365 - 34910297
Alignment:
Q  151 cttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgtcatgtccggtgtc 219  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| || |||||||| |||| ||||||    
T  34910365 cttgtaattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtcgtgtctggtgtc 34910297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 90 - 208
Target Start/End: Complemental strand, 10955056 - 10954943
Alignment:
Q  90 actccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcgacatcaaaacttgtaattactctgaattatgtgattttttcaaattat 189  Q
    |||||| ||||| |||||||||  || ||||| |||||||||||||||| |     | | |||||| ||||| |||||||||||||||||||||||||||    
T  10955056 actcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgacac-----cgacacttgtgattacactgaattatgtgattttttcaaattat 10954962  T
Q  190 tagttgggttggcgtgtca 208  Q
    |||||| || |||||||||    
T  10954961 tagttgtgtcggcgtgtca 10954943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 150 - 222
Target Start/End: Complemental strand, 28812564 - 28812492
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgtcatgtccggtgtctgt 222  Q
    |||||||| ||| |||||||||||||||| |||||||||||||||| || |||||||| |||||| |||||||    
T  28812564 acttgtaactacactgaattatgtgatttcttcaaattattagttgtgtcggcgtgtcgtgtccgttgtctgt 28812492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 73 - 208
Target Start/End: Complemental strand, 20503586 - 20503456
Alignment:
Q  73 atctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcgacatcaaaacttgtaattactctgaattatg 172  Q
    |||||||||||| |||||||||| ||||| |||||||||  || || || | ||||||||||| || |     | | |||||||||||| ||||||||||    
T  20503586 atctatgaagcacggacactcctcggattaggcgtgtcccggtgtcagacatgtgtcgtgtccaacac-----cgacacttgtaattacactgaattatg 20503492  T
Q  173 tgattttttcaaattattagttgggttggcgtgtca 208  Q
    | |||||||||||||||| |||| || |||||||||    
T  20503491 tcattttttcaaattatttgttgtgtcggcgtgtca 20503456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 129 - 192
Target Start/End: Original strand, 25948876 - 25948939
Alignment:
Q  129 cgtgtccgactcgacatcaaaacttgtaattactctgaattatgtgattttttcaaattattag 192  Q
    |||||||||| ||||| ||| |||| ||||||| ||||||||||||||||||||||||||||||    
T  25948876 cgtgtccgacacgacaccaacacttataattacactgaattatgtgattttttcaaattattag 25948939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 150 - 212
Target Start/End: Complemental strand, 14209162 - 14209100
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgtcatgtc 212  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||| || |||||||| ||||    
T  14209162 acttgtaattacactgaattatgtgattttttaaaattattagttgtgtcggcgtgtcgtgtc 14209100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 75 - 192
Target Start/End: Original strand, 49651716 - 49651838
Alignment:
Q  75 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccg-----actcgacatcaaaacttgtaattactctgaatt 169  Q
    |||||||||| ||||||| || ||||| || ||||||  || ||||||| ||||||||||||     || ||||| | | ||||||||||||  ||||||    
T  49651716 ctatgaagcacggacacttctcggattaggtgtgtcccggtgtcggatatgtgtcgtgtccggtccgacacgacaccgacacttgtaattacagtgaatt 49651815  T
Q  170 atgtgattttttcaaattattag 192  Q
    |||||||||||||||||||||||    
T  49651816 atgtgattttttcaaattattag 49651838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 75 - 208
Target Start/End: Original strand, 41961579 - 41961718
Alignment:
Q  75 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgt------ccgactcgacatcaaaacttgtaattactctgaat 168  Q
    |||||||||| ||||||| || ||||| |||||||||  || ||||| |||||||||||      ||||| ||||| | | |||||||||||| | ||||    
T  41961579 ctatgaagcacggacacttctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacacgacaccgacacttgtaattacaccgaat 41961678  T
Q  169 tatgtgattttttcaaattattagttgggttggcgtgtca 208  Q
     ||||||| |||||||||||||||||| |  |||||||||    
T  41961679 aatgtgatattttcaaattattagttgtgacggcgtgtca 41961718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 150 - 192
Target Start/End: Complemental strand, 26508159 - 26508117
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattag 192  Q
    |||||||||||| ||||||||||||||||||||||||||||||    
T  26508159 acttgtaattacactgaattatgtgattttttcaaattattag 26508117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 192
Target Start/End: Original strand, 3164020 - 3164077
Alignment:
Q  135 cgactcgacatcaaaacttgtaattactctgaattatgtgattttttcaaattattag 192  Q
    |||| ||||||||| ||||||  |||| ||||||||||||||||||||||||||||||    
T  3164020 cgacacgacatcaacacttgttcttacactgaattatgtgattttttcaaattattag 3164077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 225
Target Start/End: Complemental strand, 25775558 - 25775481
Alignment:
Q  150 acttgtaattactctgaattatgtgatt-ttttcaaattattagttgggttggcgtgtca-tgtccggtgtctgtgtc 225  Q
    |||||||||||| ||||||||||||||| ||||||||||||||  || |||||||||||| ||||| ||||| |||||    
T  25775558 acttgtaattacactgaattatgtgattattttcaaattattaaatgtgttggcgtgtcagtgtccagtgtccgtgtc 25775481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 77 - 193
Target Start/End: Complemental strand, 29508567 - 29508450
Alignment:
Q  77 atgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcga-catcaaaacttgtaattactctgaattatgtga 175  Q
    |||||||| ||||||| |||||||| | |||||||  || |||||   |||||||||||||| | | |||| | || | ||||||| ||||||||| |||    
T  29508567 atgaagcacggacacttcttggattagacgtgtcccggtgtcggacgtgtgtcgtgtccgacaccaacatcgacacatataattacactgaattatatga 29508468  T
Q  176 ttttttcaaattattagt 193  Q
    ||||||||||||||||||    
T  29508467 ttttttcaaattattagt 29508450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 70 - 192
Target Start/End: Original strand, 34185047 - 34185175
Alignment:
Q  70 atcatctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgact------cgacatcaaaacttgtaattactc 163  Q
    |||| |||||||||| |||||||||| ||||| |||||||||  || ||||| || |||| ||||||||       ||||| | | |||||||||||| |    
T  34185047 atcaactatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacatgtcttgtccgacatggacacgacaccgacacttgtaattacac 34185146  T
Q  164 tgaattatgtgattttttcaaattattag 192  Q
    |||||| ||||||||||| ||||||||||    
T  34185147 tgaattgtgtgattttttgaaattattag 34185175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 125 - 208
Target Start/End: Complemental strand, 21479193 - 21479109
Alignment:
Q  125 gtgtcgtgtccgactc-gacatcaaaacttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgtca 208  Q
    |||||||||||||| | |||| | | ||| |||||||| ||||||| |||||||||||||||||||||| || || |||||||||    
T  21479193 gtgtcgtgtccgacaccgacaccgacactagtaattacactgaattgtgtgattttttcaaattattagctgtgtcggcgtgtca 21479109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 151 - 250
Target Start/End: Complemental strand, 14747610 - 14747510
Alignment:
Q  151 cttgtaattactctgaattatgtgatt-ttttcaaattattagttgggttggcgtgtca-tgtccggtgt-ctgtgtccatatccgtattcgtgcttcat 247  Q
    ||||||||||| || |||||||||||| ||||||||||||||| || || ||||||||| ||||  |||| | |||||| ||||||||| ||||||||||    
T  14747610 cttgtaattacactaaattatgtgatttttttcaaattattagctgtgtcggcgtgtcagtgtc--gtgtccggtgtccgtatccgtatccgtgcttcat 14747513  T
Q  248 agt 250  Q
    |||    
T  14747512 agt 14747510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 75 - 138
Target Start/End: Original strand, 40993275 - 40993338
Alignment:
Q  75 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgac 138  Q
    ||||||||||||||||||||| ||||| |||||||||  || ||||| | ||||||||||||||    
T  40993275 ctatgaagcatggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgac 40993338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 192
Target Start/End: Complemental strand, 1509588 - 1509546
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattag 192  Q
    |||||||||||| || |||||||||||||||||||||||||||    
T  1509588 acttgtaattacactaaattatgtgattttttcaaattattag 1509546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 208
Target Start/End: Original strand, 8587031 - 8587089
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgtca 208  Q
    |||||||||||| || ||||||||||||||||||||||| ||| || || |||||||||    
T  8587031 acttgtaattacacttaattatgtgattttttcaaattactagatgtgtcggcgtgtca 8587089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 208
Target Start/End: Original strand, 10268496 - 10268554
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgtca 208  Q
    |||||||||||| || ||||||||||||||||||||||||||  || || |||||||||    
T  10268496 acttgtaattacactaaattatgtgattttttcaaattattaactgtgtcggcgtgtca 10268554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 208
Target Start/End: Complemental strand, 11610570 - 11610512
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgtca 208  Q
    |||||||| ||| ||||||||||||||||||| ||||||||||  | ||||||||||||    
T  11610570 acttgtaactacactgaattatgtgatttttttaaattattagcggtgttggcgtgtca 11610512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 192
Target Start/End: Original strand, 21256996 - 21257038
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattag 192  Q
    |||||||||||  ||||||||||||||||||||||||||||||    
T  21256996 acttgtaattatactgaattatgtgattttttcaaattattag 21257038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 192
Target Start/End: Original strand, 51206363 - 51206405
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattag 192  Q
    ||||||| |||| ||||||||||||||||||||||||||||||    
T  51206363 acttgtatttacactgaattatgtgattttttcaaattattag 51206405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 180
Target Start/End: Complemental strand, 7171620 - 7171520
Alignment:
Q  75 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcgacatcaaaacttgtaattactctgaattatgtg 174  Q
    |||||||||||  |||||||||||||| ||||||||   || ||||| |||||||||||||||| |     ||| |||||||||||| | ||||||| ||    
T  7171620 ctatgaagcatatacactccttggattaggcgtgtcgcggtgtcggacacgtgtcgtgtccgacac-----caacacttgtaattacaccgaattatatg 7171526  T
Q  175 attttt 180  Q
    ||||||    
T  7171525 attttt 7171520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 155 - 192
Target Start/End: Complemental strand, 7928494 - 7928457
Alignment:
Q  155 taattactctgaattatgtgattttttcaaattattag 192  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  7928494 taattacactgaattatgtgattttttcaaattattag 7928457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 205
Target Start/End: Complemental strand, 14979224 - 14979175
Alignment:
Q  156 aattactctgaattatgtgattttttcaaattattagttgggttggcgtg 205  Q
    |||||| |||||||||||||||||||||||||||||| || || ||||||    
T  14979224 aattacactgaattatgtgattttttcaaattattagctgtgtcggcgtg 14979175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 152 - 209
Target Start/End: Original strand, 15796306 - 15796363
Alignment:
Q  152 ttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgtcat 209  Q
    |||||||||| ||||||||| |||||||||||||||||||  || || ||||||||||    
T  15796306 ttgtaattacactgaattatatgattttttcaaattattaactgtgtcggcgtgtcat 15796363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 208
Target Start/End: Complemental strand, 40052367 - 40052323
Alignment:
Q  164 tgaattatgtgattttttcaaattattagttgggttggcgtgtca 208  Q
    ||||||||||||||||||||||||||||| || || |||||||||    
T  40052367 tgaattatgtgattttttcaaattattagctgtgtcggcgtgtca 40052323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 150 - 209
Target Start/End: Original strand, 35994748 - 35994806
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgtcat 209  Q
    |||||||||||| ||||||||||||| |||||||||||||||| || || ||| ||||||    
T  35994748 acttgtaattacactgaattatgtga-tttttcaaattattagctgtgtcggcttgtcat 35994806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 129
Target Start/End: Original strand, 5407199 - 5407253
Alignment:
Q  75 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtc 129  Q
    ||||||||||||||||||| ||||||| |||||||||| |  ||||| |||||||    
T  5407199 ctatgaagcatggacactctttggattaggcgtgtcctggcgtcggacacgtgtc 5407253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 208
Target Start/End: Original strand, 10335296 - 10335354
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgtca 208  Q
    ||||||| |||| || || ||||||| ||||||||||||||||||| || |||||||||    
T  10335296 acttgtatttacactaaaatatgtgactttttcaaattattagttgtgtcggcgtgtca 10335354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 208
Target Start/End: Complemental strand, 14216941 - 14216883
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgtca 208  Q
    |||||||||||| ||||||||| |||| |||| ||||||||||||| || | |||||||    
T  14216941 acttgtaattacactgaattatatgatattttaaaattattagttgtgtcgacgtgtca 14216883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 208
Target Start/End: Complemental strand, 14223070 - 14223012
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgtca 208  Q
    |||||||||||| ||||||||| |||| |||| ||||||||||||| || | |||||||    
T  14223070 acttgtaattacactgaattatatgatattttaaaattattagttgtgtcgacgtgtca 14223012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 208
Target Start/End: Complemental strand, 14829738 - 14829681
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgtca 208  Q
    ||||||||||||  ||||||||||||| ||||||||||||||| || || |||||||||    
T  14829738 acttgtaattaccatgaattatgtgat-ttttcaaattattagctgtgtcggcgtgtca 14829681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 192
Target Start/End: Complemental strand, 14832148 - 14832106
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattag 192  Q
    ||||||||||||  ||| |||||||||||||||||||||||||    
T  14832148 acttgtaattacattgagttatgtgattttttcaaattattag 14832106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 192
Target Start/End: Original strand, 26492215 - 26492257
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattag 192  Q
    |||||||||||| ||||||| | ||||||||||||||||||||    
T  26492215 acttgtaattacactgaattgtatgattttttcaaattattag 26492257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 192
Target Start/End: Complemental strand, 11252022 - 11251985
Alignment:
Q  155 taattactctgaattatgtgattttttcaaattattag 192  Q
    ||||||| ||||||||||||||||| ||||||||||||    
T  11252022 taattacactgaattatgtgattttctcaaattattag 11251985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 191
Target Start/End: Original strand, 16192744 - 16192801
Alignment:
Q  134 ccgactcgacatcaaaacttgtaattactctgaattatgtgattttttcaaattatta 191  Q
    ||||| ||||||||| || | ||||||| ||||||||||| ||||| |||||||||||    
T  16192744 ccgacacgacatcaacacatataattacactgaattatgttattttctcaaattatta 16192801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 24633800 - 24633751
Alignment:
Q  165 gaattatgtgattttttcaaattattagttgggttggcgtgtcatgtccg 214  Q
    ||||||||||||||| ||||||||||||| | || ||| |||||||||||    
T  24633800 gaattatgtgattttctcaaattattagtggtgtcggcatgtcatgtccg 24633751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 191
Target Start/End: Complemental strand, 4201440 - 4201404
Alignment:
Q  155 taattactctgaattatgtgattttttcaaattatta 191  Q
    ||||||| || ||||||||||||||||||||||||||    
T  4201440 taattacacttaattatgtgattttttcaaattatta 4201404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 207
Target Start/End: Complemental strand, 12704051 - 12703999
Alignment:
Q  155 taattactctgaattatgtgattttttcaaattattagttgggttggcgtgtc 207  Q
    ||||||| |||||||||||| |||| ||||||||||||| | || ||||||||    
T  12704051 taattacactgaattatgtgcttttctcaaattattagtggtgtcggcgtgtc 12703999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 207
Target Start/End: Original strand, 14840306 - 14840358
Alignment:
Q  155 taattactctgaattatgtgattttttcaaattattagttgggttggcgtgtc 207  Q
    ||||||| ||||||||||||||||| | ||||||||| | | |||||||||||    
T  14840306 taattacactgaattatgtgattttctgaaattattaatggtgttggcgtgtc 14840358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 207
Target Start/End: Complemental strand, 18426993 - 18426941
Alignment:
Q  155 taattactctgaattatgtgattttttcaaattattagttgggttggcgtgtc 207  Q
    ||||||| | ||||||||||||||||| ||||||||||| | || ||||||||    
T  18426993 taattacaccgaattatgtgattttttgaaattattagtggtgtcggcgtgtc 18426941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 77 - 208
Target Start/End: Complemental strand, 13523 - 13391
Alignment:
Q  77 atgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactc-gacatcaaaacttgtaattactctgaattatgtga 175  Q
    |||||||| |||||||||||||||| || ||||||| || || ||  ||||||||||||||| | |||| | |  ||||||||| | |||||||||||||    
T  13523 atgaagcacggacactccttggattaggtgtgtcctagtgtcagacgcgtgtcgtgtccgacaccgacaccgacccttgtaattgcactgaattatgtga 13424  T
Q  176 ttttttcaaattattagttgggttggcgtgtca 208  Q
    |||| ||||||||||||||| || |||||||||    
T  13423 ttttctcaaattattagttgtgtcggcgtgtca 13391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 77 - 208
Target Start/End: Original strand, 21804 - 21936
Alignment:
Q  77 atgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactc-gacatcaaaacttgtaattactctgaattatgtga 175  Q
    |||||||| |||||||||||||||| || ||||||| || || ||  ||||||||||||||| | |||| | |  ||||||||| | |||||||||||||    
T  21804 atgaagcacggacactccttggattaggtgtgtcctagtgtcagacgcgtgtcgtgtccgacaccgacaccgacccttgtaattgcactgaattatgtga 21903  T
Q  176 ttttttcaaattattagttgggttggcgtgtca 208  Q
    |||| ||||||||||||||| || |||||||||    
T  21904 ttttctcaaattattagttgtgtcggcgtgtca 21936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 2e-21; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 75 - 192
Target Start/End: Original strand, 30717459 - 30717582
Alignment:
Q  75 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgact------cgacatcaaaacttgtaattactctgaat 168  Q
    |||||||||| |||||||||||||||| ||||| |||  || ||| | ||||||||||||||||       ||||||| | |||||||||||| ||||||    
T  30717459 ctatgaagcacggacactccttggattaggcgtatcccagtgtcgaacacgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 30717558  T
Q  169 tatgtgattttttcaaattattag 192  Q
    ||||||||||||||||||||||||    
T  30717559 tatgtgattttttcaaattattag 30717582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 75 - 208
Target Start/End: Original strand, 38117099 - 38117227
Alignment:
Q  75 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcgacatcaaaacttgtaattactctgaattatgtg 174  Q
    |||||||||| |||||| ||| ||||| |||||||||  || ||||| |||||| ||||||||| |     ||| |||||||||||| | ||| ||||||    
T  38117099 ctatgaagcacggacacccctcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacac-----caacacttgtaattacaccgaagtatgtg 38117193  T
Q  175 attttttcaaattattagttgggttggcgtgtca 208  Q
    |||||||||||||||||| || || |||||||||    
T  38117194 attttttcaaattattagctgtgtcggcgtgtca 38117227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 77 - 192
Target Start/End: Original strand, 2438661 - 2438771
Alignment:
Q  77 atgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcgacatcaaaacttgtaattactctgaattatgtgat 176  Q
    |||||||| |||||||||| ||||| |||||||||  || ||||| | |||||||||||||| |     | | |||||||||||| ||||||||||||||    
T  2438661 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacac-----cgacacttgtaattacactgaattatgtgat 2438755  T
Q  177 tttttcaaattattag 192  Q
    ||||| ||||||||||    
T  2438756 tttttgaaattattag 2438771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 77 - 206
Target Start/End: Complemental strand, 15657992 - 15657857
Alignment:
Q  77 atgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgact------cgacatcaaaacttgtaattactctgaatta 170  Q
    ||||||||||||||||||| ||| | |||||||||  |  ||||| |||||||| |||||||       ||||| | | | |||||||||| ||||||||    
T  15657992 atgaagcatggacactcctcggactaggcgtgtcccggcgtcggacacgtgtcgcgtccgacatcaacacgacaccgacatttgtaattacactgaatta 15657893  T
Q  171 tgtgattttttcaaattattagttgggttggcgtgt 206  Q
    |||||||||| |||||||||||||| || |||||||    
T  15657892 tgtgatttttacaaattattagttgagtcggcgtgt 15657857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 150 - 209
Target Start/End: Original strand, 19536407 - 19536467
Alignment:
Q  150 acttgtaattactctgaattatgtga-ttttttcaaattattagttgggttggcgtgtcat 209  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||| || ||||||||||    
T  19536407 acttgtaattacactgaattatgtgatttttttcaaattattagttgtgtcggcgtgtcat 19536467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 251
Target Start/End: Original strand, 21374709 - 21374811
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgtca-tgtccggtgt-ctgtgtccatatccgtattcgtgcttcat 247  Q
    |||||||||||| ||||||||||| |||||||||||||||||| || || ||||||| | ||||| |||| | |||||| | ||||||| ||||||||||    
T  21374709 acttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgttagtgtcc-gtgtccggtgtccgtgtccgtatccgtgcttcat 21374807  T
Q  248 agtt 251  Q
    ||||    
T  21374808 agtt 21374811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 71 - 207
Target Start/End: Complemental strand, 26769645 - 26769503
Alignment:
Q  71 tcatctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgt------ccgactcgacatcaaaacttgtaattactct 164  Q
    |||||||||||||| |||||||||| ||||| |||||||||  || ||||| |||||||||||      |||||  |||| | | |||||||||||| |     
T  26769645 tcatctatgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacatgacaccgacacttgtaattacacc 26769546  T
Q  165 gaattatgtgattttttcaaattattagttgggttggcgtgtc 207  Q
      || ||||||| |||||||||||||||||| || ||||||||    
T  26769545 agataatgtgatattttcaaattattagttgtgtcggcgtgtc 26769503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 126 - 195
Target Start/End: Complemental strand, 974820 - 974751
Alignment:
Q  126 tgtcgtgtccgactcgacatcaaaacttgtaattactctgaattatgtgattttttcaaattattagttg 195  Q
    |||||||||| || ||||| | | |||||||||||| |||||| ||||||| ||||||||||||||||||    
T  974820 tgtcgtgtccaacacgacaccgacacttgtaattacactgaataatgtgatcttttcaaattattagttg 974751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 208
Target Start/End: Original strand, 18840953 - 18841081
Alignment:
Q  75 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcgacatcaaaacttgtaattactctgaattatgtg 174  Q
    |||||||||| |||||||||| ||||| || ||||||  || ||||| | |||||||||| ||| |     | | |||||||||||| || ||||||||     
T  18840953 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacatgtgtcgtgtctgacac-----cgacacttgtaattacacttaattatgta 18841047  T
Q  175 attttttcaaattattagttgggttggcgtgtca 208  Q
    ||||||||||||||||||||| ||  ||||||||    
T  18841048 attttttcaaattattagttgtgtcagcgtgtca 18841081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 191
Target Start/End: Original strand, 30404860 - 30404901
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattatta 191  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  30404860 acttgtaattacactgaattatgtgattttttcaaattatta 30404901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 74 - 138
Target Start/End: Complemental strand, 24009415 - 24009351
Alignment:
Q  74 tctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgac 138  Q
    ||||||||||| |||||||||||||||  ||||||||| ||| || || ||||||||||||||||    
T  24009415 tctatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgac 24009351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 152 - 195
Target Start/End: Original strand, 12940947 - 12940990
Alignment:
Q  152 ttgtaattactctgaattatgtgattttttcaaattattagttg 195  Q
    |||||||||| ||||||||| |||||||||||||||||||||||    
T  12940947 ttgtaattacactgaattatatgattttttcaaattattagttg 12940990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 208
Target Start/End: Original strand, 12668433 - 12668491
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgtca 208  Q
    |||| ||||||| ||||||||||| ||||||||||||||||||||  || |||||||||    
T  12668433 acttataattacactgaattatgtcattttttcaaattattagttatgtcggcgtgtca 12668491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 208
Target Start/End: Complemental strand, 15972922 - 15972864
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgtca 208  Q
    |||||||||||| ||||||| ||| ||||||||||||||||| ||| || |||||||||    
T  15972922 acttgtaattacactgaattgtgtaattttttcaaattattaattgtgtcggcgtgtca 15972864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 208
Target Start/End: Complemental strand, 18422012 - 18421954
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgtca 208  Q
    |||||||||||| |||||||||||||| |||| ||||||||| ||| || |||||||||    
T  18422012 acttgtaattacactgaattatgtgatatttttaaattattaattgtgtcggcgtgtca 18421954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 208
Target Start/End: Complemental strand, 24894458 - 24894380
Alignment:
Q  130 gtgtccgactcgacatcaaaacttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgtca 208  Q
    ||||||||| ||| | ||| |||| ||||| | ||||||||||||||||||| |||||||||| || || |||||||||    
T  24894458 gtgtccgacacgaaaccaacacttttaattgcactgaattatgtgatttttttaaattattagctgtgtcggcgtgtca 24894380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 190
Target Start/End: Complemental strand, 37419873 - 37419752
Alignment:
Q  75 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactc------gacatcaaaacttgtaattactctgaat 168  Q
    |||||||||| |||||||||| ||||| |||||||||  || ||||| |||  ||||||||||| |      |||| |   |||||||||||| ||||||    
T  37419873 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgcatcgtgtccgacaccgacacgacaccggcacttgtaattacactgaat 37419774  T
Q  169 tatgtgattttttcaaattatt 190  Q
    | ||||||||||||||||||||    
T  37419773 tttgtgattttttcaaattatt 37419752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 208
Target Start/End: Complemental strand, 37559026 - 37558968
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgtca 208  Q
    ||||||||||||  ||||||||||||||||| ||||||||||| || || |||||||||    
T  37559026 acttgtaattacattgaattatgtgatttttacaaattattagctgtgtcggcgtgtca 37558968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 150 - 249
Target Start/End: Original strand, 20539684 - 20539783
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgtca-tgtccggtgtctgtgtcca-tatccgtattcgtgcttcat 247  Q
    |||||||||||| || |||||| |||||||||||||||||||| || || | ||||||| ||||| ||||| ||||||| | ||||||| ||||||||||    
T  20539684 acttgtaattacactaaattatatgattttttcaaattattagctgtgtcgacgtgtcagtgtcc-gtgtc-gtgtccagtgtccgtatccgtgcttcat 20539781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 155 - 192
Target Start/End: Complemental strand, 28677953 - 28677916
Alignment:
Q  155 taattactctgaattatgtgattttttcaaattattag 192  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  28677953 taattacactgaattatgtgattttttcaaattattag 28677916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 152 - 205
Target Start/End: Complemental strand, 30335464 - 30335411
Alignment:
Q  152 ttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtg 205  Q
    |||||||||| || |||||||| ||||||||||||||||||||| || ||||||    
T  30335464 ttgtaattacactaaattatgtcattttttcaaattattagttgtgtcggcgtg 30335411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 208
Target Start/End: Complemental strand, 20473381 - 20473313
Alignment:
Q  140 cgacatcaaaacttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgtca 208  Q
    ||||||| | |||||||||||| ||||||||| ||| ||||| ||||||||||||| || ||| |||||    
T  20473381 cgacatcgacacttgtaattacactgaattatatgagttttttaaattattagttgtgtcggcatgtca 20473313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 150 - 208
Target Start/End: Original strand, 23058452 - 23058511
Alignment:
Q  150 acttgtaattactctgaattatgtga-ttttttcaaattattagttgggttggcgtgtca 208  Q
    |||||||||||| ||| ||||||||| |||||||||||||||| ||| || |||||||||    
T  23058452 acttgtaattacactggattatgtgatttttttcaaattattaattgtgtgggcgtgtca 23058511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 192
Target Start/End: Original strand, 4882690 - 4882748
Alignment:
Q  134 ccgactcgacatcaaaacttgtaattactctgaattatgtgattttttcaaattattag 192  Q
    ||||| ||||||| | |||||||||||| ||||||||| | |||||||||||| |||||    
T  4882690 ccgacacgacatcgacacttgtaattacactgaattatatcattttttcaaataattag 4882748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 192
Target Start/End: Original strand, 11223873 - 11223915
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattag 192  Q
    |||||||||||| ||||||||||| ||||||||||| ||||||    
T  11223873 acttgtaattacactgaattatgttattttttcaaaatattag 11223915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 138
Target Start/End: Complemental strand, 28596587 - 28596525
Alignment:
Q  76 tatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgac 138  Q
    ||||||||| |||||||||| ||||| || ||||||  || ||||| ||||||||||||||||    
T  28596587 tatgaagcacggacactcctcggattaggagtgtccgagtgtcggacacgtgtcgtgtccgac 28596525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 192
Target Start/End: Complemental strand, 33153473 - 33153431
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattag 192  Q
    |||||||||||| ||||||||||||||||||| |||| |||||    
T  33153473 acttgtaattacactgaattatgtgatttttttaaatcattag 33153431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 208
Target Start/End: Original strand, 36756354 - 36756412
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgtca 208  Q
    |||| ||||||| ||||||||||| |||| |||||||||||||||| || | |||||||    
T  36756354 acttataattacactgaattatgttatttcttcaaattattagttgtgtcgacgtgtca 36756412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 192
Target Start/End: Complemental strand, 39323313 - 39323271
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattag 192  Q
    |||||||||||| ||||||||||| ||||| ||||||||||||    
T  39323313 acttgtaattacactgaattatgtaattttgtcaaattattag 39323271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 192
Target Start/End: Complemental strand, 21616806 - 21616769
Alignment:
Q  155 taattactctgaattatgtgattttttcaaattattag 192  Q
    ||||||| ||||||||||||||||| ||||||||||||    
T  21616806 taattacactgaattatgtgattttctcaaattattag 21616769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 192
Target Start/End: Original strand, 21782833 - 21782870
Alignment:
Q  155 taattactctgaattatgtgattttttcaaattattag 192  Q
    ||||||| ||||||||||||||||| ||||||||||||    
T  21782833 taattacactgaattatgtgattttctcaaattattag 21782870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 193
Target Start/End: Complemental strand, 11670789 - 11670761
Alignment:
Q  165 gaattatgtgattttttcaaattattagt 193  Q
    |||||||||||||||||||||||||||||    
T  11670789 gaattatgtgattttttcaaattattagt 11670761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 208
Target Start/End: Original strand, 18420458 - 18420502
Alignment:
Q  164 tgaattatgtgattttttcaaattattagttgggttggcgtgtca 208  Q
    |||||||||||||||| ||||||||||||  | ||||||||||||    
T  18420458 tgaattatgtgattttctcaaattattagcagtgttggcgtgtca 18420502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 111
Target Start/End: Original strand, 19536361 - 19536397
Alignment:
Q  75 ctatgaagcatggacactccttggatttggcgtgtcc 111  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  19536361 ctatgaagcatggacactcctcggattaggcgtgtcc 19536397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 191
Target Start/End: Complemental strand, 28412394 - 28412358
Alignment:
Q  155 taattactctgaattatgtgattttttcaaattatta 191  Q
    ||||||| ||||||||||||||||| |||||||||||    
T  28412394 taattacactgaattatgtgattttatcaaattatta 28412358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 74 - 207
Target Start/End: Complemental strand, 14647 - 14522
Alignment:
Q  74 tctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcgacatcaaaacttgtaattactctgaattatgt 173  Q
    ||||||||||| | ||||||||| |||| ||||||||   || ||||| |||||||||||||||| | ||        |||||||||| |||||||||||    
T  14647 tctatgaagcacgtacactccttcgattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccac--------ttgtaattacactgaattatgt 14556  T
Q  174 gattttttcaaattattagttgggttggcgtgtc 207  Q
    |||||||||||||||||||||| || ||||||||    
T  14555 gattttttcaaattattagttgtgtcggcgtgtc 14522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 150 - 209
Target Start/End: Complemental strand, 20221 - 20162
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgtcat 209  Q
    |||||||||||| |||||||||||||||||||||||||||||| || || ||||||||||    
T  20221 acttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcat 20162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 73 - 181
Target Start/End: Original strand, 4819 - 4924
Alignment:
Q  73 atctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcgacatcaaaacttgtaattactctgaattatg 172  Q
    |||||||||||| |||||||||| ||||| |||||||||  || ||||| | |||||||||   ||  |||| ||| |||||||||||| ||||||||||    
T  4819 atctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgt---acaagacaccaacacttgtaattacactgaattatg 4915  T
Q  173 tgatttttt 181  Q
    |||||||||    
T  4916 tgatttttt 4924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 150 - 208
Target Start/End: Complemental strand, 51860 - 51802
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgtca 208  Q
    |||||||||||| |||||||||||||||||||||||||||||| || || |||||||||    
T  51860 acttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtca 51802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 76 - 192
Target Start/End: Original strand, 403 - 514
Alignment:
Q  76 tatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcgacatcaaaacttgtaattactctgaattatgtga 175  Q
    ||||||||| |||||||||| ||||| || ||||||  || ||||| ||| |||||||||||| |     | | |||||||||||| ||||||| |||||    
T  403 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacac-----cgacacttgtaattacactgaattttgtga 497  T
Q  176 ttttttcaaattattag 192  Q
    |||||||||||||||||    
T  498 ttttttcaaattattag 514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 208
Target Start/End: Original strand, 178828 - 178887
Alignment:
Q  150 acttgtaattactctgaattatg-tgattttttcaaattattagttgggttggcgtgtca 208  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||| || |||||||||    
T  178828 acttgtaattacactgaattatgatgattttttcaaattattagttgtgtcggcgtgtca 178887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 73 - 208
Target Start/End: Complemental strand, 241726 - 241585
Alignment:
Q  73 atctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccg------actcgacatcaaaacttgtaattactctga 166  Q
    |||||||||||| ||||||| || ||||| |||||||||  || ||||| ||||||||||||||      || ||||| | | |||  ||||||| || |    
T  241726 atctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccaacacgacaccgacactcataattacactaa 241627  T
Q  167 attatgtgattttttcaaattattagttgggttggcgtgtca 208  Q
    |||||||||||||| ||||||||||| || || |||||||||    
T  241626 attatgtgatttttccaaattattagctgtgtcggcgtgtca 241585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 209
Target Start/End: Complemental strand, 46729 - 46672
Alignment:
Q  152 ttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgtcat 209  Q
    |||||||||| |||||||||||||||||||||||||||||  || || ||||||||||    
T  46729 ttgtaattacactgaattatgtgattttttcaaattattaactgtgtcggcgtgtcat 46672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 195
Target Start/End: Original strand, 17759 - 17804
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattagttg 195  Q
    |||||||||||| || ||||||||||||||||||||||||||||||    
T  17759 acttgtaattacactaaattatgtgattttttcaaattattagttg 17804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 117 - 208
Target Start/End: Complemental strand, 19657 - 19567
Alignment:
Q  117 tcggatacgtgtcgtgtccgactc-gacatcaaaacttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgtca 208  Q
    ||||| ||||||||||||| || | ||||| || |||||||||||| |||||||||||||| ||||||||||||||||||  | |||||||||    
T  19657 tcggacacgtgtcgtgtccaacaccgacat-aacacttgtaattacactgaattatgtgat-ttttcaaattattagttgtatcggcgtgtca 19567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 152 - 207
Target Start/End: Original strand, 33375 - 33430
Alignment:
Q  152 ttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgtc 207  Q
    |||||||||| ||||||||||| |||||||||||||||||| || || ||||||||    
T  33375 ttgtaattacactgaattatgttattttttcaaattattagctgtgtcggcgtgtc 33430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 208
Target Start/End: Complemental strand, 8919 - 8789
Alignment:
Q  73 atctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcgacatcaaaacttgtaattactctgaattatg 172  Q
    |||||||||||| ||| ||||||  |||| ||||||||   || ||||| |||||||||||||||| |     | | |||||||||||| || ||| ||     
T  8919 atctatgaagcacggagactcctcagattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacac-----cgacacttgtaattacactaaataata 8825  T
Q  173 tgattttttcaaattattagttgggttggcgtgtca 208  Q
    |||||||||||||||||||| || || |||||||||    
T  8824 tgattttttcaaattattagctgtgtcggcgtgtca 8789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 150 - 207
Target Start/End: Original strand, 7321 - 7378
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgtc 207  Q
    |||| ||||||| || ||||||||||||||| |||||||||||||| || ||||||||    
T  7321 acttataattacactaaattatgtgatttttccaaattattagttgtgtcggcgtgtc 7378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 125 - 249
Target Start/End: Complemental strand, 23494 - 23371
Alignment:
Q  125 gtgtcgtgtccgactcgacatcaaaacttgtaattactctgaattatgtgattttttcaaattattagttgggttggcgtgtca-tgtccggtgtctgtg 223  Q
    |||||||||||||| ||||| | | |||| ||||||| |||||||||||||||||||  | ||||||  || || ||||||||| ||| | ||||| |||    
T  23494 gtgtcgtgtccgacacgacaccgacacttataattacactgaattatgtgatttttttgagttattatctgtgtcggcgtgtcagtgt-ctgtgtc-gtg 23397  T
Q  224 tccatatccgtattcgtgcttcatag 249  Q
    ||| | ||||||| ||||||||||||    
T  23396 tccgtgtccgtatccgtgcttcatag 23371  T

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Target: scaffold0136 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 150 - 191
Target Start/End: Original strand, 3859 - 3900
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattatta 191  Q
    |||||||||||| ||||||||||||||||||| |||||||||    
T  3859 acttgtaattacactgaattatgtgatttttttaaattatta 3900  T

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Target: scaffold0050 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 78 - 191
Target Start/End: Complemental strand, 70394 - 70286
Alignment:
Q  78 tgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcgacatcaaaacttgtaattactctgaattatgtgatt 177  Q
    ||||||| | |||||| | ||||| ||| |||||| || ||||| |||||||||||||||| |     | | |||| ||||||| ||||||||||| |||    
T  70394 tgaagcacgaacactcatcggattaggcatgtcctggtgtcggacacgtgtcgtgtccgacac-----cgacacttataattacactgaattatgttatt 70300  T
Q  178 ttttcaaattatta 191  Q
    ||||||||||||||    
T  70299 ttttcaaattatta 70286  T

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Target: scaffold0021 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 150 - 191
Target Start/End: Complemental strand, 130531 - 130490
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattatta 191  Q
    |||||||||||| ||||||||||||||||||||||| |||||    
T  130531 acttgtaattacactgaattatgtgattttttcaaactatta 130490  T

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Target: scaffold0122 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 207
Target Start/End: Complemental strand, 8054 - 8002
Alignment:
Q  155 taattactctgaattatgtgattttttcaaattattagttgggttggcgtgtc 207  Q
    ||||||| ||| ||||| ||||||||||||||||||||||| || ||||||||    
T  8054 taattacactgtattatatgattttttcaaattattagttgtgtcggcgtgtc 8002  T

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Target: scaffold0004 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 150 - 208
Target Start/End: Complemental strand, 123677 - 123616
Alignment:
Q  150 acttgtaattactctgaattatgtga---ttttttcaaattattagttgggttggcgtgtca 208  Q
    |||||||||||| |||||||||||||   |||||| |||||||||| || ||||||||||||    
T  123677 acttgtaattacactgaattatgtgattctttttttaaattattagctgtgttggcgtgtca 123616  T

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Target: scaffold0004; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 192
Target Start/End: Complemental strand, 92856 - 92814
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattattag 192  Q
    |||||||||||| ||||||||||| ||||| ||||||||||||    
T  92856 acttgtaattacactgaattatgtaattttctcaaattattag 92814  T

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Target: scaffold0450 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 208
Target Start/End: Original strand, 8562 - 8703
Alignment:
Q  73 atctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccga------ctcgacatcaaaacttgtaattactctga 166  Q
    |||||||||||| |||||||||| | ||| ||||||| |  || ||||| |||| ||||||||||      | ||||| | | | |||||||||  | ||    
T  8562 atctatgaagcacggacactcctcgaattaggcgtgtaccagtgtcggacacgtatcgtgtccgataccgacacgacaccgacatttgtaattataccga 8661  T
Q  167 attatgtgattttttcaaattattagttgggttggcgtgtca 208  Q
    |||||||||| |||||||||||||||||| || ||| |||||    
T  8662 attatgtgatattttcaaattattagttgtgtcggcatgtca 8703  T

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Target: scaffold0380 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 133
Target Start/End: Complemental strand, 8720 - 8662
Alignment:
Q  75 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgt 133  Q
    |||||||||| |||||||||||||||| ||||| |||  || ||||| |||||||||||    
T  8720 ctatgaagcacggacactccttggattaggcgtatcccagtgtcggacacgtgtcgtgt 8662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 191
Target Start/End: Complemental strand, 23819 - 23777
Alignment:
Q  150 acttgtaattactctgaattatgtgatt-ttttcaaattatta 191  Q
    |||||||||||| ||||||||||||||| ||||||||||||||    
T  23819 acttgtaattacactgaattatgtgatttttttcaaattatta 23777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 190
Target Start/End: Complemental strand, 53229 - 53189
Alignment:
Q  150 acttgtaattactctgaattatgtgattttttcaaattatt 190  Q
    |||| ||||||| ||||||||||||||||| ||||||||||    
T  53229 acttataattacactgaattatgtgattttctcaaattatt 53189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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