View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7820_low_11 (Length: 294)

Name: NF7820_low_11
Description: NF7820
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7820_low_11
NF7820_low_11
[»] chr5 (38 HSPs)
chr5 (71-167)||(33037607-33037703)
chr5 (69-167)||(1671629-1671727)
chr5 (69-167)||(26791130-26791228)
chr5 (76-167)||(2972411-2972502)
chr5 (68-167)||(18258678-18258777)
chr5 (76-167)||(13168609-13168700)
chr5 (69-167)||(36739035-36739133)
chr5 (71-167)||(7287077-7287173)
chr5 (71-167)||(28306020-28306116)
chr5 (69-167)||(1274445-1274542)
chr5 (70-167)||(5168270-5168367)
chr5 (71-167)||(14923160-14923256)
chr5 (71-167)||(41321342-41321438)
chr5 (76-167)||(1764311-1764402)
chr5 (69-167)||(8686978-8687076)
chr5 (79-167)||(7076464-7076552)
chr5 (67-167)||(28467337-28467437)
chr5 (68-167)||(39591767-39591866)
chr5 (68-167)||(39592159-39592258)
chr5 (70-167)||(14051202-14051299)
chr5 (68-160)||(7552852-7552944)
chr5 (71-167)||(15479556-15479652)
chr5 (76-167)||(42175008-42175097)
chr5 (69-156)||(17626084-17626171)
chr5 (70-137)||(35634722-35634789)
chr5 (76-167)||(39054674-39054765)
chr5 (110-167)||(35646470-35646527)
chr5 (76-162)||(13309975-13310061)
chr5 (130-167)||(19521950-19521987)
chr5 (76-165)||(27546155-27546244)
chr5 (69-133)||(4088565-4088629)
chr5 (79-167)||(18660846-18660933)
chr5 (99-167)||(33958175-33958243)
chr5 (70-141)||(3565197-3565268)
chr5 (68-167)||(22972204-22972303)
chr5 (110-167)||(1079879-1079936)
chr5 (67-167)||(21943580-21943679)
chr5 (67-107)||(35646518-35646558)
[»] chr2 (43 HSPs)
chr2 (68-167)||(18254094-18254193)
chr2 (69-167)||(22888703-22888801)
chr2 (70-167)||(37737858-37737955)
chr2 (69-167)||(1248773-1248871)
chr2 (69-167)||(2076656-2076754)
chr2 (69-167)||(43487466-43487564)
chr2 (76-165)||(6049238-6049327)
chr2 (70-167)||(41195671-41195768)
chr2 (71-167)||(3838768-3838864)
chr2 (76-167)||(9207677-9207768)
chr2 (67-167)||(32477419-32477519)
chr2 (68-167)||(9647219-9647318)
chr2 (68-155)||(9760117-9760204)
chr2 (68-167)||(9990778-9990877)
chr2 (68-167)||(42421783-42421882)
chr2 (76-167)||(42091395-42091488)
chr2 (71-167)||(7698258-7698354)
chr2 (79-165)||(19633371-19633458)
chr2 (79-165)||(19830272-19830359)
chr2 (68-167)||(41042341-41042440)
chr2 (68-167)||(21611540-21611644)
chr2 (76-167)||(34944983-34945074)
chr2 (70-167)||(27490617-27490714)
chr2 (67-167)||(9194328-9194428)
chr2 (110-167)||(6511338-6511395)
chr2 (69-167)||(8848583-8848681)
chr2 (83-167)||(19108993-19109077)
chr2 (76-156)||(41056640-41056720)
chr2 (69-156)||(3097747-3097834)
chr2 (69-156)||(13333056-13333143)
chr2 (69-156)||(25270468-25270555)
chr2 (110-156)||(17388530-17388576)
chr2 (110-167)||(22416300-22416357)
chr2 (77-138)||(29349622-29349683)
chr2 (67-167)||(16973645-16973745)
chr2 (76-167)||(19642685-19642776)
chr2 (100-167)||(39147853-39147920)
chr2 (71-126)||(42434247-42434302)
chr2 (69-106)||(22416349-22416386)
chr2 (126-167)||(22445967-22446008)
chr2 (110-167)||(44287369-44287426)
chr2 (76-167)||(3412447-3412539)
chr2 (70-110)||(37085119-37085159)
[»] chr3 (53 HSPs)
chr3 (65-167)||(5114165-5114267)
chr3 (71-167)||(32924169-32924265)
chr3 (68-167)||(27541387-27541486)
chr3 (68-167)||(38926715-38926814)
chr3 (76-167)||(42358531-42358622)
chr3 (70-167)||(41309204-41309301)
chr3 (71-167)||(37503635-37503731)
chr3 (71-167)||(42356972-42357068)
chr3 (67-167)||(44856040-44856140)
chr3 (70-167)||(52939738-52939835)
chr3 (71-167)||(288813-288909)
chr3 (71-167)||(19149077-19149173)
chr3 (71-167)||(44413283-44413379)
chr3 (76-167)||(5244316-5244407)
chr3 (76-167)||(24256664-24256755)
chr3 (68-167)||(33939325-33939424)
chr3 (77-156)||(47472427-47472506)
chr3 (69-167)||(44813223-44813321)
chr3 (69-167)||(46623994-46624092)
chr3 (70-167)||(52254025-52254122)
chr3 (71-167)||(16969454-16969550)
chr3 (71-167)||(36670902-36670998)
chr3 (68-167)||(31157562-31157661)
chr3 (70-164)||(55151604-55151698)
chr3 (94-167)||(20547901-20547974)
chr3 (71-167)||(7934062-7934157)
chr3 (67-167)||(35597249-35597349)
chr3 (68-167)||(37302633-37302732)
chr3 (71-148)||(13735836-13735913)
chr3 (71-167)||(26014899-26014995)
chr3 (69-141)||(52326132-52326204)
chr3 (69-167)||(35376967-35377065)
chr3 (67-167)||(7668072-7668171)
chr3 (69-157)||(44383286-44383374)
chr3 (68-167)||(13348019-13348118)
chr3 (61-159)||(44445389-44445487)
chr3 (110-167)||(41505578-41505635)
chr3 (110-167)||(44413849-44413906)
chr3 (76-167)||(8847197-8847287)
chr3 (69-156)||(21217610-21217697)
chr3 (69-156)||(37056943-37057030)
chr3 (76-156)||(23592556-23592636)
chr3 (76-167)||(35201327-35201418)
chr3 (76-162)||(44463449-44463535)
chr3 (110-155)||(50318316-50318361)
chr3 (71-165)||(42889074-42889168)
chr3 (113-161)||(14226635-14226683)
chr3 (76-140)||(23600707-23600771)
chr3 (119-167)||(45000150-45000198)
chr3 (67-156)||(25641467-25641556)
chr3 (76-140)||(11630643-11630707)
chr3 (68-125)||(42478086-42478145)
chr3 (99-167)||(45711355-45711423)
[»] chr4 (56 HSPs)
chr4 (71-167)||(39440571-39440667)
chr4 (69-167)||(26492094-26492192)
chr4 (71-167)||(38376378-38376474)
chr4 (71-163)||(43175075-43175167)
chr4 (67-167)||(51986129-51986229)
chr4 (69-167)||(23369218-23369316)
chr4 (69-167)||(44539821-44539919)
chr4 (71-167)||(53801647-53801743)
chr4 (76-167)||(11068775-11068866)
chr4 (76-167)||(24575744-24575835)
chr4 (68-167)||(26732312-26732411)
chr4 (70-167)||(27965074-27965169)
chr4 (69-167)||(37297136-37297233)
chr4 (68-165)||(29175314-29175411)
chr4 (68-166)||(31641450-31641548)
chr4 (70-167)||(26724859-26724956)
chr4 (66-167)||(37997341-37997442)
chr4 (76-167)||(10250408-10250499)
chr4 (76-167)||(27050979-27051070)
chr4 (70-167)||(5622545-5622642)
chr4 (70-167)||(36177993-36178090)
chr4 (69-156)||(34616659-34616746)
chr4 (69-167)||(2575676-2575774)
chr4 (69-167)||(39478524-39478622)
chr4 (71-165)||(46213059-46213153)
chr4 (79-167)||(15175633-15175721)
chr4 (79-167)||(38134440-38134528)
chr4 (99-167)||(40348881-40348949)
chr4 (69-167)||(39195144-39195242)
chr4 (69-167)||(42853664-42853762)
chr4 (69-156)||(38382419-38382506)
chr4 (69-156)||(47181939-47182026)
chr4 (69-156)||(48402083-48402170)
chr4 (110-167)||(2268434-2268491)
chr4 (110-167)||(29531533-29531590)
chr4 (110-167)||(46634187-46634244)
chr4 (110-167)||(50608551-50608608)
chr4 (76-167)||(11672016-11672107)
chr4 (77-140)||(45083086-45083149)
chr4 (71-133)||(5233558-5233620)
chr4 (67-161)||(19473840-19473934)
chr4 (69-155)||(56363931-56364017)
chr4 (69-167)||(39654911-39655009)
chr4 (79-140)||(39606086-39606147)
chr4 (70-167)||(50831642-50831739)
chr4 (71-167)||(7632349-7632445)
chr4 (74-153)||(39447848-39447926)
chr4 (76-167)||(56474660-56474751)
chr4 (70-164)||(50721631-50721725)
chr4 (121-167)||(51255834-51255880)
chr4 (69-106)||(2268405-2268442)
chr4 (79-132)||(3316476-3316529)
chr4 (71-167)||(26907970-26908067)
chr4 (71-108)||(53786103-53786140)
chr4 (71-138)||(38510661-38510726)
chr4 (71-107)||(46634235-46634271)
[»] chr1 (57 HSPs)
chr1 (68-167)||(649856-649955)
chr1 (76-167)||(35369787-35369878)
chr1 (76-167)||(45333798-45333889)
chr1 (69-167)||(27464943-27465041)
chr1 (71-167)||(26469446-26469542)
chr1 (68-167)||(37274918-37275017)
chr1 (69-167)||(45121367-45121464)
chr1 (77-167)||(50932391-50932481)
chr1 (70-167)||(33100895-33100992)
chr1 (67-167)||(19055643-19055743)
chr1 (67-167)||(45640389-45640488)
chr1 (71-167)||(48470726-48470822)
chr1 (69-167)||(31088268-31088366)
chr1 (1-70)||(41982960-41983029)
chr1 (71-167)||(44914459-44914556)
chr1 (71-167)||(3981914-3982010)
chr1 (71-167)||(8350087-8350182)
chr1 (71-167)||(44519039-44519135)
chr1 (68-167)||(23645498-23645597)
chr1 (77-167)||(3851245-3851335)
chr1 (77-167)||(37619631-37619721)
chr1 (77-167)||(37685416-37685506)
chr1 (77-167)||(37700012-37700102)
chr1 (76-162)||(40861155-40861241)
chr1 (69-161)||(21401491-21401583)
chr1 (71-167)||(50726136-50726232)
chr1 (67-156)||(43775304-43775393)
chr1 (69-167)||(30467419-30467517)
chr1 (70-167)||(52576188-52576286)
chr1 (67-167)||(50149033-50149133)
chr1 (71-157)||(2571732-2571819)
chr1 (68-167)||(18434882-18434981)
chr1 (69-156)||(46907293-46907380)
chr1 (70-167)||(31827038-31827135)
chr1 (67-161)||(51718514-51718604)
chr1 (101-167)||(4776843-4776909)
chr1 (77-167)||(26020970-26021060)
chr1 (79-167)||(15082947-15083034)
chr1 (71-167)||(15469945-15470040)
chr1 (71-167)||(19947632-19947728)
chr1 (70-146)||(30735180-30735256)
chr1 (109-167)||(3159463-3159521)
chr1 (69-167)||(9566846-9566944)
chr1 (77-167)||(10627704-10627794)
chr1 (110-167)||(12657309-12657367)
chr1 (110-167)||(6693244-6693301)
chr1 (71-167)||(26207929-26208024)
chr1 (67-107)||(41677220-41677260)
chr1 (120-167)||(37985323-37985370)
chr1 (113-167)||(27533414-27533468)
chr1 (101-167)||(48261227-48261293)
chr1 (121-167)||(48858911-48858957)
chr1 (67-125)||(50333337-50333395)
chr1 (116-162)||(51436612-51436658)
chr1 (77-166)||(6809668-6809757)
chr1 (86-138)||(48103266-48103318)
chr1 (71-167)||(51571234-51571330)
[»] chr8 (30 HSPs)
chr8 (71-167)||(4054174-4054270)
chr8 (77-167)||(12898823-12898913)
chr8 (69-167)||(27325845-27325943)
chr8 (70-167)||(34186694-34186791)
chr8 (71-167)||(7271937-7272033)
chr8 (76-167)||(32501089-32501180)
chr8 (67-167)||(37449309-37449409)
chr8 (77-156)||(5277393-5277472)
chr8 (76-167)||(36816509-36816600)
chr8 (77-155)||(36251425-36251503)
chr8 (71-167)||(42768291-42768387)
chr8 (68-167)||(37133747-37133846)
chr8 (70-167)||(11253429-11253526)
chr8 (71-167)||(22719527-22719623)
chr8 (67-167)||(43397868-43397968)
chr8 (70-167)||(29025347-29025444)
chr8 (76-167)||(36660343-36660434)
chr8 (110-167)||(10731633-10731690)
chr8 (70-134)||(10692551-10692615)
chr8 (70-154)||(24479323-24479407)
chr8 (110-167)||(31249451-31249508)
chr8 (67-167)||(13106567-13106667)
chr8 (82-140)||(34084998-34085056)
chr8 (121-167)||(5600924-5600970)
chr8 (121-167)||(5639650-5639696)
chr8 (69-167)||(10839368-10839466)
chr8 (77-167)||(34639620-34639710)
chr8 (69-106)||(31249422-31249459)
chr8 (71-167)||(23754594-23754690)
chr8 (121-165)||(44061807-44061851)
[»] chr7 (30 HSPs)
chr7 (71-167)||(38956506-38956602)
chr7 (70-167)||(24614203-24614300)
chr7 (70-167)||(40112841-40112938)
chr7 (70-167)||(43025427-43025524)
chr7 (77-167)||(44895466-44895556)
chr7 (76-167)||(32529749-32529840)
chr7 (79-167)||(22918065-22918153)
chr7 (68-167)||(3937008-3937107)
chr7 (70-167)||(41189428-41189527)
chr7 (68-167)||(25192802-25192901)
chr7 (71-167)||(41989628-41989726)
chr7 (70-167)||(35072249-35072346)
chr7 (71-167)||(40417861-40417957)
chr7 (96-167)||(44189223-44189294)
chr7 (69-156)||(46022153-46022240)
chr7 (71-167)||(45851095-45851188)
chr7 (70-167)||(31445405-31445502)
chr7 (70-167)||(35098590-35098687)
chr7 (68-141)||(43942745-43942818)
chr7 (79-167)||(46578031-46578119)
chr7 (69-156)||(7701642-7701729)
chr7 (76-167)||(47391218-47391309)
chr7 (110-167)||(38073307-38073364)
chr7 (89-167)||(41863535-41863613)
chr7 (69-167)||(48062144-48062242)
chr7 (110-167)||(38861183-38861240)
chr7 (70-167)||(41018751-41018848)
chr7 (77-167)||(12007079-12007169)
chr7 (114-167)||(22925215-22925268)
chr7 (77-133)||(3614340-3614396)
[»] chr6 (27 HSPs)
chr6 (71-167)||(552880-552976)
chr6 (70-167)||(32316815-32316912)
chr6 (68-167)||(15974695-15974794)
chr6 (68-163)||(33430247-33430342)
chr6 (70-167)||(1156807-1156904)
chr6 (71-167)||(14818019-14818115)
chr6 (68-167)||(34047474-34047573)
chr6 (71-167)||(13689882-13689978)
chr6 (71-167)||(31077881-31077977)
chr6 (76-167)||(18737460-18737551)
chr6 (68-167)||(26595436-26595535)
chr6 (69-167)||(4820454-4820552)
chr6 (71-167)||(5694039-5694135)
chr6 (71-167)||(22079451-22079547)
chr6 (100-167)||(277078-277145)
chr6 (76-167)||(11612275-11612366)
chr6 (69-156)||(16199548-16199635)
chr6 (82-167)||(3853206-3853291)
chr6 (71-167)||(33603168-33603264)
chr6 (76-167)||(30423445-30423536)
chr6 (100-150)||(5570255-5570305)
chr6 (110-167)||(5080494-5080551)
chr6 (110-167)||(8098524-8098581)
chr6 (83-167)||(11014890-11014974)
chr6 (68-167)||(24900861-24900960)
chr6 (69-167)||(31883189-31883287)
chr6 (71-167)||(17551267-17551362)
[»] scaffold0056 (1 HSPs)
scaffold0056 (68-167)||(76504-76603)
[»] scaffold0199 (1 HSPs)
scaffold0199 (67-165)||(8757-8855)
[»] scaffold0098 (1 HSPs)
scaffold0098 (77-161)||(49388-49472)
[»] scaffold0519 (1 HSPs)
scaffold0519 (70-167)||(11869-11966)
[»] scaffold0067 (1 HSPs)
scaffold0067 (110-167)||(35610-35667)
[»] scaffold0041 (1 HSPs)
scaffold0041 (110-161)||(10890-10941)
[»] scaffold0087 (1 HSPs)
scaffold0087 (71-156)||(53249-53334)


Alignment Details
Target: chr5 (Bit Score: 77; Significance: 9e-36; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 71 - 167
Target Start/End: Complemental strand, 33037703 - 33037607
Alignment:
Q  71 gagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||| |||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  33037703 gagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtgacacaaaaatcaaagcaata 33037607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 69 - 167
Target Start/End: Complemental strand, 1671727 - 1671629
Alignment:
Q  69 aagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| || ||||||||||| |||| |||||    
T  1671727 aagagttgtgttatttgaacatccatatatgtgacaacttttgtgacaatcaaaattttacaaaggaaatgaggtactgacacaaaaaccaaaacaata 1671629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 69 - 167
Target Start/End: Original strand, 26791130 - 26791228
Alignment:
Q  69 aagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||| |||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||| ||||| |||||||| ||||||||||    
T  26791130 aagagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgagttagtggcacaaaaaccaaagcaata 26791228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 76 - 167
Target Start/End: Complemental strand, 2972502 - 2972411
Alignment:
Q  76 gtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||||| || ||||||||||| || ||||||||||||||||||||||    
T  2972502 gtgttatttgaacatttatatatgtgacaacttttgtgacaatcaaaatttcacgaaggaaatgaggtattgacacaaaaatcaaagcaata 2972411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 68 - 167
Target Start/End: Original strand, 18258678 - 18258777
Alignment:
Q  68 aaagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||||| |||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||| ||||| |||||||| ||||| ||||    
T  18258678 aaagagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaaccaaagaaata 18258777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 76 - 167
Target Start/End: Complemental strand, 13168700 - 13168609
Alignment:
Q  76 gtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||||||| |||||  |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||    
T  13168700 gtgttatttcaacattcatatatgtgacaacttttgtgacaatcaaaattttacaaaggaaatgagatagtggcacaaaaaccaaagtaata 13168609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 69 - 167
Target Start/End: Complemental strand, 36739133 - 36739035
Alignment:
Q  69 aagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||| |||||||||||||||| |||||||||| || || |||||||| |||||||||||||| |||||||| |||||||||||||| ||||||||||    
T  36739133 aagagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaaagaaatgaggtagtgacacaaaaaccaaagcaata 36739035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 71 - 167
Target Start/End: Original strand, 7287077 - 7287173
Alignment:
Q  71 gagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||| |||||||||||||||  |||||||||||||||| |||||||| ||||||||||||||| ||||||| |||||||||||||| |||| |||||    
T  7287077 gagttgtgttatttgaacattcatatatgtgacaacttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaaccaaaacaata 7287173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 71 - 167
Target Start/End: Original strand, 28306020 - 28306116
Alignment:
Q  71 gagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||| |||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||| ||||||| ||||| |||||| | ||||||||||    
T  28306020 gagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaagaaaatgaggtagtggcacaaagaccaaagcaata 28306116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 69 - 167
Target Start/End: Complemental strand, 1274542 - 1274445
Alignment:
Q  69 aagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||| |||||||||||||||| |||||||||||||||| | || ||| |||||||||||||||| ||||||||| ||||||||||| ||||||||||    
T  1274542 aagagttgtgttatttgaacatccatatatgtgacaacttttatg-caaccaaaattttacaaagggaatgagatattgacacaaaaaccaaagcaata 1274445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 70 - 167
Target Start/End: Complemental strand, 5168367 - 5168270
Alignment:
Q  70 agagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||| |||||||||||||||  |||||| ||||||||| ||||||||  |||||||||||||| ||||||| ||||| |||||||||||||||||||    
T  5168367 agagttgtgttatttgaacattcatatatatgacaacttttgtgacaactaaaattttacaaagaaaatgaggtagtggcacaaaaatcaaagcaata 5168270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 71 - 167
Target Start/End: Complemental strand, 14923256 - 14923160
Alignment:
Q  71 gagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||| |||||||||||||||| ||||||||||||||||  |||| || |||||||||||||| |||||||| ||||| |||||||| ||||||||||    
T  14923256 gagttgtgttatttgaacatcgatatatgtgacaactttcgtgaaaaccaaaattttacaaaagaaatgaggtagtggcacaaaaaccaaagcaata 14923160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 71 - 167
Target Start/End: Complemental strand, 41321438 - 41321342
Alignment:
Q  71 gagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||| |||||||||||| ||| ||||||||||||| || |||||||| ||||||||||||||||||||||| || ||||||||||| ||||| ||||    
T  41321438 gagttgtgttatttgaatatccatatatgtgacaatttttgtgacaaccaaaattttacaaaggaaatgaggtattgacacaaaaaccaaagtaata 41321342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 76 - 167
Target Start/End: Complemental strand, 1764402 - 1764311
Alignment:
Q  76 gtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||||||||||||  |||||||||||||||| |||||||| |||||||||| |||||||||||| ||||| || ||||| ||||||||||    
T  1764402 gtgttatttgaacattcatatatgtgacaacttttgtgacaaccaaaattttagaaaggaaatgaggtagtggcataaaaaccaaagcaata 1764311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 69 - 167
Target Start/End: Complemental strand, 8687076 - 8686978
Alignment:
Q  69 aagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||| |||||||||||||||  |||||||||||||||| | | |||||||||||||||||||| ||||||| || ||||||||||| |||| |||||    
T  8687076 aagagtagtgttatttgaacattcatatatgtgacaacttttataacaatcaaaattttacaaagaaaatgaggtattgacacaaaaaccaaaacaata 8686978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 79 - 167
Target Start/End: Original strand, 7076464 - 7076552
Alignment:
Q  79 ttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||||||||||  |||||||||||||||| |||||||| ||||||||||||||||||||||  || || |||||||| ||||||||||    
T  7076464 ttatttgaacattcatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaagtaatggcacaaaaaccaaagcaata 7076552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 67 - 167
Target Start/End: Original strand, 28467337 - 28467437
Alignment:
Q  67 aaaagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaat 166  Q
    |||||||| ||||||| |||||||  ||||||||||||| || |||||||| |||||||||| ||||||||||||  ||||||||||||| |||| ||||    
T  28467337 aaaagagttgtgttatctgaacattcatatatgtgacaatttttgtgacaaccaaaattttataaaggaaatgaggcagtgacacaaaaaccaaaacaat 28467436  T
Q  167 a 167  Q
    |    
T  28467437 a 28467437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 68 - 167
Target Start/End: Complemental strand, 39591866 - 39591767
Alignment:
Q  68 aaagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||||| ||||||||||||||||||| ||| ||||||| | |||||||| |||| |||||||||| |||||||| | ||||||| ||| ||||||||||    
T  39591866 aaagagttgtgttatttgaacatctatttatatgacaacctttgtgacaaccaaagttttacaaagaaaatgagagattgacacacaaaccaaagcaata 39591767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 68 - 167
Target Start/End: Complemental strand, 39592258 - 39592159
Alignment:
Q  68 aaagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||||| ||||||||||||||||||| ||| ||||||| | |||||||| |||| |||||||||| |||||||| | ||||||| ||| ||||||||||    
T  39592258 aaagagttgtgttatttgaacatctatttatatgacaacctttgtgacaaccaaagttttacaaagaaaatgagagattgacacacaaaccaaagcaata 39592159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 70 - 167
Target Start/End: Original strand, 14051202 - 14051299
Alignment:
Q  70 agagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||| ||||||||  |||||| |||||||||| ||||| |||||||| ||||||||||||||| ||||||| ||||| |||||||| |||| |||||    
T  14051202 agagttgtgttattcaaacatccatatatgtgataacttttgtgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaaacaata 14051299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 68 - 160
Target Start/End: Original strand, 7552852 - 7552944
Alignment:
Q  68 aaagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaa 160  Q
    ||||||| |||||||||||||||| || ||  ||||||||| |||||||| ||||||||| ||||| ||||||  || |||||||||||||||    
T  7552852 aaagagttgtgttatttgaacatccatttagatgacaacttttgtgacaaccaaaattttgcaaagaaaatgatgtattgacacaaaaatcaa 7552944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 71 - 167
Target Start/End: Complemental strand, 15479652 - 15479556
Alignment:
Q  71 gagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||| |||||||||||||||| ||| |||||||||||| ||||||||| |||||||||||||  ||||||| || ||||| || || |||| |||||    
T  15479652 gagttgtgttatttgaacatccataaatgtgacaacttttgtgacaattaaaattttacaaaaaaaatgaggtattgacaaaataaccaaaacaata 15479556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 76 - 167
Target Start/End: Complemental strand, 42175097 - 42175008
Alignment:
Q  76 gtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||||||||||||| ||||||||| |||||| | ||||| ||||||||||| |||||||||  | |||||||||||| ||||||| ||||    
T  42175097 gtgttatttgaacatcgatatatgtgtcaacttttatgacagtcaaaattttataaaggaaat--ggtagtgacacaaagatcaaaggaata 42175008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 17626171 - 17626084
Alignment:
Q  69 aagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaa 156  Q
    |||||| |||||||||||||||| || ||| ||||||||| || ||||| |||||||||| |||| ||||||| || |||||||||||    
T  17626171 aagagttgtgttatttgaacatccatttatatgacaacttttgagacaaccaaaattttataaagaaaatgaggtattgacacaaaaa 17626084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 70 - 137
Target Start/End: Original strand, 35634722 - 35634789
Alignment:
Q  70 agagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaa 137  Q
    ||||| |||||||||||||||| |||||||||||||||| | ||| || |||||||||||||||||||    
T  35634722 agagttgtgttatttgaacatccatatatgtgacaacttttatgataaccaaaattttacaaaggaaa 35634789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 76 - 167
Target Start/End: Complemental strand, 39054765 - 39054674
Alignment:
Q  76 gtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||||||||||||| || ||  ||||||||| ||||| |||||||||||| ||||| |||||| ||| |  |||||||||||||||||||    
T  39054765 gtgttatttgaacatccatttagatgacaacttttgtgataatcaaaattttgcaaagaaaatgatatatttgcacaaaaatcaaagcaata 39054674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 110 - 167
Target Start/End: Complemental strand, 35646527 - 35646470
Alignment:
Q  110 tgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||||||  |||||||||||||||||||||| |||||||||||||| ||||||||||    
T  35646527 tgtgacaactaaaattttacaaaggaaatgaggtagtgacacaaaaaccaaagcaata 35646470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 162
Target Start/End: Complemental strand, 13310061 - 13309975
Alignment:
Q  76 gtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaag 162  Q
    |||||||||||||||| || ||  |||||| || || |||||||||| |||||||||| ||||||| || | ||||||||| |||||    
T  13310061 gtgttatttgaacatccatttagatgacaatttttgagacaatcaaatttttacaaagaaaatgaggtattaacacaaaaaccaaag 13309975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 130 - 167
Target Start/End: Original strand, 19521950 - 19521987
Alignment:
Q  130 aaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||||||||| |||||||||||||||||||||||||    
T  19521950 aaaggaaatgaggtagtgacacaaaaatcaaagcaata 19521987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 76 - 165
Target Start/End: Complemental strand, 27546244 - 27546155
Alignment:
Q  76 gtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaa 165  Q
    |||||||||||| | |||| | ||||||||||| || |||||||| || | ||||||| |||  ||||| ||||| ||||||||||||||    
T  27546244 gtgttatttgaataactatttgtgtgacaacttttgagacaatcataaatgtacaaagaaaaatagatattgacataaaaatcaaagcaa 27546155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 133
Target Start/End: Complemental strand, 4088629 - 4088565
Alignment:
Q  69 aagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaag 133  Q
    |||||| ||||||||||||||||||| | | ||||||| | ||||||||||| | ||||||||||    
T  4088629 aagagttgtgttatttgaacatctatttttttgacaacctatgtgacaatcatatttttacaaag 4088565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 167
Target Start/End: Complemental strand, 18660933 - 18660846
Alignment:
Q  79 ttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||| ||||||  |||||||| | ||||| ||| ||||||||| |||||||||||||||||  || || |||||||| ||||||||||    
T  18660933 ttattcgaacattcatatatgtcataacttttgt-acaatcaaacttttacaaaggaaatgaagtattggcacaaaaaccaaagcaata 18660846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 167
Target Start/End: Original strand, 33958175 - 33958243
Alignment:
Q  99 gtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||||||| | |||||| || || ||||||||| ||| |||||| ||||||||||| ||||||||||    
T  33958175 gtgacaacttttatgacaaccataaatttacaaagaaaaagagatattgacacaaaaaccaaagcaata 33958243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 141
Target Start/End: Complemental strand, 3565268 - 3565197
Alignment:
Q  70 agagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgag 141  Q
    ||||| |||||||||||||||| |  |  |||||||||| || ||||| ||||||||||||||| |||||||    
T  3565268 agagttgtgttatttgaacatccacttgagtgacaacttttgagacaaccaaaattttacaaagaaaatgag 3565197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 68 - 167
Target Start/End: Complemental strand, 22972303 - 22972204
Alignment:
Q  68 aaagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||||| |||||||||||||||| || ||| | ||||||| || |||||  |||||||||||||| |||| || || | | ||||||| |||| |||||    
T  22972303 aaagagttgtgttatttgaacatccatttatataacaacttttgagacaactaaaattttacaaagaaaataaggtattaatacaaaaaccaaaacaata 22972204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 167
Target Start/End: Original strand, 1079879 - 1079936
Alignment:
Q  110 tgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||||||| |||||||||||||| ||||||| || || |||||||  ||||||||||    
T  1079879 tgtgacaattaaaattttacaaagaaaatgaggtattggcacaaaatccaaagcaata 1079936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 167
Target Start/End: Original strand, 21943580 - 21943679
Alignment:
Q  67 aaaagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaat 166  Q
    |||||||| ||||||||| |||| |||| |   |||||||||   |||||| || ||||| |||||| |||| ||||| ||||| |||||||||||||||    
T  21943580 aaaagagttgtgttatttaaacaactattttaatgacaacttacatgacaaccataattt-acaaagaaaataagatattgacagaaaaatcaaagcaat 21943678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 107
Target Start/End: Complemental strand, 35646558 - 35646518
Alignment:
Q  67 aaaagagtcgtgttatttgaacatctatatatgtgacaact 107  Q
    |||||||| ||||||||| |||||| |||||||||||||||    
T  35646558 aaaagagttgtgttatttaaacatccatatatgtgacaact 35646518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 76; Significance: 4e-35; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 68 - 167
Target Start/End: Original strand, 18254094 - 18254193
Alignment:
Q  68 aaagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||||| |||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  18254094 aaagagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgagatagtggcacaaaaaccaaagcaata 18254193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 69 - 167
Target Start/End: Original strand, 22888703 - 22888801
Alignment:
Q  69 aagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| || || |||||||| ||||||||||    
T  22888703 aagagttgtgttatttgaacatccatatatgtgacaacttttgtgacaatcaaaattttacaaaggaaatgaggtattggcacaaaaaccaaagcaata 22888801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 70 - 167
Target Start/End: Original strand, 37737858 - 37737955
Alignment:
Q  70 agagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||| ||||||||||||| || |||||||||||||||| |||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  37737858 agagttgtgttatttgaacgtccatatatgtgacaacttttgtgacaaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaagcaata 37737955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 69 - 167
Target Start/End: Complemental strand, 1248871 - 1248773
Alignment:
Q  69 aagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||| |||||||||||||||| |||||||||||||||| ||||| ||| |||||||||||||||||||||| ||||| |||||||| ||||||||||    
T  1248871 aagagttgtgttatttgaacatccatatatgtgacaacttttgtgataattaaaattttacaaaggaaatgaggtagtggcacaaaaaccaaagcaata 1248773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 69 - 167
Target Start/End: Complemental strand, 2076754 - 2076656
Alignment:
Q  69 aagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||| |||||||||||||||| ||| |||||||||||| |||||||| ||||||||||||||| ||||||| || ||||||||||||||||||||||    
T  2076754 aagagttgtgttatttgaacatcaatagatgtgacaacttttgtgacaaccaaaattttacaaagaaaatgaggtattgacacaaaaatcaaagcaata 2076656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 69 - 167
Target Start/End: Complemental strand, 43487564 - 43487466
Alignment:
Q  69 aagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||| |||||||||||||||| ||||||||||||| || ||| |||| ||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  43487564 aagagttgtgttatttgaacatccatatatgtgacaatttttgtaacaaccaaaattttacaaaggaaatgaggtagtgacacaaaaaccaaagcaata 43487466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 76 - 165
Target Start/End: Original strand, 6049238 - 6049327
Alignment:
Q  76 gtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaa 165  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| || || |||||||| ||||||||    
T  6049238 gtgttatttgaacatccatatatgtgacaacttttgtgacaatcaaaattttacaaaggaaatgaggtattggcacaaaaaccaaagcaa 6049327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 70 - 167
Target Start/End: Complemental strand, 41195768 - 41195671
Alignment:
Q  70 agagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||| |||||||||||||||  |||||||| ||||||| |||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  41195768 agagttgtgttatttgaacattcatatatgtaacaacttttgtgacaaccaaaattttacaaaggaaatgagatattgacacaaaaaccaaagcaata 41195671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 71 - 167
Target Start/End: Original strand, 3838768 - 3838864
Alignment:
Q  71 gagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||| ||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||||||||||||   |||||||||||||||||| |||||    
T  3838768 gagttgtgttatttgaacatctatatatgtgacaacttttgtgataattaaaattttacaaaggaaatgaagcagtgacacaaaaatcaaaacaata 3838864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 76 - 167
Target Start/End: Complemental strand, 9207768 - 9207677
Alignment:
Q  76 gtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||||||||||||||||||||||||| || || |||||||| ||||||||||||||||||||||| ||||| |||||||| ||||||||||    
T  9207768 gtgttatttgaacatctatatatgtgataatttttgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaaccaaagcaata 9207677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 67 - 167
Target Start/End: Complemental strand, 32477519 - 32477419
Alignment:
Q  67 aaaagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaat 166  Q
    |||||||| |||||||||||||||  |||||||||||||||| |||||||| |||||||| |||||||||||||| || | | |||||||||||||||||    
T  32477519 aaaagagttgtgttatttgaacattcatatatgtgacaacttttgtgacaaccaaaatttgacaaaggaaatgaggtattcatacaaaaatcaaagcaat 32477420  T
Q  167 a 167  Q
    |    
T  32477419 a 32477419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 68 - 167
Target Start/End: Complemental strand, 9647318 - 9647219
Alignment:
Q  68 aaagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||||| |||||||||||||||  ||||||| || ||||| |||||||| ||||||||||||||||||||||  |||||||||||||| ||||||||||    
T  9647318 aaagagttgtgttatttgaacattcatatatgcgataacttttgtgacaaccaaaattttacaaaggaaatgaagtagtgacacaaaaaccaaagcaata 9647219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 68 - 155
Target Start/End: Complemental strand, 9760204 - 9760117
Alignment:
Q  68 aaagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaa 155  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||| | ||||||||||| ||||| |||||||    
T  9760204 aaagagttgtgttatttgaacatctatatatgtgacaacttttgtgacaaccaaaatttttccaaggaaatgaggtagtggcacaaaa 9760117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 68 - 167
Target Start/End: Complemental strand, 9990877 - 9990778
Alignment:
Q  68 aaagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||||| |||||||||||||||| |||||||||| ||||| ||||||||| |||||||||||||||||||||  |||||  ||||||| ||||||||||    
T  9990877 aaagagttgtgttatttgaacatccatatatgtgataacttttgtgacaattaaaattttacaaaggaaatgaagtagtggtacaaaaaccaaagcaata 9990778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 68 - 167
Target Start/End: Original strand, 42421783 - 42421882
Alignment:
Q  68 aaagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||||| |||||||||||||||  |||||||||||||||| |||||||| |||||||||| |||||||||||| ||||| |||||| | ||||||||||    
T  42421783 aaagagttgtgttatttgaacattcatatatgtgacaacttttgtgacaaccaaaattttagaaaggaaatgaggtagtggcacaaacaccaaagcaata 42421882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 76 - 167
Target Start/End: Original strand, 42091395 - 42091488
Alignment:
Q  76 gtgttatttgaacatctata--tatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||||||||||||||||||  |||||||||| || |||||||| ||||||||||||||||||| ||| |||||||||||||| ||||||||||    
T  42091395 gtgttatttgaacatctatatatatgtgacaatttttgtgacaaccaaaattttacaaaggaaacgaggtagtgacacaaaaaccaaagcaata 42091488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 71 - 167
Target Start/End: Complemental strand, 7698354 - 7698258
Alignment:
Q  71 gagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||| |||||||| ||||||||||| |||||| ||||| ||||| ||| ||||||||||||||||||| || ||||| |||||||||||||||||||    
T  7698354 gagttgtgttattagaacatctatacatgtgataacttttgtgataattaaaattttacaaaggaaattaggtagtggcacaaaaatcaaagcaata 7698258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 79 - 165
Target Start/End: Complemental strand, 19633458 - 19633371
Alignment:
Q  79 ttatttgaacatctatatatgt-gacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaa 165  Q
    |||||||||||| ||||||||| || ||||| |||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||    
T  19633458 ttatttgaacatttatatatgttgataacttttgtgacaatcaaaattttacaaaggaaatgaggtagtgatacaaaaaccaaagcaa 19633371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 79 - 165
Target Start/End: Complemental strand, 19830359 - 19830272
Alignment:
Q  79 ttatttgaacatctatatatgt-gacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaa 165  Q
    |||||||||||| ||||||||| || ||||| |||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||    
T  19830359 ttatttgaacatttatatatgttgataacttttgtgacaatcaaaattttacaaaggaaatgaggtagtgatacaaaaaccaaagcaa 19830272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 68 - 167
Target Start/End: Complemental strand, 41042440 - 41042341
Alignment:
Q  68 aaagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||||  ||||||||||||||| ||||||||||||| || | |||||| |||||||||| ||||||||||||||| ||||| ||||| ||||||||||    
T  41042440 aaagagttctgttatttgaacatccatatatgtgacaatttttatgacaaccaaaattttataaaggaaatgagatattgacataaaaaccaaagcaata 41042341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 68 - 167
Target Start/End: Original strand, 21611540 - 21611644
Alignment:
Q  68 aaagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaa-----tgagatagtgacacaaaaatcaaag 162  Q
    ||||||| |||||||||||||||| |||||||||||||||| | |||||| |||||||||||||| ||||     |||| ||||| ||||||||||||||    
T  21611540 aaagagttgtgttatttgaacatccatatatgtgacaacttttatgacaaccaaaattttacaaatgaaataaggtgaggtagtggcacaaaaatcaaag 21611639  T
Q  163 caata 167  Q
    |||||    
T  21611640 caata 21611644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 76 - 167
Target Start/End: Original strand, 34944983 - 34945074
Alignment:
Q  76 gtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||| ||||| ||  ||||||||||||||||  ||||||| |||||||||||||| |||||||| ||||| |||||||||||||||||||    
T  34944983 gtgttaattgaatattcatatatgtgacaactttcgtgacaaccaaaattttacaaaagaaatgaggtagtggcacaaaaatcaaagcaata 34945074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 70 - 167
Target Start/End: Original strand, 27490617 - 27490714
Alignment:
Q  70 agagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||| |||||||||||||||| || |   ||||||||| |||||||||||||||||||||||| ||||||  || | ||||||||||||||||||||    
T  27490617 agagttgtgttatttgaacatccattttgatgacaacttttgtgacaatcaaaattttacaaagaaaatgatgtattaacacaaaaatcaaagcaata 27490714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 67 - 167
Target Start/End: Complemental strand, 9194428 - 9194328
Alignment:
Q  67 aaaagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaat 166  Q
    |||||||| |||||||||||||||  |||||||| |||| || |||||||| |||||||||||||| |||||||| || || |||||||| |||| ||||    
T  9194428 aaaagagttgtgttatttgaacattcatatatgtaacaatttttgtgacaaccaaaattttacaaaagaaatgaggtaatggcacaaaaaccaaaacaat 9194329  T
Q  167 a 167  Q
    |    
T  9194328 a 9194328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 110 - 167
Target Start/End: Complemental strand, 6511395 - 6511338
Alignment:
Q  110 tgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||    
T  6511395 tgtgacaatcaaaattttataaaggaaatgaggtagtgacacaaaaaccaaagcaata 6511338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 167
Target Start/End: Original strand, 8848583 - 8848681
Alignment:
Q  69 aagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||| ||||||||||||||||||| ||  ||| || || |||||||||||||||||| ||||| ||||||  || ||  ||||||||||||||||||    
T  8848583 aagagttgtgttatttgaacatctatttagatgataatttttgtgacaatcaaaattttgcaaagaaaatgatgtattggtacaaaaatcaaagcaata 8848681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 83 - 167
Target Start/End: Original strand, 19108993 - 19109077
Alignment:
Q  83 ttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||||||  |||||||||||||||| ||||||||  ||  |||| ||||||||||||  ||||| |||||||||||||||||||    
T  19108993 ttgaacattcatatatgtgacaacttttgtgacaacaaattttttgcaaaggaaatgaagtagtggcacaaaaatcaaagcaata 19109077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 76 - 156
Target Start/End: Original strand, 41056640 - 41056720
Alignment:
Q  76 gtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaa 156  Q
    |||||||||||||||| || ||| ||||||||| || ||||| |||||||||| |||| ||||||| || |||||||||||    
T  41056640 gtgttatttgaacatccatttatatgacaacttttgagacaaccaaaattttataaagaaaatgaggtattgacacaaaaa 41056720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 69 - 156
Target Start/End: Original strand, 3097747 - 3097834
Alignment:
Q  69 aagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaa 156  Q
    |||||| |||||||||||||||| || ||| ||||||||| || ||||| |||||||||| |||| ||||||| || | |||||||||    
T  3097747 aagagttgtgttatttgaacatccatttatatgacaacttttgagacaaccaaaattttataaagaaaatgagttatttacacaaaaa 3097834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 69 - 156
Target Start/End: Original strand, 13333056 - 13333143
Alignment:
Q  69 aagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaa 156  Q
    |||||| |||||||||||||||| || ||| ||||||||| || ||||| |||||||||| |||| ||||||  || |||||||||||    
T  13333056 aagagttgtgttatttgaacatcgatttatatgacaacttttgagacaaccaaaattttataaagaaaatgatgtattgacacaaaaa 13333143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 69 - 156
Target Start/End: Original strand, 25270468 - 25270555
Alignment:
Q  69 aagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaa 156  Q
    |||||| |||||||||||||||| || ||| |||||||||  | ||||| |||||||||| |||| ||||||| || |||||||||||    
T  25270468 aagagttgtgttatttgaacatccatttatatgacaactttcgagacaaccaaaattttataaagaaaatgaggtattgacacaaaaa 25270555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 110 - 156
Target Start/End: Original strand, 17388530 - 17388576
Alignment:
Q  110 tgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaa 156  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||||    
T  17388530 tgtgacaatcaaaattttacaaaggaaatgaggtagtggcacaaaaa 17388576  T

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Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 167
Target Start/End: Complemental strand, 22416357 - 22416300
Alignment:
Q  110 tgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||||| ||||||||||||||| |||||||  |||| |||||||| ||||||||||    
T  22416357 tgtgacaaccaaaattttacaaagaaaatgaggcagtggcacaaaaaccaaagcaata 22416300  T

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Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 77 - 138
Target Start/End: Complemental strand, 29349683 - 29349622
Alignment:
Q  77 tgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaat 138  Q
    |||||||| |||||| || ||  ||||||||| |||||||||||||||||||||||| ||||    
T  29349683 tgttatttcaacatccatttagatgacaacttttgtgacaatcaaaattttacaaagaaaat 29349622  T

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Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 167
Target Start/End: Original strand, 16973645 - 16973745
Alignment:
Q  67 aaaagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaat 166  Q
    ||||||||  |||||||| ||||||||| |||  |||||||  ||  |||| ||||||||||||||  |||||||| | |||| |||||||||||| |||    
T  16973645 aaaagagttttgttatttaaacatctatttattggacaactattgatacaaccaaaattttacaaataaaatgagaaattgacccaaaaatcaaagtaat 16973744  T
Q  167 a 167  Q
    |    
T  16973745 a 16973745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 76 - 167
Target Start/End: Complemental strand, 19642776 - 19642685
Alignment:
Q  76 gtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||||||| |||||| || ||| ||| ||||| || ||||| || |||||| ||||| ||||||   | ||||||||||||||||||||||    
T  19642776 gtgttatttaaacatccatttatatgagaacttttgagacaaccacaattttgcaaagaaaatgaagcattgacacaaaaatcaaagcaata 19642685  T

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Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 100 - 167
Target Start/End: Complemental strand, 39147920 - 39147853
Alignment:
Q  100 tgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||||||| || |||||||| || ||||||||  ||||||| || |||||||||||||||| |||||    
T  39147920 tgacaacttttgggacaatcataaatttacaaaaaaaatgaggtattgacacaaaaatcaaaacaata 39147853  T

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Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 42434302 - 42434247
Alignment:
Q  71 gagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattt 126  Q
    |||| ||||||||||||||||||| ||| ||||||||| || ||| ||||||||||    
T  42434302 gagttgtgttatttgaacatctatttatatgacaacttttgagacgatcaaaattt 42434247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 106
Target Start/End: Complemental strand, 22416386 - 22416349
Alignment:
Q  69 aagagtcgtgttatttgaacatctatatatgtgacaac 106  Q
    |||||| |||||||||||||||| ||||||||||||||    
T  22416386 aagagttgtgttatttgaacatccatatatgtgacaac 22416349  T

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Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 167
Target Start/End: Original strand, 22445967 - 22446008
Alignment:
Q  126 ttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||||||||||||| || |||||||||||| |||||||||    
T  22445967 ttacaaaggaaatgaggtattgacacaaaaattaaagcaata 22446008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 167
Target Start/End: Original strand, 44287369 - 44287426
Alignment:
Q  110 tgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||||| ||||||||||||||||||||||| | ||| ||||| || |||| |||||    
T  44287369 tgtgacaaccaaaattttacaaaggaaatgaggttgtggcacaataaccaaaacaata 44287426  T

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Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 167
Target Start/End: Original strand, 3412447 - 3412539
Alignment:
Q  76 gtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacac-aaaaatcaaagcaata 167  Q
    ||||| |||||||| |||| ||||||||||||| ||  |||| || || ||||||||| |||  ||||| || ||| ||||||||||||||||    
T  3412447 gtgttgtttgaacaactatttatgtgacaacttttgaaacaaccataaatttacaaagaaaagtagatattgccacaaaaaatcaaagcaata 3412539  T

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Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 110
Target Start/End: Original strand, 37085119 - 37085159
Alignment:
Q  70 agagtcgtgttatttgaacatctatatatgtgacaacttct 110  Q
    ||||| ||| |||||||||| ||||||||||||||||||||    
T  37085119 agagtagtgatatttgaacaactatatatgtgacaacttct 37085159  T

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Target: chr3 (Bit Score: 75; Significance: 1e-34; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 65 - 167
Target Start/End: Complemental strand, 5114267 - 5114165
Alignment:
Q  65 tgaaaagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagca 164  Q
    |||||||||| ||||||||||||||||||| |||||||||| || | |||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  5114267 tgaaaagagttgtgttatttgaacatctatttatgtgacaatttttatgacaatcaaaattttacaaagaaaatgaggtagtgacacaaaaatcaaagca 5114168  T
Q  165 ata 167  Q
    |||    
T  5114167 ata 5114165  T

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Target: chr3; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 71 - 167
Target Start/End: Original strand, 32924169 - 32924265
Alignment:
Q  71 gagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||| |||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  32924169 gagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtgacacaaaaaccaaagcaata 32924265  T

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Target: chr3; HSP #3
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 68 - 167
Target Start/End: Original strand, 27541387 - 27541486
Alignment:
Q  68 aaagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||||| |||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||| ||||| |||||||| ||||||||||    
T  27541387 aaagagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaaccaaagcaata 27541486  T

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Target: chr3; HSP #4
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 68 - 167
Target Start/End: Complemental strand, 38926814 - 38926715
Alignment:
Q  68 aaagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||||| |||||||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||| || |||||||||||||| ||||||||||    
T  38926814 aaagagttgtgttatttgaacatctatatatgtgacaactttcgtgacaaccaaaattttacaaaggaaataaggtagtgacacaaaaaccaaagcaata 38926715  T

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Target: chr3; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 76 - 167
Target Start/End: Original strand, 42358531 - 42358622
Alignment:
Q  76 gtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||    
T  42358531 gtgttatttgaacatccatatatgtgacaacttttgtgacaatcaaaattttgcaaaggaaatgaggtattgacacaaaaatcaaagcaata 42358622  T

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Target: chr3; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 70 - 167
Target Start/End: Complemental strand, 41309301 - 41309204
Alignment:
Q  70 agagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||| |||||||||||||||| ||||||| || ||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  41309301 agagttgtgttatttgaacatccatatatgcgataacttttgtgacaatcaaaattttacaaagaaaatgaggtagtgacacaaaaatcaaagcaata 41309204  T

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Target: chr3; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 71 - 167
Target Start/End: Original strand, 37503635 - 37503731
Alignment:
Q  71 gagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||| ||||||||||||||| ||||||||||| ||||| |||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  37503635 gagttgtgttatttgaacatttatatatgtgataacttttgtgacaaccaaaattttgcaaaggaaatgagatattgacacaaaaatcaaagcaata 37503731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 71 - 167
Target Start/End: Original strand, 42356972 - 42357068
Alignment:
Q  71 gagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||| |||||||||||||||| ||||||||||||| || |||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  42356972 gagttgtgttatttgaacatccatatatgtgacaatttttgtgacaaccaaaattttacaaaggaaatgaggtagtgacacaaaaaccaaagcaata 42357068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 67 - 167
Target Start/End: Complemental strand, 44856140 - 44856040
Alignment:
Q  67 aaaagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaat 166  Q
    |||||||| |||||||||||||||| |||||||||||||||| | |||||| ||||||||||||||||||||||| ||||| |||||||||||||| |||    
T  44856140 aaaagagttgtgttatttgaacatccatatatgtgacaacttgtatgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaatcaaagaaat 44856041  T
Q  167 a 167  Q
    |    
T  44856040 a 44856040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 70 - 167
Target Start/End: Complemental strand, 52939835 - 52939738
Alignment:
Q  70 agagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||| |||||||||||||||| ||||||||||||||||  ||||||| ||||||||||||||||||||||| ||||| |||||||| ||||||||||    
T  52939835 agagttgtgttatttgaacatccatatatgtgacaactttcgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaaccaaagcaata 52939738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 71 - 167
Target Start/End: Complemental strand, 288909 - 288813
Alignment:
Q  71 gagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||| |||||||||||| ||| |||||||||||||||  ||| ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  288909 gagttgtgttatttgaaaatccatatatgtgacaactattgtaacaatcaaaattttacaaaagaaatgagatagtgacacaaaaaccaaagcaata 288813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 71 - 167
Target Start/End: Complemental strand, 19149173 - 19149077
Alignment:
Q  71 gagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||| |||||||||||||||| ||||||||||||| || |||||||||||||||||||||||||||||||| ||||| |||||||| |||| |||||    
T  19149173 gagttgtgttatttgaacatccatatatgtgacaatttttgtgacaatcaaaattttacaaaggaaatgagttagtggcacaaaaaccaaaacaata 19149077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 71 - 167
Target Start/End: Original strand, 44413283 - 44413379
Alignment:
Q  71 gagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| || || |||||||| | ||||||||    
T  44413283 gagttgtgttatttgaacatctatatatgtgacaacttttgtgacaattaaaattttacaaaggaaatgaggtattggcacaaaaaccgaagcaata 44413379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 76 - 167
Target Start/End: Complemental strand, 5244407 - 5244316
Alignment:
Q  76 gtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||||||||||||| |||||||||||||| || |||||||| ||||||||||||||||||||||| ||||| |||||||| ||||||||||    
T  5244407 gtgttatttgaacatttatatatgtgacaatttttgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaaccaaagcaata 5244316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 76 - 167
Target Start/End: Original strand, 24256664 - 24256755
Alignment:
Q  76 gtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| || ||| |||||||||||| |||||    
T  24256664 gtgttatttgaaaatctatatatgtgacaacttttgtgacaattaaaattttacaaaggaaatgaggtattgatacaaaaatcaaaacaata 24256755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 68 - 167
Target Start/End: Complemental strand, 33939424 - 33939325
Alignment:
Q  68 aaagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||||| |||||||||||||||| |||||||||||||||| |||||||| ||||||| | ||||||||||||  |||||||||||||| ||||||||||    
T  33939424 aaagagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattattcaaaggaaatgaagtagtgacacaaaaaccaaagcaata 33939325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 77 - 156
Target Start/End: Complemental strand, 47472506 - 47472427
Alignment:
Q  77 tgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaa 156  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||| ||||||||    
T  47472506 tgttatttgaacatctatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaa 47472427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 69 - 167
Target Start/End: Complemental strand, 44813321 - 44813223
Alignment:
Q  69 aagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||| |||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| || ||||| |||||||| | ||||||||    
T  44813321 aagagttgtgtgatttgaacatctatatatgtgacaacttttgtggcaatcaaaattttacaaaggaaattaggtagtggcacaaaaacccaagcaata 44813223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 69 - 167
Target Start/End: Complemental strand, 46624092 - 46623994
Alignment:
Q  69 aagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||| |||||||||||||||| ||| |||||| ||||| |||||||||||||||||||||||| ||||||| |||||||||||||| |||| |||||    
T  46624092 aagagttgtgttatttgaacatccatacatgtgataacttttgtgacaatcaaaattttacaaagaaaatgaggtagtgacacaaaaaccaaaacaata 46623994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 70 - 167
Target Start/End: Original strand, 52254025 - 52254122
Alignment:
Q  70 agagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||| |||| ||||||||||| ||||||||||||| || ||||||||  |||||||||||||||||||||| |||||||||||||| ||||||||||    
T  52254025 agagttgtgtcatttgaacatccatatatgtgacaatttttgtgacaactaaaattttacaaaggaaatgaggtagtgacacaaaaaccaaagcaata 52254122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 71 - 167
Target Start/End: Original strand, 16969454 - 16969550
Alignment:
Q  71 gagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||| |||||||||||||||| |||||||||||||||| ||||||||  |||||||||||||||||||||| ||||| || |||||||||| |||||    
T  16969454 gagttgtgttatttgaacatccatatatgtgacaacttttgtgacaactaaaattttacaaaggaaatgaggtagtggcataaaaatcaaaacaata 16969550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 71 - 167
Target Start/End: Original strand, 36670902 - 36670998
Alignment:
Q  71 gagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||| |||||||||||||||| |||||||||| ||||| |||||||| |||||||||||||| |||||||| ||||| |||||||| ||||||||||    
T  36670902 gagttgtgttatttgaacatccatatatgtgataacttttgtgacaaccaaaattttacaaatgaaatgaggtagtggcacaaaaaccaaagcaata 36670998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 68 - 167
Target Start/End: Original strand, 31157562 - 31157661
Alignment:
Q  68 aaagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||||| |||||||||||||||| |||||||||| |||||||||||| |||||||||||||||||||||| || || ||  |||||||||||| |||||    
T  31157562 aaagagttgtgttatttgaacatccatatatgtgataacttctgtgactatcaaaattttacaaaggaaattaggtattggtacaaaaatcaaaacaata 31157661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 70 - 164
Target Start/End: Original strand, 55151604 - 55151698
Alignment:
Q  70 agagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagca 164  Q
    ||||| ||||||||||||||| ||||||||||||||||| ||| ||||| |||||||||||||||||||||  || ||||||||||| |||||||    
T  55151604 agagttgtgttatttgaacatttatatatgtgacaacttttgttacaattaaaattttacaaaggaaatgaagtattgacacaaaaaccaaagca 55151698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 94 - 167
Target Start/End: Original strand, 20547901 - 20547974
Alignment:
Q  94 tatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  20547901 tatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaatcaaagcaata 20547974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 71 - 167
Target Start/End: Complemental strand, 7934157 - 7934062
Alignment:
Q  71 gagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||| |||||||||||||||| ||||||||||||| || ||||||||  |||||||||||||||| |||||||||||||| ||||| ||||||||||    
T  7934157 gagttgtgttatttgaacatccatatatgtgacaatttttgtgacaactaaaattttacaaaggatatgagatagtgaca-aaaaaccaaagcaata 7934062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 67 - 167
Target Start/End: Complemental strand, 35597349 - 35597249
Alignment:
Q  67 aaaagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaat 166  Q
    |||| ||| |||||||||||| ||  |||||||||||||||| |||||||| ||||||||||||||||||| ||| |||||||||||||| |||| ||||    
T  35597349 aaaaaagttgtgttatttgaatattcatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaacgaggtagtgacacaaaaaccaaaacaat 35597250  T
Q  167 a 167  Q
    |    
T  35597249 a 35597249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 68 - 167
Target Start/End: Complemental strand, 37302732 - 37302633
Alignment:
Q  68 aaagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||||| || ||||||||||||| ||| || ||||||||| |||||||||||||||||| ||||||||||||| ||||| |||||||| ||||| ||||    
T  37302732 aaagagttgtcttatttgaacatccatacatttgacaacttttgtgacaatcaaaattttgcaaaggaaatgaggtagtggcacaaaaaccaaagtaata 37302633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 71 - 148
Target Start/End: Complemental strand, 13735913 - 13735836
Alignment:
Q  71 gagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtga 148  Q
    |||| |||||||||||||||| |||||||||||||||| |||||||| ||||||||| ||||||||||||| ||||||    
T  13735913 gagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttgcaaaggaaatgaggtagtga 13735836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 71 - 167
Target Start/End: Complemental strand, 26014995 - 26014899
Alignment:
Q  71 gagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||| ||||||||| |||||||||| |||||||||||| |||||||| ||||||||||||||||||||||| ||  | |||||||| |||| |||||    
T  26014995 gagttgtgttatttaaacatctatacatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtaagggcacaaaaaccaaaacaata 26014899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 52326204 - 52326132
Alignment:
Q  69 aagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgag 141  Q
    |||||| |||||||||||||||| |||||| ||||||||| | ||||||||||||||||||||||||||||||    
T  52326204 aagagttgtgttatttgaacatccatatatatgacaacttttatgacaatcaaaattttacaaaggaaatgag 52326132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 69 - 167
Target Start/End: Original strand, 35376967 - 35377065
Alignment:
Q  69 aagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||| |||||||||||||||| || ||  ||||||||| |||||||| ||||||||||||||| ||||||  || || |||||||||||||||||||    
T  35376967 aagagttgtgttatttgaacatccatttagatgacaacttttgtgacaaccaaaattttacaaagaaaatgatgtattggcacaaaaatcaaagcaata 35377065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 67 - 167
Target Start/End: Original strand, 7668072 - 7668171
Alignment:
Q  67 aaaagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaat 166  Q
    |||||| | |||||||||||||||| ||| |||||||||||| |||||||| ||||||||| | |||||||| |||||||| || ||||| |||||||||    
T  7668072 aaaagaattgtgttatttgaacatccatacatgtgacaacttttgtgacaaccaaaattttgc-aaggaaataagatagtggcataaaaaccaaagcaat 7668170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 69 - 157
Target Start/End: Complemental strand, 44383374 - 44383286
Alignment:
Q  69 aagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaat 157  Q
    |||||| |||||||||||||||| || ||| ||||||||| || |||||||||||||||| |||| ||||||| || ||||||||||||    
T  44383374 aagagttgtgttatttgaacatccatttatatgacaacttttgagacaatcaaaattttataaagaaaatgaggtattgacacaaaaat 44383286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 68 - 167
Target Start/End: Original strand, 13348019 - 13348118
Alignment:
Q  68 aaagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||||  ||||||||||||||| || ||| ||||||||| || ||||| ||||||||||||||| ||||||| || ||| ||||||| ||||||||||    
T  13348019 aaagagttatgttatttgaacatccatttatatgacaacttttgggacaaccaaaattttacaaagaaaatgaggtattgatacaaaaaccaaagcaata 13348118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 61 - 159
Target Start/End: Complemental strand, 44445487 - 44445389
Alignment:
Q  61 attgtgaaaagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatca 159  Q
    ||||| ||||||||  ||||||||||||||| |||||||| ||||||| | |||||| |||||||||| |||| |||||||||| |  |||||||||||    
T  44445487 attgtaaaaagagttatgttatttgaacatcgatatatgtaacaacttttatgacaaccaaaattttataaagaaaatgagatatttgcacaaaaatca 44445389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 110 - 167
Target Start/End: Complemental strand, 41505635 - 41505578
Alignment:
Q  110 tgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  41505635 tgtgacaaccaaaattttacaaaggaaatgaggtagtgacacaaaaaccaaagcaata 41505578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 110 - 167
Target Start/End: Original strand, 44413849 - 44413906
Alignment:
Q  110 tgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||    
T  44413849 tgtgacaatcaaaattttacaaagaaaatgagatattgacacaaaaaccaaagcaata 44413906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 76 - 167
Target Start/End: Complemental strand, 8847287 - 8847197
Alignment:
Q  76 gtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||||||||||||| |||||||| ||||||| ||||| |||||||||||||||||  ||||||| || || |||||||| |||| |||||    
T  8847287 gtgttatttgaacatccatatatgt-acaacttttgtgataatcaaaattttacaaataaaatgaggtattggcacaaaaaccaaaacaata 8847197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 21217697 - 21217610
Alignment:
Q  69 aagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaa 156  Q
    |||||| |||||||||||||||| || ||| ||||||||| || ||||| |||||||||| |||| ||||||| || |||||||||||    
T  21217697 aagagttgtgttatttgaacatccatttatatgacaacttttgagacaaccaaaattttataaagaaaatgaggtattgacacaaaaa 21217610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 69 - 156
Target Start/End: Original strand, 37056943 - 37057030
Alignment:
Q  69 aagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaa 156  Q
    |||||| |||||||||||||||| || ||| ||||||||| || ||||| ||| ||||||||||| ||||||| || |||||||||||    
T  37056943 aagagttgtgttatttgaacatccatttatatgacaacttttgagacaaccaatattttacaaagaaaatgaggtattgacacaaaaa 37057030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 76 - 156
Target Start/End: Complemental strand, 23592636 - 23592556
Alignment:
Q  76 gtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaa 156  Q
    |||||||||||||||| || ||| ||||||||| || ||||| |||||||||| |||| ||||||| || |||||||||||    
T  23592636 gtgttatttgaacatccatttatatgacaacttttgagacaaccaaaattttataaagaaaatgaggtattgacacaaaaa 23592556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 76 - 167
Target Start/End: Original strand, 35201327 - 35201418
Alignment:
Q  76 gtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||||||||||||| || ||  ||||||||| || |||||| |||||| ||||||| |||| ||||| ||||||||||| |||| |||||    
T  35201327 gtgttatttgaacatccatttaaatgacaacttttgagacaattaaaattatacaaagaaaataagatattgacacaaaaaccaaaacaata 35201418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 76 - 162
Target Start/End: Complemental strand, 44463535 - 44463449
Alignment:
Q  76 gtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaag 162  Q
    |||||||||||||||| |  ||| ||| ||||| || || |||||||||||||||||| ||||| |||| ||| |||||||||||||    
T  44463535 gtgttatttgaacatcaaattatatgataacttttgagataatcaaaattttacaaagaaaatgtgatattgatacaaaaatcaaag 44463449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 110 - 155
Target Start/End: Original strand, 50318316 - 50318361
Alignment:
Q  110 tgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaa 155  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||    
T  50318316 tgtgacaaccaaaattttacaaaggaaatgagatagtggcacaaaa 50318361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 165
Target Start/End: Complemental strand, 42889168 - 42889074
Alignment:
Q  71 gagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaa 165  Q
    |||| ||||||||| ||||||||| ||  ||||||||| ||  | || ||||||||||||||| ||||||| || || |||||||| ||||||||    
T  42889168 gagttgtgttatttaaacatctatttagatgacaacttttgatataaccaaaattttacaaagaaaatgagttattggcacaaaaaccaaagcaa 42889074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 161
Target Start/End: Original strand, 14226635 - 14226683
Alignment:
Q  113 gacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaa 161  Q
    ||||||||||||||||||||| |||||| ||| ||||||||||| ||||    
T  14226635 gacaatcaaaattttacaaagaaaatgaaatattgacacaaaaaccaaa 14226683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 140
Target Start/End: Complemental strand, 23600771 - 23600707
Alignment:
Q  76 gtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatga 140  Q
    |||||||||||||||| || ||| ||||||||| || ||||| |||||||||| |||| ||||||    
T  23600771 gtgttatttgaacatccatttatatgacaacttttgagacaaccaaaattttataaagaaaatga 23600707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 167
Target Start/End: Complemental strand, 45000198 - 45000150
Alignment:
Q  119 caaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||||||||||||||||||||| ||||| |||||||| |||| |||||    
T  45000198 caaaattttacaaaggaaatgaggtagtggcacaaaaaccaaatcaata 45000150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 156
Target Start/End: Original strand, 25641467 - 25641556
Alignment:
Q  67 aaaagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaa 156  Q
    |||||||| || ||||||||||||| || ||| ||||||||| || ||||| |||| ||||||| || |||| || || || ||||||||    
T  25641467 aaaagagttgtattatttgaacatccatttatatgacaacttttgagacaaccaaagttttacatagaaaataaggtattggcacaaaaa 25641556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 140
Target Start/End: Original strand, 11630643 - 11630707
Alignment:
Q  76 gtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatga 140  Q
    |||||||||||||||  || ||| |||||| || || |||||| |||||||||||||| ||||||    
T  11630643 gtgttatttgaacattcatttatatgacaatttttgagacaattaaaattttacaaagaaaatga 11630707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 125
Target Start/End: Complemental strand, 42478145 - 42478086
Alignment:
Q  68 aaagagtcgtgttatttgaacatc--tatatatgtgacaacttctgtgacaatcaaaatt 125  Q
    ||||||| ||||||||||||||||  ||||||| ||| ||||| |||||||| |||||||    
T  42478145 aaagagttgtgttatttgaacatccatatatatatgataacttttgtgacaaccaaaatt 42478086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 167
Target Start/End: Original strand, 45711355 - 45711423
Alignment:
Q  99 gtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||||||| ||| |||| ||||||||||||||| ||||||  || |||||||| || |||| |||||    
T  45711355 gtgacaacttttgtaacaaccaaaattttacaaagaaaatgaagtattgacacaataaccaaaacaata 45711423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 73; Significance: 2e-33; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 71 - 167
Target Start/End: Complemental strand, 39440667 - 39440571
Alignment:
Q  71 gagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||| |||||||||||||||  |||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  39440667 gagttgtgttatttgaacattcatatatgtgacaacttttgtgacaatcaaaattttagaaaggaaatgaggtagtgacacaaaaatcaaagcaata 39440571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 69 - 167
Target Start/End: Complemental strand, 26492192 - 26492094
Alignment:
Q  69 aagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||| |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||  ||||| |||||||| ||||||||||    
T  26492192 aagagttgtgttatttgaacatctatatatgtgacaatttttgtgacaatcaaaattttacaaaggaaatgaagtagtggcacaaaaaccaaagcaata 26492094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 71 - 167
Target Start/End: Original strand, 38376378 - 38376474
Alignment:
Q  71 gagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||| ||||||||||||||||||||||||||| || || |||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||    
T  38376378 gagttgtgttatttgaacatctatatatgtgataatttttgtgacaatcaaaattttacaaagaaaatgagatagtggcacaaaaatcaaagtaata 38376474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 71 - 163
Target Start/End: Complemental strand, 43175167 - 43175075
Alignment:
Q  71 gagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagc 163  Q
    |||| |||||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||| ||||||    
T  43175167 gagttgtgttatttgaacatccatatatgtgacaacttttgtgataatcaaaattttacaaaggaaatgaggtagtgacacaaaaaccaaagc 43175075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 67 - 167
Target Start/End: Complemental strand, 51986229 - 51986129
Alignment:
Q  67 aaaagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaat 166  Q
    |||||||| |||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||| ||||| |||||||| ||||| |||    
T  51986229 aaaagagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaaccaaagaaat 51986130  T
Q  167 a 167  Q
    |    
T  51986129 a 51986129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 69 - 167
Target Start/End: Original strand, 23369218 - 23369316
Alignment:
Q  69 aagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||| |||||||||||||||| |||||||||||||||| |||||||| |||||| |||||||||||||||| ||||| |||||||| ||||||||||    
T  23369218 aagagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaatcttacaaaggaaatgaggtagtggcacaaaaaccaaagcaata 23369316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 69 - 167
Target Start/End: Complemental strand, 44539919 - 44539821
Alignment:
Q  69 aagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||| |||||||||||||||  |||||||||||||||| |||||||| ||||||||||||||||||||||| ||||| |||||||| ||||||||||    
T  44539919 aagagttgtgttatttgaacattcatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtgtcacaaaaaccaaagcaata 44539821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 71 - 167
Target Start/End: Original strand, 53801647 - 53801743
Alignment:
Q  71 gagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||| |||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||| || |||||||||||  |||||||||    
T  53801647 gagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtattgacacaaaaactaaagcaata 53801743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 76 - 167
Target Start/End: Complemental strand, 11068866 - 11068775
Alignment:
Q  76 gtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||||||||||||  |||||||||||||||| |||| ||| |||||||||||||||||||||||  ||||||||||||||||||||||||    
T  11068866 gtgttatttgaacattcatatatgtgacaacttttgtggcaaccaaaattttacaaaggaaatgaggcagtgacacaaaaatcaaagcaata 11068775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 76 - 167
Target Start/End: Original strand, 24575744 - 24575835
Alignment:
Q  76 gtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||||||||| || || |||||||| ||||||||||    
T  24575744 gtgttatttgaacatctatatatgtgacaacttttgtgacaaccaaaattttataaaggaaatgaggtattggcacaaaaaccaaagcaata 24575835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 68 - 167
Target Start/End: Complemental strand, 26732411 - 26732312
Alignment:
Q  68 aaagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||||| |||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||| ||||||| ||||| |||||||| |||| |||||    
T  26732411 aaagagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaaacaata 26732312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 70 - 167
Target Start/End: Complemental strand, 27965169 - 27965074
Alignment:
Q  70 agagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||||  || ||||||||| |||||||||||||| ||||||||||    
T  27965169 agagttgtgttatttgaacatccatatatgtgacaacttctgtgacaaccaaaatttt--aatggaaatgaggtagtgacacaaaaaccaaagcaata 27965074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 69 - 167
Target Start/End: Complemental strand, 37297233 - 37297136
Alignment:
Q  69 aagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||| |||||||||||||||| |||||| ||||||||| |||||||| ||||||||||| ||||||||||| |||||||||||||| ||||||||||    
T  37297233 aagagttgtgttatttgaacatccatatatttgacaacttttgtgacaaccaaaattttac-aaggaaatgaggtagtgacacaaaaaccaaagcaata 37297136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 68 - 165
Target Start/End: Complemental strand, 29175411 - 29175314
Alignment:
Q  68 aaagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaa 165  Q
    ||||||| |||||||||||||||  |||||||||||||||| |||||||| ||||||||||||||| ||||||| || ||||||||||| ||||||||    
T  29175411 aaagagttgtgttatttgaacattcatatatgtgacaacttttgtgacaaccaaaattttacaaagtaaatgagctattgacacaaaaaccaaagcaa 29175314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 68 - 166
Target Start/End: Original strand, 31641450 - 31641548
Alignment:
Q  68 aaagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaat 166  Q
    ||||||| |||||||||||||||  ||||| |||| ||||| |||||||| |||||||||| ||||||||| || ||||||||||||||||||||||||    
T  31641450 aaagagttgtgttatttgaacattcatatacgtgataacttttgtgacaaccaaaattttataaaggaaataaggtagtgacacaaaaatcaaagcaat 31641548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 70 - 167
Target Start/End: Original strand, 26724859 - 26724956
Alignment:
Q  70 agagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||| |||||||||||||||| |||||||||| ||||| ||| ||||  |||||||||||||||||||||| |||||||||||||| |||| |||||    
T  26724859 agagttgtgttatttgaacatccatatatgtgataacttttgtaacaactaaaattttacaaaggaaatgaggtagtgacacaaaaaccaaaacaata 26724956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 66 - 167
Target Start/End: Complemental strand, 37997442 - 37997341
Alignment:
Q  66 gaaaagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaa 165  Q
    ||||||||  ||| ||||||||||||||||||||||| || || ||| |||| ||||||||||||||| ||||||| || ||||||||||||||||||||    
T  37997442 gaaaagagctgtgctatttgaacatctatatatgtgataatttttgttacaaccaaaattttacaaagaaaatgaggtattgacacaaaaatcaaagcaa 37997343  T
Q  166 ta 167  Q
    ||    
T  37997342 ta 37997341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 76 - 167
Target Start/End: Original strand, 10250408 - 10250499
Alignment:
Q  76 gtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||||||||||||| ||||||| |||||||| |||||||| ||||||||||||||| ||||||  ||||| |||||||| ||||||||||    
T  10250408 gtgttatttgaacatccatatatgcgacaacttttgtgacaaccaaaattttacaaagaaaatgaagtagtggcacaaaaaccaaagcaata 10250499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 76 - 167
Target Start/End: Original strand, 27050979 - 27051070
Alignment:
Q  76 gtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||||||||||||  ||| |||||||||||| |||||||| ||||||||||||||| |||||||||| ||||||||||| |||| |||||    
T  27050979 gtgttatttgaacattcataaatgtgacaacttttgtgacaaccaaaattttacaaagaaaatgagatattgacacaaaaaccaaaacaata 27051070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 70 - 167
Target Start/End: Complemental strand, 5622642 - 5622545
Alignment:
Q  70 agagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||| |||||||||||| |||||||||||| ||||||| ||||| ||  |||||||||||||||||||||| ||||  |||||||| ||||||||||    
T  5622642 agagttgtgttatttgaagatctatatatgtcacaacttttgtgataactaaaattttacaaaggaaatgaggtagttgcacaaaaaccaaagcaata 5622545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 70 - 167
Target Start/End: Complemental strand, 36178090 - 36177993
Alignment:
Q  70 agagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||| ||||||||||||||| ||||||||||| ||||| ||||||||  ||||||||| |||||||||||| |||||  ||||||| ||||||||||    
T  36178090 agagttgtgttatttgaacatttatatatgtgataacttttgtgacaactaaaattttataaaggaaatgaggtagtggtacaaaaaccaaagcaata 36177993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 34616746 - 34616659
Alignment:
Q  69 aagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaa 156  Q
    |||||| ||||||||||||||||||| ||| ||||||||| || ||||| |||||||||| |||| |||||||||| |||||||||||    
T  34616746 aagagttgtgttatttgaacatctatttatatgacaacttttgagacaaccaaaattttataaagaaaatgagatattgacacaaaaa 34616659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 69 - 167
Target Start/End: Original strand, 2575676 - 2575774
Alignment:
Q  69 aagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||| ||||||||||||||||||| ||| ||||||||| ||||||||  ||| |||||||||| |||||||| | ||||||| ||| ||||||||||    
T  2575676 aagagttgtgttatttgaacatctatttatatgacaacttttgtgacaactaaagttttacaaagaaaatgagagattgacacacaaaccaaagcaata 2575774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 69 - 167
Target Start/End: Complemental strand, 39478622 - 39478524
Alignment:
Q  69 aagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||| |||||  || |||||| |||||| ||||||||| |||||||| ||||||||||||||| ||||||| || ||||||||||||||||| ||||    
T  39478622 aagagttgtgtttattaaacatccatatatatgacaacttttgtgacaaccaaaattttacaaagaaaatgaggtattgacacaaaaatcaaagtaata 39478524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 71 - 165
Target Start/End: Complemental strand, 46213153 - 46213059
Alignment:
Q  71 gagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaa 165  Q
    |||| |||||||||||| ||| |||||||||| ||||| ||| |||| ||||||||||||||||||||||| ||||  |||||||| ||||||||    
T  46213153 gagttgtgttatttgaaaatccatatatgtgaaaacttttgtaacaaccaaaattttacaaaggaaatgaggtagttgcacaaaaaccaaagcaa 46213059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 79 - 167
Target Start/End: Complemental strand, 15175721 - 15175633
Alignment:
Q  79 ttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||||||||||| |||||||||||||||| ||| |||| ||||||||||||||||||||||| || |  ||||||||  |||||||||    
T  15175721 ttatttgaacatccatatatgtgacaacttttgttacaaccaaaattttacaaaggaaatgaggtattagcacaaaaacaaaagcaata 15175633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 79 - 167
Target Start/End: Complemental strand, 38134528 - 38134440
Alignment:
Q  79 ttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||||||||||  ||| |||||||||||| ||||| || |||||||||||||||||||||||  ||||||||||||| |||| |||||    
T  38134528 ttatttgaacattcatacatgtgacaacttttgtgataaccaaaattttacaaaggaaatgaggcagtgacacaaaaaccaaaacaata 38134440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 99 - 167
Target Start/End: Complemental strand, 40348949 - 40348881
Alignment:
Q  99 gtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||||||| ||||||||||||||||||  |||| |||||||||||||||||||||| ||||||||||    
T  40348949 gtgacaacttttgtgacaatcaaaattttttaaagaaaatgagatagtgacacaaaaaccaaagcaata 40348881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 69 - 167
Target Start/End: Complemental strand, 39195242 - 39195144
Alignment:
Q  69 aagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||| ||||||||||||||||||| ||| ||||||| | ||||| ||||||| |||||||||| |||||||| | || |||| ||| ||||||||||    
T  39195242 aagagttgtgttatttgaacatctatttatatgacaacatttgtgataatcaaagttttacaaagaaaatgagagattggcacacaaaccaaagcaata 39195144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 69 - 167
Target Start/End: Complemental strand, 42853762 - 42853664
Alignment:
Q  69 aagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||| |||||||||||||||| || |  ||||||| || || |||||||||||||||| |||| ||||||| || ||||||||||| ||||||||||    
T  42853762 aagagttgtgttatttgaacatccatttgagtgacaatttttgagacaatcaaaattttataaagaaaatgaggtattgacacaaaaaccaaagcaata 42853664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 38382506 - 38382419
Alignment:
Q  69 aagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaa 156  Q
    |||||| |||||||||||||||| || ||| ||||||||| || ||||| |||||||||| |||| ||||||| || |||||||||||    
T  38382506 aagagttgtgttatttgaacatccatttatatgacaacttttgagacaaccaaaattttataaagaaaatgaggtattgacacaaaaa 38382419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 47182026 - 47181939
Alignment:
Q  69 aagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaa 156  Q
    |||||| |||||||||||||||| || ||| ||||||||| || ||||| |||||||||| |||| ||||||| || |||||||||||    
T  47182026 aagagttgtgttatttgaacatccatttatatgacaacttttgagacaaccaaaattttataaagaaaatgaggtattgacacaaaaa 47181939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 69 - 156
Target Start/End: Original strand, 48402083 - 48402170
Alignment:
Q  69 aagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaa 156  Q
    |||||| |||||||||||||||| || ||| ||||||||| || ||||| |||||||||| |||| ||||||| || |||||||||||    
T  48402083 aagagttgtgttatttgaacatccatttatatgacaacttttgagacaaccaaaattttataaagaaaatgaggtattgacacaaaaa 48402170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 110 - 167
Target Start/End: Original strand, 2268434 - 2268491
Alignment:
Q  110 tgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||||| |||||||||||||||||||||||||| ||||||||||| |||| |||||    
T  2268434 tgtgacaaccaaaattttacaaaggaaatgagatattgacacaaaaaccaaaacaata 2268491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 110 - 167
Target Start/End: Original strand, 29531533 - 29531590
Alignment:
Q  110 tgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||| |||| |||||    
T  29531533 tgtgacaaccaaaattttacaaaggaaatgaggtagtgacacaaaaaccaaaacaata 29531590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 110 - 167
Target Start/End: Complemental strand, 46634244 - 46634187
Alignment:
Q  110 tgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||||||  |||||||||||||||||||||| |||||||||||||||||||| ||||    
T  46634244 tgtgacaactaaaattttacaaaggaaatgaggtagtgacacaaaaatcaaagtaata 46634187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 110 - 167
Target Start/End: Original strand, 50608551 - 50608608
Alignment:
Q  110 tgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||||||  ||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  50608551 tgtgacaactaaaattttacaaaggaaatgagatattgacacaaaaatcaaagtaata 50608608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 76 - 167
Target Start/End: Original strand, 11672016 - 11672107
Alignment:
Q  76 gtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||||||||| |||||| ||| | ||||||| ||||||| | ||||||||| |||| |||| |  || ||||||||||||||||||||||    
T  11672016 gtgttatttgaaaatctatttatattacaacttttgtgacacttaaaattttataaagaaaataaattattgacacaaaaatcaaagcaata 11672107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 77 - 140
Target Start/End: Complemental strand, 45083149 - 45083086
Alignment:
Q  77 tgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatga 140  Q
    ||||||||||||||| |||||||||||||||| | | ||||||||||||||| |||| ||||||    
T  45083149 tgttatttgaacatccatatatgtgacaacttttattacaatcaaaattttataaagaaaatga 45083086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 71 - 133
Target Start/End: Original strand, 5233558 - 5233620
Alignment:
Q  71 gagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaag 133  Q
    |||| ||||||||||||||||||| ||||| ||||||| ||  ||||||||||||||||||||    
T  5233558 gagttgtgttatttgaacatctatttatgtaacaacttttgaaacaatcaaaattttacaaag 5233620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 161
Target Start/End: Original strand, 19473840 - 19473934
Alignment:
Q  67 aaaagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaa 161  Q
    |||||| | |||||||||||| ||  || ||| ||||||||| || ||||||||||||||||||||| ||||||  || ||||||||||| ||||    
T  19473840 aaaagatttgtgttatttgaagatgcatttatatgacaacttttgagacaatcaaaattttacaaagaaaatgaagtattgacacaaaaaccaaa 19473934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 155
Target Start/End: Original strand, 56363931 - 56364017
Alignment:
Q  69 aagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaa 155  Q
    |||||| |||||||||||||||| || ||  ||||||||| || ||||| |||||||||| |||| ||||||| || ||||||||||    
T  56363931 aagagttgtgttatttgaacatccatttacatgacaacttttgagacaaccaaaattttataaagaaaatgaggtattgacacaaaa 56364017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 167
Target Start/End: Complemental strand, 39655009 - 39654911
Alignment:
Q  69 aagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||| |||||||||||||| |||| ||  ||| || || |  ||||| || || ||||||||| ||||||| || ||||||||||||||||||||||    
T  39655009 aagagttgtgttatttgaacaactatttagatgataatttttaagacaaccataaatttacaaagaaaatgaggtattgacacaaaaatcaaagcaata 39654911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 140
Target Start/End: Complemental strand, 39606147 - 39606086
Alignment:
Q  79 ttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatga 140  Q
    |||||||||||| ||||||||||||||||| |  || || |||||||||| |||||||||||    
T  39606147 ttatttgaacatttatatatgtgacaacttttacgataaccaaaattttataaaggaaatga 39606086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 70 - 167
Target Start/End: Original strand, 50831642 - 50831739
Alignment:
Q  70 agagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||| |||||||||||||| | || |   ||||||||| || ||||| || |||||||||||| ||| ||| |  ||||||||||||||||||||||    
T  50831642 agagttgtgttatttgaacaaccatttgattgacaacttttgggacaaccataattttacaaagaaaaagaggtcttgacacaaaaatcaaagcaata 50831739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 167
Target Start/End: Original strand, 7632349 - 7632445
Alignment:
Q  71 gagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||| ||||||||||||||||  | ||| ||||||| | ||  |||| ||||||||||||||  |||||||  | || |||||||||||||||||||    
T  7632349 gagttgtgttatttgaacatcattttatatgacaacctttgcaacaaccaaaattttacaaataaaatgagtgattggcacaaaaatcaaagcaata 7632445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 74 - 153
Target Start/End: Complemental strand, 39447926 - 39447848
Alignment:
Q  74 tcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaa 153  Q
    |||||||||| ||||| | || ||||||| |||| ||| || |||||||||||||||||| ||||||| || ||||||||    
T  39447926 tcgtgttattcgaacaaccatttatgtgataact-ctgagataatcaaaattttacaaagaaaatgaggtattgacacaa 39447848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 76 - 167
Target Start/End: Original strand, 56474660 - 56474751
Alignment:
Q  76 gtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||||||||||||||||  |  | |||| || || ||||| ||||| ||||||||| ||||||| || ||||||||||| |||| |||||    
T  56474660 gtgttatttgaacatctattcacataacaatttttgagacaaccaaaactttacaaagaaaatgaggtattgacacaaaaaccaaaacaata 56474751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 164
Target Start/End: Original strand, 50721631 - 50721725
Alignment:
Q  70 agagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagca 164  Q
    ||||| ||||||||||||||||  | ||| ||||||| | ||  ||||  |||||||||||||| |||||||  | ||||||||||| |||||||    
T  50721631 agagttgtgttatttgaacatcattttatatgacaacctttgcaacaactaaaattttacaaagaaaatgagtgattgacacaaaaaccaaagca 50721725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 167
Target Start/End: Complemental strand, 51255880 - 51255834
Alignment:
Q  121 aaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||||||||||| || | |||||||| |||||||||||||||||||    
T  51255880 aaattttacaaagaaatttagatagtggcacaaaaatcaaagcaata 51255834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 106
Target Start/End: Original strand, 2268405 - 2268442
Alignment:
Q  69 aagagtcgtgttatttgaacatctatatatgtgacaac 106  Q
    |||||| |||||||||||||||| ||||||||||||||    
T  2268405 aagagttgtgttatttgaacatccatatatgtgacaac 2268442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 3316529 - 3316476
Alignment:
Q  79 ttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaa 132  Q
    ||||||||||||| || ||  ||||||||| || ||||||||||||||||||||    
T  3316529 ttatttgaacatccatttagatgacaacttttgagacaatcaaaattttacaaa 3316476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 167
Target Start/End: Original strand, 26907970 - 26908067
Alignment:
Q  71 gagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacac-aaaaatcaaagcaata 167  Q
    |||| |||||||||||| ||| |||||||||| || || | ||||||| ||||||||| |||   |||||  |||| |||| ||||||||||||||||    
T  26907970 gagttgtgttatttgaatatccatatatgtgataatttttatgacaattaaaattttataaaaataatgaagtagtaacacaaaaaatcaaagcaata 26908067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 108
Target Start/End: Original strand, 53786103 - 53786140
Alignment:
Q  71 gagtcgtgttatttgaacatctatatatgtgacaactt 108  Q
    |||| |||||||||||||||| ||||||||||||||||    
T  53786103 gagttgtgttatttgaacatccatatatgtgacaactt 53786140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 71 - 138
Target Start/End: Original strand, 38510661 - 38510726
Alignment:
Q  71 gagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaat 138  Q
    |||| ||||||||| ||||| ||||||||  | || || ||||||||||||||||||| |||||||||    
T  38510661 gagttgtgttatttcaacatttatatatg--ataatttttgtgacaatcaaaattttataaaggaaat 38510726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 71 - 107
Target Start/End: Complemental strand, 46634271 - 46634235
Alignment:
Q  71 gagtcgtgttatttgaacatctatatatgtgacaact 107  Q
    |||| |||||||||||||||| |||||||||||||||    
T  46634271 gagttgtgttatttgaacatccatatatgtgacaact 46634235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 72; Significance: 9e-33; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 68 - 167
Target Start/End: Complemental strand, 649955 - 649856
Alignment:
Q  68 aaagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||||| |||||||||||||||| | |||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  649955 aaagagttgtgttatttgaacatccacatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtgacacaaaaaccaaagcaata 649856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 76 - 167
Target Start/End: Complemental strand, 35369878 - 35369787
Alignment:
Q  76 gtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||||||||||||| |||||||||||||||| |||||||| |||||||||| |||||||||||| |||||||||||||||||||||||||    
T  35369878 gtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttataaaggaaatgaggtagtgacacaaaaatcaaagcaata 35369787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 76 - 167
Target Start/End: Complemental strand, 45333889 - 45333798
Alignment:
Q  76 gtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||||||||||||||||||||||||| || || ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||    
T  45333889 gtgttatttgaacatctatatatgtgataatttttgtgacaattaaaattttacaaaggaaatgaggtagtgacacaaaaatcaaagcaata 45333798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 69 - 167
Target Start/End: Original strand, 27464943 - 27465041
Alignment:
Q  69 aagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||| |||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||| ||||| |||||||| ||||||||||    
T  27464943 aagagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaaccaaagcaata 27465041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 71 - 167
Target Start/End: Complemental strand, 26469542 - 26469446
Alignment:
Q  71 gagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||| |||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||| | ||||||||    
T  26469542 gagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtgacacaaaaaccgaagcaata 26469446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 68 - 167
Target Start/End: Original strand, 37274918 - 37275017
Alignment:
Q  68 aaagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||||| ||||||||||||||||  || |||||||||||| |||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||    
T  37274918 aaagagttgtgttatttgaacatccttacatgtgacaacttttgtgacaatcaaaattttgcaaaggaaatgaggtagtgacacaaaaaccaaagcaata 37275017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 69 - 167
Target Start/End: Original strand, 45121367 - 45121464
Alignment:
Q  69 aagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||| |||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||| ||||| |||||||| ||||||||||    
T  45121367 aagagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgag-tagtggcacaaaaaccaaagcaata 45121464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 77 - 167
Target Start/End: Complemental strand, 50932481 - 50932391
Alignment:
Q  77 tgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||||||||||||| |||||||||||||||| ||| |||| ||||||||||||||||||||||| || ||||||||||||||||||||||    
T  50932481 tgttatttgaacatccatatatgtgacaacttttgttacaaccaaaattttacaaaggaaatgaggtattgacacaaaaatcaaagcaata 50932391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 70 - 167
Target Start/End: Complemental strand, 33100992 - 33100895
Alignment:
Q  70 agagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||| |||||||||||||||  |||||||||||||||| |||||||| |||||||||| |||||||||||| ||||||||||||||||||| |||||    
T  33100992 agagttgtgttatttgaacattcatatatgtgacaacttttgtgacaaccaaaattttataaaggaaatgaggtagtgacacaaaaatcaaaacaata 33100895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 67 - 167
Target Start/End: Original strand, 19055643 - 19055743
Alignment:
Q  67 aaaagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaat 166  Q
    |||||||| |||||||||||||||| |||||||||||||||| ||||||||  ||||||||||||||||||||||||| || |||||||| |||| ||||    
T  19055643 aaaagagttgtgttatttgaacatccatatatgtgacaacttttgtgacaactaaaattttacaaaggaaatgagatattgtcacaaaaaccaaaacaat 19055742  T
Q  167 a 167  Q
    |    
T  19055743 a 19055743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 67 - 167
Target Start/End: Complemental strand, 45640488 - 45640389
Alignment:
Q  67 aaaagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaat 166  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||  ||| |||||||||||||| ||||||||||| || ||||||||||||||||||    
T  45640488 aaaagagttgtgttatttgaacatctatatatgtgacaacttttgttgcaaccaaaattttacaaa-gaaatgagatattggcacaaaaatcaaagcaat 45640390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 71 - 167
Target Start/End: Complemental strand, 48470822 - 48470726
Alignment:
Q  71 gagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||| ||| |||| |||||    
T  48470822 gagttgtgttatttgaacatccatatatgtgacaacttttgtgacaatcaaaattttacaaaggaaatgagatattggcacagaaaccaaaacaata 48470726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 69 - 167
Target Start/End: Complemental strand, 31088366 - 31088268
Alignment:
Q  69 aagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||| |||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||  ||||||| ||||| |||||||| ||||||||||    
T  31088366 aagagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaaaaaatgaggtagtggcacaaaaaccaaagcaata 31088268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 41982960 - 41983029
Alignment:
Q  1 aaaagaggaaattggatttgcaaagcgatgatcatctattatccaagtagaaatcaaacaattgtgaaaa 70  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||    
T  41982960 aaaagaggaaattggatttgcaaagggatgatcatccattatccaagtagaaatcaaaccattgtgaaaa 41983029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 71 - 167
Target Start/End: Original strand, 44914459 - 44914556
Alignment:
Q  71 gagtcgtgttatttgaacatctatatatgtgacaacttct-gtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||| |||||||||||||||| ||||||||||||| || | | ||||||||||||||||||||||||||||| ||||||||||||||  |||||||||    
T  44914459 gagttgtgttatttgaacatccatatatgtgacaattttttgcgacaatcaaaattttacaaaggaaatgaggtagtgacacaaaaactaaagcaata 44914556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 71 - 167
Target Start/End: Original strand, 3981914 - 3982010
Alignment:
Q  71 gagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||| |||||||||||||||| ||| |||||||||| | |||||||||||||||||||||||| |||||||||| |||||||| || |||| |||||    
T  3981914 gagttgtgttatttgaacatccataaatgtgacaacatttgtgacaatcaaaattttacaaagaaaatgagatattgacacaataaccaaaacaata 3982010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 71 - 167
Target Start/End: Original strand, 8350087 - 8350182
Alignment:
Q  71 gagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||| |||||||||||||||| ||||||||||||||||  ||||||| ||||| |||||||||||||| || |||||||||||||| ||||||||||    
T  8350087 gagttgtgttatttgaacatccatatatgtgacaactttcgtgacaaccaaaa-tttacaaaggaaataaggtagtgacacaaaaaccaaagcaata 8350182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 71 - 167
Target Start/End: Original strand, 44519039 - 44519135
Alignment:
Q  71 gagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||| |||||||||||||||  |||||||||||||||| ||||| || ||||||||||||||||||||||| || |  |||||||||||||||||||    
T  44519039 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacaaaggaaatgaggtattagcacaaaaatcaaagcaata 44519135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 68 - 167
Target Start/End: Complemental strand, 23645597 - 23645498
Alignment:
Q  68 aaagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||||  ||||||||||||||  |||||||| ||||||| |||||||| ||||||||||||||||||||||| ||||| |||||||| |||| |||||    
T  23645597 aaagagttatgttatttgaacatacatatatgtaacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaaccaaaacaata 23645498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 77 - 167
Target Start/End: Complemental strand, 3851335 - 3851245
Alignment:
Q  77 tgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||||||||||||| |||||||||||||||| | |||||| |||||||||| |||||||||||| |||||||| ||||| |||| |||||    
T  3851335 tgttatttgaacatccatatatgtgacaacttttatgacaaccaaaattttataaaggaaatgaggtagtgacagaaaaaccaaaacaata 3851245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 77 - 167
Target Start/End: Complemental strand, 37619721 - 37619631
Alignment:
Q  77 tgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||||||||||||| |||||||||||||||| | | |||| ||||||||||||||||||||||| || || |||||||||||| ||||||    
T  37619721 tgttatttgaacatccatatatgtgacaacttttattacaaccaaaattttacaaaggaaatgaggtattggcacaaaaatcaacgcaata 37619631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 77 - 167
Target Start/End: Complemental strand, 37685506 - 37685416
Alignment:
Q  77 tgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||||||||||||  ||| |||||| || || ||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||    
T  37685506 tgttatttgaacattcatacatgtgataatttttgtgacaattaaaattttacaaaagaaatgaggtagtgacacaaaaatcaaagcaata 37685416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 77 - 167
Target Start/End: Original strand, 37700012 - 37700102
Alignment:
Q  77 tgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||||||||||||  ||| |||||| || || ||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||    
T  37700012 tgttatttgaacattcatacatgtgataatttttgtgacaattaaaattttacaaaagaaatgaggtagtgacacaaaaatcaaagcaata 37700102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 76 - 162
Target Start/End: Original strand, 40861155 - 40861241
Alignment:
Q  76 gtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaag 162  Q
    |||||||||||||||||||||||||| |||||| ||||||||  ||||||||| ||||||||| |||||||| |||||||| |||||    
T  40861155 gtgttatttgaacatctatatatgtgtcaacttttgtgacaactaaaattttataaaggaaataagatagtggcacaaaaaccaaag 40861241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 69 - 161
Target Start/End: Complemental strand, 21401583 - 21401491
Alignment:
Q  69 aagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaa 161  Q
    |||||| |||||||||||||||| || ||||||||||||| ||  |||||||||||||||||||| ||||||| || ||||||||||| ||||    
T  21401583 aagagttgtgttatttgaacatccatttatgtgacaacttttgaaacaatcaaaattttacaaagaaaatgaggtattgacacaaaaaccaaa 21401491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 71 - 167
Target Start/End: Original strand, 50726136 - 50726232
Alignment:
Q  71 gagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||| |||||||||||||||| |||||||||| || || |||||||| ||||||||| ||||| ||||||| ||||| ||||||||||||| |||||    
T  50726136 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttgcaaagaaaatgaggtagtggcacaaaaatcaaaacaata 50726232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 67 - 156
Target Start/End: Complemental strand, 43775393 - 43775304
Alignment:
Q  67 aaaagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaa 156  Q
    |||||| | |||||||||||| ||  |||||||||||||||| | |||||||||||||||||||||| |||||||||| ||| |||||||    
T  43775393 aaaagacttgtgttatttgaatattcatatatgtgacaacttttatgacaatcaaaattttacaaagaaaatgagatattgatacaaaaa 43775304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 69 - 167
Target Start/End: Original strand, 30467419 - 30467517
Alignment:
Q  69 aagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||| ||||||||||||||||||  ||| ||||||||| ||||||||  ||| |||||||||| ||| |||| | ||||||| ||||||||||||||    
T  30467419 aagagttgtgttatttgaacatctaattatatgacaacttttgtgacaactaaagttttacaaagaaaacgagagattgacacacaaatcaaagcaata 30467517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 70 - 167
Target Start/End: Original strand, 52576188 - 52576286
Alignment:
Q  70 agagtcgtgttatttgaacatct-atatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||| ||||||||||||||  | ||||| |||||||||| |||||||| ||||||||||||||||||||||| ||  | |||||||| ||||||||||    
T  52576188 agagttgtgttatttgaacaattcatataggtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtaccggcacaaaaaccaaagcaata 52576286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 67 - 167
Target Start/End: Complemental strand, 50149133 - 50149033
Alignment:
Q  67 aaaagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaat 166  Q
    |||||||| ||||||||||||||||  | ||| ||||||||| ||  |||||||||||||||||||| ||||||   | ||||||||||| |||||||||    
T  50149133 aaaagagttgtgttatttgaacatcattttatatgacaacttttgcaacaatcaaaattttacaaagaaaatgattgattgacacaaaaaccaaagcaat 50149034  T
Q  167 a 167  Q
    |    
T  50149033 a 50149033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 71 - 157
Target Start/End: Complemental strand, 2571819 - 2571732
Alignment:
Q  71 gagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaatttt-acaaaggaaatgagatagtgacacaaaaat 157  Q
    |||| |||||||||||||||| ||  || ||||||||| |||||||| ||||||||| |||||| ||||||| |||||||||||||||    
T  2571819 gagttgtgttatttgaacatccatgcatatgacaacttttgtgacaaccaaaattttaacaaagaaaatgaggtagtgacacaaaaat 2571732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 68 - 167
Target Start/End: Complemental strand, 18434981 - 18434882
Alignment:
Q  68 aaagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||||| |||||||||||| |||||| ||  ||||||||| |||||||| ||||||||| ||||| ||||||  || || ||||||||||||| |||||    
T  18434981 aaagagttgtgttatttgaaaatctatttagatgacaacttttgtgacaaccaaaattttgcaaagaaaatgatgtattggcacaaaaatcaaaacaata 18434882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 46907380 - 46907293
Alignment:
Q  69 aagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaa 156  Q
    |||||| |||||||||||||||| || |||  |||||||| || |||||||||||||||| |||| ||||||| || |||||||||||    
T  46907380 aagagttgtgttatttgaacatccatttatacgacaacttttgagacaatcaaaattttataaagaaaatgaggtattgacacaaaaa 46907293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 70 - 167
Target Start/End: Complemental strand, 31827135 - 31827038
Alignment:
Q  70 agagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||| ||||||||||||||||||| ||  ||||||||| ||  |||| ||||||||||||||  ||||||| || ||||||||||| |||| |||||    
T  31827135 agagttgtgttatttgaacatctatttagatgacaacttttgatacaaccaaaattttacaaaaaaaatgagttattgacacaaaaaccaaatcaata 31827038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 67 - 161
Target Start/End: Original strand, 51718514 - 51718604
Alignment:
Q  67 aaaagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaa 161  Q
    |||||||| ||||||||||||||||     |||||||||||| ||||| ||  |||| ||||||||||||||||  |||||||||||||||||||    
T  51718514 aaaagagttgtgttatttgaacatc----catgtgacaacttttgtgataactaaaactttacaaaggaaatgaagtagtgacacaaaaatcaaa 51718604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 101 - 167
Target Start/End: Complemental strand, 4776909 - 4776843
Alignment:
Q  101 gacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||||| |||||||||  |||||||| |||||||||||| ||||| |||||||||||||| ||||    
T  4776909 gacaacttttgtgacaatttaaattttataaaggaaatgaggtagtggcacaaaaatcaaagtaata 4776843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 77 - 167
Target Start/End: Original strand, 26020970 - 26021060
Alignment:
Q  77 tgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||||||||||||  || ||| ||||| ||| || ||||||||||||||||||||  ||| |||||| |||||||| ||||||| |||||    
T  26020970 tgttatttgaacattcatttatatgacatcttttgagacaatcaaaattttacaaaaaaaaagagatattgacacaataatcaaatcaata 26021060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 79 - 167
Target Start/End: Original strand, 15082947 - 15083034
Alignment:
Q  79 ttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||| ||||||  |||||||| | ||||| ||| ||||||||| |||||||||||||||||  || ||||||||||| ||||||||||    
T  15082947 ttattcgaacattcatatatgtcaaaacttttgt-acaatcaaacttttacaaaggaaatgaagtattgacacaaaaaccaaagcaata 15083034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 71 - 167
Target Start/End: Original strand, 15469945 - 15470040
Alignment:
Q  71 gagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||| |||||||||||||||  |||||||||| || || ||||||||| ||||||||| |||||||||||| ||||  | |||||| |||| |||||    
T  15469945 gagttgtgttatttgaacattcatatatgtgataattt-tgtgacaattaaaattttataaaggaaatgaggtagtagcgcaaaaaccaaaacaata 15470040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 71 - 167
Target Start/End: Original strand, 19947632 - 19947728
Alignment:
Q  71 gagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||| ||||||||||||||| ||| ||| ||||||||| || ||||| |||||||||| |||| ||| ||| || ||  ||||||| ||||||||||    
T  19947632 gagttgtgttatttgaacatttatttatatgacaacttttgagacaaccaaaattttataaagaaaaggaggtattgggacaaaaaccaaagcaata 19947728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 70 - 146
Target Start/End: Original strand, 30735180 - 30735256
Alignment:
Q  70 agagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagt 146  Q
    ||||| |||||||||||| ||| || ||||||| || || ||||||||||||||||||| |||| ||||||| ||||    
T  30735180 agagttgtgttatttgaatatccatgtatgtgataatttttgtgacaatcaaaattttataaagtaaatgaggtagt 30735256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 167
Target Start/End: Complemental strand, 3159521 - 3159463
Alignment:
Q  109 ctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||| |||| ||||||||||||||||||||||| ||||| ||||||||  |||||||||    
T  3159521 ctgtaacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaacaaaagcaata 3159463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 167
Target Start/End: Original strand, 9566846 - 9566944
Alignment:
Q  69 aagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||| |||||||||||||||  |  ||| ||||||||| || ||||| |||||||||||| || ||||  | || ||||||||||| ||||||||||    
T  9566846 aagagttgtgttatttgaacattcaattatatgacaacttttgagacaaccaaaattttacatagaaaatagggtattgacacaaaaaccaaagcaata 9566944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 77 - 167
Target Start/End: Original strand, 10627704 - 10627794
Alignment:
Q  77 tgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||||| ||||| ||| |||||||||| || || ||||| |||||||||| |||| ||||| | || ||| |||||||||||| |||||    
T  10627704 tgttatttcaacatatatctatgtgacaatttttgagacaaacaaaattttataaagaaaatgtggtattgatacaaaaatcaaaacaata 10627794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 167
Target Start/End: Complemental strand, 12657367 - 12657309
Alignment:
Q  110 tgtgacaatcaaaattttacaaaggaaatgagatagt-gacacaaaaatcaaagcaata 167  Q
    |||||||| |||||||||| |||||||||||| |||| |||||||||| ||||||||||    
T  12657367 tgtgacaaccaaaattttataaaggaaatgaggtagtggacacaaaaaccaaagcaata 12657309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 167
Target Start/End: Complemental strand, 6693301 - 6693244
Alignment:
Q  110 tgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||| |||||||||||||||||||||||||| || ||||| ||||| |||| |||||    
T  6693301 tgtgataatcaaaattttacaaaggaaatgaggtattgacataaaaaccaaaacaata 6693244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 167
Target Start/End: Complemental strand, 26208024 - 26207929
Alignment:
Q  71 gagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||| ||||||||||||||||||| ||  | | ||||| ||||| |||||||||||| ||||| ||||||  || |||||  |||||||||||||||    
T  26208024 gagttgtgttatttgaacatctatttagattataacttttgtgataatcaaaattttgcaaagaaaatgatgtattgaca-taaaatcaaagcaata 26207929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 107
Target Start/End: Original strand, 41677220 - 41677260
Alignment:
Q  67 aaaagagtcgtgttatttgaacatctatatatgtgacaact 107  Q
    |||||||| |||||||||||||||| |||||||||||||||    
T  41677220 aaaagagttgtgttatttgaacatccatatatgtgacaact 41677260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 120 - 167
Target Start/End: Original strand, 37985323 - 37985370
Alignment:
Q  120 aaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||||||| |||||||||||| ||||| ||||||||| |||||||||    
T  37985323 aaaattttataaaggaaatgaggtagtgtcacaaaaattaaagcaata 37985370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 167
Target Start/End: Original strand, 27533414 - 27533468
Alignment:
Q  113 gacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||| ||||||||||||||| ||||||| || ||||| |||||||||| |||||    
T  27533414 gacaaccaaaattttacaaagaaaatgaggtattgacataaaaatcaaaacaata 27533468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 167
Target Start/End: Complemental strand, 48261293 - 48261227
Alignment:
Q  101 gacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||||| || |||||||| | |||||||||||||| ||| || || |||||||| ||||||||||    
T  48261293 gacaacttttgagacaatcatatttttacaaaggaaaagaggtattggcacaaaaaccaaagcaata 48261227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 167
Target Start/End: Complemental strand, 48858957 - 48858911
Alignment:
Q  121 aaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||| ||||||| || | ||||||||||||||||||||||||||||    
T  48858957 aaattatacaaagaaatttagatagtgacacaaaaatcaaagcaata 48858911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 125
Target Start/End: Complemental strand, 50333395 - 50333337
Alignment:
Q  67 aaaagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaatt 125  Q
    |||||| | ||||||||| | |||| |||||||||||||||| |||||||| |||||||    
T  50333395 aaaagaattgtgttatttaaccatccatatatgtgacaacttttgtgacaaccaaaatt 50333337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 162
Target Start/End: Original strand, 51436612 - 51436658
Alignment:
Q  116 aatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaag 162  Q
    ||||||| |||||||||| ||| |||||| |||||||||||||||||    
T  51436612 aatcaaagttttacaaagaaaacgagatattgacacaaaaatcaaag 51436658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 166
Target Start/End: Complemental strand, 6809757 - 6809668
Alignment:
Q  77 tgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaat 166  Q
    ||||||||||||||| || ||| ||||||||| || ||||| |||||||||| | || |||||| | | |  ||||||||||||| ||||    
T  6809757 tgttatttgaacatccatttatatgacaacttttgggacaaccaaaattttatatagaaaatgatacattagcacaaaaatcaaaacaat 6809668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 138
Target Start/End: Original strand, 48103266 - 48103318
Alignment:
Q  86 aacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaat 138  Q
    ||||||||| ||| ||||||||| || ||||| ||||||||||||||| ||||    
T  48103266 aacatctatttatatgacaacttttgagacaaccaaaattttacaaagaaaat 48103318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 71 - 167
Target Start/End: Original strand, 51571234 - 51571330
Alignment:
Q  71 gagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||| |||||||||||||| | || |   |||||| || || ||||| || |||||||||||| ||| ||| || ||||||||||| ||||||||||    
T  51571234 gagttgtgttatttgaacaaccatttgattgacaatttttgggacaaccataattttacaaagaaaaagaggtattgacacaaaaaccaaagcaata 51571330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 69; Significance: 5e-31; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 71 - 167
Target Start/End: Original strand, 4054174 - 4054270
Alignment:
Q  71 gagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||| ||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||| |||||||| |||||||||||||| ||||||||||    
T  4054174 gagttgtgttatttgaacatttatatatgtgacaacttttgtgacaatcaaaactttacaaatgaaatgaggtagtgacacaaaaaccaaagcaata 4054270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 77 - 167
Target Start/End: Original strand, 12898823 - 12898913
Alignment:
Q  77 tgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||||| | |||||| ||||||||||    
T  12898823 tgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgagatagtggcgcaaaaaccaaagcaata 12898913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 69 - 167
Target Start/End: Complemental strand, 27325943 - 27325845
Alignment:
Q  69 aagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||| |||||||||||||||| ||||||||||||||||  |||| |||||||||||||||||||||||||| ||||| |||||||| ||||||||||    
T  27325943 aagagttgtgttatttgaacatccatatatgtgacaactttcgtgataatcaaaattttacaaaggaaatgaggtagtggcacaaaaaccaaagcaata 27325845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 70 - 167
Target Start/End: Complemental strand, 34186791 - 34186694
Alignment:
Q  70 agagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||| |||||||||||||||| ||| |||||||||||| |||||||||||||||||| ||||||||||||| |||||||||||||| ||||| ||||    
T  34186791 agagttgtgttatttgaacatccatacatgtgacaacttttgtgacaatcaaaattttgcaaaggaaatgaggtagtgacacaaaaaccaaagtaata 34186694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 71 - 167
Target Start/End: Complemental strand, 7272033 - 7271937
Alignment:
Q  71 gagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||| ||||||| |||||||| ||| |||||||||||| |||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||    
T  7272033 gagttgtgttatatgaacatccatacatgtgacaacttttgtgacaatcaaaattttgcaaaagaaatgagatagtgacacaaaaaccaaagcaata 7271937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 76 - 167
Target Start/End: Original strand, 32501089 - 32501180
Alignment:
Q  76 gtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||||||||||||| |||||||||| || || |||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  32501089 gtgttatttgaacatccatatatgtgagaatttttgtgacaaccaaaattttacaaaggaaatgaggtagtgacacaaaaatcaaagtaata 32501180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 67 - 167
Target Start/End: Original strand, 37449309 - 37449409
Alignment:
Q  67 aaaagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaat 166  Q
    |||||||| |||||||||||| ||| |||||||||| ||||| ||||| |||||||||||||||||||||||||| ||||  |||||||| |||||||||    
T  37449309 aaaagagttgtgttatttgaatatccatatatgtgataacttttgtgataatcaaaattttacaaaggaaatgaggtagtagcacaaaaaccaaagcaat 37449408  T
Q  167 a 167  Q
    |    
T  37449409 a 37449409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 77 - 156
Target Start/End: Original strand, 5277393 - 5277472
Alignment:
Q  77 tgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaa 156  Q
    ||||||||||||||| ||| ||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||||    
T  5277393 tgttatttgaacatccatacatgtgacaatttatgtgacaatcaaaattttacaaaggaaatgaggtagtgacacaaaaa 5277472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 76 - 167
Target Start/End: Original strand, 36816509 - 36816600
Alignment:
Q  76 gtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||| ||||||  || | ||||||||||||||||||||    
T  36816509 gtgttatttgaacatctatatatgtgacaacttttgtgataatcaaaattttgcaaagaaaatgacgtattaacacaaaaatcaaagcaata 36816600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 77 - 155
Target Start/End: Complemental strand, 36251503 - 36251425
Alignment:
Q  77 tgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaa 155  Q
    ||||||||||||||| |||||||||| |||||  ||||||||||||||||||||||||||||||| |||||||||||||    
T  36251503 tgttatttgaacatccatatatgtgataactttcgtgacaatcaaaattttacaaaggaaatgaggtagtgacacaaaa 36251425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 71 - 167
Target Start/End: Complemental strand, 42768387 - 42768291
Alignment:
Q  71 gagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||| |||||||||||||||| |||||||||| || || ||||||||  ||||||||||||||||||||||  ||||||||||||| ||||||||||    
T  42768387 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaactaaaattttacaaaggaaatgaggcagtgacacaaaaaccaaagcaata 42768291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 68 - 167
Target Start/End: Original strand, 37133747 - 37133846
Alignment:
Q  68 aaagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||||| ||||||||| |||||| || ||  ||||||||| |||||||| ||||||||||||||| |||||| ||| ||||||||||||||||||||||    
T  37133747 aaagagttgtgttattttaacatccatttagatgacaacttttgtgacaaccaaaattttacaaagaaaatgatatattgacacaaaaatcaaagcaata 37133846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 70 - 167
Target Start/End: Original strand, 11253429 - 11253526
Alignment:
Q  70 agagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||| || ||||||||||||||||| || ||||||||| |||||| | ||||||||||||||| ||||||| || ||||||||||| ||||||||||    
T  11253429 agagttgtattatttgaacatctataaatatgacaacttttgtgacgaccaaaattttacaaagaaaatgaggtattgacacaaaaaccaaagcaata 11253526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 71 - 167
Target Start/End: Complemental strand, 22719623 - 22719527
Alignment:
Q  71 gagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||| |||||||||||||| | |||||||||||||||| ||||| || ||||||||||||||| ||||||| ||||  |||||||| ||||||||||    
T  22719623 gagttgtgttatttgaacagccatatatgtgacaacttttgtgataaccaaaattttacaaagaaaatgaggtagttgcacaaaaaccaaagcaata 22719527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 67 - 167
Target Start/End: Complemental strand, 43397968 - 43397868
Alignment:
Q  67 aaaagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaat 166  Q
    |||||||  |||||| ||||||||| ||| |||||||| ||| |||||||| ||||||||||||||| ||||||||||||| |||||||| ||||| |||    
T  43397968 aaaagagatgtgttaattgaacatccatacatgtgacagcttttgtgacaaccaaaattttacaaagaaaatgagatagtggcacaaaaaccaaagtaat 43397869  T
Q  167 a 167  Q
    |    
T  43397868 a 43397868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 70 - 167
Target Start/End: Complemental strand, 29025444 - 29025347
Alignment:
Q  70 agagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||| ||||||||| |||||| || ||| ||||||||| || ||||| ||||||||||||||| ||||||| || ||||||||||| ||||||||||    
T  29025444 agagttgtgttatttaaacatccatttatatgacaacttttgggacaaccaaaattttacaaagaaaatgaggtattgacacaaaaaccaaagcaata 29025347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 76 - 167
Target Start/End: Original strand, 36660343 - 36660434
Alignment:
Q  76 gtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||||||||||||| ||| |||||| ||||| ||||||||||||||||||| |||| ||||||  || |||||||| || ||||||||||    
T  36660343 gtgttatttgaacatccataaatgtgataacttttgtgacaatcaaaattttataaagaaaatgaagtattgacacaataaccaaagcaata 36660434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 110 - 167
Target Start/End: Complemental strand, 10731690 - 10731633
Alignment:
Q  110 tgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||||||||||||||||||||||||||||  || ||||||||||||||||||||||    
T  10731690 tgtgacaatcaaaattttacaaaggaaatgaagtattgacacaaaaatcaaagcaata 10731633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 70 - 134
Target Start/End: Complemental strand, 10692615 - 10692551
Alignment:
Q  70 agagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaagg 134  Q
    ||||| || ||||||||||||| ||||||||| |||||||| |||||||||||||||||||||||    
T  10692615 agagttgtattatttgaacatccatatatgtgtcaacttctctgacaatcaaaattttacaaagg 10692551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 70 - 154
Target Start/End: Complemental strand, 24479407 - 24479323
Alignment:
Q  70 agagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaa 154  Q
    ||||| ||||||||||| |||  |||||| ||| ||||| ||||||||  ||||||||||||||||||||||||| |||||||||    
T  24479407 agagttgtgttatttgagcattcatatatatgataacttttgtgacaactaaaattttacaaaggaaatgagatattgacacaaa 24479323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 110 - 167
Target Start/End: Original strand, 31249451 - 31249508
Alignment:
Q  110 tgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||||| ||||||||||||||||||||||| |||||  ||||||| ||||||||||    
T  31249451 tgtgacaaccaaaattttacaaaggaaatgaggtagtggtacaaaaaccaaagcaata 31249508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 67 - 167
Target Start/End: Complemental strand, 13106667 - 13106567
Alignment:
Q  67 aaaagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaat 166  Q
    |||||||| |||||||||||||| | || || |||||||||| | | |||| || || ||||||||| ||| ||| || ||||||||||| |||||||||    
T  13106667 aaaagagttgtgttatttgaacaaccatttaggtgacaacttttataacaaccataaatttacaaagaaaaagaggtattgacacaaaaagcaaagcaat 13106568  T
Q  167 a 167  Q
    |    
T  13106567 a 13106567  T

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Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 140
Target Start/End: Original strand, 34084998 - 34085056
Alignment:
Q  82 tttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatga 140  Q
    |||||| |||| ||||||||||||||||||  ||||||||||||||| ||| |||||||    
T  34084998 tttgaatatctctatatgtgacaacttctgaaacaatcaaaattttataaaagaaatga 34085056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 167
Target Start/End: Original strand, 5600924 - 5600970
Alignment:
Q  121 aaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||||||||||| || | |||| |||||||||||||||||||||||    
T  5600924 aaattttacaaagaaatttagatggtgacacaaaaatcaaagcaata 5600970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 167
Target Start/End: Complemental strand, 5639696 - 5639650
Alignment:
Q  121 aaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||||||||||| || | |||| |||||||||||||||||||||||    
T  5639696 aaattttacaaagaaatttagatggtgacacaaaaatcaaagcaata 5639650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 167
Target Start/End: Original strand, 10839368 - 10839466
Alignment:
Q  69 aagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||| |||||||||||||||| || | | ||| || || || |||||  |||||||||||||| |||| | ||| || |||||||| ||||||||||    
T  10839368 aagagtagtgttatttgaacatccatttttatgataatttttgagacaactaaaattttacaaagaaaattaaatattggcacaaaaaccaaagcaata 10839466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 77 - 167
Target Start/End: Complemental strand, 34639710 - 34639620
Alignment:
Q  77 tgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||||||||||||| || ||  ||| || || || || |||||||||||||||||  ||||||| ||||||||||| || ||||| ||||    
T  34639710 tgttatttgaacatccatttacatgataatttttgagagaatcaaaattttacaaataaaatgaggtagtgacacaataaccaaagtaata 34639620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 106
Target Start/End: Original strand, 31249422 - 31249459
Alignment:
Q  69 aagagtcgtgttatttgaacatctatatatgtgacaac 106  Q
    |||||| |||||||||||||||| ||||||||||||||    
T  31249422 aagagttgtgttatttgaacatccatatatgtgacaac 31249459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 71 - 167
Target Start/End: Original strand, 23754594 - 23754690
Alignment:
Q  71 gagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||| |||||||||||||||   | ||| ||||||| | ||  |||| ||||||||||||||| |||||||  | ||||||||||| |||| |||||    
T  23754594 gagttgtgttatttgaacattattttatatgacaacctttgcaacaaccaaaattttacaaagaaaatgagtgattgacacaaaaaccaaaacaata 23754690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 165
Target Start/End: Complemental strand, 44061851 - 44061807
Alignment:
Q  121 aaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaa 165  Q
    ||||| ||||||| || | ||||||||||||||||||||||||||    
T  44061851 aaattatacaaagaaatttagatagtgacacaaaaatcaaagcaa 44061807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 5e-31; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 71 - 167
Target Start/End: Original strand, 38956506 - 38956602
Alignment:
Q  71 gagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||| |||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||| ||||| |||||||| ||||||||||    
T  38956506 gagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaaacaaagcaata 38956602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 70 - 167
Target Start/End: Original strand, 24614203 - 24614300
Alignment:
Q  70 agagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||| |||||||||||||||  |||||||||| ||||| ||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  24614203 agagttgtgttatttgaacattcatatatgtgataacttttgtgataatcaaaattttacaaaggaaatgaggtagtgacacaaaaaccaaagcaata 24614300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 70 - 167
Target Start/End: Original strand, 40112841 - 40112938
Alignment:
Q  70 agagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||| |||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||| || ||||| |||||||| ||||||||||    
T  40112841 agagttgtgttatttgaacatccatatatgtaacaacttctctgacaatcaaaattttacaaaggaaataaggtagtggcacaaaaaccaaagcaata 40112938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 70 - 167
Target Start/End: Complemental strand, 43025524 - 43025427
Alignment:
Q  70 agagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||| |||||||| |||||||||||||||||||||||| ||| ||||  |||||||||||||||||||||||||||| |||||||| ||||||||||    
T  43025524 agagttgtgttattcgaacatctatatatgtgacaacttttgtaacaactaaaattttacaaaggaaatgagatagtggcacaaaaaccaaagcaata 43025427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 77 - 167
Target Start/End: Original strand, 44895466 - 44895556
Alignment:
Q  77 tgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||||||||||||| |||||||| ||||||| |||||||| ||||||||||||||||||||||| ||||| |||||||| ||||||||||    
T  44895466 tgttatttgaacatccatatatgtaacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaaccaaagcaata 44895556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 76 - 167
Target Start/End: Original strand, 32529749 - 32529840
Alignment:
Q  76 gtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||||||||| |||| ||||||||||||| || |||||||||||||||||||||||||||||||| |||||| | ||||| ||||||||||    
T  32529749 gtgttatttgagcatccatatatgtgacaatttttgtgacaatcaaaattttacaaaggaaatgaggtagtgataaaaaaaccaaagcaata 32529840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 79 - 167
Target Start/End: Original strand, 22918065 - 22918153
Alignment:
Q  79 ttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||||| |||| ||| |||||||||||| || ||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||    
T  22918065 ttatttgagcatccatacatgtgacaacttttgcgacaatcaaaattttacaaaggaaatgaggtagtggcacaaaaaccaaagcaata 22918153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 68 - 167
Target Start/End: Original strand, 3937008 - 3937107
Alignment:
Q  68 aaagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||||| |||||||||||||||| ||| |||||||||||| |||||||| |||||||||| |||||||||||| || || |||||||| ||||| ||||    
T  3937008 aaagagttgtgttatttgaacatccatacatgtgacaacttttgtgacaaccaaaattttataaaggaaatgaggtattggcacaaaaaccaaagtaata 3937107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 70 - 167
Target Start/End: Original strand, 41189428 - 41189527
Alignment:
Q  70 agagtcgtgttatttgaacatc--tatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||| |||||||||||||||   ||||||||||| ||||| | |||||||||||||||||||||||||||||| || |||||||||||  |||||||||    
T  41189428 agagttgtgttatttgaacattcatatatatgtgataacttttatgacaatcaaaattttacaaaggaaatgaggtattgacacaaaaactaaagcaata 41189527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 68 - 167
Target Start/End: Original strand, 25192802 - 25192901
Alignment:
Q  68 aaagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||||| |||||||||||| ||  ||| |||||||||||| ||||||||  |||||||||||||| ||||||| |||||||||||||| |||| |||||    
T  25192802 aaagagttgtgttatttgaatattcatacatgtgacaacttttgtgacaactaaaattttacaaagaaaatgaggtagtgacacaaaaaccaaaacaata 25192901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 71 - 167
Target Start/End: Original strand, 41989628 - 41989726
Alignment:
Q  71 gagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttac--aaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||| |||||||||||||||| |||||||||| ||||| |||||||| |||||||||||  |||  ||||||| ||||| |||||||| ||||||||||    
T  41989628 gagttgtgttatttgaacatccatatatgtgataacttttgtgacaaccaaaattttacaaaaaaaaaatgaggtagtggcacaaaaaccaaagcaata 41989726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 70 - 167
Target Start/End: Original strand, 35072249 - 35072346
Alignment:
Q  70 agagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||| ||||||| |||||||| || ||| ||||||||| ||  |||| |||||||||| |||| |||||||| | ||||||||||||||||||||||    
T  35072249 agagttgtgttatctgaacatccatttatatgacaacttttgaaacaaccaaaattttataaagaaaatgagacattgacacaaaaatcaaagcaata 35072346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 71 - 167
Target Start/End: Complemental strand, 40417957 - 40417861
Alignment:
Q  71 gagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||| ||||||||||||||||||| |||  |||||||| || ||||| ||||||||||||||| || |||| || ||||| ||||| ||||||||||    
T  40417957 gagttgtgttatttgaacatctatttatacgacaacttttgagacaaccaaaattttacaaagaaagtgaggtattgacataaaaaccaaagcaata 40417861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 96 - 167
Target Start/End: Original strand, 44189223 - 44189294
Alignment:
Q  96 tatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||||| ||||| |||||||||||||| ||| ||||||||||||| |||||||||||||| ||||| ||||    
T  44189223 tatgtgataacttttgtgacaatcaaaaattttcaaaggaaatgagttagtgacacaaaaaccaaagtaata 44189294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 69 - 156
Target Start/End: Original strand, 46022153 - 46022240
Alignment:
Q  69 aagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaa 156  Q
    |||||| |||||||||||||||| || ||| ||||||||| || ||||| |||||||||| |||| ||||||| || |||||||||||    
T  46022153 aagagttgtgttatttgaacatccatttatatgacaacttttgagacaaccaaaattttataaagaaaatgaggtattgacacaaaaa 46022240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 71 - 167
Target Start/End: Original strand, 45851095 - 45851188
Alignment:
Q  71 gagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||| |||||||||||||||| |||| ||| |||| || | ||||||  |||||||||||||||||||||   ||||||||||||| ||||||||||    
T  45851095 gagttgtgttatttgaacatccatatctgtcacaatttttttgacaactaaaattttacaaaggaaatga---agtgacacaaaaaccaaagcaata 45851188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 70 - 167
Target Start/End: Complemental strand, 31445502 - 31445405
Alignment:
Q  70 agagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||| ||||||||||||||||  | ||| ||| || || ||  |||||||||||||||||||| |||||||  | ||||||||||||||||||||||    
T  31445502 agagttgtgttatttgaacatcattttatatgataatttttgcaacaatcaaaattttacaaagaaaatgagtgattgacacaaaaatcaaagcaata 31445405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 70 - 167
Target Start/End: Original strand, 35098590 - 35098687
Alignment:
Q  70 agagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||| |||||||||||| ||| || ||| ||||||||| ||  |||| |||||||||| | || |||||||| | ||||||||||||||||||||||    
T  35098590 agagttgtgttatttgaatatccatttatatgacaacttttgaaacaaccaaaattttatatagaaaatgagacattgacacaaaaatcaaagcaata 35098687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 68 - 141
Target Start/End: Complemental strand, 43942818 - 43942745
Alignment:
Q  68 aaagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgag 141  Q
    ||||||| |||||||||||||||| |||||||||| || || |||| ||| ||||||||||||||| |||||||    
T  43942818 aaagagttgtgttatttgaacatccatatatgtgataatttttgtggcaaccaaaattttacaaagaaaatgag 43942745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 79 - 167
Target Start/End: Original strand, 46578031 - 46578119
Alignment:
Q  79 ttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||||||||||| |||||||||| || |||| |||||| |||||||||| ||| |||| ||| || || ||||||||||||| |||||    
T  46578031 ttatttgaacatccatatatgtgataatttctatgacaaccaaaattttataaaagaaacgaggtattggcacaaaaatcaaatcaata 46578119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 7701729 - 7701642
Alignment:
Q  69 aagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaa 156  Q
    |||||| |||||||||||||||| || ||| ||||||||| || ||||| |||| ||||| |||| ||||||| || |||||||||||    
T  7701729 aagagttgtgttatttgaacatccatttatatgacaacttttgagacaaccaaagttttataaagaaaatgaggtattgacacaaaaa 7701642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 76 - 167
Target Start/End: Original strand, 47391218 - 47391309
Alignment:
Q  76 gtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||| ||||||||  |||||||| | ||||| |  ||||||||| |||||| ||||||||||| ||| |||||||||||||||| |||||    
T  47391218 gtgttagttgaacattcatatatgtaataacttttaagacaatcaatattttataaaggaaatgaaatattgacacaaaaatcaaaacaata 47391309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 110 - 167
Target Start/End: Complemental strand, 38073364 - 38073307
Alignment:
Q  110 tgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||||| ||||||||||||||||||||||| || || |||||||| ||||||||||    
T  38073364 tgtgacaaccaaaattttacaaaggaaatgaggtattggcacaaaaaccaaagcaata 38073307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 167
Target Start/End: Original strand, 41863535 - 41863613
Alignment:
Q  89 atctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||| ||| ||||||||| |  ||||||||||||||||||||  ||||||| || || |||||||| ||||||||||    
T  41863535 atctatttatatgacaacttttaagacaatcaaaattttacaaataaaatgaggtattggcacaaaaaacaaagcaata 41863613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 167
Target Start/End: Complemental strand, 48062242 - 48062144
Alignment:
Q  69 aagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||| ||||||||||||||||  | |  |||| || || || |||||||||||||||| |||| ||||||| || ||||||||||| |||| |||||    
T  48062242 aagagttgtgttatttgaacatccgtttgagtgataatttttgagacaatcaaaattttataaagaaaatgaggtattgacacaaaaaccaaaacaata 48062144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 167
Target Start/End: Complemental strand, 38861240 - 38861183
Alignment:
Q  110 tgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||||||||||||||||||||| |||| || ||||| |||||||| |||| |||||    
T  38861240 tgtgacaatcaaaattttacaaagtaaataaggtagtggcacaaaaaccaaaacaata 38861183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 70 - 167
Target Start/End: Complemental strand, 41018848 - 41018751
Alignment:
Q  70 agagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||| |||||||||||| | |||| || |||||||||| | ||||||||| || ||||||||| ||| ||| || | ||||||||| ||||| ||||    
T  41018848 agagttgtgttatttgaataactatttaggtgacaacttttatgacaatcataaatttacaaagaaaaagaggtattaacacaaaaaccaaagtaata 41018751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 167
Target Start/End: Original strand, 12007079 - 12007169
Alignment:
Q  77 tgttatttgaacatctatatat-gtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||||||| ||| |||| ||| |||||||||| |  ||||| |||| |||||||||| || | |||||||| |||||||||||||||||||    
T  12007079 tgttatttgtacaactatttattgtgacaacttgttggacaaccaaa-ttttacaaagaaatttagatagtggcacaaaaatcaaagcaata 12007169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 167
Target Start/End: Original strand, 22925215 - 22925268
Alignment:
Q  114 acaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||| ||||||||||||| | |||| ||||| |||||||||||| |||||||||    
T  22925215 acaaccaaaattttacaaggaaaataagatattgacacaaaaattaaagcaata 22925268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 133
Target Start/End: Original strand, 3614340 - 3614396
Alignment:
Q  77 tgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaag 133  Q
    ||||||||||||||| || ||| ||||||||| ||  |||| |||||||||||||||    
T  3614340 tgttatttgaacatccatttatatgacaacttttgaaacaaccaaaattttacaaag 3614396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 5e-31; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 71 - 167
Target Start/End: Complemental strand, 552976 - 552880
Alignment:
Q  71 gagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||| |||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||| ||||| |||||||| ||||||||||    
T  552976 gagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaaccaaagcaata 552880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 70 - 167
Target Start/End: Original strand, 32316815 - 32316912
Alignment:
Q  70 agagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||| |||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||| ||||||| || ||||||||||| ||||||||||    
T  32316815 agagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaagaaaatgaggtactgacacaaaaaccaaagcaata 32316912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 68 - 167
Target Start/End: Complemental strand, 15974794 - 15974695
Alignment:
Q  68 aaagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||||| |||||||||||||||| |||||||| ||||||| |||||||| ||||||||||||||||||||||  |||| ||||||||| ||||||||||    
T  15974794 aaagagttgtgttatttgaacatccatatatgtaacaacttttgtgacaaccaaaattttacaaaggaaatgaagtagtaacacaaaaaccaaagcaata 15974695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 68 - 163
Target Start/End: Original strand, 33430247 - 33430342
Alignment:
Q  68 aaagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagc 163  Q
    ||||||| |||||||||| ||||  |||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||| ||||||    
T  33430247 aaagagttgtgttatttggacattcatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtgacacaaaaaccaaagc 33430342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 70 - 167
Target Start/End: Complemental strand, 1156904 - 1156807
Alignment:
Q  70 agagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||| |||||||||||||||| |||||| ||| ||||| ||||||||||||||||||  |||||||||||||||||| |||||||| ||||| ||||    
T  1156904 agagttgtgttatttgaacatccatatatttgataacttttgtgacaatcaaaattttgtaaaggaaatgagatagtggcacaaaaaccaaagtaata 1156807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 71 - 167
Target Start/End: Complemental strand, 14818115 - 14818019
Alignment:
Q  71 gagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||| ||||||||||||||| ||||||| ||||||||| |||||||| |||||||||| |||||||||||| ||||| |||||||| |||| |||||    
T  14818115 gagttgtgttatttgaacatttatatatatgacaacttttgtgacaaccaaaattttagaaaggaaatgaggtagtggcacaaaaaccaaaacaata 14818019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 68 - 167
Target Start/End: Complemental strand, 34047573 - 34047474
Alignment:
Q  68 aaagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||||  ||||||||||||||| ||| |||||||||||| |||||||| ||||||||||||||| ||| |||||| || |||||||| ||||||||||    
T  34047573 aaagagttttgttatttgaacatccataaatgtgacaacttttgtgacaaccaaaattttacaaagaaaaagagatattggcacaaaaaccaaagcaata 34047474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 71 - 167
Target Start/End: Original strand, 13689882 - 13689978
Alignment:
Q  71 gagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||| |||||||||||||||| ||||||||||||| || |  |||||  ||||||||| |||||||||||| || ||||||||||||||||||||||    
T  13689882 gagttgtgttatttgaacatccatatatgtgacaatttttacgacaactaaaattttataaaggaaatgaggtattgacacaaaaatcaaagcaata 13689978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 71 - 167
Target Start/End: Complemental strand, 31077977 - 31077881
Alignment:
Q  71 gagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||| |||||||||||| ||  ||| |||||||||||| |||||||| |||||||||||||||||| |||| |||||||||||||| |||| |||||    
T  31077977 gagttgtgttatttgaatattcatacatgtgacaacttttgtgacaaccaaaattttacaaaggaagtgaggtagtgacacaaaaaccaaaacaata 31077881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 76 - 167
Target Start/End: Original strand, 18737460 - 18737551
Alignment:
Q  76 gtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||||||||||||| || ||||||||||||| |||||||| ||||||||||||||| ||||||| || || |||||||| |||| |||||    
T  18737460 gtgttatttgaacatccatgtatgtgacaacttttgtgacaaccaaaattttacaaagaaaatgaggtattgtcacaaaaaccaaaacaata 18737551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 68 - 167
Target Start/End: Complemental strand, 26595535 - 26595436
Alignment:
Q  68 aaagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||||| |||||||||||||||| || ||| ||||||||| ||  |||| ||||||||||||||| ||||||| || ||||||||||| ||||||||||    
T  26595535 aaagagttgtgttatttgaacatccatttatatgacaacttttgaaacaaccaaaattttacaaagaaaatgaggtattgacacaaaaaccaaagcaata 26595436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 69 - 167
Target Start/End: Complemental strand, 4820552 - 4820454
Alignment:
Q  69 aagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||| |||||||||||||| |||| ||  ||| ||||| || ||||||||||||||||||||| |||||||  | ||||||||||||||||||||||    
T  4820552 aagagttgtgttatttgaacaactatttacatgataacttttgagacaatcaaaattttacaaagaaaatgaggcattgacacaaaaatcaaagcaata 4820454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 71 - 167
Target Start/End: Original strand, 5694039 - 5694135
Alignment:
Q  71 gagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||| ||||||||| |||||  || ||||||||||||| || ||||| | ||||||||||||||||||||| || |||||||||||||||| |||||    
T  5694039 gagttgtgttatttaaacattcatgtatgtgacaacttttgagacaacctaaattttacaaaggaaatgaggtattgacacaaaaatcaaaacaata 5694135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 71 - 167
Target Start/End: Original strand, 22079451 - 22079547
Alignment:
Q  71 gagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||| |||||||||||||||| || ||  |||| |||| |||||||| ||||||||| ||||| ||||||  || ||||||||||||||||||||||    
T  22079451 gagttgtgttatttgaacatccatttagatgaccacttttgtgacaaccaaaattttgcaaagaaaatgatgtattgacacaaaaatcaaagcaata 22079547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 100 - 167
Target Start/End: Complemental strand, 277145 - 277078
Alignment:
Q  100 tgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||| || |||||||| ||||||||||||||| |||||| ||| ||||||||||||||||||||||    
T  277145 tgacaatttttgtgacaaccaaaattttacaaagaaaatgatatattgacacaaaaatcaaagcaata 277078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 76 - 167
Target Start/End: Complemental strand, 11612366 - 11612275
Alignment:
Q  76 gtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||||||||| || ||||||||||| || || ||||| |||||||||||||||||| ||||||| || |  ||||||||| |||||||||    
T  11612366 gtgttatttgaatatttatatatgtgataatttttgtgataatcaaaattttacaaagaaaatgaggtatttgcacaaaaattaaagcaata 11612275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 16199635 - 16199548
Alignment:
Q  69 aagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaa 156  Q
    |||||| |||||||||||||||| || ||| ||||||||| || ||||| |||||||||| |||| ||||||| || |||||||||||    
T  16199635 aagagttgtgttatttgaacatccatttatatgacaacttttgagacaaccaaaattttataaagaaaatgaggtattgacacaaaaa 16199548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 82 - 167
Target Start/End: Original strand, 3853206 - 3853291
Alignment:
Q  82 tttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||||||  || ||| ||||||||| || |||||  || ||||||||||| |||||||||| ||||||||||||||||||||||    
T  3853206 tttgaacattcatttatatgacaacttttgagacaacaaagattttacaaagaaaatgagatattgacacaaaaatcaaagcaata 3853291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 71 - 167
Target Start/End: Original strand, 33603168 - 33603264
Alignment:
Q  71 gagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||| ||||| |||||||||| || ||| ||||||||| |  ||   |||||||||||||||| ||||||| || ||||||||||||||||||||||    
T  33603168 gagttgtgttttttgaacatccatttatatgacaacttttaagattgtcaaaattttacaaagaaaatgaggtattgacacaaaaatcaaagcaata 33603264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 76 - 167
Target Start/End: Original strand, 30423445 - 30423536
Alignment:
Q  76 gtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||||||||||||||||| ||||||| ||||| ||  |||||||||  |||| |||| ||||||| || ||| |||||| |||||||||||    
T  30423445 gtgttatttgaacatctatttatgtgataacttttgatacaatcaaagctttataaagaaaatgaggtattgatacaaaattcaaagcaata 30423536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 100 - 150
Target Start/End: Original strand, 5570255 - 5570305
Alignment:
Q  100 tgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgaca 150  Q
    ||||||||| | ||||||| |||||||||||||||||||||||||||||||    
T  5570255 tgacaacttttatgacaattaaaattttacaaaggaaatgagatagtgaca 5570305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 110 - 167
Target Start/End: Original strand, 5080494 - 5080551
Alignment:
Q  110 tgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||| || ||||||||||||||||||||||| ||||||||||||||  |||||||||    
T  5080494 tgtgataaccaaaattttacaaaggaaatgaggtagtgacacaaaaactaaagcaata 5080551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 110 - 167
Target Start/End: Original strand, 8098524 - 8098581
Alignment:
Q  110 tgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||||| |||||||||| ||||||||| || |||||||||||||| ||||||||||    
T  8098524 tgtgacaaccaaaattttagaaaggaaataaggtagtgacacaaaaaccaaagcaata 8098581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 83 - 167
Target Start/End: Original strand, 11014890 - 11014974
Alignment:
Q  83 ttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||||||||| ||| ||| ||||| || ||||||||||||||||  ||| ||||||| || |||||||||||| ||| |||||    
T  11014890 ttgaacatctatttatatgataacttttgagacaatcaaaattttatgaagaaaatgaggtattgacacaaaaattaaatcaata 11014974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 167
Target Start/End: Complemental strand, 24900960 - 24900861
Alignment:
Q  68 aaagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||||| ||||||||||||||||  | ||| ||||||| | ||  ||||| |||||||||||||| |||||||  | || |||||||| ||||||||||    
T  24900960 aaagagttgtgttatttgaacatcattttatatgacaacatttgcaacaattaaaattttacaaagaaaatgagtgattggcacaaaaaccaaagcaata 24900861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 167
Target Start/End: Original strand, 31883189 - 31883287
Alignment:
Q  69 aagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||| || ||||||||||| |||| |   |||||| || || ||||| || |||||||||||| ||| ||| |  ||||||||||||||||||||||    
T  31883189 aagagttgtattatttgaacaactatttgattgacaatttttgggacaaccataattttacaaagaaaaagaggtcttgacacaaaaatcaaagcaata 31883287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 71 - 167
Target Start/End: Original strand, 17551267 - 17551362
Alignment:
Q  71 gagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||| ||||||||||||||||||| | | ||||| | | |||||||| ||||| |||| |||| |||||||  | ||||||||||| |||| |||||    
T  17551267 gagttgtgttatttgaacatctatttttatgacagcatttgtgacaaccaaaa-tttataaagaaaatgagggattgacacaaaaaccaaaacaata 17551362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 68 - 167
Target Start/End: Original strand, 76504 - 76603
Alignment:
Q  68 aaagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||||| ||||||||| |||||| |||||||||||||||| |||||||| ||||||||||||||||||||||| ||||| |||||||| ||||||||||    
T  76504 aaagagttgtgttattttaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaaccaaagcaata 76603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 67; Significance: 8e-30; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 67 - 165
Target Start/End: Complemental strand, 8855 - 8757
Alignment:
Q  67 aaaagagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaa 165  Q
    |||||||| |||||||||||||||| |||||| ||||||||| | |||||| ||||||||||||||||||||||| |||||||||||||| ||||||||    
T  8855 aaaagagttgtgttatttgaacatccatatatctgacaacttttatgacaaccaaaattttacaaaggaaatgaggtagtgacacaaaaaccaaagcaa 8757  T

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Target: scaffold0098 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 77 - 161
Target Start/End: Complemental strand, 49472 - 49388
Alignment:
Q  77 tgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaa 161  Q
    ||||||||||||||| |||||||||||||||| ||||| || ||||||||||||||||||||||| |||||||||||||| ||||    
T  49472 tgttatttgaacatccatatatgtgacaacttttgtgataaccaaaattttacaaaggaaatgaggtagtgacacaaaaaccaaa 49388  T

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Target: scaffold0519 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 70 - 167
Target Start/End: Complemental strand, 11966 - 11869
Alignment:
Q  70 agagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    ||||| || ||||||||||||||||| || ||||||||| |||||| | ||||||||||||||| ||||||| || ||||||||||| ||||||||||    
T  11966 agagttgtattatttgaacatctataaatatgacaacttttgtgacgaccaaaattttacaaagaaaatgaggtattgacacaaaaaccaaagcaata 11869  T

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Target: scaffold0067 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 110 - 167
Target Start/End: Complemental strand, 35667 - 35610
Alignment:
Q  110 tgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaagcaata 167  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||    
T  35667 tgtgacaatcaaaattttacaaagaaaatgaggtagtgacacaaaaaccaaagcaata 35610  T

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Target: scaffold0041 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 161
Target Start/End: Original strand, 10890 - 10941
Alignment:
Q  110 tgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaatcaaa 161  Q
    ||||||||||||||||||| |||| ||||||| |||| ||||||||||||||    
T  10890 tgtgacaatcaaaattttataaagaaaatgaggtagtaacacaaaaatcaaa 10941  T

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Target: scaffold0087 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 156
Target Start/End: Original strand, 53249 - 53334
Alignment:
Q  71 gagtcgtgttatttgaacatctatatatgtgacaacttctgtgacaatcaaaattttacaaaggaaatgagatagtgacacaaaaa 156  Q
    |||| ||||||||||||||| ||| ||| ||| || || |  ||||| ||||| |||| |||| |||||||||| |||||||||||    
T  53249 gagttgtgttatttgaacatttatttatatgataagtttttagacaaccaaaaatttataaagaaaatgagatattgacacaaaaa 53334  T

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