View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF7814_high_17 (Length: 364)
Name: NF7814_high_17
Description: NF7814
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7814_high_17 |
 | |
|
Alignment Details
Target: chr2 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 118
Target Start/End: Complemental strand, 42530697 - 42530652
Alignment:
| Q |
73 |
aaacattgtgtaaagtttgggaaagatacaagtctatgttgagaaa |
118 |
Q |
| |
|
||||||||| | ||| ||||||||||||||||||||||||||||| |
|
|
| T |
42530697 |
aaacattgtatgaagcgtgggaaagatacaagtctatgttgagaaa |
42530652 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University