View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7816_high_15 (Length: 246)
Name: NF7816_high_15
Description: NF7816
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7816_high_15 |
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Alignment Details
Target: chr8 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 35746973 - 35746730
Alignment:
| Q |
1 |
tcaagtgattcaggttggacaccagtttgaaacataccgaa-caaaggataaataacataaccagaaccaaagccagcctaaaatatcaaaataaacaat |
99 |
Q |
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| T |
35746973 |
tcaagtgattcaggttggacaccagtttgaaacataccgaaacaaaggataaataacataaccagaaccaaagccagcctaaaatatcaaaataaacaat |
35746874 |
T |
|
| Q |
100 |
cgacaaagcaaatcgaggatgattaagaaagcaaagcaagtaggtaagaattgaaaaaaccttgtcggcggcagcagcaacacccttattcataggcacg |
199 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
35746873 |
cgacaaagcaaatcgaggatgattaagaaagcaaagcaagtaggtaagaattgaaaaaaccttgtcggcggcagcagcaacacccttattcatagacacg |
35746774 |
T |
|
| Q |
200 |
gtggatgggaaaatcgctttcaaaagaaaatcaatattcttcga |
243 |
Q |
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|||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
35746773 |
gtggatgggaaaatcgctttcaaaagaaaatcaataatcttcga |
35746730 |
T |
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