View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7820_low_8 (Length: 336)

Name: NF7820_low_8
Description: NF7820
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7820_low_8
NF7820_low_8
[»] chr7 (25 HSPs)
chr7 (156-325)||(4783311-4783480)
chr7 (156-325)||(4815740-4815909)
chr7 (20-159)||(4783151-4783290)
chr7 (20-159)||(4815580-4815719)
chr7 (21-158)||(4654137-4654271)
chr7 (156-325)||(4644157-4644314)
chr7 (198-325)||(4653946-4654073)
chr7 (21-158)||(4711404-4711538)
chr7 (198-325)||(4711590-4711717)
chr7 (198-325)||(4845530-4845657)
chr7 (198-325)||(4637307-4637434)
chr7 (198-325)||(4696708-4696835)
chr7 (21-158)||(4644336-4644470)
chr7 (21-158)||(4845332-4845466)
chr7 (22-143)||(4637510-4637628)
chr7 (22-158)||(4673344-4673477)
chr7 (25-143)||(4663346-4663461)
chr7 (198-325)||(4864372-4864502)
chr7 (21-158)||(4864566-4864700)
chr7 (198-325)||(4673153-4673280)
chr7 (21-104)||(4696498-4696578)
chr7 (74-125)||(4667612-4667663)
chr7 (124-159)||(4696610-4696645)
chr7 (198-267)||(4631438-4631507)
chr7 (198-325)||(4667391-4667515)
[»] chr4 (1 HSPs)
chr4 (71-124)||(18925112-18925165)


Alignment Details
Target: chr7 (Bit Score: 154; Significance: 1e-81; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 156 - 325
Target Start/End: Original strand, 4783311 - 4783480
Alignment:
Q  156 caacccttcactttggcttcatcgtgatgagaatcatatcgtcaaagaatattccatccaaatcaaaccaaacgagaagctaaacataagtttcattccc 255  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  4783311 caacccttcactttggcttcatcatgatgagaatcatatcgtcaaagaatattccatccaaatcaaaccaaacgagaagctaaacataactttcattccc 4783410  T
Q  256 aacaacacaaaccaattgaatcctagttatgcttacattaacggaatcgaagttgtgtctatgccttctt 325  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  4783411 aacaacacaaaccaattgattcctagttatgctttcattaacggaatcgaagttgtgtctatgccttctt 4783480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 156 - 325
Target Start/End: Original strand, 4815740 - 4815909
Alignment:
Q  156 caacccttcactttggcttcatcgtgatgagaatcatatcgtcaaagaatattccatccaaatcaaaccaaacgagaagctaaacataagtttcattccc 255  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  4815740 caacccttcactttggcttcatcatgatgagaatcatatcgtcaaagaatattccatccaaatcaaaccaaacgagaagctaaacataactttcattccc 4815839  T
Q  256 aacaacacaaaccaattgaatcctagttatgcttacattaacggaatcgaagttgtgtctatgccttctt 325  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  4815840 aacaacacaaaccaattgagtcctagttatgctttcattaacggaatcgaagttgtgtctatgccttctt 4815909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 20 - 159
Target Start/End: Original strand, 4783151 - 4783290
Alignment:
Q  20 cctctctctcaaatttcacatactcattttctaacatcatcactaactccactatttttcttcgccttcatttttacccaacttcatatcaaaattttga 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4783151 cctctctctcaaatttcacatactcattttctaacatcatcactaactccactatttttcttcgccttcatttttacccaacttcatatcaaaattttga 4783250  T
Q  120 aacctcaaatgcacttttctctgttgaagtaaacaacaac 159  Q
    ||||||  ||||||||||||||||||||||||||||||||    
T  4783251 aacctcttatgcacttttctctgttgaagtaaacaacaac 4783290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 20 - 159
Target Start/End: Original strand, 4815580 - 4815719
Alignment:
Q  20 cctctctctcaaatttcacatactcattttctaacatcatcactaactccactatttttcttcgccttcatttttacccaacttcatatcaaaattttga 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4815580 cctctctctcaaatttcacatactcattttctaacatcatcactaactccactatttttcttcgccttcatttttacccaacttcatatcaaaattttga 4815679  T
Q  120 aacctcaaatgcacttttctctgttgaagtaaacaacaac 159  Q
    ||||||  ||||||||||||||||||||||||||||||||    
T  4815680 aacctcttatgcacttttctctgttgaagtaaacaacaac 4815719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 21 - 158
Target Start/End: Complemental strand, 4654271 - 4654137
Alignment:
Q  21 ctctctctcaaatttcacatactcattttctaacatcatcactaactccactatttttcttcgccttcatttttacccaacttcatatcaaaattttgaa 120  Q
    |||||||||| |||||||||||||||||||||||||||  |||   ||| || |||||   ||||||||||||||||| ||||| |||||||| ||||||    
T  4654271 ctctctctcatatttcacatactcattttctaacatcactact---tcccctgtttttaaccgccttcatttttaccctacttcgtatcaaaaatttgaa 4654175  T
Q  121 acctcaaatgcacttttctctgttgaagtaaacaacaa 158  Q
     |||||||||||||||||||||||||||||||||||||    
T  4654174 ccctcaaatgcacttttctctgttgaagtaaacaacaa 4654137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 156 - 325
Target Start/End: Complemental strand, 4644314 - 4644157
Alignment:
Q  156 caacccttcactttggcttcatcgtgatgagaatcatatcgtcaaagaatattccatccaaatcaaaccaaacgagaagctaaacataagtttcattccc 255  Q
    ||||||||||||||||||||||| |||||||||| ||||| ||||||| |||| ||||||||| ||| |||| |||||||||||||||| ||||||||||    
T  4644314 caacccttcactttggcttcatcatgatgagaataatatcatcaaagagtattgcatccaaattaaaacaaatgagaagctaaacataactttcattccc 4644215  T
Q  256 aacaacacaaaccaattgaatcctagttatgcttacattaacggaatcgaagttgtgtctatgccttctt 325  Q
     ||| ||           |||  ||||||||||| |||||||||||||||||||||||||||||||||||    
T  4644214 -acatca-----------aatgttagttatgctttcattaacggaatcgaagttgtgtctatgccttctt 4644157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 198 - 325
Target Start/End: Complemental strand, 4654073 - 4653946
Alignment:
Q  198 caaagaatattccatccaaatcaaaccaaacgagaagctaaacataagtttcattcccaacaacacaaaccaattgaatcctagttatgcttacattaac 297  Q
    ||||||||||| ||||||| || |||| ||  ||||||||||||||| |||||||||||||||||||||||| |  ||||||  |||||||| ||||||     
T  4654073 caaagaatattgcatccaagtccaaccgaataagaagctaaacataactttcattcccaacaacacaaaccattcaaatccttattatgctttcattaat 4653974  T
Q  298 ggaatcgaagttgtgtctatgccttctt 325  Q
    ||||| ||||||||||||||||||||||    
T  4653973 ggaattgaagttgtgtctatgccttctt 4653946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 21 - 158
Target Start/End: Original strand, 4711404 - 4711538
Alignment:
Q  21 ctctctctcaaatttcacatactcattttctaacatcatcactaactccactatttttcttcgccttcatttttacccaacttcatatcaaaattttgaa 120  Q
    |||||||||||||||||||||||||||||||| |||||   ||||| || || ||||| || ||||||||||||||||||||||||| ||||| |||||     
T  4711404 ctctctctcaaatttcacatactcattttctagcatca---ctaacacccctgtttttattagccttcatttttacccaacttcataccaaaactttgat 4711500  T
Q  121 acctcaaatgcacttttctctgttgaagtaaacaacaa 158  Q
     |||| ||||| |||||||||||  |||||||||||||    
T  4711501 ccctccaatgctcttttctctgtcaaagtaaacaacaa 4711538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 198 - 325
Target Start/End: Original strand, 4711590 - 4711717
Alignment:
Q  198 caaagaatattccatccaaatcaaaccaaacgagaagctaaacataagtttcattcccaacaacacaaaccaattgaatcctagttatgcttacattaac 297  Q
    ||||||||||| ||| |||||||||||||| |||||||||| ||||| ||||||||| ||||||| ||| || |  ||||||  |||||||| |||||||    
T  4711590 caaagaatattgcattcaaatcaaaccaaatgagaagctaagcataactttcattccaaacaacataaatcattcaaatccttattatgctttcattaac 4711689  T
Q  298 ggaatcgaagttgtgtctatgccttctt 325  Q
    ||||||||| ||||||||||||||||||    
T  4711690 ggaatcgaaattgtgtctatgccttctt 4711717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 198 - 325
Target Start/End: Original strand, 4845530 - 4845657
Alignment:
Q  198 caaagaatattccatccaaatcaaaccaaacgagaagctaaacataagtttcattcccaacaacacaaaccaattgaatcctagttatgcttacattaac 297  Q
    ||||||||||| ||| || ||||||||||| | |||||||||||||| |||| |||| ||||||| |||| |||||||||||  |||||||| | |||||    
T  4845530 caaagaatattgcattcagatcaaaccaaatgggaagctaaacataactttctttccgaacaacataaacgaattgaatcctttttatgctttcgttaac 4845629  T
Q  298 ggaatcgaagttgtgtctatgccttctt 325  Q
    ||||||||||||||||| ||||||||||    
T  4845630 ggaatcgaagttgtgtcgatgccttctt 4845657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 198 - 325
Target Start/End: Complemental strand, 4637434 - 4637307
Alignment:
Q  198 caaagaatattccatccaaatcaaaccaaacgagaagctaaacataagtttcattcccaacaacacaaaccaattgaatcctagttatgcttacattaac 297  Q
    ||||||||||| ||| |||||||||||||| || ||| ||||||||| ||||||||| |||| || ||||||||  |||||| |||||||||  ||||||    
T  4637434 caaagaatattgcatacaaatcaaaccaaatgaaaagttaaacataactttcattcctaacagcataaaccaatcaaatccttgttatgcttttattaac 4637335  T
Q  298 ggaatcgaagttgtgtctatgccttctt 325  Q
    || |||||||||||||| ||||||||||    
T  4637334 gggatcgaagttgtgtcaatgccttctt 4637307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 198 - 325
Target Start/End: Original strand, 4696708 - 4696835
Alignment:
Q  198 caaagaatattccatccaaatcaaaccaaacgagaagctaaacataagtttcattcccaacaacacaaaccaattgaatcctagttatgcttacattaac 297  Q
    ||||||||||| ||| |||| ||||||||| |||||| ||||||||| ||||||||||| ||||| |||||| |  ||||||  |||||||| |||||||    
T  4696708 caaagaatattgcattcaaaccaaaccaaatgagaagttaaacataactttcattcccagcaacataaaccagtcaaatccttattatgctttcattaac 4696807  T
Q  298 ggaatcgaagttgtgtctatgccttctt 325  Q
    ||||| ||||||||||| ||||||||||    
T  4696808 ggaatagaagttgtgtcaatgccttctt 4696835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 21 - 158
Target Start/End: Complemental strand, 4644470 - 4644336
Alignment:
Q  21 ctctctctcaaatttcacatactcattttctaacatcatcactaactccactatttttcttcgccttcatttttacccaacttcatatcaaaattttgaa 120  Q
    |||| |||||||||| |||||||||||||||| |||||   ||   ||| || |||||||||||||| ||||||||||  | || |||||||||||||||    
T  4644470 ctctttctcaaattttacatactcattttctagcatca---ctgtttcccctgtttttcttcgcctttatttttaccctgcatcgtatcaaaattttgaa 4644374  T
Q  121 acctcaaatgcacttttctctgttgaagtaaacaacaa 158  Q
     ||||||||||||||||||||||  |||||||||||||    
T  4644373 ccctcaaatgcacttttctctgtcaaagtaaacaacaa 4644336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 21 - 158
Target Start/End: Original strand, 4845332 - 4845466
Alignment:
Q  21 ctctctctcaaatttcacatactcattttctaacatcatcactaactccactatttttcttcgccttcatttttacccaacttcatatcaaaattttgaa 120  Q
    |||| ||||||||||||||||||||||||||| |||  || |||  ||| || ||||| |||||||||||||||||||||||||||| || || |||||     
T  4845332 ctctttctcaaatttcacatactcattttctagcat--tc-ctagttcccctgtttttattcgccttcatttttacccaacttcataccagaactttgat 4845428  T
Q  121 acctcaaatgcacttttctctgttgaagtaaacaacaa 158  Q
     |||| ||||| ||||||||||| ||||||||||||||    
T  4845429 ccctccaatgctcttttctctgtcgaagtaaacaacaa 4845466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 22 - 143
Target Start/End: Complemental strand, 4637628 - 4637510
Alignment:
Q  22 tctctctcaaatttcacatactcattttctaacatcatcactaactccactatttttcttcgccttcatttttacccaacttcatatcaaaattttgaaa 121  Q
    ||||||||||||||||||||||||||||||| |||||   |||| |||||| |||||||||| |||||||||||||| || || |||||||| ||||||     
T  4637628 tctctctcaaatttcacatactcattttctagcatca---ctaattccactgtttttcttcgtcttcatttttaccctacatcttatcaaaactttgaac 4637532  T
Q  122 cctcaaatgcacttttctctgt 143  Q
    | || | |||| ||||||||||    
T  4637531 cttccagtgcaattttctctgt 4637510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 158
Target Start/End: Complemental strand, 4673477 - 4673344
Alignment:
Q  22 tctctctcaaatttcacatactcattttctaacatcatcactaactccactatttttcttcgccttcatttttacccaacttcatatcaaaattttgaaa 121  Q
    ||||||||||||||||||||||||||||||| |||||   |||| |||||| ||||||||||||||||||||||||||| || || | |||  |||||      
T  4673477 tctctctcaaatttcacatactcattttctagcatca---ctaattccactgtttttcttcgccttcatttttacccaaatttatctaaaagctttgatc 4673381  T
Q  122 cctcaaatgcacttttctctgttgaagtaaacaacaa 158  Q
    |||| |||||| |||||||| |  |||| ||||||||    
T  4673380 cctccaatgcaattttctctatcaaagttaacaacaa 4673344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 143
Target Start/End: Complemental strand, 4663461 - 4663346
Alignment:
Q  25 ctctcaaatttcacatactcattttctaacatcatcactaactccactatttttcttcgccttcatttttacccaacttcatatcaaaattttgaaacct 124  Q
    |||||||||||||||||||||||| ||| ||||    |||  | | || ||||||||||||||||||||||| |||| || ||| |||| |||||| |||    
T  4663461 ctctcaaatttcacatactcatttcctaccatcc---ctagttgccctgtttttcttcgccttcatttttactcaacatcttataaaaactttgaaccct 4663365  T
Q  125 caaatgcacttttctctgt 143  Q
    | |||||||||||||||||    
T  4663364 ccaatgcacttttctctgt 4663346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 198 - 325
Target Start/End: Complemental strand, 4864502 - 4864372
Alignment:
Q  198 caaagaatattccatccaaatcaaaccaaacgagaagctaaacataagtttcattcc---caacaacacaaaccaattgaatcctagttatgcttacatt 294  Q
    ||||||||||| ||| ||||||||| |||| |||||||||||||||| |||||||||   ||| || | ||| ||||  ||||||  |||||| | ||||    
T  4864502 caaagaatattgcattcaaatcaaatcaaatgagaagctaaacataactttcattccggccaataatataaatcaatcaaatccttattatgccttcatt 4864403  T
Q  295 aacggaatcgaagttgtgtctatgccttctt 325  Q
    || ||||| ||||| ||||||||||||||||    
T  4864402 aatggaatagaagtcgtgtctatgccttctt 4864372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 21 - 158
Target Start/End: Complemental strand, 4864700 - 4864566
Alignment:
Q  21 ctctctctcaaatttcacatactcattttctaacatcatcactaactccactatttttcttcgccttcatttttacccaacttcatatcaaaattttgaa 120  Q
    ||||||||||| ||||||||| |||||||||| |||||   |||  ||  || ||||| |||| ||||||||||||||||| || |||||||| ||||||    
T  4864700 ctctctctcaagtttcacatattcattttctaccatca---ctagttcgcctgtttttgttcgtcttcatttttacccaacatcttatcaaaactttgaa 4864604  T
Q  121 acctcaaatgcacttttctctgttgaagtaaacaacaa 158  Q
     | || || ||| |||| || |||||||||||||||||    
T  4864603 ccttcgaaagcatttttttcagttgaagtaaacaacaa 4864566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 198 - 325
Target Start/End: Complemental strand, 4673280 - 4673153
Alignment:
Q  198 caaagaatattccatccaaatcaaaccaaacgagaagctaaacataagtttcattcccaacaacacaaaccaattgaatcctagttatgcttacattaac 297  Q
    |||||||| ||  ||||||||||| || || |||||||||||||||| ||||||||| | || ||  ||| |||  |||  ||  ||||||| |||||||    
T  4673280 caaagaattttgtatccaaatcaagcccaatgagaagctaaacataaatttcattccaagcatcatgaacaaatcaaatgttaaatatgctttcattaac 4673181  T
Q  298 ggaatcgaagttgtgtctatgccttctt 325  Q
    ||||||||| ||||||| ||||||||||    
T  4673180 ggaatcgaaattgtgtcaatgccttctt 4673153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 4696498 - 4696578
Alignment:
Q  21 ctctctctcaaatttcacatactcattttctaacatcatcactaactccactatttttcttcgccttcatttttacccaacttc 104  Q
    |||||||||||||||||||||||| ||| ||| |||||  |||   ||| || ||||||||||||||||||||||||| |||||    
T  4696498 ctctctctcaaatttcacatactcttttcctagcatcactact---tcccctgtttttcttcgccttcatttttacccgacttc 4696578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Complemental strand, 4667663 - 4667612
Alignment:
Q  74 tttttcttcgccttcatttttacccaacttcatatcaaaattttgaaacctc 125  Q
    ||||||||||||| |||||||||||||| || |||||||| |||||||||||    
T  4667663 tttttcttcgcctccatttttacccaacatcgtatcaaaactttgaaacctc 4667612  T

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Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 124 - 159
Target Start/End: Original strand, 4696610 - 4696645
Alignment:
Q  124 tcaaatgcacttttctctgttgaagtaaacaacaac 159  Q
    ||||||||||||||||||||| ||||||||||||||    
T  4696610 tcaaatgcacttttctctgttaaagtaaacaacaac 4696645  T

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Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 267
Target Start/End: Complemental strand, 4631507 - 4631438
Alignment:
Q  198 caaagaatattccatccaaatcaaaccaaacgagaagctaaacataagtttcattcccaacaacacaaac 267  Q
    ||||||||||| ||| |||||    ||||| |||||||||||||||| |||||||||||| || ||||||    
T  4631507 caaagaatattgcatacaaattgctccaaatgagaagctaaacataactttcattcccaaaaatacaaac 4631438  T

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Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 325
Target Start/End: Complemental strand, 4667515 - 4667391
Alignment:
Q  198 caaagaatattccatccaaatcaaaccaaacgagaagctaaacataagtttcattcccaacaacacaaaccaattgaatcctagttatgcttacattaac 297  Q
    ||||||||||| |||||| | ||||| |   ||||| ||| || ||| |||||||||||| |||||||||||||| ||| |   || ||||| ||| |||    
T  4667515 caaagaatattgcatccataccaaacaaggggagaaactagacgtaactttcattcccaaaaacacaaaccaattaaatgc---ttttgctttcatcaac 4667419  T
Q  298 ggaatcgaagttgtgtctatgccttctt 325  Q
    ||||| ||  ||||||||||||| ||||    
T  4667418 ggaattgagattgtgtctatgccgtctt 4667391  T

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Target: chr4 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 71 - 124
Target Start/End: Original strand, 18925112 - 18925165
Alignment:
Q  71 ctatttttcttcgccttcatttttacccaacttcatatcaaaattttgaaacct 124  Q
    ||||||||||||||||||||||||||||||| || |||||||| ||||||||||    
T  18925112 ctatttttcttcgccttcatttttacccaacatcgtatcaaaactttgaaacct 18925165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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