View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7812_low_6 (Length: 407)
Name: NF7812_low_6
Description: NF7812
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7812_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 290; Significance: 1e-162; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 290; E-Value: 1e-162
Query Start/End: Original strand, 19 - 345
Target Start/End: Original strand, 17892168 - 17892496
Alignment:
| Q |
19 |
ccaatccactacttccctctgcctctcttttgaaaatgaataaagaatcattcaaggactaaaacacatatattaaacatcattccaattgaaactattt |
118 |
Q |
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| T |
17892168 |
ccaatccactatttccctctgcctctcttttgaaaatgaataaagaatcattcaaggactaaaacacatatattaaacatcattccaattgaaactattt |
17892267 |
T |
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| Q |
119 |
atttaaaagaataataaatattcatccattaatgtaaaacatcagtatgaaaatattgaatcttgcgataaataagttcaaattataaagtataattcaa |
218 |
Q |
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| T |
17892268 |
atttaaaaaaataataaatattcatccattaatgtaaaacatcagtatgaaaatatttaatcttgcgataaataagttcaaattataaagtataatttaa |
17892367 |
T |
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| Q |
219 |
ctatgttatttgtaaaaggaataatttttgtgaccctatggtaaaaataatttcactcattctcagattaacctaagtgatcatcctctagtaa--atat |
316 |
Q |
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| T |
17892368 |
ctatgttgtttgtaaaaggaataatttttgtgaccctatggtaaaaataatttcactcatcctcagattaacctaagtgatcatcctctaataaatatat |
17892467 |
T |
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| Q |
317 |
tcatattgcctttggagaaatgatcctct |
345 |
Q |
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| T |
17892468 |
tcatattgcctttggagaaatgatcctct |
17892496 |
T |
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