View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7814_low_41 (Length: 240)
Name: NF7814_low_41
Description: NF7814
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7814_low_41 |
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Alignment Details
Target: chr1 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 4 - 225
Target Start/End: Original strand, 11349734 - 11349955
Alignment:
| Q |
4 |
ttcaatacacgtctagaaaattcaatcaaaacgccatataatacaaatcacaagtgaataaaatgaacgatccattaaaccatcacatcacacaaattaa |
103 |
Q |
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| T |
11349734 |
ttcaatacacgtctagaaaattcaatcaaaacgtcatataatacaaatcacaagtgaataaaatgaacgatgcattaaaccatcacatcacacaaattaa |
11349833 |
T |
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| Q |
104 |
gatattcatcaaagaaagcttaaaatgtactcacatatgatgatgttttcaaccaacaattccttcaaaagggaagaaaaagaagaaactaaacgattca |
203 |
Q |
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| T |
11349834 |
gatattcatcaaagaaagcttaaaatgtactcacatatgatgatgttttcaaccaacaattccttcaaaaggaaagaaaaagaagaaactaaacgattca |
11349933 |
T |
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| Q |
204 |
aaattaaatgcaaggatgaaaa |
225 |
Q |
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| T |
11349934 |
aaagtaaatgcaaggatgaaaa |
11349955 |
T |
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