View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7816_low_13 (Length: 352)
Name: NF7816_low_13
Description: NF7816
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7816_low_13 |
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Alignment Details
Target: chr7 (Bit Score: 178; Significance: 6e-96; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 82 - 336
Target Start/End: Complemental strand, 30078609 - 30078355
Alignment:
| Q |
82 |
ttgactacttgtattgactctaaattccctaccaaactcaagatgggaaaagttgaaaacaaaacaaaattccaactcattcttnnnnnnnnnnnnccac |
181 |
Q |
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| T |
30078609 |
ttgactacttgtattgactctaaattctctaccaaactcaagatggggaaagttgaaaacaaaacaaaattccaactcattctttctctctctctcccac |
30078510 |
T |
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| Q |
182 |
aaaatttaatgcacactaactccctcattgagatttgaaacttgaatctctccacaaaaatccagtattaaatgctacagatgaaactctcacccaccct |
281 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30078509 |
aaaatttaatgcacactaactccctcattgagatttgaaacttgaatctctccacaaaaatccagtattaaatgctacagatgaaactctcacccaccct |
30078410 |
T |
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| Q |
282 |
ttacccctnnnnnnnnnnntgccatcctaacccccctaagtttctccctcatttt |
336 |
Q |
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|||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
30078409 |
ttacccctaaaaaaaaaaatgccatcctaacccccctaagtttctccctcatttt |
30078355 |
T |
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