View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7814_low_25 (Length: 331)
Name: NF7814_low_25
Description: NF7814
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7814_low_25 |
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Alignment Details
Target: chr4 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 32 - 314
Target Start/End: Original strand, 27490401 - 27490680
Alignment:
| Q |
32 |
atgaaaacacagagttgtattctgagaaatcttaaagctggtaaaaacacatggctcctagcaacttggcaagggcagagaaaaagataattttcgatca |
131 |
Q |
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| T |
27490401 |
atgaaaacacagagttgtattctgagaaaacttaaagccggtaaaaacacatggctcctagcaacttggcaagggcagagaaaaagataattttcgatca |
27490500 |
T |
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| Q |
132 |
aaagtgattaatattttttgttttggatttgaaggcttgatcacatgatgcaccttcccttcctaggcatatttacaaatcagtgatttaagatgaatca |
231 |
Q |
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| T |
27490501 |
aaagtgattaatattttttgttttggatttgaaggcttgatcacatgatgcaccttcctttcctaggcatatttacaaatcagtgatttaagatgaatca |
27490600 |
T |
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| Q |
232 |
gtagaac-agcaaaatcctagctaattataatagaaattaaaggcattctttcctaccgttgaagtgtggtttgtctatatttc |
314 |
Q |
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| T |
27490601 |
gtagaacgagcaaaatc----ctaattataatagaaattaaaggcattctttcctaccgttgaagtgtggtttgtctatatttc |
27490680 |
T |
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