View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7821_low_5 (Length: 280)

Name: NF7821_low_5
Description: NF7821
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7821_low_5
NF7821_low_5
[»] chr6 (60 HSPs)
chr6 (18-280)||(1532023-1532288)
chr6 (187-276)||(16766654-16766741)
chr6 (206-276)||(12696300-12696368)
chr6 (190-280)||(13851696-13851784)
chr6 (187-278)||(7938073-7938162)
chr6 (191-276)||(7977845-7977928)
chr6 (187-276)||(8776988-8777075)
chr6 (187-280)||(9027135-9027226)
chr6 (187-276)||(9107385-9107472)
chr6 (203-278)||(3398592-3398664)
chr6 (233-280)||(9025505-9025552)
chr6 (194-276)||(34595098-34595178)
chr6 (206-279)||(9658855-9658926)
chr6 (208-276)||(17435177-17435243)
chr6 (212-280)||(26562671-26562737)
chr6 (207-278)||(17341677-17341746)
chr6 (213-280)||(19040335-19040400)
chr6 (206-280)||(7086771-7086843)
chr6 (233-280)||(7265604-7265651)
chr6 (233-280)||(7996389-7996436)
chr6 (233-280)||(8022365-8022412)
chr6 (206-280)||(13360383-13360455)
chr6 (210-276)||(17841604-17841668)
chr6 (210-276)||(31959139-31959203)
chr6 (187-276)||(426529-426616)
chr6 (199-276)||(1681727-1681802)
chr6 (240-278)||(7569181-7569219)
chr6 (217-276)||(5970123-5970180)
chr6 (189-276)||(8365534-8365619)
chr6 (206-277)||(8805586-8805655)
chr6 (233-280)||(9195765-9195812)
chr6 (206-276)||(10770689-10770757)
chr6 (233-280)||(10888985-10889032)
chr6 (206-276)||(15489747-15489815)
chr6 (206-276)||(16833284-16833352)
chr6 (233-280)||(21924946-21924993)
chr6 (210-276)||(28152079-28152142)
chr6 (233-276)||(28715296-28715339)
chr6 (233-280)||(30866155-30866202)
chr6 (233-280)||(33001300-33001347)
chr6 (187-280)||(5732521-5732612)
chr6 (210-278)||(16388246-16388311)
chr6 (199-280)||(19044433-19044512)
chr6 (234-280)||(26178692-26178738)
chr6 (233-279)||(33817950-33817996)
chr6 (238-280)||(34073358-34073400)
chr6 (239-280)||(7151419-7151460)
chr6 (239-276)||(31384927-31384964)
chr6 (240-277)||(31579239-31579276)
chr6 (233-278)||(32511679-32511724)
chr6 (189-276)||(853874-853959)
chr6 (240-276)||(6349752-6349788)
chr6 (217-280)||(7723261-7723322)
chr6 (240-280)||(9617442-9617482)
chr6 (206-280)||(10339136-10339209)
chr6 (244-280)||(11591881-11591917)
chr6 (34-86)||(12411126-12411178)
chr6 (238-278)||(20576646-20576686)
chr6 (240-276)||(25038086-25038122)
chr6 (240-280)||(32320680-32320720)
[»] chr1 (69 HSPs)
chr1 (187-278)||(398778-398867)
chr1 (187-276)||(6612186-6612273)
chr1 (187-276)||(13011230-13011318)
chr1 (210-276)||(38078676-38078740)
chr1 (187-272)||(21366039-21366122)
chr1 (187-278)||(1486722-1486811)
chr1 (233-280)||(40181872-40181919)
chr1 (211-280)||(19562632-19562699)
chr1 (187-276)||(42359464-42359551)
chr1 (201-276)||(1262855-1262928)
chr1 (208-270)||(2851000-2851059)
chr1 (189-276)||(10572604-10572689)
chr1 (205-279)||(16927197-16927269)
chr1 (233-280)||(17754312-17754359)
chr1 (233-280)||(19324563-19324610)
chr1 (206-276)||(48450602-48450670)
chr1 (187-280)||(10577746-10577837)
chr1 (199-280)||(20157361-20157440)
chr1 (234-280)||(34712394-34712440)
chr1 (217-278)||(36878448-36878507)
chr1 (220-276)||(113289-113343)
chr1 (239-280)||(7918222-7918263)
chr1 (239-280)||(9828051-9828092)
chr1 (191-275)||(15323124-15323206)
chr1 (239-276)||(18190123-18190160)
chr1 (235-276)||(37055871-37055912)
chr1 (240-280)||(1864891-1864931)
chr1 (217-276)||(3490405-3490462)
chr1 (240-280)||(17425104-17425144)
chr1 (233-277)||(25452162-25452206)
chr1 (189-276)||(31015002-31015087)
chr1 (187-278)||(34298393-34298482)
chr1 (206-272)||(2896140-2896204)
chr1 (206-276)||(5376515-5376583)
chr1 (233-280)||(5898277-5898324)
chr1 (189-276)||(5927355-5927440)
chr1 (233-280)||(6427351-6427398)
chr1 (233-280)||(12443471-12443518)
chr1 (233-280)||(13436459-13436506)
chr1 (233-276)||(21378579-21378622)
chr1 (233-280)||(25098566-25098613)
chr1 (240-279)||(28674808-28674847)
chr1 (233-280)||(30847731-30847778)
chr1 (233-276)||(41877485-41877528)
chr1 (210-276)||(46348398-46348462)
chr1 (187-276)||(16297298-16297385)
chr1 (238-280)||(21038089-21038131)
chr1 (242-280)||(25361896-25361934)
chr1 (187-280)||(38503277-38503368)
chr1 (242-280)||(44482240-44482278)
chr1 (187-267)||(609482-609560)
chr1 (181-278)||(5944232-5944329)
chr1 (233-278)||(9629913-9629958)
chr1 (239-280)||(10233260-10233301)
chr1 (239-280)||(14332653-14332694)
chr1 (239-276)||(24577201-24577238)
chr1 (233-274)||(26238129-26238170)
chr1 (39-80)||(29944580-29944621)
chr1 (193-276)||(40917714-40917793)
chr1 (238-278)||(8010300-8010340)
chr1 (217-280)||(17831542-17831603)
chr1 (217-276)||(22881631-22881688)
chr1 (187-278)||(23531791-23531880)
chr1 (244-280)||(23636060-23636096)
chr1 (240-280)||(23804436-23804476)
chr1 (217-276)||(31672910-31672967)
chr1 (240-276)||(40258948-40258984)
chr1 (206-276)||(47989474-47989541)
chr1 (240-280)||(52903257-52903297)
[»] chr5 (46 HSPs)
chr5 (187-273)||(13287417-13287501)
chr5 (186-276)||(21191071-21191159)
chr5 (187-276)||(21522707-21522794)
chr5 (187-276)||(21533273-21533360)
chr5 (189-278)||(22013373-22013460)
chr5 (210-276)||(43001780-43001844)
chr5 (187-276)||(24906316-24906403)
chr5 (181-276)||(6247573-6247666)
chr5 (229-280)||(36838540-36838591)
chr5 (191-276)||(6326312-6326395)
chr5 (200-272)||(19552562-19552632)
chr5 (189-276)||(37328859-37328944)
chr5 (233-280)||(6471900-6471947)
chr5 (210-276)||(14674249-14674313)
chr5 (210-276)||(21576760-21576824)
chr5 (233-276)||(27932236-27932279)
chr5 (233-280)||(41091268-41091315)
chr5 (240-278)||(5467991-5468029)
chr5 (199-280)||(16203806-16203885)
chr5 (201-280)||(3751941-3752017)
chr5 (187-255)||(15382434-15382500)
chr5 (217-276)||(31084310-31084367)
chr5 (217-276)||(39698528-39698585)
chr5 (208-271)||(40000555-40000616)
chr5 (233-280)||(3966504-3966551)
chr5 (187-277)||(6770500-6770588)
chr5 (233-280)||(12264840-12264887)
chr5 (206-280)||(15410459-15410531)
chr5 (233-280)||(18421852-18421899)
chr5 (233-280)||(30502399-30502446)
chr5 (233-280)||(30542742-30542789)
chr5 (233-276)||(41633736-41633779)
chr5 (240-278)||(28588687-28588725)
chr5 (187-276)||(41995428-41995515)
chr5 (189-274)||(42469180-42469263)
chr5 (233-274)||(2419858-2419899)
chr5 (242-279)||(10022642-10022679)
chr5 (238-279)||(17593734-17593775)
chr5 (243-280)||(24273041-24273078)
chr5 (243-280)||(24389136-24389173)
chr5 (239-280)||(35017044-35017085)
chr5 (217-280)||(27144450-27144511)
chr5 (240-280)||(32630746-32630786)
chr5 (199-278)||(36642775-36642852)
chr5 (240-280)||(38749574-38749614)
chr5 (217-280)||(39205867-39205928)
[»] scaffold0652 (1 HSPs)
scaffold0652 (187-276)||(477-564)
[»] chr4 (45 HSPs)
chr4 (187-276)||(23293001-23293088)
chr4 (192-278)||(24343469-24343553)
chr4 (187-276)||(27706192-27706279)
chr4 (199-280)||(40179647-40179726)
chr4 (206-278)||(30838186-30838256)
chr4 (187-278)||(35157998-35158087)
chr4 (233-280)||(15029766-15029813)
chr4 (194-276)||(21945467-21945547)
chr4 (234-280)||(35952628-35952674)
chr4 (199-280)||(36635293-36635372)
chr4 (233-278)||(8423731-8423776)
chr4 (206-270)||(11651155-11651217)
chr4 (233-278)||(14126124-14126169)
chr4 (240-280)||(903930-903970)
chr4 (187-278)||(12895287-12895376)
chr4 (187-276)||(20633442-20633526)
chr4 (233-277)||(21873385-21873429)
chr4 (233-277)||(21929246-21929290)
chr4 (240-280)||(22440611-22440651)
chr4 (210-276)||(30298926-30298991)
chr4 (210-276)||(30327794-30327859)
chr4 (239-279)||(37698719-37698759)
chr4 (233-277)||(56257934-56257978)
chr4 (233-276)||(2361990-2362033)
chr4 (233-280)||(15659771-15659818)
chr4 (233-276)||(29205445-29205488)
chr4 (233-280)||(40613451-40613498)
chr4 (233-276)||(51701259-51701302)
chr4 (239-278)||(54580036-54580075)
chr4 (238-276)||(11596367-11596405)
chr4 (238-276)||(28964263-28964301)
chr4 (194-278)||(16402224-16402306)
chr4 (235-280)||(18576048-18576093)
chr4 (214-274)||(20743295-20743353)
chr4 (240-277)||(32910559-32910596)
chr4 (204-276)||(47263960-47264030)
chr4 (217-276)||(4383355-4383411)
chr4 (240-280)||(5775369-5775409)
chr4 (201-280)||(7670652-7670732)
chr4 (210-273)||(12077808-12077869)
chr4 (233-277)||(16189710-16189754)
chr4 (233-277)||(17425403-17425447)
chr4 (206-273)||(28720852-28720916)
chr4 (206-273)||(34515892-34515957)
chr4 (206-276)||(49431001-49431070)
[»] chr3 (49 HSPs)
chr3 (187-276)||(4990982-4991069)
chr3 (187-273)||(3164043-3164127)
chr3 (187-273)||(16000034-16000118)
chr3 (192-278)||(24205054-24205138)
chr3 (194-276)||(28917965-28918045)
chr3 (215-276)||(4987306-4987365)
chr3 (189-278)||(8383216-8383303)
chr3 (191-276)||(15796309-15796392)
chr3 (206-275)||(9800016-9800083)
chr3 (210-274)||(10954932-10954994)
chr3 (233-280)||(7928451-7928498)
chr3 (233-280)||(8039846-8039893)
chr3 (233-280)||(9624642-9624689)
chr3 (233-280)||(11313811-11313858)
chr3 (187-276)||(35994753-35994839)
chr3 (206-278)||(30994895-30994965)
chr3 (237-277)||(11251983-11252023)
chr3 (209-280)||(11493372-11493441)
chr3 (240-280)||(16192761-16192801)
chr3 (217-276)||(21479105-21479162)
chr3 (238-278)||(25948900-25948940)
chr3 (233-277)||(27277852-27277896)
chr3 (187-273)||(10335304-10335388)
chr3 (206-276)||(14216868-14216936)
chr3 (206-276)||(14222997-14223065)
chr3 (239-278)||(17005632-17005671)
chr3 (206-276)||(26492220-26492288)
chr3 (233-276)||(26508111-26508154)
chr3 (199-276)||(8587036-8587111)
chr3 (187-276)||(10268501-10268588)
chr3 (233-279)||(10690274-10690320)
chr3 (238-280)||(11665950-11665992)
chr3 (233-275)||(14979182-14979224)
chr3 (199-280)||(25093471-25093550)
chr3 (240-274)||(33006831-33006865)
chr3 (238-280)||(49505165-49505207)
chr3 (199-276)||(55401044-55401119)
chr3 (187-266)||(750643-750721)
chr3 (239-280)||(12704014-12704055)
chr3 (217-277)||(15544680-15544738)
chr3 (235-280)||(20691322-20691367)
chr3 (240-277)||(21211296-21211333)
chr3 (239-280)||(29508451-29508492)
chr3 (233-278)||(34307793-34307838)
chr3 (239-276)||(34910324-34910361)
chr3 (233-277)||(3618882-3618926)
chr3 (217-276)||(20503452-20503509)
chr3 (240-280)||(32804551-32804591)
chr3 (233-273)||(51206371-51206411)
[»] chr7 (48 HSPs)
chr7 (189-276)||(27945000-27945085)
chr7 (187-276)||(24339599-24339686)
chr7 (189-280)||(7328702-7328791)
chr7 (206-276)||(13770667-13770735)
chr7 (206-276)||(24105654-24105722)
chr7 (206-276)||(26733280-26733348)
chr7 (203-280)||(3721067-3721141)
chr7 (233-280)||(18013085-18013132)
chr7 (237-276)||(30813817-30813856)
chr7 (187-280)||(1433411-1433502)
chr7 (206-279)||(5235962-5236033)
chr7 (187-276)||(11061091-11061178)
chr7 (238-276)||(21880158-21880196)
chr7 (187-276)||(25481859-25481946)
chr7 (194-278)||(43249957-43250039)
chr7 (240-280)||(15902830-15902870)
chr7 (187-278)||(21140995-21141084)
chr7 (240-280)||(27732250-27732290)
chr7 (233-277)||(29787383-29787427)
chr7 (217-280)||(32308107-32308168)
chr7 (206-273)||(43027487-43027552)
chr7 (238-277)||(2424620-2424659)
chr7 (233-280)||(8160417-8160464)
chr7 (233-280)||(12278836-12278883)
chr7 (234-277)||(12289116-12289159)
chr7 (241-276)||(12843190-12843225)
chr7 (233-280)||(16341497-16341544)
chr7 (241-280)||(19930952-19930991)
chr7 (233-280)||(20549792-20549839)
chr7 (233-276)||(28155571-28155614)
chr7 (240-278)||(5938480-5938518)
chr7 (238-280)||(17851437-17851479)
chr7 (187-280)||(22602721-22602812)
chr7 (238-276)||(26033476-26033514)
chr7 (239-280)||(5835254-5835295)
chr7 (243-280)||(17307904-17307941)
chr7 (233-278)||(19992002-19992047)
chr7 (239-280)||(22868049-22868090)
chr7 (187-275)||(30730994-30731080)
chr7 (216-280)||(41020482-41020544)
chr7 (238-278)||(1401031-1401071)
chr7 (240-280)||(4008575-4008615)
chr7 (240-280)||(4013967-4014007)
chr7 (240-280)||(4909159-4909199)
chr7 (201-268)||(11722121-11722186)
chr7 (230-278)||(18233611-18233659)
chr7 (217-280)||(22484012-22484073)
chr7 (217-280)||(42720901-42720962)
[»] chr2 (45 HSPs)
chr2 (206-277)||(21782832-21782901)
chr2 (189-276)||(20539689-20539774)
chr2 (186-277)||(28412306-28412395)
chr2 (187-278)||(36756357-36756446)
chr2 (210-276)||(21374714-21374778)
chr2 (206-280)||(21616738-21616810)
chr2 (210-276)||(39323244-39323308)
chr2 (208-276)||(15972851-15972917)
chr2 (181-276)||(6940206-6940299)
chr2 (190-276)||(21624226-21624311)
chr2 (206-276)||(12940950-12941018)
chr2 (233-280)||(28677910-28677957)
chr2 (187-277)||(31284005-31284093)
chr2 (240-278)||(23921261-23921299)
chr2 (238-280)||(34691816-34691858)
chr2 (238-280)||(34714228-34714270)
chr2 (203-280)||(35449486-35449561)
chr2 (233-278)||(42832289-42832334)
chr2 (217-280)||(15909643-15909704)
chr2 (191-278)||(18420447-18420532)
chr2 (239-278)||(12668436-12668475)
chr2 (239-278)||(18622613-18622652)
chr2 (206-276)||(18841028-18841096)
chr2 (199-276)||(19536412-19536488)
chr2 (233-280)||(23718027-23718074)
chr2 (233-280)||(24105699-24105746)
chr2 (210-276)||(30404865-30404929)
chr2 (233-280)||(31808078-31808125)
chr2 (233-280)||(37411255-37411302)
chr2 (210-276)||(37558957-37559021)
chr2 (240-279)||(40361766-40361805)
chr2 (233-280)||(44860321-44860368)
chr2 (211-276)||(24894370-24894433)
chr2 (206-278)||(29663985-29664056)
chr2 (238-276)||(30717545-30717583)
chr2 (239-280)||(5367199-5367240)
chr2 (200-276)||(15657834-15657908)
chr2 (208-276)||(18421941-18422007)
chr2 (206-274)||(30298464-30298530)
chr2 (233-277)||(18276522-18276566)
chr2 (238-278)||(25080906-25080946)
chr2 (238-278)||(27286305-27286345)
chr2 (232-280)||(30527606-30527654)
chr2 (240-280)||(32199151-32199191)
chr2 (217-276)||(38117174-38117231)
[»] scaffold0223 (1 HSPs)
scaffold0223 (199-276)||(20141-20216)
[»] scaffold0053 (1 HSPs)
scaffold0053 (187-276)||(8755-8842)
[»] scaffold0027 (1 HSPs)
scaffold0027 (187-276)||(46639-46726)
[»] chr8 (49 HSPs)
chr8 (187-276)||(2572071-2572158)
chr8 (187-276)||(22651933-22652020)
chr8 (186-280)||(11803215-11803307)
chr8 (233-280)||(11927097-11927144)
chr8 (199-276)||(29510319-29510394)
chr8 (199-280)||(36934639-36934718)
chr8 (206-279)||(13203617-13203688)
chr8 (239-279)||(7658470-7658510)
chr8 (217-280)||(34897072-34897133)
chr8 (233-280)||(4611535-4611582)
chr8 (233-276)||(7442846-7442889)
chr8 (233-280)||(11944666-11944713)
chr8 (233-280)||(13844607-13844654)
chr8 (233-280)||(14731713-14731760)
chr8 (233-280)||(25172709-25172756)
chr8 (233-280)||(31236588-31236635)
chr8 (207-276)||(18170497-18170564)
chr8 (207-276)||(18634065-18634132)
chr8 (187-280)||(24362213-24362304)
chr8 (207-280)||(29776013-29776084)
chr8 (237-278)||(3025556-3025597)
chr8 (216-276)||(22595980-22596038)
chr8 (206-278)||(25192360-25192430)
chr8 (206-270)||(41838144-41838206)
chr8 (187-278)||(926801-926890)
chr8 (239-279)||(14134706-14134746)
chr8 (201-280)||(27213518-27213595)
chr8 (181-276)||(31556948-31557040)
chr8 (233-280)||(12606840-12606887)
chr8 (189-267)||(13436988-13437064)
chr8 (206-276)||(20873045-20873113)
chr8 (233-276)||(25566842-25566885)
chr8 (210-276)||(36450769-36450833)
chr8 (233-280)||(39954290-39954337)
chr8 (233-276)||(40332192-40332235)
chr8 (187-276)||(4673440-4673527)
chr8 (217-278)||(15816142-15816201)
chr8 (217-278)||(20679408-20679467)
chr8 (238-280)||(34222953-34222995)
chr8 (239-276)||(4948659-4948696)
chr8 (192-276)||(22197757-22197839)
chr8 (187-274)||(24857966-24858054)
chr8 (240-280)||(4122260-4122300)
chr8 (240-280)||(4786349-4786389)
chr8 (34-86)||(12958196-12958248)
chr8 (240-276)||(24669441-24669477)
chr8 (199-275)||(24727768-24727844)
chr8 (217-276)||(30271306-30271363)
chr8 (240-280)||(34201057-34201097)
[»] scaffold0008 (1 HSPs)
scaffold0008 (187-278)||(263385-263474)
[»] scaffold0003 (1 HSPs)
scaffold0003 (194-277)||(241558-241639)
[»] scaffold0103 (1 HSPs)
scaffold0103 (210-276)||(51791-51855)
[»] scaffold0007 (1 HSPs)
scaffold0007 (192-278)||(225281-225365)
[»] scaffold0021 (1 HSPs)
scaffold0021 (187-276)||(130439-130526)
[»] scaffold0049 (1 HSPs)
scaffold0049 (208-276)||(63750-63817)
[»] scaffold0004 (1 HSPs)
scaffold0004 (217-276)||(92794-92851)
[»] scaffold1528 (1 HSPs)
scaffold1528 (233-280)||(1036-1083)
[»] scaffold0376 (1 HSPs)
scaffold0376 (233-280)||(6313-6360)
[»] scaffold0020 (1 HSPs)
scaffold0020 (233-280)||(135323-135370)
[»] scaffold0018 (2 HSPs)
scaffold0018 (199-276)||(178833-178909)
scaffold0018 (206-276)||(192264-192332)
[»] scaffold0722 (1 HSPs)
scaffold0722 (217-276)||(7047-7104)
[»] scaffold0306 (1 HSPs)
scaffold0306 (189-276)||(13359-13444)
[»] scaffold0152 (1 HSPs)
scaffold0152 (189-276)||(21883-21968)
[»] scaffold0123 (1 HSPs)
scaffold0123 (233-280)||(44536-44583)
[»] scaffold0122 (1 HSPs)
scaffold0122 (192-278)||(8628-8712)
[»] scaffold0066 (1 HSPs)
scaffold0066 (233-276)||(33378-33421)
[»] scaffold0050 (1 HSPs)
scaffold0050 (240-278)||(70286-70324)
[»] scaffold0361 (1 HSPs)
scaffold0361 (239-276)||(14537-14574)
[»] scaffold0044 (1 HSPs)
scaffold0044 (241-278)||(53189-53226)
[»] scaffold0036 (1 HSPs)
scaffold0036 (239-280)||(9758-9799)


Alignment Details
Target: chr6 (Bit Score: 211; Significance: 1e-116; HSPs: 60)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 18 - 280
Target Start/End: Original strand, 1532023 - 1532288
Alignment:
Q  18 tatttgaattaaggatccttggtt-aagttagaaaagacttgaaccatctcatccaagcactcttgggtacgtcattggatttcttatatgtgatttaca 116  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| |||||||||||| |||||||||||||||||||    
T  1532023 tatttgaactaaggatccttggtttaagttagaaaagacttgaaccatctcatccaagcacttttggatacgtcattggaattcttatatgtgatttaca 1532122  T
Q  117 actaaggtcttactttca--gtttgtttcatcaacttgtagacttggtttacaatgtagttgaccatatgaaatacggacacgcacaccgaacacgacac 214  Q
    |||||||||||||| |||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  1532123 actaaggtcttactgtcaaagtttgtttcatcaacttgtagacttggtttacaatgaagttgaccatatgaaatacgaacacgcacaccgaacacgacac 1532222  T
Q  215 gaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
     ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  1532223 aaacactgacacgtcgacacaccgctaataatttgataaaattacataattcagtgtaattatatg 1532288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 187 - 276
Target Start/End: Original strand, 16766654 - 16766741
Alignment:
Q  187 atacggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    ||||||||||| |||||| |||||||| | ||||||||||| |||||||  ||||||||||||| ||||| |||||||||||||||||||    
T  16766654 atacggacacggacaccggacacgacatggacactgacacgccgacaca--gctaataatttgaaaaaatcacataattcagtgtaatta 16766741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 206 - 276
Target Start/End: Original strand, 12696300 - 12696368
Alignment:
Q  206 acacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||||||||| ||||||||||| |||||||  ||||||||||||| |||||||||||||||||||||||||    
T  12696300 acacgacacggacactgacacgccgacaca--gctaataatttgaaaaaattacataattcagtgtaatta 12696368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 13851696 - 13851784
Alignment:
Q  190 cggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||||||| |||  |||||||||||| ||||||||||||||||||   ||||||||||||| ||||| || ||||||||||||||||||||    
T  13851696 cggacacggacattgaacacgacacggacactgacacgtcgacacc--gctaataatttgagaaaataacgtaattcagtgtaattatatg 13851784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 278
Target Start/End: Original strand, 7938073 - 7938162
Alignment:
Q  187 atacggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattata 278  Q
    ||||||||||| |||||| |||||||| | ||||||||||| |||||||  ||||||||||||| ||||| | |||||| ||||||||||||    
T  7938073 atacggacacggacaccggacacgacatggacactgacacgccgacaca--gctaataatttgaaaaaatcatataatttagtgtaattata 7938162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 191 - 276
Target Start/End: Complemental strand, 7977928 - 7977845
Alignment:
Q  191 ggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    ||||||| |||| | |||||||| | | ||||||||| |||||||  ||||||||||||| |||||||||||||||||||||||||    
T  7977928 ggacacggacactggacacgacatggatactgacacgccgacaca--gctaataatttgaaaaaattacataattcagtgtaatta 7977845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 276
Target Start/End: Complemental strand, 8777075 - 8776988
Alignment:
Q  187 atacggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    ||||||||||| ||| || |||||||||| ||||||||||| |||||||   |||||||||||| ||||| ||| |||||||||||||||    
T  8777075 atacggacacggacaacggacacgacacggacactgacacgccgacaca--actaataatttgaaaaaatcacaaaattcagtgtaatta 8776988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 280
Target Start/End: Original strand, 9027135 - 9027226
Alignment:
Q  187 atacggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    ||||||||||| || ||| |||||||||| ||||||||||| ||  |||| ||||||||||||| | ||| ||||||||| |||||||||||||    
T  9027135 atacggacacggactccggacacgacacggacactgacacgccg--acaccgctaataatttgagataatcacataattccgtgtaattatatg 9027226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 276
Target Start/End: Complemental strand, 9107472 - 9107385
Alignment:
Q  187 atacggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||| |||||| |||||| |||||||||| ||||| ||||| |||||||  ||||||||||||| ||||| ||| |||||||||||||||    
T  9107472 atactgacacggacaccggacacgacacggacactaacacgccgacaca--gctaataatttgaaaaaatcacaaaattcagtgtaatta 9107385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 3398592 - 3398664
Alignment:
Q  203 cgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattata 278  Q
    ||||||||||||| ||||||||||| |||||||  ||||||||||||| ||||| | |||||||||||||||||||    
T  3398592 cgaacacgacacggacactgacacgccgacaca--gctaataatttga-aaaatcatataattcagtgtaattata 3398664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 233 - 280
Target Start/End: Complemental strand, 9025552 - 9025505
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||    
T  9025552 acactgctaataatttgagaaaatcacataattcagtgtaattatatg 9025505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 276
Target Start/End: Original strand, 34595098 - 34595178
Alignment:
Q  194 cacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||| |||||| |||||||||| ||| ||||||| |||||||   |||||||||||| ||||| |||||||||||||||||||    
T  34595098 cacggacaccggacacgacacggacaatgacacgccgacacaa--ctaataatttgaaaaaatcacataattcagtgtaatta 34595178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 206 - 279
Target Start/End: Original strand, 9658855 - 9658926
Alignment:
Q  206 acacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattatat 279  Q
    |||||||||| ||||||||||| ||||||   ||||||||||| | ||||| ||||||||||||||||||||||    
T  9658855 acacgacacggacactgacacgccgacacc--gctaataatttaagaaaatcacataattcagtgtaattatat 9658926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 276
Target Start/End: Original strand, 17435177 - 17435243
Alignment:
Q  208 acgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||||||| ||||||| ||||||||| |  ||||||||||| | |||||||||||||||||||||||||    
T  17435177 acgacacggacactgatacgtcgacata--gctaataattttaaaaaattacataattcagtgtaatta 17435243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 212 - 280
Target Start/End: Original strand, 26562671 - 26562737
Alignment:
Q  212 cacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    ||||||||| |||||| ||||||  |||||| ||||||| ||||| |||||||||||||||||||||||    
T  26562671 cacgaacacggacacgccgacac--tgctaaaaatttgagaaaatcacataattcagtgtaattatatg 26562737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 207 - 278
Target Start/End: Complemental strand, 17341746 - 17341677
Alignment:
Q  207 cacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattata 278  Q
    |||||||||  |||||||||| ||||||  |  ||||||||||||||||| |||||||||||||||||||||    
T  17341746 cacgacacgggcactgacacgccgacaccgt--taataatttgataaaatcacataattcagtgtaattata 17341677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 213 - 280
Target Start/End: Original strand, 19040335 - 19040400
Alignment:
Q  213 acgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    ||||| ||||||||| ||||||   ||||||||||||| ||||| |||||||||||||||||||||||    
T  19040335 acgaatactgacacgccgacacc--gctaataatttgagaaaatcacataattcagtgtaattatatg 19040400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 206 - 280
Target Start/End: Original strand, 7086771 - 7086843
Alignment:
Q  206 acacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||||||||  |||| ||||||||| |||  |||||||||||||| ||||| |||||||| ||||||||||||||    
T  7086771 acacgacacagacaccgacacgtcggcac--tgctaataatttgagaaaatcacataatttagtgtaattatatg 7086843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 280
Target Start/End: Complemental strand, 7265651 - 7265604
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||| ||||||||||||| ||||| |||||||||||||||||||||||    
T  7265651 acaccgctaataatttgagaaaatcacataattcagtgtaattatatg 7265604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 280
Target Start/End: Complemental strand, 7996436 - 7996389
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||||||||||||||||| ||||| | |||||||||||||||||||||    
T  7996436 acactgctaataatttgagaaaatcatataattcagtgtaattatatg 7996389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 280
Target Start/End: Original strand, 8022365 - 8022412
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||||||||||||||||| ||||| | |||||||||||||||||||||    
T  8022365 acactgctaataatttgagaaaatcatataattcagtgtaattatatg 8022412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 206 - 280
Target Start/End: Complemental strand, 13360455 - 13360383
Alignment:
Q  206 acacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||||| |||||||| |||||||||||||    ||| |||||||| ||||| |||||||||||||||||||||||    
T  13360455 acacgatacgaacacagacacgtcgacacca--ctagtaatttgagaaaatcacataattcagtgtaattatatg 13360383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 276
Target Start/End: Complemental strand, 17841668 - 17841604
Alignment:
Q  210 gacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||||| ||||||||||| |||||||  ||||||||||||| ||||| |||||||| ||||||||||    
T  17841668 gacacggacactgacacgccgacaca--gctaataatttgaaaaaatcacataatttagtgtaatta 17841604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 276
Target Start/End: Original strand, 31959139 - 31959203
Alignment:
Q  210 gacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||||||||||||||||| || ||||  ||||||||||||| ||||| ||||||| |||||||||||    
T  31959139 gacacgaacactgacacgccgtcaca--gctaataatttgaaaaaatcacataatgcagtgtaatta 31959203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 276
Target Start/End: Complemental strand, 426616 - 426529
Alignment:
Q  187 atacggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||| |||||| | |||| |||||||||| ||||||||||| |||||||  | ||||||||||| ||||| |||||||| | ||||||||    
T  426616 atacagacacggataccggacacgacacggacactgacacgccgacaca--gttaataatttgaaaaaatcacataattaaatgtaatta 426529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 276
Target Start/End: Original strand, 1681727 - 1681802
Alignment:
Q  199 acaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    ||||||||||||||||  ||||| ||||| |||||||   |||||||||||| ||||| || ||||||||||||||||    
T  1681727 acaccgaacacgacacatacactaacacgccgacacaa--ctaataatttgaaaaaatcacgtaattcagtgtaatta 1681802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 278
Target Start/End: Complemental strand, 7569219 - 7569181
Alignment:
Q  240 taataatttgataaaattacataattcagtgtaattata 278  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  7569219 taataatttgagaaaattacataattcagtgtaattata 7569181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 276
Target Start/End: Complemental strand, 5970180 - 5970123
Alignment:
Q  217 acactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||| |||||||||||||| |  ||||||||||| ||||| |||||||||||||||||||    
T  5970180 acacggacacgtcgacacagt--taataatttgaaaaaatcacataattcagtgtaatta 5970123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 276
Target Start/End: Complemental strand, 8365619 - 8365534
Alignment:
Q  189 acggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    ||||| ||| |||||  |||||||||| ||||||||||| |||||||   |||||||||||| || || ||||||||| |||||||||    
T  8365619 acggatacggacaccagacacgacacggacactgacacgccgacaca--actaataatttgaaaatatcacataattcggtgtaatta 8365534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 277
Target Start/End: Complemental strand, 8805655 - 8805586
Alignment:
Q  206 acacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattat 277  Q
    |||||||||  |||| ||||||||| |||  |||||||||||||| ||||| |||||||| |||||||||||    
T  8805655 acacgacacagacaccgacacgtcggcac--tgctaataatttgagaaaatcacataatttagtgtaattat 8805586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 280
Target Start/End: Complemental strand, 9195812 - 9195765
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    ||||| |||||||||||| ||||| |||||||| ||||||||||||||    
T  9195812 acactcctaataatttgagaaaatgacataatttagtgtaattatatg 9195765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 206 - 276
Target Start/End: Complemental strand, 10770757 - 10770689
Alignment:
Q  206 acacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||||||| | ||||||||||| | |||||   |||||||||||| ||||| |||||||||||||||||||    
T  10770757 acacgacatggacactgacacgccaacacaa--ctaataatttgaaaaaatcacataattcagtgtaatta 10770689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 280
Target Start/End: Complemental strand, 10889032 - 10888985
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||| ||||||||||||||||||| |||||||| ||||| ||||||||    
T  10889032 acaccgctaataatttgataaaatcacataatttagtgtgattatatg 10888985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 206 - 276
Target Start/End: Complemental strand, 15489815 - 15489747
Alignment:
Q  206 acacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||| ||||| ||||| |||||||||||||   |||||||||||| ||||||||| |||||| ||||||||    
T  15489815 acacaacacggacactaacacgtcgacacaa--ctaataatttgaaaaaattacacaattcaatgtaatta 15489747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 206 - 276
Target Start/End: Original strand, 16833284 - 16833352
Alignment:
Q  206 acacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||||||||  ||||||||||| |||||||   |||||||||||| ||||| ||||| |||||||||||||    
T  16833284 acacgacacagacactgacacgccgacacaa--ctaataatttgaaaaaatcacatacttcagtgtaatta 16833352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 280
Target Start/End: Complemental strand, 21924993 - 21924946
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||||||||||||||||| || || | |||||||||||||||||||||    
T  21924993 acactgctaataatttgagaatatcaaataattcagtgtaattatatg 21924946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 276
Target Start/End: Original strand, 28152079 - 28152142
Alignment:
Q  210 gacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||||| ||||||||||| ||||| |  ||||||||||||| ||||| |||||||||||||||||||    
T  28152079 gacacggacactgacacgccgacaaa--gctaataatttga-aaaatcacataattcagtgtaatta 28152142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 276
Target Start/End: Original strand, 28715296 - 28715339
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||| ||||||||||||| ||||| |||||||||||||||||||    
T  28715296 acacggctaataatttgaaaaaatgacataattcagtgtaatta 28715339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 280
Target Start/End: Complemental strand, 30866202 - 30866155
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||| ||||||||||||| ||||| |||||||||| ||||||||||||    
T  30866202 acaccgctaataatttgagaaaatcacataattcaatgtaattatatg 30866155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 280
Target Start/End: Complemental strand, 33001347 - 33001300
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||||||||||||||||| ||||| |||||||| | ||||||||||||    
T  33001347 acactgctaataatttgaaaaaatcacataattaaatgtaattatatg 33001300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 280
Target Start/End: Complemental strand, 5732612 - 5732521
Alignment:
Q  187 atacggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||| |||||| |||| | |||||||| | ||||||||||| ||||||  |  ||||||||||| ||||| ||||| || ||||||||||||||    
T  5732612 atacagacacggacactggacacgacatggacactgacacgccgacaccgt--taataatttgagaaaatcacatattttagtgtaattatatg 5732521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 278
Target Start/End: Complemental strand, 16388311 - 16388246
Alignment:
Q  210 gacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattata 278  Q
    |||||| ||||||||||||||| |    || |||||||||| ||||| |||||||||||||||||||||    
T  16388311 gacacggacactgacacgtcgataa---gcaaataatttgaaaaaatcacataattcagtgtaattata 16388246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 280
Target Start/End: Original strand, 19044433 - 19044512
Alignment:
Q  199 acaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||||||| |||||| | ||||||||||| ||||||    |||||||||||| || || |||||||||||||| ||||||||    
T  19044433 acaccgaatacgacatggacactgacacgccgacacga--ctaataatttgagaatatcacataattcagtgttattatatg 19044512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 234 - 280
Target Start/End: Complemental strand, 26178738 - 26178692
Alignment:
Q  234 cactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||| |||||||||||||||||| |||||||| |||||||| |||||    
T  26178738 cacttctaataatttgataaaatcacataatttagtgtaatcatatg 26178692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 279
Target Start/End: Original strand, 33817950 - 33817996
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattatat 279  Q
    |||| |||||||||| || |||||| |||||||||||||||||||||    
T  33817950 acaccgctaataattggagaaaatttcataattcagtgtaattatat 33817996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 238 - 280
Target Start/End: Complemental strand, 34073400 - 34073358
Alignment:
Q  238 gctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    ||||||||||||| |||||  ||||||||||||||||||||||    
T  34073400 gctaataatttgagaaaatctcataattcagtgtaattatatg 34073358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 280
Target Start/End: Original strand, 7151419 - 7151460
Alignment:
Q  239 ctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||||||||||| ||||| |||||||| ||||||||||||||    
T  7151419 ctaataatttgaaaaaatcacataattaagtgtaattatatg 7151460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 276
Target Start/End: Original strand, 31384927 - 31384964
Alignment:
Q  239 ctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||||||||||| ||||| |||||||||||||||||||    
T  31384927 ctaataatttgaaaaaatcacataattcagtgtaatta 31384964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 277
Target Start/End: Complemental strand, 31579276 - 31579239
Alignment:
Q  240 taataatttgataaaattacataattcagtgtaattat 277  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  31579276 taataatttgagaaaatcacataattcagtgtaattat 31579239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 278
Target Start/End: Complemental strand, 32511724 - 32511679
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattata 278  Q
    |||| ||||||||||| | ||||| |||||||||||||||||||||    
T  32511724 acaccgctaataatttaagaaaatcacataattcagtgtaattata 32511679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 276
Target Start/End: Complemental strand, 853959 - 853874
Alignment:
Q  189 acggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    ||||| ||| |||||| |||||||||| |  |||||||| |||||||   |||||||||||| ||||| |||||||| |||| |||||    
T  853959 acggatacggacaccggacacgacacggatgctgacacgccgacacaa--ctaataatttgaaaaaatcacataattaagtgcaatta 853874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 276
Target Start/End: Complemental strand, 6349788 - 6349752
Alignment:
Q  240 taataatttgataaaattacataattcagtgtaatta 276  Q
    ||||||||||| |||||||||||||||| ||||||||    
T  6349788 taataatttgaaaaaattacataattcattgtaatta 6349752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 280
Target Start/End: Complemental strand, 7723322 - 7723261
Alignment:
Q  217 acactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||||||||||| |||||  |||||||||||||| ||||| | |||||||||  ||||||||||    
T  7723322 acactgacacgtggacac--tgctaataatttgagaaaatcatataattcagcataattatatg 7723261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 280
Target Start/End: Original strand, 9617442 - 9617482
Alignment:
Q  240 taataatttgataaaattacataattcagtgtaattatatg 280  Q
    ||||||||||| ||||| |||||||||| ||||||||||||    
T  9617442 taataatttgagaaaatcacataattcaatgtaattatatg 9617482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 280
Target Start/End: Complemental strand, 10339209 - 10339136
Alignment:
Q  206 acacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtg-taattatatg 280  Q
    |||||||| ||||||||||||| ||||||   || | |||||||| ||||| ||||||||||||| ||||||||||    
T  10339209 acacgacatgaacactgacacgccgacacc--gcgattaatttgagaaaatcacataattcagtgttaattatatg 10339136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 11591917 - 11591881
Alignment:
Q  244 aatttgataaaattacataattcagtgtaattatatg 280  Q
    ||||||| ||||| |||||||||||||||||||||||    
T  11591917 aatttgagaaaatcacataattcagtgtaattatatg 11591881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 86
Target Start/End: Complemental strand, 12411178 - 12411126
Alignment:
Q  34 ccttggttaagttagaaaagacttgaaccatctcatccaagcactcttgggta 86  Q
    ||||||||||||||||| |||| ||  |||||||||| |||||||||| ||||    
T  12411178 ccttggttaagttagaagagacctgttccatctcatctaagcactcttaggta 12411126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 20576686 - 20576646
Alignment:
Q  238 gctaataatttgataaaattacataattcagtgtaattata 278  Q
    |||||||||| || |||||| ||||||||||||||||||||    
T  20576686 gctaataattcgagaaaattgcataattcagtgtaattata 20576646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 276
Target Start/End: Complemental strand, 25038122 - 25038086
Alignment:
Q  240 taataatttgataaaattacataattcagtgtaatta 276  Q
    ||||||||||| |||||||||||||| ||||||||||    
T  25038122 taataatttgagaaaattacataatttagtgtaatta 25038086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 280
Target Start/End: Complemental strand, 32320720 - 32320680
Alignment:
Q  240 taataatttgataaaattacataattcagtgtaattatatg 280  Q
    ||||||||||||||||| |||||||||| ||| ||||||||    
T  32320720 taataatttgataaaatcacataattcaatgtcattatatg 32320680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 4e-19; HSPs: 69)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 187 - 278
Target Start/End: Complemental strand, 398867 - 398778
Alignment:
Q  187 atacggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattata 278  Q
    |||||||| || |||||| |||||||||| ||||||||||| ||||||   ||||||||||||| ||||| |||||||||||||||||||||    
T  398867 atacggacgcggacaccggacacgacacggacactgacacgccgacacc--gctaataatttgaaaaaatcacataattcagtgtaattata 398778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 187 - 276
Target Start/End: Complemental strand, 6612273 - 6612186
Alignment:
Q  187 atacggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    ||||||||||| |||||| |||||||||| ||| ||||||| ||| ||| |  ||||||||||| |||||||||||||||||||||||||    
T  6612273 atacggacacgaacaccggacacgacacggacaatgacacgccgatacagt--taataatttgaaaaaattacataattcagtgtaatta 6612186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 187 - 276
Target Start/End: Complemental strand, 13011318 - 13011230
Alignment:
Q  187 atacggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttg-ataaaattacataattcagtgtaatta 276  Q
    |||| |||||| ||||||||||||||||||||||||||| | |||||||  |||||||||||| | ||||| |||||||| ||||||||||    
T  13011318 atacagacacggacaccgaacacgacacgaacactgacatgccgacaca--gctaataatttgaaaaaaatcacataattaagtgtaatta 13011230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 210 - 276
Target Start/End: Complemental strand, 38078740 - 38078676
Alignment:
Q  210 gacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    ||||||||||||||||||||||||||  ||||||||||||| ||||| |||||||||| ||||||||    
T  38078740 gacacgaacactgacacgtcgacaca--gctaataatttgaaaaaatcacataattcaatgtaatta 38078676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 272
Target Start/End: Complemental strand, 21366122 - 21366039
Alignment:
Q  187 atacggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgta 272  Q
    ||||||||| | |||||||||||||||||||||| |||||| || ||||  ||||||||||| | ||||| |||||||||||||||    
T  21366122 atacggacatgaacaccgaacacgacacgaacaccgacacgccggcaca--gctaataattttaaaaaataacataattcagtgta 21366039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 187 - 278
Target Start/End: Complemental strand, 1486811 - 1486722
Alignment:
Q  187 atacggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattata 278  Q
    ||||||||||| | |||| | |||||||| | |||||||||  ||||||  ||||||||||||| ||||| |||||||||||||||||||||    
T  1486811 atacggacacggataccggatacgacacggatactgacacgctgacaca--gctaataatttgaaaaaatcacataattcagtgtaattata 1486722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 233 - 280
Target Start/End: Original strand, 40181872 - 40181919
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||    
T  40181872 acactgctaataatttgagaaaatcacataattcagtgtaattatatg 40181919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 211 - 280
Target Start/End: Complemental strand, 19562699 - 19562632
Alignment:
Q  211 acacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    ||||||||||||||||| ||||||  |||||||||||||| |||||  |||| |||||||||||||||||    
T  19562699 acacgaacactgacacgccgacac--tgctaataatttgagaaaatctcatagttcagtgtaattatatg 19562632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 276
Target Start/End: Complemental strand, 42359551 - 42359464
Alignment:
Q  187 atacggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    ||||||||||| |||||| |||| ||||| |||||||||||  ||||||   |||||||||||| ||||| ||| |||||||||||||||    
T  42359551 atacggacacgaacaccgtacacaacacggacactgacacgctgacacat--ctaataatttgaaaaaatcacaaaattcagtgtaatta 42359464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 201 - 276
Target Start/End: Original strand, 1262855 - 1262928
Alignment:
Q  201 accgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||| ||||||||||||||| |||||| |||||||  ||||||||||||| ||||| |||||||||| | ||||||    
T  1262855 accggacacgacacgaacacggacacgccgacaca--gctaataatttgagaaaatcacataattcaatataatta 1262928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 208 - 270
Target Start/End: Original strand, 2851000 - 2851059
Alignment:
Q  208 acgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtg 270  Q
    |||||||| | |||||||||||   |||| |||||||||||||||||||||||||||||||||    
T  2851000 acgacacggatactgacacgtc---acaccgctaataatttgataaaattacataattcagtg 2851059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 189 - 276
Target Start/End: Complemental strand, 10572689 - 10572604
Alignment:
Q  189 acggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    ||||| ||| |||||| |||||||| ||||||||||||| ||||||    |||||||||||| ||||| ||||||||| |||||||||    
T  10572689 acggatacggacaccggacacgacatgaacactgacacgccgacacca--ctaataatttgagaaaatcacataattcggtgtaatta 10572604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 205 - 279
Target Start/End: Complemental strand, 16927269 - 16927197
Alignment:
Q  205 aacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattatat 279  Q
    ||||||||||  |||||||||||||| || |  ||||||||||||| ||||| | ||||||||||||||||||||    
T  16927269 aacacgacacagacactgacacgtcggcata--gctaataatttgaaaaaatcatataattcagtgtaattatat 16927197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 280
Target Start/End: Original strand, 17754312 - 17754359
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||| ||||||||||||| |||||||||||||||||||||| ||||||    
T  17754312 acaccgctaataatttgaaaaaattacataattcagtgtaactatatg 17754359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 280
Target Start/End: Original strand, 19324563 - 19324610
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||||||| ||||||||| ||||| |||||||||||||||||||||||    
T  19324563 acactgctgataatttgagaaaatcacataattcagtgtaattatatg 19324610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 206 - 276
Target Start/End: Complemental strand, 48450670 - 48450602
Alignment:
Q  206 acacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||||||||| ||||||||||| | |||||  ||||||||||||| ||||| |||||||| ||||||||||    
T  48450670 acacgacacggacactgacacgccaacaca--gctaataatttgaaaaaataacataatttagtgtaatta 48450602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 280
Target Start/End: Complemental strand, 10577837 - 10577746
Alignment:
Q  187 atacggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    ||||||||||| |||||| |||||||||| |||| |||||| |||||||  ||||||  ||| | ||||| ||| ||| |||||||||||||||    
T  10577837 atacggacacggacaccggacacgacacggacaccgacacgccgacaca--gctaatttttttagaaaatcacaaaatgcagtgtaattatatg 10577746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 280
Target Start/End: Complemental strand, 20157440 - 20157361
Alignment:
Q  199 acaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||||| ||||||||||  ||||||||| |||||||   ||||||||| ||| ||||| ||||||||||||||||| |||||    
T  20157440 acaccggacacgacacgggcactgacacatcgacacc--gctaataatgtgagaaaatcacataattcagtgtaatcatatg 20157361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 280
Target Start/End: Complemental strand, 34712440 - 34712394
Alignment:
Q  234 cactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    ||||||||||||||||| ||||| |||||||| ||||||||||||||    
T  34712440 cactgctaataatttgagaaaataacataatttagtgtaattatatg 34712394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 278
Target Start/End: Original strand, 36878448 - 36878507
Alignment:
Q  217 acactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattata 278  Q
    ||||||||||| ||||||   ||||||||||||| ||||| |||||||||||||||||||||    
T  36878448 acactgacacgccgacacc--gctaataatttgagaaaatcacataattcagtgtaattata 36878507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 276
Target Start/End: Original strand, 113289 - 113343
Alignment:
Q  220 ctgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||||||| |||||||  ||||||||||||| ||||| |||||||||||||||||||    
T  113289 ctgacacgccgacaca--gctaataatttgaaaaaatcacataattcagtgtaatta 113343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 239 - 280
Target Start/End: Complemental strand, 7918263 - 7918222
Alignment:
Q  239 ctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||||||||||| ||||| |||||||||||||||||||||||    
T  7918263 ctaataatttgagaaaatcacataattcagtgtaattatatg 7918222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 239 - 280
Target Start/End: Original strand, 9828051 - 9828092
Alignment:
Q  239 ctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||||||||||||||||| |||||||||||||||||| ||||    
T  9828051 ctaataatttgataaaatcacataattcagtgtaattttatg 9828092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 275
Target Start/End: Original strand, 15323124 - 15323206
Alignment:
Q  191 ggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatt 275  Q
    ||||||| |||||| |||||||| | ||||||||| ||||| ||| |  ||||||||||| ||||| |||||||| |||||||||    
T  15323124 ggacacggacaccggacacgacatggacactgacatgtcgatacagt--taataatttgaaaaaatcacataatttagtgtaatt 15323206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 239 - 276
Target Start/End: Complemental strand, 18190160 - 18190123
Alignment:
Q  239 ctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||||||||||| |||||||||||||||||||||||||    
T  18190160 ctaataatttgaaaaaattacataattcagtgtaatta 18190123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 235 - 276
Target Start/End: Complemental strand, 37055912 - 37055871
Alignment:
Q  235 actgctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||||||||||||||| |||||||||||||| ||||||||||    
T  37055912 actgctaataatttgagaaaattacataatttagtgtaatta 37055871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 280
Target Start/End: Complemental strand, 1864931 - 1864891
Alignment:
Q  240 taataatttgataaaattacataattcagtgtaattatatg 280  Q
    ||||||||||| ||||| |||||||||||||||||||||||    
T  1864931 taataatttgagaaaatcacataattcagtgtaattatatg 1864891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 276
Target Start/End: Complemental strand, 3490462 - 3490405
Alignment:
Q  217 acactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    ||||||||||| ||||||  |||||||||||||| |||| ||||| ||||||||||||||    
T  3490462 acactgacacgccgacac--tgctaataatttgagaaaactacattattcagtgtaatta 3490405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 280
Target Start/End: Complemental strand, 17425144 - 17425104
Alignment:
Q  240 taataatttgataaaattacataattcagtgtaattatatg 280  Q
    ||||||||||||||||| |||||||||| ||||||||||||    
T  17425144 taataatttgataaaatcacataattcaatgtaattatatg 17425104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 277
Target Start/End: Complemental strand, 25452206 - 25452162
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattat 277  Q
    |||||||||||||||||| |||||  |||||||||||||||||||    
T  25452206 acactgctaataatttgagaaaatctcataattcagtgtaattat 25452162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 276
Target Start/End: Original strand, 31015002 - 31015087
Alignment:
Q  189 acggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    ||||||||  ||||||  |||||||||  ||||||| || | |||||  ||||||||||||| ||||| |||||||||||||||||||    
T  31015002 acggacacagacaccgggcacgacacgggcactgacgcgcctacaca--gctaataatttgagaaaatcacataattcagtgtaatta 31015087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 278
Target Start/End: Original strand, 34298393 - 34298482
Alignment:
Q  187 atacggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattata 278  Q
    |||| |||||| |||||  |||||||||| | ||||||||  ||||||    |||||||||||| ||||| |||||||||||||||||||||    
T  34298393 atacagacacgtacaccagacacgacacggaaactgacacaccgacacca--ctaataatttgagaaaatcacataattcagtgtaattata 34298482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 206 - 272
Target Start/End: Complemental strand, 2896204 - 2896140
Alignment:
Q  206 acacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgta 272  Q
    |||| ||||| ||||||||||| ||||||   ||||||||||||| ||||| |||||||||||||||    
T  2896204 acacaacacggacactgacacgccgacacc--gctaataatttgagaaaatcacataattcagtgta 2896140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 206 - 276
Target Start/End: Complemental strand, 5376583 - 5376515
Alignment:
Q  206 acacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||||||||| ||||| ||||| ||||||   ||||||||||| | ||||| |||||||||||||||||||    
T  5376583 acacgacacggacactaacacgccgacacc--gctaataatttaagaaaataacataattcagtgtaatta 5376515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 280
Target Start/End: Complemental strand, 5898324 - 5898277
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||| ||||||||| ||| ||||| |||||||||||||||||||||||    
T  5898324 acaccgctaataatctgaaaaaatcacataattcagtgtaattatatg 5898277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 276
Target Start/End: Complemental strand, 5927440 - 5927355
Alignment:
Q  189 acggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    ||||| ||| |||||| |||||||||| ||||||||||| | | |||||||||||||||||| ||||| | |||||| | ||||||||    
T  5927440 acggatacggacaccggacacgacacggacactgacacg-cta-acactgctaataatttgaaaaaatcatataatttaatgtaatta 5927355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 280
Target Start/End: Original strand, 6427351 - 6427398
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||| ||||||||||||| ||||| |||||||||| ||||||||||||    
T  6427351 acaccgctaataatttgagaaaatcacataattcaatgtaattatatg 6427398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 280
Target Start/End: Complemental strand, 12443518 - 12443471
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||| ||||||||||||| ||||| |||||||||||||||||| ||||    
T  12443518 acacagctaataatttgagaaaatcacataattcagtgtaattgtatg 12443471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 280
Target Start/End: Original strand, 13436459 - 13436506
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||||||||||||||| |  |||| |||||||||||||||||||||||    
T  13436459 acactgctaataatttaaggaaatcacataattcagtgtaattatatg 13436506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 276
Target Start/End: Original strand, 21378579 - 21378622
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||| |||||||| |||| |||||||||||||||||||||||||    
T  21378579 acacagctaataaattgaaaaaattacataattcagtgtaatta 21378622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 280
Target Start/End: Complemental strand, 25098613 - 25098566
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||| ||| ||||||||| ||||| |||||||||||||||||||||||    
T  25098613 acaccgctgataatttgagaaaatcacataattcagtgtaattatatg 25098566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 240 - 279
Target Start/End: Original strand, 28674808 - 28674847
Alignment:
Q  240 taataatttgataaaattacataattcagtgtaattatat 279  Q
    ||||||||||| |||||||||||||||||| |||||||||    
T  28674808 taataatttgagaaaattacataattcagtataattatat 28674847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 280
Target Start/End: Complemental strand, 30847778 - 30847731
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||||||||||||||||| ||||| |||||||||| |||||| |||||    
T  30847778 acactgctaataatttgaaaaaatgacataattcaatgtaatcatatg 30847731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 276
Target Start/End: Complemental strand, 41877528 - 41877485
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||| ||||||||||||| |||||||||||||| ||||||||||    
T  41877528 acaccgctaataatttgagaaaattacataatttagtgtaatta 41877485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 276
Target Start/End: Complemental strand, 46348462 - 46348398
Alignment:
Q  210 gacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||||| ||||||||||| |||||||  ||||||||||||| ||||| | |||||| ||||||||||    
T  46348462 gacacggacactgacacgccgacaca--gctaataatttgaaaaaatcatataatttagtgtaatta 46348398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 276
Target Start/End: Complemental strand, 16297385 - 16297298
Alignment:
Q  187 atacggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    ||||||||| | ||| || |||||| ||| | |||||||||||||||||  || |||||| ||| ||||| ||| |||||||||||||||    
T  16297385 atacggacatggacatcggacacgatacggatactgacacgtcgacaca--gcaaataatatgaaaaaatcacaaaattcagtgtaatta 16297298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 238 - 280
Target Start/End: Original strand, 21038089 - 21038131
Alignment:
Q  238 gctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    ||||||||||| | ||||||||||||||||||||||| |||||    
T  21038089 gctaataatttaagaaaattacataattcagtgtaatcatatg 21038131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 242 - 280
Target Start/End: Original strand, 25361896 - 25361934
Alignment:
Q  242 ataatttgataaaattacataattcagtgtaattatatg 280  Q
    ||||||||| ||||| |||||||||||||||||||||||    
T  25361896 ataatttgagaaaatcacataattcagtgtaattatatg 25361934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 280
Target Start/End: Original strand, 38503277 - 38503368
Alignment:
Q  187 atacggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    ||||||||||| |||| | ||| |||||| ||||| ||||  ||||||   ||||||||||||| ||||| | ||| |||||||||||||||||    
T  38503277 atacggacacggacacgggacatgacacggacactaacacaccgacacc--gctaataatttgagaaaatcatatatttcagtgtaattatatg 38503368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 242 - 280
Target Start/End: Original strand, 44482240 - 44482278
Alignment:
Q  242 ataatttgataaaattacataattcagtgtaattatatg 280  Q
    ||||||||| ||||| |||||||||||||||||||||||    
T  44482240 ataatttgagaaaatcacataattcagtgtaattatatg 44482278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 267
Target Start/End: Complemental strand, 609560 - 609482
Alignment:
Q  187 atacggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattca 267  Q
    ||||||||||  ||| || ||||||||  |||||||||||| ||||||    |||||||||||| ||||||||||||||||    
T  609560 atacggacacagacatcggacacgacatcaacactgacacgccgacacca--ctaataatttgagaaaattacataattca 609482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 278
Target Start/End: Original strand, 5944232 - 5944329
Alignment:
Q  181 tatgaaatacggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaa--ttacataattcagtgtaattata 278  Q
    ||||||| || |||| | ||| || |||||||||  ||||||||||| || ||||  ||||||||||||| ||||  | |||||||||||||||||||||    
T  5944232 tatgaaacacagacaaggacatcggacacgacacagacactgacacgccgccaca--gctaataatttgaaaaaaaatcacataattcagtgtaattata 5944329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 278
Target Start/End: Complemental strand, 9629958 - 9629913
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattata 278  Q
    |||| ||||||||||||||||||| | |||||||||||| ||||||    
T  9629958 acaccgctaataatttgataaaatcatataattcagtgtgattata 9629913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 280
Target Start/End: Original strand, 10233260 - 10233301
Alignment:
Q  239 ctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    ||||||| |||| ||||| |||||||||||||||||||||||    
T  10233260 ctaataaattgagaaaatcacataattcagtgtaattatatg 10233301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 280
Target Start/End: Complemental strand, 14332694 - 14332653
Alignment:
Q  239 ctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||||||||||| ||||| |||||||| ||||||||||||||    
T  14332694 ctaataatttgagaaaatcacataatttagtgtaattatatg 14332653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 276
Target Start/End: Complemental strand, 24577238 - 24577201
Alignment:
Q  239 ctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||||||||||| ||||| |||||||||||||||||||    
T  24577238 ctaataatttgaaaaaatcacataattcagtgtaatta 24577201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 274
Target Start/End: Complemental strand, 26238170 - 26238129
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaat 274  Q
    |||| ||||||||||||| ||||| |||||||||||||||||    
T  26238170 acaccgctaataatttgagaaaataacataattcagtgtaat 26238129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 80
Target Start/End: Original strand, 29944580 - 29944621
Alignment:
Q  39 gttaagttagaaaagacttgaaccatctcatccaagcactct 80  Q
    |||||| ||||||||||||||||||| |||||||| ||||||    
T  29944580 gttaagatagaaaagacttgaaccatttcatccaaacactct 29944621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 276
Target Start/End: Original strand, 40917714 - 40917793
Alignment:
Q  193 acacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    ||||| |||||| |||||||||| | ||||||||| |||||||  ||||||||||||| |||||  || |||| ||||||||||    
T  40917714 acacggacaccggacacgacacggatactgacacgccgacaca--gctaataatttgaaaaaat--cacaattaagtgtaatta 40917793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 8010340 - 8010300
Alignment:
Q  238 gctaataatttgataaaattacataattcagtgtaattata 278  Q
    ||||||||||||| ||||||| |||||||||| ||||||||    
T  8010340 gctaataatttgaaaaaattatataattcagtataattata 8010300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 280
Target Start/End: Complemental strand, 17831603 - 17831542
Alignment:
Q  217 acactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    ||||||||||| ||||||   ||||||||||||| ||||| |||| |||||||||||| |||||    
T  17831603 acactgacacgccgacacc--gctaataatttgagaaaatcacattattcagtgtaatcatatg 17831542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 276
Target Start/End: Complemental strand, 22881688 - 22881631
Alignment:
Q  217 acactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    ||||||||||| |||||||   |||||||||||| ||||| |||||||| ||||||||||    
T  22881688 acactgacacgccgacacaa--ctaataatttgaaaaaatcacataatttagtgtaatta 22881631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 278
Target Start/End: Complemental strand, 23531880 - 23531791
Alignment:
Q  187 atacggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattata 278  Q
    ||||||||||| |||| | |||||| ||| |||| ||||| || | ||  |||||||||||||| || || |||||||||| ||||||||||    
T  23531880 atacggacacggacactggacacgatacggacaccgacacttcaatac--tgctaataatttgaaaatatcacataattcaatgtaattata 23531791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 23636096 - 23636060
Alignment:
Q  244 aatttgataaaattacataattcagtgtaattatatg 280  Q
    ||||||| |||||||||||||||||||||||| ||||    
T  23636096 aatttgagaaaattacataattcagtgtaattgtatg 23636060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 280
Target Start/End: Original strand, 23804436 - 23804476
Alignment:
Q  240 taataatttgataaaattacataattcagtgtaattatatg 280  Q
    ||||||||||||||||||| |||||| | ||||||||||||    
T  23804436 taataatttgataaaattatataatttaatgtaattatatg 23804476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 276
Target Start/End: Complemental strand, 31672967 - 31672910
Alignment:
Q  217 acactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    ||||||||||  |||||||  ||||||||||||| ||||| || ||||||||||||||||    
T  31672967 acactgacacaccgacaca--gctaataatttgaaaaaatcacttaattcagtgtaatta 31672910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 276
Target Start/End: Complemental strand, 40258984 - 40258948
Alignment:
Q  240 taataatttgataaaattacataattcagtgtaatta 276  Q
    ||||||||||| ||||| |||||||||||||||||||    
T  40258984 taataatttgaaaaaatcacataattcagtgtaatta 40258948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 276
Target Start/End: Original strand, 47989474 - 47989541
Alignment:
Q  206 acacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||||||||  ||||||||||| ||||||| |   |||||||| | ||||| |||||||||||||||||||    
T  47989474 acacgacacagacactgacacgccgacacaat---aataatttaaaaaaatcacataattcagtgtaatta 47989541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 280
Target Start/End: Original strand, 52903257 - 52903297
Alignment:
Q  240 taataatttgataaaattacataattcagtgtaattatatg 280  Q
    ||||||||| ||||||| | |||||||||||||||||||||    
T  52903257 taataatttaataaaatcatataattcagtgtaattatatg 52903297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 2e-18; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 187 - 273
Target Start/End: Complemental strand, 13287501 - 13287417
Alignment:
Q  187 atacggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaa 273  Q
    ||||||||||| |||||| |||||||||| ||||| |||||||||||||  | ||||||||||| ||||| ||||||||||||||||    
T  13287501 atacggacacggacaccggacacgacacggacactaacacgtcgacaca--gataataatttgaaaaaatcacataattcagtgtaa 13287417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 186 - 276
Target Start/End: Complemental strand, 21191159 - 21191071
Alignment:
Q  186 aatacggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||||||||||  |||||| |||||||||| ||||||||| | |||||||  ||||||||||||| ||||| |||||||||||||||||||    
T  21191159 aatacggacactgacaccggacacgacacggacactgacatgccgacaca--gctaataatttgaaaaaatcacataattcagtgtaatta 21191071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 187 - 276
Target Start/End: Original strand, 21522707 - 21522794
Alignment:
Q  187 atacggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||||||||||  ||||| |||||||||| ||||||||||| |||||||  ||||||||||| | ||||| |||||||||||||||||||    
T  21522707 atacggacacggtcaccggacacgacacggacactgacacgccgacaca--gctaataattttaaaaaataacataattcagtgtaatta 21522794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 187 - 276
Target Start/End: Original strand, 21533273 - 21533360
Alignment:
Q  187 atacggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||||||||||  ||||| |||||||||| ||||||||||| |||||||  ||||||||||| | ||||| |||||||||||||||||||    
T  21533273 atacggacacggtcaccggacacgacacggacactgacacgccgacaca--gctaataattttaaaaaataacataattcagtgtaatta 21533360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 189 - 278
Target Start/End: Original strand, 22013373 - 22013460
Alignment:
Q  189 acggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattata 278  Q
    ||||| ||| |||||| |||||||||| ||||||||||| |||||||  ||||||||||||  |||||||||||||| ||||||||||||    
T  22013373 acggatacggacaccggacacgacacggacactgacacgccgacaca--gctaataatttggaaaaattacataatttagtgtaattata 22013460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 210 - 276
Target Start/End: Original strand, 43001780 - 43001844
Alignment:
Q  210 gacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||||| ||||||||| ||||||||  |||||||||||||| |||||||||||||||||||||||||    
T  43001780 gacacggacactgacatgtcgacac--tgctaataatttgaaaaaattacataattcagtgtaatta 43001844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 276
Target Start/End: Complemental strand, 24906403 - 24906316
Alignment:
Q  187 atacggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||| ||||||  ||||| |||||||||||||||||||||| | |||||  | ||||||||||| ||||| |||||||||||||||||||    
T  24906403 atacagacacgagcaccggacacgacacgaacactgacacgccaacaca--gataataatttgaaaaaatgacataattcagtgtaatta 24906316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 276
Target Start/End: Original strand, 6247573 - 6247666
Alignment:
Q  181 tatgaaatacggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    ||||||| |||||  || |||||| |||||| ||| ||||||||||| |||||||   |||||||||||| ||||| |||||||||||||||||||    
T  6247573 tatgaaacacggatgcggacaccggacacgatacgcacactgacacgccgacacat--ctaataatttgaaaaaatcacataattcagtgtaatta 6247666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 229 - 280
Target Start/End: Original strand, 36838540 - 36838591
Alignment:
Q  229 cgacacactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||||||| ||||||||||||| |||||||||||||| ||||||||||||||    
T  36838540 cgacacaccgctaataatttgagaaaattacataatttagtgtaattatatg 36838591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 191 - 276
Target Start/End: Complemental strand, 6326395 - 6326312
Alignment:
Q  191 ggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    ||||||| | |||| |||||||||| ||||||||||| |||||    |||| |||||||| |||||||||||||||||||||||||    
T  6326395 ggacacggataccggacacgacacggacactgacacgccgacatc--gctagtaatttgagaaaattacataattcagtgtaatta 6326312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 272
Target Start/End: Complemental strand, 19552632 - 19552562
Alignment:
Q  200 caccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgta 272  Q
    |||||||||||||||| ||||||||||| |||||||  | ||||||||||| ||||| |||||||| ||||||    
T  19552632 caccgaacacgacacggacactgacacgccgacaca--gttaataatttgaaaaaatcacataattaagtgta 19552562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 189 - 276
Target Start/End: Complemental strand, 37328944 - 37328859
Alignment:
Q  189 acggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    ||||||||| ||||||||||||||||| ||||||| ||  |||||||  || |||||||||  ||||| ||| |||||||||||||||    
T  37328944 acggacacggacaccgaacacgacacggacactgatacaccgacaca--gcaaataatttgtaaaaatcacaaaattcagtgtaatta 37328859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 280
Target Start/End: Complemental strand, 6471947 - 6471900
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||| ||||||||||||| ||||| |||||||||||||||||||||||    
T  6471947 acacggctaataatttgagaaaatcacataattcagtgtaattatatg 6471900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 276
Target Start/End: Original strand, 14674249 - 14674313
Alignment:
Q  210 gacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||||| ||||||||||| |||||||  ||||||||||||| ||||| |||||||| ||||||||||    
T  14674249 gacacggacactgacacgccgacaca--gctaataatttgaaaaaatcacataatttagtgtaatta 14674313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 276
Target Start/End: Complemental strand, 21576824 - 21576760
Alignment:
Q  210 gacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||||||||||||| ||| | |||||  ||||||||||||| ||||| |||||||||||||||||||    
T  21576824 gacacgaacactgatacgccaacaca--gctaataatttgaaaaaatcacataattcagtgtaatta 21576760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 276
Target Start/End: Original strand, 27932236 - 27932279
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||| ||||||||||||| |||||||||||||||||||||||||    
T  27932236 acaccgctaataatttgagaaaattacataattcagtgtaatta 27932279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 280
Target Start/End: Complemental strand, 41091315 - 41091268
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    ||||||||||| |||||| ||||| |||||||||||||||||||||||    
T  41091315 acactgctaatgatttgagaaaatcacataattcagtgtaattatatg 41091268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 278
Target Start/End: Complemental strand, 5468029 - 5467991
Alignment:
Q  240 taataatttgataaaattacataattcagtgtaattata 278  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  5468029 taataatttgataaaatcacataattcagtgtaattata 5467991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 280
Target Start/End: Complemental strand, 16203885 - 16203806
Alignment:
Q  199 acaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||||||||| |||||| ||||| ||| | ||||||  |||||||||||||| |||||  ||||||| ||||||||||||||    
T  16203885 acaccgaacatgacacggacactaacatgccgacac--tgctaataatttgagaaaatctcataatttagtgtaattatatg 16203806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 280
Target Start/End: Complemental strand, 3752017 - 3751941
Alignment:
Q  201 accgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||| |||||||||||||||| ||| |||||||||   |||||||||||| ||||| |||||| | ||| ||||||||||    
T  3752017 accggacacgacacgaacactaacaagtcgacaca---ctaataatttgagaaaatcacataactaagtataattatatg 3751941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 15382434 - 15382500
Alignment:
Q  187 atacggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaa 255  Q
    ||||||||||| |||||| |||||||||| ||| ||||||| |||||||  ||||||||||||| ||||    
T  15382434 atacggacacggacaccggacacgacacggacaatgacacgccgacaca--gctaataatttgaaaaaa 15382500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 276
Target Start/End: Original strand, 31084310 - 31084367
Alignment:
Q  217 acactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    ||||||||||| |||||||  ||||||||||||| ||||| |||||||||| ||||||||    
T  31084310 acactgacacgccgacaca--gctaataatttgaaaaaatcacataattcaatgtaatta 31084367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 276
Target Start/End: Original strand, 39698528 - 39698585
Alignment:
Q  217 acactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||||||||||  ||||||  ||||||||||||| ||||| |||||||||||||||||||    
T  39698528 acactgacacgctgacaca--gctaataatttgaaaaaatcacataattcagtgtaatta 39698585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 271
Target Start/End: Complemental strand, 40000616 - 40000555
Alignment:
Q  208 acgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgt 271  Q
    |||||||| ||||||||| |||||||| ||  ||||||||||| ||||| ||||||||||||||    
T  40000616 acgacacggacactgacatgtcgacactct--taataatttgaaaaaatcacataattcagtgt 40000555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 280
Target Start/End: Original strand, 3966504 - 3966551
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||| ||||||||||||| ||||| ||| |||||||||||||||||||    
T  3966504 acaccgctaataatttgagaaaatcacacaattcagtgtaattatatg 3966551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 187 - 277
Target Start/End: Original strand, 6770500 - 6770588
Alignment:
Q  187 atacggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattat 277  Q
    ||||||| ||| |||||||||| |||||| ||||||||||   ||||||   |||||||||| | ||||| ||||||||||||||| ||||    
T  6770500 atacggatacggacaccgaacatgacacggacactgacacactgacacaa--ctaataatttaagaaaatcacataattcagtgtacttat 6770588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 280
Target Start/End: Complemental strand, 12264887 - 12264840
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||| |||||| |||||| |||||||||| ||||||||||||||||||    
T  12264887 acaccgctaattatttgagaaaattacatgattcagtgtaattatatg 12264840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 206 - 280
Target Start/End: Complemental strand, 15410531 - 15410459
Alignment:
Q  206 acacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||||||||| ||||||||||| ||||||   ||||||||||| | ||||||| || |||||||||||| |||||    
T  15410531 acacgacacggacactgacacgccgacacc--gctaataatttaagaaaattatatgattcagtgtaatcatatg 15410459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 280
Target Start/End: Complemental strand, 18421899 - 18421852
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||||||| ||||||||| ||||| ||||||| |||||||||||||||    
T  18421899 acactgctgataatttgagaaaatcacataatccagtgtaattatatg 18421852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 280
Target Start/End: Complemental strand, 30502446 - 30502399
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||| ||||||||||||| ||||| || ||||||||||||||||||||    
T  30502446 acaccgctaataatttgagaaaatcacttaattcagtgtaattatatg 30502399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 280
Target Start/End: Complemental strand, 30542789 - 30542742
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||| ||||||||||||| ||||| || ||||||||||||||||||||    
T  30542789 acaccgctaataatttgagaaaatcacttaattcagtgtaattatatg 30542742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 276
Target Start/End: Original strand, 41633736 - 41633779
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||| ||||||||||||| ||| |||||||||||||||||||||    
T  41633736 acacagctaataatttgaaaaatttacataattcagtgtaatta 41633779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 240 - 278
Target Start/End: Complemental strand, 28588725 - 28588687
Alignment:
Q  240 taataatttgataaaattacataattcagtgtaattata 278  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  28588725 taataatttgagaaaatcacataattcagtgtaattata 28588687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 276
Target Start/End: Original strand, 41995428 - 41995515
Alignment:
Q  187 atacggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    ||||||||||| |||| | | |||||||  ||||||||||| |||||||   ||||||||| || ||||| |||||||||| ||||||||    
T  41995428 atacggacacggacactggatacgacacagacactgacacgccgacaca--actaataattcgaaaaaatcacataattcaatgtaatta 41995515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 274
Target Start/End: Original strand, 42469180 - 42469263
Alignment:
Q  189 acggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaat 274  Q
    ||||||||| ||||||||||||||||| | | ||||||| ||  |||| | ||||||||||| ||||| ||||| || ||||||||    
T  42469180 acggacacggacaccgaacacgacacggataatgacacgccg--acacggataataatttgagaaaatgacatattttagtgtaat 42469263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 274
Target Start/End: Original strand, 2419858 - 2419899
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaat 274  Q
    |||||| ||||||||||| ||||||||| |||||||||||||    
T  2419858 acactgataataatttgagaaaattacacaattcagtgtaat 2419899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 279
Target Start/End: Original strand, 10022642 - 10022679
Alignment:
Q  242 ataatttgataaaattacataattcagtgtaattatat 279  Q
    ||||||||||||||| | ||||||||||||||||||||    
T  10022642 ataatttgataaaatcatataattcagtgtaattatat 10022679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 279
Target Start/End: Complemental strand, 17593775 - 17593734
Alignment:
Q  238 gctaataatttgataaaattacataattcagtgtaattatat 279  Q
    ||||||||||||| ||||| || |||||||||||||||||||    
T  17593775 gctaataatttgagaaaatcacgtaattcagtgtaattatat 17593734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 280
Target Start/End: Complemental strand, 24273078 - 24273041
Alignment:
Q  243 taatttgataaaattacataattcagtgtaattatatg 280  Q
    |||||||| ||||| |||||||||||||||||||||||    
T  24273078 taatttgagaaaatcacataattcagtgtaattatatg 24273041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 280
Target Start/End: Original strand, 24389136 - 24389173
Alignment:
Q  243 taatttgataaaattacataattcagtgtaattatatg 280  Q
    |||||||| ||||| |||||||||||||||||||||||    
T  24389136 taatttgagaaaatcacataattcagtgtaattatatg 24389173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 280
Target Start/End: Original strand, 35017044 - 35017085
Alignment:
Q  239 ctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||||||||||| ||||| |||||||| ||||||||||||||    
T  35017044 ctaataatttgagaaaatcacataatttagtgtaattatatg 35017085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 280
Target Start/End: Original strand, 27144450 - 27144511
Alignment:
Q  217 acactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    ||||||||||| ||||||   |||||||||||||  |||| |||||||| ||||||||||||||    
T  27144450 acactgacacgccgacacc--gctaataatttgaggaaatcacataatttagtgtaattatatg 27144511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 280
Target Start/End: Complemental strand, 32630786 - 32630746
Alignment:
Q  240 taataatttgataaaattacataattcagtgtaattatatg 280  Q
    ||||||||||| ||||||| |||||||| ||||||||||||    
T  32630786 taataatttgagaaaattatataattcaatgtaattatatg 32630746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 278
Target Start/End: Complemental strand, 36642852 - 36642775
Alignment:
Q  199 acaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattata 278  Q
    |||||| |||||||||| ||||||||||| |||||||  | ||||||||||| ||| | ||||| || ||||||| ||||    
T  36642852 acaccggacacgacacggacactgacacgccgacaca--gttaataatttgaaaaagtgacatattttagtgtaaatata 36642775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 280
Target Start/End: Complemental strand, 38749614 - 38749574
Alignment:
Q  240 taataatttgataaaattacataattcagtgtaattatatg 280  Q
    ||||||||||| ||||| |||||||||| ||||||||||||    
T  38749614 taataatttgaaaaaatgacataattcaatgtaattatatg 38749574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 280
Target Start/End: Original strand, 39205867 - 39205928
Alignment:
Q  217 acactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||| |||||||||||||  |||||||||||||| ||||| | ||||||  |||||||||||||    
T  39205867 acacggacacgtcgacac--tgctaataatttgagaaaatcatataattaggtgtaattatatg 39205928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 187 - 276
Target Start/End: Complemental strand, 564 - 477
Alignment:
Q  187 atacggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    ||||||||||| |||||||||||| |||| ||||||| ||| ||||||  |||||||||||||| ||||| ||| |||||||||||||||    
T  564 atacggacacggacaccgaacacgccacggacactgatacgccgacac--tgctaataatttgaaaaaatcacaaaattcagtgtaatta 477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 7e-18; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 187 - 276
Target Start/End: Complemental strand, 23293088 - 23293001
Alignment:
Q  187 atacggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    ||||||||||| |||||| |||||||||| ||| ||||||| |||||||  ||||||||||||| ||||| |||||||||||| ||||||    
T  23293088 atacggacacggacaccggacacgacacggacaatgacacgccgacaca--gctaataatttgaaaaaatcacataattcagtataatta 23293001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 278
Target Start/End: Original strand, 24343469 - 24343553
Alignment:
Q  192 gacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattata 278  Q
    |||||| |||||| |||||||||| || | |||||| ||||||   | ||||||||||| |||||||||||||||||||||||||||    
T  24343469 gacacggacaccggacacgacacggacgccgacacgccgacacg--gataataatttgagaaaattacataattcagtgtaattata 24343553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 276
Target Start/End: Complemental strand, 27706279 - 27706192
Alignment:
Q  187 atacggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    ||||||||||| |||||  |||||||| | ||||||||||||||||||| |  ||||||||| | ||||| |||||||| ||||||||||    
T  27706279 atacggacacggacaccagacacgacagggacactgacacgtcgacacaat--taataatttaaaaaaatcacataatttagtgtaatta 27706192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 199 - 280
Target Start/End: Complemental strand, 40179726 - 40179647
Alignment:
Q  199 acaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||||||||| |||||| |||||||||||| |||||  |  ||||| ||||| ||||| |||||||||||||||||||||||    
T  40179726 acaccgaacatgacacggacactgacacgttgacaccat--taatagtttgaaaaaatcacataattcagtgtaattatatg 40179647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 278
Target Start/End: Original strand, 30838186 - 30838256
Alignment:
Q  206 acacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattata 278  Q
    ||||| |||| ||||||| ||||||| ||  |||||||||||||||||||||| |||||| ||||||||||||    
T  30838186 acacggcacggacactgatacgtcgatac--tgctaataatttgataaaattatataatttagtgtaattata 30838256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 187 - 278
Target Start/End: Complemental strand, 35158087 - 35157998
Alignment:
Q  187 atacggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattata 278  Q
    ||||||||||| |||||| |||| ||||| ||||||||||| |||| ||   |||||||||||  ||||| |||||||| ||||||||||||    
T  35158087 atacggacacggacaccggacacaacacggacactgacacgccgacgca--actaataatttggaaaaatcacataatttagtgtaattata 35157998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 280
Target Start/End: Original strand, 15029766 - 15029813
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||||||||||||||||| || || |||||||||||||||||||||||    
T  15029766 acactgctaataatttgaaaatatcacataattcagtgtaattatatg 15029813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 276
Target Start/End: Original strand, 21945467 - 21945547
Alignment:
Q  194 cacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||| |||||| ||| |||||  ||||||||| | |||||||  ||||||||||||| ||||| |||||||||||||||||||    
T  21945467 cacggacaccggacatgacacagacactgacatgccgacaca--gctaataatttgaaaaaatgacataattcagtgtaatta 21945547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 280
Target Start/End: Complemental strand, 35952674 - 35952628
Alignment:
Q  234 cactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    ||||||||||||||||||||||| | |||||||| ||||||||||||    
T  35952674 cactgctaataatttgataaaatcatataattcaatgtaattatatg 35952628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 280
Target Start/End: Original strand, 36635293 - 36635372
Alignment:
Q  199 acaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||||| ||||||| || ||||||||||| | ||||    |||||||||||| ||||| |||||||||||||||||||||||    
T  36635293 acaccggacacgactcggacactgacacgccaacacca--ctaataatttgagaaaatcacataattcagtgtaattatatg 36635372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 233 - 278
Target Start/End: Complemental strand, 8423776 - 8423731
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattata 278  Q
    |||| ||||||||||||| ||||| |||||||||||||||||||||    
T  8423776 acaccgctaataatttgagaaaatcacataattcagtgtaattata 8423731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 206 - 270
Target Start/End: Complemental strand, 11651217 - 11651155
Alignment:
Q  206 acacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtg 270  Q
    |||||| ||| |||||||||||||||||||  ||||||||||| | ||||| |||||||||||||    
T  11651217 acacgatacggacactgacacgtcgacaca--gctaataatttaaaaaaatcacataattcagtg 11651155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 233 - 278
Target Start/End: Complemental strand, 14126169 - 14126124
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattata 278  Q
    |||||| ||||||||||||||| | |||||||||||||||||||||    
T  14126169 acactgttaataatttgataaagtcacataattcagtgtaattata 14126124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 280
Target Start/End: Original strand, 903930 - 903970
Alignment:
Q  240 taataatttgataaaattacataattcagtgtaattatatg 280  Q
    ||||||||||| ||||| |||||||||||||||||||||||    
T  903930 taataatttgagaaaatcacataattcagtgtaattatatg 903970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 278
Target Start/End: Complemental strand, 12895376 - 12895287
Alignment:
Q  187 atacggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattata 278  Q
    ||||||| ||| |||||| | |||||||||||| ||||||| |||||||    ||||||||||| ||||| ||||||||  |||||||||||    
T  12895376 atacggatacggacaccggatacgacacgaacaatgacacgccgacaca--aataataatttgaaaaaatcacataattttgtgtaattata 12895287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 276
Target Start/End: Original strand, 20633442 - 20633526
Alignment:
Q  187 atacggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    ||||||||||| |||||  |||||| ||| ||||||||||||||  |||| ||||||||||||| |||   |||||||||| ||||||||    
T  20633442 atacggacacggacaccagacacgatacggacactgacacgtcg--acaccgctaataatttgaaaaa---acataattcaatgtaatta 20633526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 277
Target Start/End: Complemental strand, 21873429 - 21873385
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattat 277  Q
    ||||||| |||||||||||||||| ||||||||||||| ||||||    
T  21873429 acactgcaaataatttgataaaatcacataattcagtgaaattat 21873385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 277
Target Start/End: Complemental strand, 21929290 - 21929246
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattat 277  Q
    ||||||| |||||||||||||||| ||||||||||||| ||||||    
T  21929290 acactgcaaataatttgataaaatcacataattcagtgaaattat 21929246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 280
Target Start/End: Complemental strand, 22440651 - 22440611
Alignment:
Q  240 taataatttgataaaattacataattcagtgtaattatatg 280  Q
    ||||||||||| ||||| |||||||||||||||||||||||    
T  22440651 taataatttgagaaaatcacataattcagtgtaattatatg 22440611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 276
Target Start/End: Original strand, 30298926 - 30298991
Alignment:
Q  210 gacacgaacactgacacgtcgacacactgctaataatttgataaaatt-acataattcagtgtaatta 276  Q
    |||||| ||||||||||| |||||||  ||||||||||||| |||| | |||||||||||||||||||    
T  30298926 gacacggacactgacacgccgacaca--gctaataatttgaaaaaaatgacataattcagtgtaatta 30298991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 276
Target Start/End: Original strand, 30327794 - 30327859
Alignment:
Q  210 gacacgaacactgacacgtcgacacactgctaataatttgataaaatt-acataattcagtgtaatta 276  Q
    |||||| ||||||||||| |||||||  ||||||||||||| |||| | |||||||||||||||||||    
T  30327794 gacacggacactgacacgccgacaca--gctaataatttgaaaaaaatgacataattcagtgtaatta 30327859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 279
Target Start/End: Original strand, 37698719 - 37698759
Alignment:
Q  239 ctaataatttgataaaattacataattcagtgtaattatat 279  Q
    |||||||||||| ||||||| ||||||||||||||||||||    
T  37698719 ctaataatttgagaaaattatataattcagtgtaattatat 37698759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 277
Target Start/End: Original strand, 56257934 - 56257978
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattat 277  Q
    |||||||||||||||||| ||||| | ||||||||||||||||||    
T  56257934 acactgctaataatttgagaaaatcatataattcagtgtaattat 56257978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 276
Target Start/End: Complemental strand, 2362033 - 2361990
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||| ||||||||||||| |||||||||||||| ||||||||||    
T  2362033 acacagctaataatttgaaaaaattacataatttagtgtaatta 2361990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 280
Target Start/End: Complemental strand, 15659818 - 15659771
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||||||||||||||||| |||||  |||||||| |||||||||||||    
T  15659818 acactgctaataatttgagaaaatctcataattcggtgtaattatatg 15659771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 276
Target Start/End: Original strand, 29205445 - 29205488
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||| ||||||||||||| ||||| |||||||||||||||||||    
T  29205445 acacggctaataatttgaaaaaatcacataattcagtgtaatta 29205488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 280
Target Start/End: Original strand, 40613451 - 40613498
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||| ||||||| ||||| ||||| |||||||||||||||||||||||    
T  40613451 acaccgctaatattttgagaaaatcacataattcagtgtaattatatg 40613498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 276
Target Start/End: Original strand, 51701259 - 51701302
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||| ||||||||||||| |||||||||||||| ||||||||||    
T  51701259 acacagctaataatttgaaaaaattacataattgagtgtaatta 51701302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 239 - 278
Target Start/End: Complemental strand, 54580075 - 54580036
Alignment:
Q  239 ctaataatttgataaaattacataattcagtgtaattata 278  Q
    |||||||||||| ||||| |||||||||||||||||||||    
T  54580075 ctaataatttgaaaaaatcacataattcagtgtaattata 54580036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 238 - 276
Target Start/End: Complemental strand, 11596405 - 11596367
Alignment:
Q  238 gctaataatttgataaaattacataattcagtgtaatta 276  Q
    ||||||||||||| ||||| |||||||||||||||||||    
T  11596405 gctaataatttgaaaaaatcacataattcagtgtaatta 11596367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 238 - 276
Target Start/End: Complemental strand, 28964301 - 28964263
Alignment:
Q  238 gctaataatttgataaaattacataattcagtgtaatta 276  Q
    ||||||||||||| ||||| |||||||||||||||||||    
T  28964301 gctaataatttgaaaaaatcacataattcagtgtaatta 28964263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 278
Target Start/End: Complemental strand, 16402306 - 16402224
Alignment:
Q  194 cacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattata 278  Q
    |||| |||||| |||||||| ||||||||||| | ||||||   | ||||||||||| ||||| |||| || |||||||||||||    
T  16402306 cacggacaccgcacacgacatgaacactgacatgccgacacg--gataataatttgagaaaataacatgatacagtgtaattata 16402224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 280
Target Start/End: Complemental strand, 18576093 - 18576048
Alignment:
Q  235 actgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||||| ||||||||| ||||| ||||||||| |||||||||||||    
T  18576093 actgctgataatttgagaaaatcacataattcggtgtaattatatg 18576048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 274
Target Start/End: Complemental strand, 20743353 - 20743295
Alignment:
Q  214 cgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaat 274  Q
    |||||||||||||| ||||||   | ||||||||||| ||||| |||||||||||||||||    
T  20743353 cgaacactgacacgccgacacg--gataataatttgagaaaatgacataattcagtgtaat 20743295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 277
Target Start/End: Original strand, 32910559 - 32910596
Alignment:
Q  240 taataatttgataaaattacataattcagtgtaattat 277  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  32910559 taataatttgagaaaatgacataattcagtgtaattat 32910596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 276
Target Start/End: Original strand, 47263960 - 47264030
Alignment:
Q  204 gaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    ||||||||||| || | ||||||||||||| |  ||||||||||||  ||||| ||||||||| |||||||||    
T  47263960 gaacacgacacaaatattgacacgtcgacata--gctaataatttgtaaaaatcacataattctgtgtaatta 47264030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 276
Target Start/End: Original strand, 4383355 - 4383411
Alignment:
Q  217 acactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    ||||||||||||||| |||   |||||||||||| ||||| |||||||||||||||||||    
T  4383355 acactgacacgtcgatacaa--ctaataatttga-aaaatcacataattcagtgtaatta 4383411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 280
Target Start/End: Complemental strand, 5775409 - 5775369
Alignment:
Q  240 taataatttgataaaattacataattcagtgtaattatatg 280  Q
    ||||||||||| ||||| |||||||| ||||||||||||||    
T  5775409 taataatttgagaaaatcacataattaagtgtaattatatg 5775369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 280
Target Start/End: Original strand, 7670652 - 7670732
Alignment:
Q  201 accgaacacgacacgaacactgacacgtcgac-acactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||| ||||||| || | |||||||||||| | ||| |||||||| ||||| ||||| |||||||||||| ||| ||||||    
T  7670652 accggacacgacgcggaaactgacacgtcgccgacattgctaatagtttgagaaaatcacataattcagtataactatatg 7670732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 273
Target Start/End: Original strand, 12077808 - 12077869
Alignment:
Q  210 gacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaa 273  Q
    |||||||||||||||||||| | ||  || ||||||||||| ||||| |||||||||| |||||    
T  12077808 gacacgaacactgacacgtcaatac--tgttaataatttgagaaaatcacataattcaatgtaa 12077869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 277
Target Start/End: Original strand, 16189710 - 16189754
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattat 277  Q
    |||| ||||| ||||||| ||||| ||||||||||||||||||||    
T  16189710 acaccgctaaaaatttgagaaaatcacataattcagtgtaattat 16189754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 277
Target Start/End: Complemental strand, 17425447 - 17425403
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattat 277  Q
    ||||| |||||||||||| |||||  |||||||||||||||||||    
T  17425447 acactcctaataatttgagaaaatcgcataattcagtgtaattat 17425403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 273
Target Start/End: Original strand, 28720852 - 28720916
Alignment:
Q  206 acacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaa 273  Q
    |||||||||||||||||||| | |||||||  ||||||||||||| ||||| | ||||| ||||||||    
T  28720852 acacgacacgaacactgacatgccgacaca--gctaataatttga-aaaatcatataatgcagtgtaa 28720916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 273
Target Start/End: Complemental strand, 34515957 - 34515892
Alignment:
Q  206 acacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaa 273  Q
    |||| ||||||||||||||||||||  |||| | ||||||||  | ||||| ||||||||||||||||    
T  34515957 acacaacacgaacactgacacgtcg--acacggataataattcaagaaaatgacataattcagtgtaa 34515892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 276
Target Start/End: Original strand, 49431001 - 49431070
Alignment:
Q  206 acacgacacgaacactgacacgtcgacacactgctaataatttgataaaatt-acataattcagtgtaatta 276  Q
    ||||||| || ||| ||||||| |||||||  ||||||||||||| |||| | |||||||||||||||||||    
T  49431001 acacgactcggacagtgacacgccgacaca--gctaataatttgaaaaaaatcacataattcagtgtaatta 49431070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 7e-18; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 187 - 276
Target Start/End: Complemental strand, 4991069 - 4990982
Alignment:
Q  187 atacggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    ||||||||||| ||||||||||||||||| | ||||||||  ||||||   ||||||| ||||| |||||||||||||||||||||||||    
T  4991069 atacggacacggacaccgaacacgacacggagactgacactccgacacc--gctaatagtttgagaaaattacataattcagtgtaatta 4990982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 187 - 273
Target Start/End: Complemental strand, 3164127 - 3164043
Alignment:
Q  187 atacggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaa 273  Q
    |||| |||||| |||||| |||||||||| ||| || ||||||||||||  ||||||||||||| ||||| ||||||||||||||||    
T  3164127 atacagacacggacaccggacacgacacggacaatggcacgtcgacaca--gctaataatttgaaaaaatcacataattcagtgtaa 3164043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 187 - 273
Target Start/End: Complemental strand, 16000118 - 16000034
Alignment:
Q  187 atacggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaa 273  Q
    ||||||||||| ||||||||||||||||  ||||||||||| |||||||   |||||||||| | ||||| ||||||||||||||||    
T  16000118 atacggacacggacaccgaacacgacacagacactgacacgccgacaca--actaataatttaaaaaaataacataattcagtgtaa 16000034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 278
Target Start/End: Complemental strand, 24205138 - 24205054
Alignment:
Q  192 gacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattata 278  Q
    |||||| |||||| |||||||||| ||||||||||| ||||||   | ||||||||||| ||||| ||||||| |||||||||||||    
T  24205138 gacacggacaccggacacgacacggacactgacacgccgacacg--gataataatttgagaaaatgacataatacagtgtaattata 24205054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 276
Target Start/End: Original strand, 28917965 - 28918045
Alignment:
Q  194 cacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||| |||||| |||||||||| | ||||||||| ||||| |  ||||||||||||| ||||| |||||||||||||||||||    
T  28917965 cacggacaccggacacgacacggaaactgacacgccgacata--gctaataatttgaaaaaatcacataattcagtgtaatta 28918045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 4987365 - 4987306
Alignment:
Q  215 gaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    ||||||||||||| |||||||  ||||||||||||| ||||| |||||||||||||||||||    
T  4987365 gaacactgacacgccgacaca--gctaataatttgaaaaaatcacataattcagtgtaatta 4987306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 189 - 278
Target Start/End: Original strand, 8383216 - 8383303
Alignment:
Q  189 acggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattata 278  Q
    ||||||||| |||| | |||||||||| ||| ||||||| ||||||   ||||||||||||| ||||| | |||||||||||||||||||    
T  8383216 acggacacggacactggacacgacacggacattgacacgccgacacc--gctaataatttgagaaaatcatataattcagtgtaattata 8383303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 191 - 276
Target Start/End: Complemental strand, 15796392 - 15796309
Alignment:
Q  191 ggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    ||||||| |||||| |||||||||| ||| ||||||| ||||||| |  ||||||||||| ||||| | |||||||||||||||||    
T  15796392 ggacacggacaccggacacgacacggacaatgacacgccgacacagt--taataatttgaaaaaatcatataattcagtgtaatta 15796309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 275
Target Start/End: Original strand, 9800016 - 9800083
Alignment:
Q  206 acacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatt 275  Q
    |||||||||| ||||||||||| |||||| || |||||||||||| ||||||||||||||| ||||||||    
T  9800016 acacgacacgtacactgacacgccgacac-ct-ctaataatttgagaaaattacataattccgtgtaatt 9800083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 10954932 - 10954994
Alignment:
Q  210 gacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaat 274  Q
    |||||||||||||||||| |||||||   |||||||||||| ||||| |||||||||||||||||    
T  10954932 gacacgaacactgacacgccgacacaa--ctaataatttgaaaaaatcacataattcagtgtaat 10954994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 280
Target Start/End: Original strand, 7928451 - 7928498
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||| ||||||||||||| ||||| |||||||||||||||||||||||    
T  7928451 acaccgctaataatttgaaaaaatcacataattcagtgtaattatatg 7928498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 280
Target Start/End: Complemental strand, 8039893 - 8039846
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||| ||||||||||||| ||||||| |||||||||||||||||||||    
T  8039893 acaccgctaataatttgagaaaattatataattcagtgtaattatatg 8039846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 280
Target Start/End: Original strand, 9624642 - 9624689
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||||||||||||||||| ||||| |||||||||| ||||||||||||    
T  9624642 acactgctaataatttgagaaaatcacataattcaatgtaattatatg 9624689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 280
Target Start/End: Complemental strand, 11313858 - 11313811
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||||||||||||||||| ||||| |||||||| ||||||||||||||    
T  11313858 acactgctaataatttgagaaaatcacataatttagtgtaattatatg 11313811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 276
Target Start/End: Complemental strand, 35994839 - 35994753
Alignment:
Q  187 atacggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    ||||||||| | |||||| |||||||| | ||| ||||| | |||||||  ||||||||||||| ||||| |||||||||||||||||||    
T  35994839 atacggacatggacaccggacacgacatggacaatgacaagccgacaca--gctaataatttga-aaaatcacataattcagtgtaatta 35994753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 206 - 278
Target Start/End: Complemental strand, 30994965 - 30994895
Alignment:
Q  206 acacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattata 278  Q
    ||||||||| |||| ||||||||   ||||||||||||||||| | ||||| ||| |||||||||||||||||    
T  30994965 acacgacacaaacattgacacgtt--cacactgctaataatttaagaaaatcacacaattcagtgtaattata 30994895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 277
Target Start/End: Original strand, 11251983 - 11252023
Alignment:
Q  237 tgctaataatttgataaaattacataattcagtgtaattat 277  Q
    |||||||||||||| ||||| ||||||||||||||||||||    
T  11251983 tgctaataatttgagaaaatcacataattcagtgtaattat 11252023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 280
Target Start/End: Complemental strand, 11493441 - 11493372
Alignment:
Q  209 cgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    ||||||| ||| ||||||||||||||    |||||||| ||| ||||| |||||||||||||||||||||||    
T  11493441 cgacacggacattgacacgtcgacacca--ctaataatgtgagaaaatcacataattcagtgtaattatatg 11493372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 280
Target Start/End: Complemental strand, 16192801 - 16192761
Alignment:
Q  240 taataatttgataaaattacataattcagtgtaattatatg 280  Q
    ||||||||||| ||||| |||||||||||||||||||||||    
T  16192801 taataatttgagaaaataacataattcagtgtaattatatg 16192761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 276
Target Start/End: Original strand, 21479105 - 21479162
Alignment:
Q  217 acactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    ||||||||||| |||||||  ||||||||||||| ||||| ||| |||||||||||||||    
T  21479105 acactgacacgccgacaca--gctaataatttgaaaaaatcacacaattcagtgtaatta 21479162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 25948940 - 25948900
Alignment:
Q  238 gctaataatttgataaaattacataattcagtgtaattata 278  Q
    ||||||||||||| ||||| |||||||||||||||||||||    
T  25948940 gctaataatttgaaaaaatcacataattcagtgtaattata 25948900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 277
Target Start/End: Complemental strand, 27277896 - 27277852
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattat 277  Q
    |||||||||||||||||| ||||| |||||||| |||||||||||    
T  27277896 acactgctaataatttgagaaaatcacataatttagtgtaattat 27277852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 187 - 273
Target Start/End: Complemental strand, 10335388 - 10335304
Alignment:
Q  187 atacggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaa 273  Q
    ||||| ||||| |||||| |||||||||| ||||||||||| |||||||   |||||||||||| ||| | ||||| || |||||||    
T  10335388 atacgaacacggacaccggacacgacacggacactgacacgccgacaca--actaataatttgaaaaagtcacatattttagtgtaa 10335304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 206 - 276
Target Start/End: Original strand, 14216868 - 14216936
Alignment:
Q  206 acacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||||||||| |||||||||||||||||||   |||||||||| | || || | |||||||||||||||||    
T  14216868 acacgacacggacactgacacgtcgacaca--actaataattttaaaatatcatataattcagtgtaatta 14216936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 206 - 276
Target Start/End: Original strand, 14222997 - 14223065
Alignment:
Q  206 acacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||||||||| |||||||||||||||||||   |||||||||| | || || | |||||||||||||||||    
T  14222997 acacgacacggacactgacacgtcgacaca--actaataattttaaaatatcatataattcagtgtaatta 14223065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 239 - 278
Target Start/End: Complemental strand, 17005671 - 17005632
Alignment:
Q  239 ctaataatttgataaaattacataattcagtgtaattata 278  Q
    |||||||||||||||||| | |||||||||||||||||||    
T  17005671 ctaataatttgataaaatcatataattcagtgtaattata 17005632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 206 - 276
Target Start/End: Complemental strand, 26492288 - 26492220
Alignment:
Q  206 acacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||||||||| ||||||||||| ||||| |  ||||||||||||| ||||| | | |||||||||||||||    
T  26492288 acacgacacggacactgacacgccgacaga--gctaataatttgaaaaaatcatacaattcagtgtaatta 26492220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 276
Target Start/End: Original strand, 26508111 - 26508154
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||| ||||||||||||| ||||| |||||||||||||||||||    
T  26508111 acacagctaataatttgaaaaaatcacataattcagtgtaatta 26508154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 276
Target Start/End: Complemental strand, 8587111 - 8587036
Alignment:
Q  199 acaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||||| ||| |||||| ||||||||||| |||||||   ||| |||||||| ||||| |||||||| ||||||||||    
T  8587111 acaccggacatgacacggacactgacacgccgacaca--tctagtaatttgaaaaaatcacataattaagtgtaatta 8587036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 276
Target Start/End: Complemental strand, 10268588 - 10268501
Alignment:
Q  187 atacggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    ||||| ||||| ||| |||  |||||| | ||||||||||| ||||||| |  ||||||||||| ||||| |||||||| ||||||||||    
T  10268588 atacgaacacggacatcgattacgacatggacactgacacgccgacacagt--taataatttgaaaaaatcacataatttagtgtaatta 10268501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 279
Target Start/End: Complemental strand, 10690320 - 10690274
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattatat 279  Q
    |||| ||||||||| ||| ||||| ||||||||||||||||||||||    
T  10690320 acaccgctaataatctgagaaaatcacataattcagtgtaattatat 10690274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 238 - 280
Target Start/End: Original strand, 11665950 - 11665992
Alignment:
Q  238 gctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    ||||||||||||||||||| ||| |||| ||||||||||||||    
T  11665950 gctaataatttgataaaatcacacaatttagtgtaattatatg 11665992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 275
Target Start/End: Original strand, 14979182 - 14979224
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaatt 275  Q
    |||| ||||||||||||| ||||| ||||||||||||||||||    
T  14979182 acacagctaataatttgaaaaaatcacataattcagtgtaatt 14979224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 280
Target Start/End: Original strand, 25093471 - 25093550
Alignment:
Q  199 acaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||||| |||||||||  ||||| ||||| ||||||  || |||| |||||| ||||| ||| |||||||||||||||||||    
T  25093471 acaccggacacgacactgacactaacacgccgacac--tgttaatgatttgagaaaatcacacaattcagtgtaattatatg 25093550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 240 - 274
Target Start/End: Original strand, 33006831 - 33006865
Alignment:
Q  240 taataatttgataaaattacataattcagtgtaat 274  Q
    |||||||||||||||||||||||||||||| ||||    
T  33006831 taataatttgataaaattacataattcagtttaat 33006865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 238 - 280
Target Start/End: Complemental strand, 49505207 - 49505165
Alignment:
Q  238 gctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    ||||||||||||| ||||| |||||||| ||||||||||||||    
T  49505207 gctaataatttgagaaaatcacataatttagtgtaattatatg 49505165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 276
Target Start/End: Original strand, 55401044 - 55401119
Alignment:
Q  199 acaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||||| | |||||||| ||||||| ||| |||||||   |||||||||||| ||||| |||||||| ||||||||||    
T  55401044 acaccggatacgacacggacactgatacgccgacacaa--ctaataatttgaaaaaatcacataatttagtgtaatta 55401119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 266
Target Start/End: Complemental strand, 750721 - 750643
Alignment:
Q  187 atacggacacgcacaccgaacacgacacgaacac-tgacacgtcgacacactgctaataatttgataaaattacataattc 266  Q
    ||||||||||| |||||| |||||||||| |||| ||||||| |||||||   |||||||||||| || || |||||||||    
T  750721 atacggacacggacaccggacacgacacggacacttgacacggcgacaca--actaataatttgaaaatatcacataattc 750643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 280
Target Start/End: Original strand, 12704014 - 12704055
Alignment:
Q  239 ctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||||||||||| ||||  |||||||||||||||||||||||    
T  12704014 ctaataatttgagaaaagcacataattcagtgtaattatatg 12704055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 277
Target Start/End: Original strand, 15544680 - 15544738
Alignment:
Q  217 acactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattat 277  Q
    |||||||||||| |||||   ||||||||||||||||||| ||||||||| || |||||||    
T  15544680 acactgacacgttgacacc--gctaataatttgataaaatcacataattctgtataattat 15544738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 280
Target Start/End: Original strand, 20691322 - 20691367
Alignment:
Q  235 actgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||| ||||||||||| ||||| ||||||||||||||||| |||||    
T  20691322 actgataataatttgagaaaatgacataattcagtgtaatcatatg 20691367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 277
Target Start/End: Original strand, 21211296 - 21211333
Alignment:
Q  240 taataatttgataaaattacataattcagtgtaattat 277  Q
    ||||||||||| ||||||||||| ||||||||||||||    
T  21211296 taataatttgagaaaattacatagttcagtgtaattat 21211333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 280
Target Start/End: Original strand, 29508451 - 29508492
Alignment:
Q  239 ctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||||||||||| ||||| | |||||||||||||||||||||    
T  29508451 ctaataatttgaaaaaatcatataattcagtgtaattatatg 29508492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 278
Target Start/End: Complemental strand, 34307838 - 34307793
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattata 278  Q
    |||| ||||||||||||| ||||| ||||| |||||||||||||||    
T  34307838 acaccgctaataatttgagaaaatcacatatttcagtgtaattata 34307793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 276
Target Start/End: Original strand, 34910324 - 34910361
Alignment:
Q  239 ctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||||||||||| ||||| |||||||||||||||||||    
T  34910324 ctaataatttgaaaaaatcacataattcagtgtaatta 34910361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 277
Target Start/End: Original strand, 3618882 - 3618926
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattat 277  Q
    |||| ||||||||||||| |||||| |||||||||| ||||||||    
T  3618882 acaccgctaataatttgagaaaattccataattcagcgtaattat 3618926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 276
Target Start/End: Original strand, 20503452 - 20503509
Alignment:
Q  217 acactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    ||||||||||| |||||||   | |||||||||| ||||| |||||||||||||||||||    
T  20503452 acactgacacgccgacacaa--caaataatttgaaaaaatgacataattcagtgtaatta 20503509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 280
Target Start/End: Complemental strand, 32804591 - 32804551
Alignment:
Q  240 taataatttgataaaattacataattcagtgtaattatatg 280  Q
    ||||||||||| ||||| |||||||| ||||||||||||||    
T  32804591 taataatttgagaaaatcacataatttagtgtaattatatg 32804551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 273
Target Start/End: Complemental strand, 51206411 - 51206371
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaa 273  Q
    |||| ||||||||||||| ||||| ||||||||||||||||    
T  51206411 acacagctaataatttgaaaaaatcacataattcagtgtaa 51206371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 1e-16; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 189 - 276
Target Start/End: Original strand, 27945000 - 27945085
Alignment:
Q  189 acggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    ||||| ||| |||||| |||||||||| ||||||||||| ||||||    |||||||||||| |||||||||||||||||||||||||    
T  27945000 acggatacggacaccggacacgacacggacactgacacgccgacacca--ctaataatttgagaaaattacataattcagtgtaatta 27945085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 276
Target Start/End: Original strand, 24339599 - 24339686
Alignment:
Q  187 atacggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    ||||||| ||| |||||| |||||||| | ||| ||||||| |||||||  ||||||||||||| ||||| |||||||||||||||||||    
T  24339599 atacggatacggacaccggacacgacatggacattgacacgccgacaca--gctaataatttgaaaaaatcacataattcagtgtaatta 24339686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 189 - 280
Target Start/End: Complemental strand, 7328791 - 7328702
Alignment:
Q  189 acggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    ||||| ||| ||||||||||||||||  ||| | ||||||||| ||  |||||||||||||| ||||| |||||||| ||||||||||||||    
T  7328791 acggatacggacaccgaacacgacacagacattaacacgtcgatac--tgctaataatttgagaaaataacataatttagtgtaattatatg 7328702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 206 - 276
Target Start/End: Original strand, 13770667 - 13770735
Alignment:
Q  206 acacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||||||||| ||||||| ||| |||||||  ||||||||||| | |||||||||||||||||||||||||    
T  13770667 acacgacacggacactgatacgccgacaca--gctaataatttaaaaaaattacataattcagtgtaatta 13770735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 206 - 276
Target Start/End: Original strand, 24105654 - 24105722
Alignment:
Q  206 acacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||||||||| ||||||||||| |||||||  ||||||||||||| |||||| ||| ||||||||||||||    
T  24105654 acacgacacggacactgacacgccgacaca--gctaataatttgaaaaaattgcatgattcagtgtaatta 24105722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 206 - 276
Target Start/End: Original strand, 26733280 - 26733348
Alignment:
Q  206 acacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||||||||| ||||||||||||||||||   ||||||||||||| ||||| |||||||||||| ||||||    
T  26733280 acacgacacggacactgacacgtcgacacc--gctaataatttgacaaaatcacataattcagtctaatta 26733348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 280
Target Start/End: Original strand, 3721067 - 3721141
Alignment:
Q  203 cgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    ||||||||||||| |||||||||  ||||||   |||||||||||||| ||||| |||||||| ||| ||||||||||    
T  3721067 cgaacacgacacggacactgacatttcgaca---tgctaataatttgagaaaatcacataatttagtataattatatg 3721141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 280
Target Start/End: Complemental strand, 18013132 - 18013085
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    ||||| |||||||||| | |||||||||||||||||||||||||||||    
T  18013132 acactactaataatttaaaaaaattacataattcagtgtaattatatg 18013085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 237 - 276
Target Start/End: Original strand, 30813817 - 30813856
Alignment:
Q  237 tgctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  30813817 tgctaataatttgagaaaattacataattcagtgtaatta 30813856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 280
Target Start/End: Original strand, 1433411 - 1433502
Alignment:
Q  187 atacggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||||| |||| ||||||||||||||||| ||| ||||||| ||  |||| | ||||||||||| ||||| |||| |||  |||||||||||||    
T  1433411 atacgggcacggacaccgaacacgacacggacattgacacgccg--acaccgttaataatttgagaaaatcacatcatttggtgtaattatatg 1433502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 279
Target Start/End: Original strand, 5235962 - 5236033
Alignment:
Q  206 acacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattatat 279  Q
    |||||||||  ||||||||||||||||||   ||||||||||| | ||||||| |||||| |||||||||||||    
T  5235962 acacgacacagacactgacacgtcgacacc--gctaataatttaagaaaattatataatttagtgtaattatat 5236033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 276
Target Start/End: Complemental strand, 11061178 - 11061091
Alignment:
Q  187 atacggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    ||||||||||| ||| || | |||||||| ||||||||||  |||||||  ||||||||||||| ||||| |||||||| ||| ||||||    
T  11061178 atacggacacggacatcggatacgacacggacactgacacaccgacaca--gctaataatttgaaaaaatcacataatttagtataatta 11061091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 276
Target Start/End: Original strand, 21880158 - 21880196
Alignment:
Q  238 gctaataatttgataaaattacataattcagtgtaatta 276  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  21880158 gctaataatttgagaaaattacataattcagtgtaatta 21880196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 276
Target Start/End: Original strand, 25481859 - 25481946
Alignment:
Q  187 atacggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||| |||||| ||| || |||| ||| | ||| ||||||| |||||||  ||||||||||||| ||||| |||||||||||||||||||    
T  25481859 atacagacacggacatcggacacaacatggacaatgacacgccgacaca--gctaataatttgaaaaaatcacataattcagtgtaatta 25481946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 278
Target Start/End: Original strand, 43249957 - 43250039
Alignment:
Q  194 cacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattata 278  Q
    |||| |||||| ||| |||||| ||||||||||| ||||||   | ||||||||||| ||||| ||||||| |||||||||||||    
T  43249957 cacggacaccggacaagacacggacactgacacgccgacacg--gataataatttgagaaaatgacataatacagtgtaattata 43250039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 280
Target Start/End: Original strand, 15902830 - 15902870
Alignment:
Q  240 taataatttgataaaattacataattcagtgtaattatatg 280  Q
    ||||||||||||||||| |||||||| ||||||||||||||    
T  15902830 taataatttgataaaatcacataatttagtgtaattatatg 15902870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 278
Target Start/End: Complemental strand, 21141084 - 21140995
Alignment:
Q  187 atacggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattata 278  Q
    ||||||||||| |||||| |||||||||| || | |||||||||  ||||  |||||||||| | ||||| | |||||||||||| ||||||    
T  21141084 atacggacacggacaccgtacacgacacggacgccgacacgtcg--acaccactaataatttaagaaaatcatataattcagtgtgattata 21140995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 280
Target Start/End: Complemental strand, 27732290 - 27732250
Alignment:
Q  240 taataatttgataaaattacataattcagtgtaattatatg 280  Q
    ||||||||| | |||||||||||||||||||||||||||||    
T  27732290 taataatttaagaaaattacataattcagtgtaattatatg 27732250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 277
Target Start/End: Complemental strand, 29787427 - 29787383
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattat 277  Q
    |||| ||||||||||||| ||||| ||||||||||||||||||||    
T  29787427 acaccgctaataatttgagaaaatcacataattcagtgtaattat 29787383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 280
Target Start/End: Original strand, 32308107 - 32308168
Alignment:
Q  217 acactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    ||||||||||| ||||||   ||||||||||||| ||||| |||||||||||||||||| ||||    
T  32308107 acactgacacgccgacacc--gctaataatttgagaaaatcacataattcagtgtaattgtatg 32308168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 273
Target Start/End: Complemental strand, 43027552 - 43027487
Alignment:
Q  206 acacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaa 273  Q
    |||||||||| ||||||||||| |||| ||  ||||||||||||| ||||| ||||||| ||||||||    
T  43027552 acacgacacggacactgacacggcgaccca--gctaataatttgaaaaaatcacataatgcagtgtaa 43027487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 238 - 277
Target Start/End: Original strand, 2424620 - 2424659
Alignment:
Q  238 gctaataatttgataaaattacataattcagtgtaattat 277  Q
    ||||||||||||| ||||| ||||||||||||||||||||    
T  2424620 gctaataatttgagaaaatcacataattcagtgtaattat 2424659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 280
Target Start/End: Original strand, 8160417 - 8160464
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||| ||||||||||| | |||||||||||||| ||||||||||||||    
T  8160417 acaccgctaataatttaagaaaattacataatttagtgtaattatatg 8160464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 280
Target Start/End: Original strand, 12278836 - 12278883
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||||| ||||||||| | ||||| |||||||||||||||||||||||    
T  12278836 acactgataataatttaagaaaatgacataattcagtgtaattatatg 12278883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 234 - 277
Target Start/End: Original strand, 12289116 - 12289159
Alignment:
Q  234 cactgctaataatttgataaaattacataattcagtgtaattat 277  Q
    ||||||||||||||||| ||||| ||||||||||||| ||||||    
T  12289116 cactgctaataatttgagaaaatcacataattcagtggaattat 12289159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 241 - 276
Target Start/End: Complemental strand, 12843225 - 12843190
Alignment:
Q  241 aataatttgataaaattacataattcagtgtaatta 276  Q
    ||||||||||||||||||||||||||| ||||||||    
T  12843225 aataatttgataaaattacataattcaatgtaatta 12843190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 280
Target Start/End: Original strand, 16341497 - 16341544
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||||| ||||||||||| ||||| |||||||| ||||||||||||||    
T  16341497 acactgataataatttgagaaaatcacataattaagtgtaattatatg 16341544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 241 - 280
Target Start/End: Complemental strand, 19930991 - 19930952
Alignment:
Q  241 aataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||||||||||||||| |||||||||| ||||||||||||    
T  19930991 aataatttgataaaatgacataattcaatgtaattatatg 19930952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 280
Target Start/End: Original strand, 20549792 - 20549839
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||| ||||||||||||| ||||| || ||||||||||||||||||||    
T  20549792 acaccgctaataatttgagaaaatcacgtaattcagtgtaattatatg 20549839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 276
Target Start/End: Original strand, 28155571 - 28155614
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||| ||||||||||||| ||||||||||||||| |||||||||    
T  28155571 acaccgctaataatttgagaaaattacataattcggtgtaatta 28155614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 240 - 278
Target Start/End: Original strand, 5938480 - 5938518
Alignment:
Q  240 taataatttgataaaattacataattcagtgtaattata 278  Q
    ||||||||||||||||| |||||||||||| ||||||||    
T  5938480 taataatttgataaaataacataattcagtataattata 5938518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 238 - 280
Target Start/End: Original strand, 17851437 - 17851479
Alignment:
Q  238 gctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    ||||||||||| | ||||| |||||||||||||||||||||||    
T  17851437 gctaataattttagaaaatcacataattcagtgtaattatatg 17851479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 280
Target Start/End: Complemental strand, 22602812 - 22602721
Alignment:
Q  187 atacggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||||||||||  |||| ||||||||||   |||||||||| ||||||  |   ||| |||||| ||||| |||||||||||||||||||||||    
T  22602812 atacggacacgggcacctaacacgacacaggcactgacacgccgacaccgta--aattatttgagaaaatcacataattcagtgtaattatatg 22602721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 238 - 276
Target Start/End: Complemental strand, 26033514 - 26033476
Alignment:
Q  238 gctaataatttgataaaattacataattcagtgtaatta 276  Q
    ||||||||||||| ||||| |||||||||||||||||||    
T  26033514 gctaataatttgaaaaaatcacataattcagtgtaatta 26033476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 280
Target Start/End: Original strand, 5835254 - 5835295
Alignment:
Q  239 ctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||||| ||||| ||||| |||||||||||||||||||||||    
T  5835254 ctaatagtttgagaaaataacataattcagtgtaattatatg 5835295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 280
Target Start/End: Original strand, 17307904 - 17307941
Alignment:
Q  243 taatttgataaaattacataattcagtgtaattatatg 280  Q
    |||||||| ||||| |||||||||||||||||||||||    
T  17307904 taatttgagaaaataacataattcagtgtaattatatg 17307941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 278
Target Start/End: Original strand, 19992002 - 19992047
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattata 278  Q
    |||| ||||||||||||| ||||| ||||| |||||||||||||||    
T  19992002 acacagctaataatttgagaaaatcacatatttcagtgtaattata 19992047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 280
Target Start/End: Original strand, 22868049 - 22868090
Alignment:
Q  239 ctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||||||| ||| ||||| |||||||||||||||||||||||    
T  22868049 ctaataatatgagaaaatcacataattcagtgtaattatatg 22868090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 275
Target Start/End: Original strand, 30730994 - 30731080
Alignment:
Q  187 atacggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatt 275  Q
    ||||||||||| |||||  |||||||||  ||| || |||| ||||||   || |||||||||| ||||| ||||||||||||||||||    
T  30730994 atacggacacggacaccagacacgacacatacagtggcacgccgacacc--gcgaataatttgagaaaatcacataattcagtgtaatt 30731080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 280
Target Start/End: Original strand, 41020482 - 41020544
Alignment:
Q  216 aacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    ||||||||||||||||||||   ||||||||||   ||||| |||||||| ||||||||||||||    
T  41020482 aacactgacacgtcgacacaa--ctaataatttacaaaaatcacataatttagtgtaattatatg 41020544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 1401031 - 1401071
Alignment:
Q  238 gctaataatttgataaaattacataattcagtgtaattata 278  Q
    ||||||||||||| ||| | |||||||||||||||||||||    
T  1401031 gctaataatttgagaaactcacataattcagtgtaattata 1401071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 280
Target Start/End: Complemental strand, 4008615 - 4008575
Alignment:
Q  240 taataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||||||||||||||||||||| ||||| ||||||| ||||    
T  4008615 taataatttgataaaattacatgattcaatgtaattgtatg 4008575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 280
Target Start/End: Complemental strand, 4014007 - 4013967
Alignment:
Q  240 taataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||||||||||||||||||||| ||||| ||||||| ||||    
T  4014007 taataatttgataaaattacatgattcaatgtaattgtatg 4013967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 280
Target Start/End: Original strand, 4909159 - 4909199
Alignment:
Q  240 taataatttgataaaattacataattcagtgtaattatatg 280  Q
    ||||||||||| |||||||||||||||| |||||| |||||    
T  4909159 taataatttgagaaaattacataattcattgtaatcatatg 4909199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 268
Target Start/End: Complemental strand, 11722186 - 11722121
Alignment:
Q  201 accgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcag 268  Q
    |||| |||||||||| ||||||||||| ||  |||| ||||| ||||||| ||||| |||||||||||    
T  11722186 accggacacgacacggacactgacacgccg--acaccgctaacaatttgagaaaatcacataattcag 11722121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 278
Target Start/End: Complemental strand, 18233659 - 18233611
Alignment:
Q  230 gacacactgctaataatttgataaaattacataattcagtgtaattata 278  Q
    ||||||| | || |||||||| ||||| |||||||||||||||||||||    
T  18233659 gacacacagatagtaatttgagaaaatgacataattcagtgtaattata 18233611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 280
Target Start/End: Original strand, 22484012 - 22484073
Alignment:
Q  217 acactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    ||||||||||| ||||||   ||||||||||| | |||||| ||||||||||| ||||||||||    
T  22484012 acactgacacgccgacacc--gctaataattttagaaaattgcataattcagtataattatatg 22484073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 280
Target Start/End: Complemental strand, 42720962 - 42720901
Alignment:
Q  217 acactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||||||||||| |||||   ||||||||||||| ||||| |||||||| | ||||||||||||    
T  42720962 acactgacacgttgacacc--gctaataatttgaaaaaatcacataattaaatgtaattatatg 42720901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 1e-16; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 206 - 277
Target Start/End: Complemental strand, 21782901 - 21782832
Alignment:
Q  206 acacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattat 277  Q
    ||||||||| |||||||||||| ||||||  |||||||||||||| ||||| ||||||||||||||||||||    
T  21782901 acacgacacaaacactgacacgccgacac--tgctaataatttgagaaaatcacataattcagtgtaattat 21782832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 189 - 276
Target Start/End: Complemental strand, 20539774 - 20539689
Alignment:
Q  189 acggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    ||||| ||| |||| | |||||||||| |||||||||||||||||||  ||||||||||||| ||||| | |||||| ||||||||||    
T  20539774 acggatacggacactggacacgacacggacactgacacgtcgacaca--gctaataatttgaaaaaatcatataatttagtgtaatta 20539689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 277
Target Start/End: Original strand, 28412306 - 28412395
Alignment:
Q  186 aatacggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattat 277  Q
    |||| ||||||| |||||  |||||||||| ||||| ||||||| ||||  |  ||||||||||||||||| ||||||||||||||||||||    
T  28412306 aatatggacacggacaccagacacgacacggacactaacacgtcaacaccgt--taataatttgataaaatcacataattcagtgtaattat 28412395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 187 - 278
Target Start/End: Complemental strand, 36756446 - 36756357
Alignment:
Q  187 atacggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattata 278  Q
    ||||||||||| ||| || | |||||||  |||||||||||||||||||   ||||||||||||  |||| |||||||||||||||||||||    
T  36756446 atacggacacgaacatcggatacgacacagacactgacacgtcgacacaa--ctaataatttgaagaaataacataattcagtgtaattata 36756357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 210 - 276
Target Start/End: Complemental strand, 21374778 - 21374714
Alignment:
Q  210 gacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||||| ||||| ||||| |||||||  ||||||||||||| |||||||||||||||||||||||||    
T  21374778 gacacggacactaacacgccgacaca--gctaataatttgaaaaaattacataattcagtgtaatta 21374714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 206 - 280
Target Start/End: Original strand, 21616738 - 21616810
Alignment:
Q  206 acacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||||||||| |||| |||||| ||||||   ||||||||||||| ||||| |||||||||||||||||||||||    
T  21616738 acacgacacggacacggacacgccgacacc--gctaataatttgagaaaatcacataattcagtgtaattatatg 21616810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 210 - 276
Target Start/End: Original strand, 39323244 - 39323308
Alignment:
Q  210 gacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||||| ||||||| ||||||||||   ||||||||||||| |||||||||||||||||||||||||    
T  39323244 gacacggacactgaaacgtcgacacc--gctaataatttgacaaaattacataattcagtgtaatta 39323308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 276
Target Start/End: Original strand, 15972851 - 15972917
Alignment:
Q  208 acgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||||||| ||||||||||| ||||||| |  ||||||||||| ||||||||| |||||||||||||||    
T  15972851 acgacacggacactgacacgccgacacaat--taataatttgaaaaaattacacaattcagtgtaatta 15972917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 181 - 276
Target Start/End: Original strand, 6940206 - 6940299
Alignment:
Q  181 tatgaaatacggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    ||||||| ||||| ||| ||| | || |||||||| ||||||||||| |||||||  ||||||||||| | ||| |||||||||| ||||||||||    
T  6940206 tatgaaacacggatacggacatcaaatacgacacggacactgacacgccgacaca--gctaataattttaaaaagttacataattaagtgtaatta 6940299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 190 - 276
Target Start/End: Original strand, 21624226 - 21624311
Alignment:
Q  190 cggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaatta-cataattcagtgtaatta 276  Q
    |||| ||| ||||||||||||||||  ||||||||||| |||||||  ||||||||||| | |||| || ||||||||||||||||||    
T  21624226 cggatacggacaccgaacacgacacagacactgacacgccgacaca--gctaataattttaaaaaaatagcataattcagtgtaatta 21624311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 206 - 276
Target Start/End: Complemental strand, 12941018 - 12940950
Alignment:
Q  206 acacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||||||||| |||||||||||| ||||||   |||||||||||| ||||| | |||||||||||||||||    
T  12941018 acacgacacggacactgacacgttgacacaa--ctaataatttgaaaaaatcatataattcagtgtaatta 12940950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 280
Target Start/End: Original strand, 28677910 - 28677957
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||| ||||||||||||| ||||| |||||||||||||||||||||||    
T  28677910 acaccgctaataatttgaaaaaatcacataattcagtgtaattatatg 28677957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 277
Target Start/End: Original strand, 31284005 - 31284093
Alignment:
Q  187 atacggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattat 277  Q
    ||||||||||| |||||| |||  ||||| ||||| ||||| ||||||  |||||||||||||| ||||| ||||||| || |||||||||    
T  31284005 atacggacacggacaccggacataacacgtacacttacacgccgacac--tgctaataatttgagaaaatcacataatccattgtaattat 31284093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 278
Target Start/End: Original strand, 23921261 - 23921299
Alignment:
Q  240 taataatttgataaaattacataattcagtgtaattata 278  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  23921261 taataatttgagaaaattacataattcagtgtaattata 23921299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 280
Target Start/End: Complemental strand, 34691858 - 34691816
Alignment:
Q  238 gctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    ||||||||||||||||||| | |||||||||||||||||||||    
T  34691858 gctaataatttgataaaatcatataattcagtgtaattatatg 34691816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 280
Target Start/End: Complemental strand, 34714270 - 34714228
Alignment:
Q  238 gctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    ||||||||||||||||||| | |||||||||||||||||||||    
T  34714270 gctaataatttgataaaatcatataattcagtgtaattatatg 34714228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 280
Target Start/End: Original strand, 35449486 - 35449561
Alignment:
Q  203 cgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||||||||||| |||||||||| | |   |||||| ||||||||||| ||||| ||| |||||||||||||||||||    
T  35449486 cgaacacgacacaaacactgacaagcc--aacactgttaataatttgagaaaatcacagaattcagtgtaattatatg 35449561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 233 - 278
Target Start/End: Complemental strand, 42832334 - 42832289
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattata 278  Q
    |||| ||||||||||||| ||||||||||| |||||||||||||||    
T  42832334 acaccgctaataatttgagaaaattacatatttcagtgtaattata 42832289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 280
Target Start/End: Complemental strand, 15909704 - 15909643
Alignment:
Q  217 acactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    ||||||||||| ||| |||  ||||| | ||||| |||||||||||||||||||||||||||||    
T  15909704 acactgacacgccgataca--gctaaaattttgagaaaattacataattcagtgtaattatatg 15909643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 278
Target Start/End: Complemental strand, 18420532 - 18420447
Alignment:
Q  191 ggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattata 278  Q
    ||||||| ||||||||||||| ||  | ||||||||| | ||||  |||||||||||||| ||||| |||||||||| || |||||||    
T  18420532 ggacacggacaccgaacacgagacatatactgacacgccaacac--tgctaataatttgagaaaatcacataattcaatgcaattata 18420447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 239 - 278
Target Start/End: Complemental strand, 12668475 - 12668436
Alignment:
Q  239 ctaataatttgataaaattacataattcagtgtaattata 278  Q
    |||||||||||| ||||| |||||||||||||||||||||    
T  12668475 ctaataatttgaaaaaatgacataattcagtgtaattata 12668436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 239 - 278
Target Start/End: Original strand, 18622613 - 18622652
Alignment:
Q  239 ctaataatttgataaaattacataattcagtgtaattata 278  Q
    |||||||||| ||||||| |||||||||||||||||||||    
T  18622613 ctaataatttaataaaatcacataattcagtgtaattata 18622652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 206 - 276
Target Start/End: Complemental strand, 18841096 - 18841028
Alignment:
Q  206 acacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||||||| | |||||||||||  ||||||   |||||||||||| |||||||||||||| ||||||||||    
T  18841096 acacgacatggacactgacacgctgacacaa--ctaataatttgaaaaaattacataattaagtgtaatta 18841028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 199 - 276
Target Start/End: Complemental strand, 19536488 - 19536412
Alignment:
Q  199 acaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaatt-acataattcagtgtaatta 276  Q
    |||||| |||||||||| ||| ||||||| |||||||   |||||||||||| |||| | |||||||||||||||||||    
T  19536488 acaccggacacgacacggacaatgacacgccgacacaa--ctaataatttgaaaaaaatcacataattcagtgtaatta 19536412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 280
Target Start/End: Original strand, 23718027 - 23718074
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||| ||||||||||||| ||| | |||||||||||||||||||||||    
T  23718027 acaccgctaataatttgagaaagtcacataattcagtgtaattatatg 23718074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 280
Target Start/End: Original strand, 24105699 - 24105746
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||| ||||||||||||| ||| | |||||||||||||||||||||||    
T  24105699 acaccgctaataatttgagaaagtcacataattcagtgtaattatatg 24105746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 276
Target Start/End: Complemental strand, 30404929 - 30404865
Alignment:
Q  210 gacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||||| ||||||||||| ||||||  |  ||||||||||| ||||| |||||||||||||||||||    
T  30404929 gacacggacactgacacgccgacacggt--taataatttgaaaaaatcacataattcagtgtaatta 30404865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 280
Target Start/End: Original strand, 31808078 - 31808125
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||| ||||||||||| | ||||| |||||||||||||||||||||||    
T  31808078 acaccgctaataatttaacaaaatcacataattcagtgtaattatatg 31808125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 280
Target Start/End: Complemental strand, 37411302 - 37411255
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||| ||||||||||||| ||||| |||||||||||||| ||||||||    
T  37411302 acaccgctaataatttgagaaaatcacataattcagtgtgattatatg 37411255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 276
Target Start/End: Original strand, 37558957 - 37559021
Alignment:
Q  210 gacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||||| ||||||||||| |||||||  ||||||||||||  ||||| |||||||||| ||||||||    
T  37558957 gacacggacactgacacgccgacaca--gctaataatttgtaaaaatcacataattcaatgtaatta 37559021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 240 - 279
Target Start/End: Complemental strand, 40361805 - 40361766
Alignment:
Q  240 taataatttgataaaattacataattcagtgtaattatat 279  Q
    ||||||||||| |||||||||||||| |||||||||||||    
T  40361805 taataatttgaaaaaattacataatttagtgtaattatat 40361766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 280
Target Start/End: Original strand, 44860321 - 44860368
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||| ||||||||||||| |||||  ||||||||||||||||||||||    
T  44860321 acaccgctaataatttgagaaaatcgcataattcagtgtaattatatg 44860368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 276
Target Start/End: Original strand, 24894370 - 24894433
Alignment:
Q  211 acacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    ||||| ||||||||||| |||||||  ||||||||||| | ||||| ||||||||||||| |||||    
T  24894370 acacggacactgacacgccgacaca--gctaataatttaaaaaaatcacataattcagtgcaatta 24894433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 206 - 278
Target Start/End: Original strand, 29663985 - 29664056
Alignment:
Q  206 acacgacacgaacactgacacgtcgacacactgctaataatttgataaaat-tacataattcagtgtaattata 278  Q
    |||||||||  ||||||||| |||||||   |||||||||||||| ||||| || |||||||||||||||||||    
T  29663985 acacgacacagacactgacatgtcgacag--tgctaataatttgaaaaaatatatataattcagtgtaattata 29664056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 238 - 276
Target Start/End: Complemental strand, 30717583 - 30717545
Alignment:
Q  238 gctaataatttgataaaattacataattcagtgtaatta 276  Q
    ||||||||||||| ||||| |||||||||||||||||||    
T  30717583 gctaataatttgaaaaaatcacataattcagtgtaatta 30717545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 280
Target Start/End: Original strand, 5367199 - 5367240
Alignment:
Q  239 ctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    ||||||||||||  |||| |||||||||||||||||||||||    
T  5367199 ctaataatttgaggaaatcacataattcagtgtaattatatg 5367240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 276
Target Start/End: Original strand, 15657834 - 15657908
Alignment:
Q  200 caccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    ||||| |||||||||| ||||| ||||| |||| ||   |||||||||||  ||||| |||||||||||||||||||    
T  15657834 caccggacacgacacggacactaacacgccgactcaa--ctaataatttgtaaaaatcacataattcagtgtaatta 15657908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 276
Target Start/End: Original strand, 18421941 - 18422007
Alignment:
Q  208 acgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||||||| ||||||||||| ||||||| |  ||||||||| | || || |||||||||||||||||||    
T  18421941 acgacacggacactgacacgccgacacaat--taataatttaaaaatatcacataattcagtgtaatta 18422007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 274
Target Start/End: Complemental strand, 30298530 - 30298464
Alignment:
Q  206 acacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaat 274  Q
    |||||| |||||| | |||||||||||||   | ||||||||| ||||||| |||||||||||||||||    
T  30298530 acacgatacgaacgccgacacgtcgacacc--gataataatttaataaaatgacataattcagtgtaat 30298464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 277
Target Start/End: Original strand, 18276522 - 18276566
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattat 277  Q
    |||| ||||||||||||| ||||| || |||||||||||||||||    
T  18276522 acaccgctaataatttgagaaaatcacttaattcagtgtaattat 18276566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 25080906 - 25080946
Alignment:
Q  238 gctaataatttgataaaattacataattcagtgtaattata 278  Q
    |||||||||||||||| || |||||| ||||||||||||||    
T  25080906 gctaataatttgataagatcacataagtcagtgtaattata 25080946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 27286345 - 27286305
Alignment:
Q  238 gctaataatttgataaaattacataattcagtgtaattata 278  Q
    |||||||||||||||| || |||||||| ||||||||||||    
T  27286345 gctaataatttgataagatcacataattaagtgtaattata 27286305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 280
Target Start/End: Complemental strand, 30527654 - 30527606
Alignment:
Q  232 cacactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    ||||||| ||||||||||| ||||| | |||||| ||||||||||||||    
T  30527654 cacactgttaataatttgagaaaatcatataatttagtgtaattatatg 30527606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 280
Target Start/End: Complemental strand, 32199191 - 32199151
Alignment:
Q  240 taataatttgataaaattacataattcagtgtaattatatg 280  Q
    ||||||||||||||||| |||||||| ||| ||||||||||    
T  32199191 taataatttgataaaatcacataattaagtataattatatg 32199151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 276
Target Start/End: Complemental strand, 38117231 - 38117174
Alignment:
Q  217 acactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    ||||||||||| |||||||  ||||||||||||| ||||| ||||| ||| |||||||||    
T  38117231 acactgacacgccgacaca--gctaataatttgaaaaaatcacatacttcggtgtaatta 38117174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 199 - 276
Target Start/End: Original strand, 20141 - 20216
Alignment:
Q  199 acaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||||| |||||||||| ||| ||||||| |||||||  ||||||||||||| ||||| |||||||||||||||||||    
T  20141 acaccggacacgacacggacaatgacacgccgacaca--gctaataatttgaaaaaatcacataattcagtgtaatta 20216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 276
Target Start/End: Original strand, 8755 - 8842
Alignment:
Q  187 atacggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    ||||||||||| |||||| |||||||||| ||||||||||| |||||||  ||||||||||||| ||||| | || ||| ||||||||||    
T  8755 atacggacacggacaccggacacgacacggacactgacacgccgacaca--gctaataatttgaaaaaatcatattatttagtgtaatta 8842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 276
Target Start/End: Original strand, 46639 - 46726
Alignment:
Q  187 atacggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    ||||||||||| ||| || |||||||||| ||| ||||||| ||||||| |  ||||||||||| ||||| |||||||||||||||||||    
T  46639 atacggacacggacatcggacacgacacggacaatgacacgccgacacagt--taataatttgaaaaaatcacataattcagtgtaatta 46726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 276
Target Start/End: Complemental strand, 2572158 - 2572071
Alignment:
Q  187 atacggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    ||||||||||| |||| | |||||||||| | || |||||||||||||||  |||||||||||| ||||| |||||||| ||||||||||    
T  2572158 atacggacacggacactggacacgacacggataccgacacgtcgacacac--ctaataatttgaaaaaatcacataatttagtgtaatta 2572071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 276
Target Start/End: Original strand, 22651933 - 22652020
Alignment:
Q  187 atacggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    ||||||||||  |||||| |||||||||| ||||||||||| |||||||  ||||||||||||| ||||| |||||||||| | ||||||    
T  22651933 atacggacactgacaccggacacgacacggacactgacacgccgacaca--gctaataatttgaaaaaatcacataattcaatataatta 22652020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 280
Target Start/End: Original strand, 11803215 - 11803307
Alignment:
Q  186 aatacggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    ||||| |||||| ||||| ||||||||||||||||||| ||   |  |||||| ||||||||| | ||||| |||||||||||||||||||||||    
T  11803215 aatacagacacgaacaccaaacacgacacgaacactgatacactg--acactgttaataatttaagaaaatcacataattcagtgtaattatatg 11803307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 233 - 280
Target Start/End: Complemental strand, 11927144 - 11927097
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||    
T  11927144 acactgttaataatttgataaaatcacataattcagtgtaattatatg 11927097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 199 - 276
Target Start/End: Complemental strand, 29510394 - 29510319
Alignment:
Q  199 acaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||||| |||||||||| ||||||||||| |||||||  ||||||||||||| ||||| ||| |||||||| ||||||    
T  29510394 acaccggacacgacacggacactgacacgccgacaca--gctaataatttgaaaaaatcacaaaattcagtataatta 29510319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 199 - 280
Target Start/End: Original strand, 36934639 - 36934718
Alignment:
Q  199 acaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    ||||| ||||||||||| ||||| ||||||||||||   |||||||||| || ||||| |||||||||| ||||||||||||    
T  36934639 acaccaaacacgacacggacactaacacgtcgacacc--gctaataattcgaaaaaatcacataattcattgtaattatatg 36934718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 279
Target Start/End: Original strand, 13203617 - 13203688
Alignment:
Q  206 acacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattatat 279  Q
    ||||||||| |||||||| ||||| ||| ||  |||||||||||| ||||||||||||||||||||||||||||    
T  13203617 acacgacacaaacactgatacgtcaaca-aca-ctaataatttgagaaaattacataattcagtgtaattatat 13203688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 239 - 279
Target Start/End: Original strand, 7658470 - 7658510
Alignment:
Q  239 ctaataatttgataaaattacataattcagtgtaattatat 279  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  7658470 ctaataatttgagaaaattacataattcagtgtaattatat 7658510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 217 - 280
Target Start/End: Original strand, 34897072 - 34897133
Alignment:
Q  217 acactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||| |||||||||||||   ||||||||||||| ||||| |||||||||||||||||||||||    
T  34897072 acacagacacgtcgacacc--gctaataatttgagaaaatcacataattcagtgtaattatatg 34897133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 280
Target Start/End: Original strand, 4611535 - 4611582
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||| ||||||||||||| ||||| |||||||||||||||||||||||    
T  4611535 acaccgctaataatttgagaaaataacataattcagtgtaattatatg 4611582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 276
Target Start/End: Original strand, 7442846 - 7442889
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||| ||||||||||| |||||||||||||||||||||||||||    
T  7442846 acaccgctaataatttcataaaattacataattcagtgtaatta 7442889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 280
Target Start/End: Original strand, 11944666 - 11944713
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||||| ||||||||||||||||| |||||| ||||||||||||||||    
T  11944666 acactgttaataatttgataaaatcacataactcagtgtaattatatg 11944713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 280
Target Start/End: Complemental strand, 13844654 - 13844607
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||||||||||||||||| ||||| |||||||| ||||||||||||||    
T  13844654 acactgctaataatttgagaaaatcacataattgagtgtaattatatg 13844607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 280
Target Start/End: Original strand, 14731713 - 14731760
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||||||||||||||||| ||||| |||||||| ||||||||||||||    
T  14731713 acactgctaataatttgagaaaatcacataatttagtgtaattatatg 14731760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 280
Target Start/End: Complemental strand, 25172756 - 25172709
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||||||||||||||||||||||||||||| || | ||||||||||||    
T  25172756 acactgctaataatttgataaaattacatattttaatgtaattatatg 25172709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 280
Target Start/End: Complemental strand, 31236635 - 31236588
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||||||||||||||||| ||||| |||||||||| ||||||||||||    
T  31236635 acactgctaataatttgagaaaatcacataattcaatgtaattatatg 31236588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 276
Target Start/End: Complemental strand, 18170564 - 18170497
Alignment:
Q  207 cacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    ||||||||| ||||||||||| ||||||| |  ||| ||||||| |||||||||||||||| ||||||||    
T  18170564 cacgacacggacactgacacgccgacacaat--taaaaatttgaaaaaattacataattcaatgtaatta 18170497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 276
Target Start/End: Complemental strand, 18634132 - 18634065
Alignment:
Q  207 cacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    ||||||||| ||||||||||| ||||||| |  ||| ||||||| |||||||||||||||| ||||||||    
T  18634132 cacgacacggacactgacacgccgacacaat--taaaaatttgaaaaaattacataattcaatgtaatta 18634065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 280
Target Start/End: Complemental strand, 24362304 - 24362213
Alignment:
Q  187 atacggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    ||||||| ||| |||||| | |||||||  |||| |||||| ||||||   ||||||||||||| | ||| |||||||||||||||||||||||    
T  24362304 atacggatacggacaccggatacgacacagacaccgacacgccgacacc--gctaataatttgagagaatcacataattcagtgtaattatatg 24362213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 280
Target Start/End: Original strand, 29776013 - 29776084
Alignment:
Q  207 cacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    ||||||||| ||| ||||| ||||||||  |||||||||||||| ||||| || ||||||||| ||||||||||    
T  29776013 cacgacacggacattgacaagtcgacac--tgctaataatttgagaaaatcacgtaattcagtataattatatg 29776084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 237 - 278
Target Start/End: Original strand, 3025556 - 3025597
Alignment:
Q  237 tgctaataatttgataaaattacataattcagtgtaattata 278  Q
    |||||||||||||| ||||| |||||||||||||||||||||    
T  3025556 tgctaataatttgagaaaatcacataattcagtgtaattata 3025597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 216 - 276
Target Start/End: Original strand, 22595980 - 22596038
Alignment:
Q  216 aacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||||||||||| |||||||  ||||||||||| | ||||| |||||||||||||||||||    
T  22595980 aacactgacacgccgacaca--gctaataatttaaaaaaataacataattcagtgtaatta 22596038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 206 - 278
Target Start/End: Complemental strand, 25192430 - 25192360
Alignment:
Q  206 acacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattata 278  Q
    |||||| ||| ||||||||||| |||||||  ||||||||||||| ||| | |||||||||||| ||||||||    
T  25192430 acacgatacggacactgacacgccgacaca--gctaataatttgaaaaagtgacataattcagtataattata 25192360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 206 - 270
Target Start/End: Complemental strand, 41838206 - 41838144
Alignment:
Q  206 acacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtg 270  Q
    |||||| ||| |||||||||||||||||||  ||||||||||| | ||||| |||||||||||||    
T  41838206 acacgatacggacactgacacgtcgacaca--gctaataatttaaaaaaatcacataattcagtg 41838144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 278
Target Start/End: Complemental strand, 926890 - 926801
Alignment:
Q  187 atacggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattata 278  Q
    ||||| ||||| |||||| |||||||||| ||||||||||| |   ||||| |||||||||||| |||||  |||  |||||||||||||||    
T  926890 atacgaacacggacaccggacacgacacggacactgacacgcc--aacactcctaataatttgagaaaatctcattgttcagtgtaattata 926801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 279
Target Start/End: Original strand, 14134706 - 14134746
Alignment:
Q  239 ctaataatttgataaaattacataattcagtgtaattatat 279  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  14134706 ctaataatttgagaaaatcacataattcagtgtaattatat 14134746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 280
Target Start/End: Original strand, 27213518 - 27213595
Alignment:
Q  201 accgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||| |||||||||| | || |||||| ||||||  |||||||||||| | ||||| |||||||||| ||||||||||||    
T  27213518 accggacacgacacggatacagacacgccgacac--tgctaataatttcagaaaatcacataattcactgtaattatatg 27213595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 276
Target Start/End: Original strand, 31556948 - 31557040
Alignment:
Q  181 tatgaaatacggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||||| |||||| ||| |||||| ||| |||| |  |||||||||| ||||||| |  ||||||||||| ||||| |||||||||||||||||||    
T  31556948 tatgaagtacggatacggacaccggacatgacatggtcactgacacgccgacacagt--taataatttga-aaaatcacataattcagtgtaatta 31557040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 280
Target Start/End: Complemental strand, 12606887 - 12606840
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||||||||||||||||| ||||| | |||||||| ||||||||||||    
T  12606887 acactgctaataatttgagaaaatcatataattcaatgtaattatatg 12606840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 267
Target Start/End: Complemental strand, 13437064 - 13436988
Alignment:
Q  189 acggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattca 267  Q
    ||||||| | |||||| ||| |||| | ||||||||||| |||||||  ||||||||||||| ||||| ||||||||||    
T  13437064 acggacatggacaccggacatgacatggacactgacacgccgacaca--gctaataatttgaaaaaatcacataattca 13436988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 206 - 276
Target Start/End: Original strand, 20873045 - 20873113
Alignment:
Q  206 acacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||||||||| ||||||||||| ||||| |  | ||||||||||| ||||| |||||||| ||||||||||    
T  20873045 acacgacacggacactgacacgccgacata--gataataatttgaaaaaatcacataatttagtgtaatta 20873113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 276
Target Start/End: Original strand, 25566842 - 25566885
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||| ||||||||||||| ||||| |||||||||||||||||||    
T  25566842 acacagctaataatttgaaaaaatcacataattcagtgtaatta 25566885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 276
Target Start/End: Complemental strand, 36450833 - 36450769
Alignment:
Q  210 gacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||||| ||||||||||| |||||||   |||||||||||| ||||| ||| |||||||||||||||    
T  36450833 gacacggacactgacacgccgacacaa--ctaataatttgaaaaaatcacagaattcagtgtaatta 36450769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 280
Target Start/End: Complemental strand, 39954337 - 39954290
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||| ||||||||||||| ||||| |||||||| ||||||||||||||    
T  39954337 acaccgctaataatttgagaaaatcacataatttagtgtaattatatg 39954290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 276
Target Start/End: Original strand, 40332192 - 40332235
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    ||||||| |||||||||| ||||| |||||||||||||||||||    
T  40332192 acactgcaaataatttgagaaaatcacataattcagtgtaatta 40332235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 276
Target Start/End: Complemental strand, 4673527 - 4673440
Alignment:
Q  187 atacggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    ||||||| ||| ||| || |||||||||  ||||||||||| |||||||  | ||||||||||| ||||| | | |||||||||||||||    
T  4673527 atacggatacggacatcggacacgacacagacactgacacgccgacaca--gataataatttgaaaaaatcataaaattcagtgtaatta 4673440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 278
Target Start/End: Complemental strand, 15816201 - 15816142
Alignment:
Q  217 acactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattata 278  Q
    ||||||||||| |||||||   |||||||||||| ||||| |||||||| ||||||||||||    
T  15816201 acactgacacgccgacacaa--ctaataatttgaaaaaatcacataatttagtgtaattata 15816142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 278
Target Start/End: Complemental strand, 20679467 - 20679408
Alignment:
Q  217 acactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattata 278  Q
    ||||||||| |||||||| |  |||||||||||| ||||| ||||| |||||||||||||||    
T  20679467 acactgacatgtcgacaccc--ctaataatttgagaaaatcacatagttcagtgtaattata 20679408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 238 - 280
Target Start/End: Original strand, 34222953 - 34222995
Alignment:
Q  238 gctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    ||||||||||| ||||||| |||||||| ||||||||||||||    
T  34222953 gctaataatttaataaaatcacataattaagtgtaattatatg 34222995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 276
Target Start/End: Original strand, 4948659 - 4948696
Alignment:
Q  239 ctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||||||||||| ||||| |||||||||||||||||||    
T  4948659 ctaataatttgaaaaaatcacataattcagtgtaatta 4948696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 276
Target Start/End: Complemental strand, 22197839 - 22197757
Alignment:
Q  192 gacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||||| |||||| |||||||||  ||||| ||||| | |||||  ||||||||||||| ||| | |||||||| ||||||||||    
T  22197839 gacacggacaccggacacgacacagacactaacacgccaacaca--gctaataatttgaaaaattcacataatttagtgtaatta 22197757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 274
Target Start/End: Original strand, 24857966 - 24858054
Alignment:
Q  187 atacggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttg---ataaaattacataattcagtgtaat 274  Q
    ||||||||||| |||||| |||||||||| |||  |||||| |||||||  | ||||||||||   | ||||| |||||||||||||||||    
T  24857966 atacggacacgaacaccggacacgacacggacatggacacgccgacaca--gttaataatttgaaaaaaaaatcacataattcagtgtaat 24858054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 280
Target Start/End: Complemental strand, 4122300 - 4122260
Alignment:
Q  240 taataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||||||| |||||||||| |||||||| ||||||||||||    
T  4122300 taataattagataaaattatataattcattgtaattatatg 4122260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 280
Target Start/End: Complemental strand, 4786389 - 4786349
Alignment:
Q  240 taataatttgataaaattacataattcagtgtaattatatg 280  Q
    ||||||||| | ||||| |||||||||||||||||||||||    
T  4786389 taataatttaagaaaatcacataattcagtgtaattatatg 4786349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 86
Target Start/End: Original strand, 12958196 - 12958248
Alignment:
Q  34 ccttggttaagttagaaaagacttgaaccatctcatccaagcactcttgggta 86  Q
    ||||||||||| ||||| ||||| |  |||||||||| |||||||||||||||    
T  12958196 ccttggttaagctagaagagactagttccatctcatctaagcactcttgggta 12958248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 276
Target Start/End: Original strand, 24669441 - 24669477
Alignment:
Q  240 taataatttgataaaattacataattcagtgtaatta 276  Q
    |||||||||||  ||||||||||||||||||||||||    
T  24669441 taataatttgaggaaattacataattcagtgtaatta 24669477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 275
Target Start/End: Complemental strand, 24727844 - 24727768
Alignment:
Q  199 acaccgaacacgacacgaacactgacacgtcgacacactgctaataatttg--ataaaattacataattcagtgtaatt 275  Q
    |||| |||||||||||  ||||||||||||| |||||   |||||||||||  | ||||||||||||| ||||||||||    
T  24727844 acactgaacacgacacatacactgacacgtcaacaca--actaataatttgaaaaaaaattacataatgcagtgtaatt 24727768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 276
Target Start/End: Complemental strand, 30271363 - 30271306
Alignment:
Q  217 acactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    ||||||||||| |||||||  |||||| |||||| ||||| ||||||| |||||||||||    
T  30271363 acactgacacgccgacaca--gctaatcatttgaaaaaatcacataatgcagtgtaatta 30271306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 280
Target Start/End: Complemental strand, 34201097 - 34201057
Alignment:
Q  240 taataatttgataaaattacataattcagtgtaattatatg 280  Q
    ||||||||||| ||||| |||||||||| ||||||||||||    
T  34201097 taataatttgagaaaatgacataattcaatgtaattatatg 34201057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 187 - 278
Target Start/End: Complemental strand, 263474 - 263385
Alignment:
Q  187 atacggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattata 278  Q
    ||||||||||| |||| | | |||||||| ||||||||| ||| ||||  |||||||||||||| ||||  |||||||||||||||||||||    
T  263474 atacggacacggacactggatacgacacggacactgacatgtcaacac--tgctaataatttgagaaaaccacataattcagtgtaattata 263385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 194 - 277
Target Start/End: Original strand, 241558 - 241639
Alignment:
Q  194 cacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattat 277  Q
    |||| |||||| |||||||||| ||||||||||| |||||||  ||||||||||||  ||||| |||||||| |||||||||||    
T  241558 cacggacaccggacacgacacggacactgacacgccgacaca--gctaataatttggaaaaatcacataatttagtgtaattat 241639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 210 - 276
Target Start/End: Original strand, 51791 - 51855
Alignment:
Q  210 gacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||||| ||||||||||| |||||||  ||||||||||||| ||||| |||||||||||||||||||    
T  51791 gacacggacactgacacgccgacaca--gctaataatttgaaaaaatcacataattcagtgtaatta 51855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 278
Target Start/End: Complemental strand, 225365 - 225281
Alignment:
Q  192 gacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattata 278  Q
    |||||| |||||| |||||||||| ||||||||||| |||||||  | ||||||||||| ||||| ||||||| || ||||||||||    
T  225365 gacacggacaccggacacgacacggacactgacacgccgacaca--gataataatttgagaaaatgacataatacaatgtaattata 225281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 276
Target Start/End: Original strand, 130439 - 130526
Alignment:
Q  187 atacggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    ||||||||||| |||||| |||||||||| ||| ||||| | |||||||  | ||||| ||||| ||||| |||||||||||||||||||    
T  130439 atacggacacggacaccggacacgacacggacaatgacaagccgacaca--gttaatagtttgaaaaaatcacataattcagtgtaatta 130526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 208 - 276
Target Start/End: Original strand, 63750 - 63817
Alignment:
Q  208 acgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||||||| ||| ||||||||| | |||| ||||||||||||| ||||||||||||||||||| |||||    
T  63750 acgacacggacaatgacacgtcta-acaccgctaataatttgagaaaattacataattcagtgcaatta 63817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 217 - 276
Target Start/End: Original strand, 92794 - 92851
Alignment:
Q  217 acactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    ||||||||||| ||||||   ||||||||||||| |||||||||||||||||||||||||    
T  92794 acactgacacgccgacacc--gctaataatttgagaaaattacataattcagtgtaatta 92851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1528 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 280
Target Start/End: Original strand, 1036 - 1083
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||| ||||||||||||| |||||||||||||||||||||| ||||||    
T  1036 acaccgctaataatttgaaaaaattacataattcagtgtaactatatg 1083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 280
Target Start/End: Original strand, 6313 - 6360
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||||||||||||||||| |||||| ||||||||| ||||||||||||    
T  6313 acactgctaataatttgacaaaattgcataattcaatgtaattatatg 6360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 280
Target Start/End: Complemental strand, 135370 - 135323
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||||||||||||||||| ||||| ||||||||| |||||||||||||    
T  135370 acactgctaataatttgagaaaatcacataattctgtgtaattatatg 135323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 276
Target Start/End: Complemental strand, 178909 - 178833
Alignment:
Q  199 acaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaatta-cataattcagtgtaatta 276  Q
    |||||| |||||||||| ||||||||||| |||||||   |||||||||||| ||||| | ||||||||||||||||||    
T  178909 acaccggacacgacacggacactgacacgccgacaca--actaataatttgaaaaaatcatcataattcagtgtaatta 178833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 206 - 276
Target Start/End: Complemental strand, 192332 - 192264
Alignment:
Q  206 acacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||||| ||| ||||||||||| ||||||  |  ||||||||||| ||||||||||||||| |||||||||    
T  192332 acacgatacggacactgacacgccgacaccgt--taataatttgagaaaattacataattcggtgtaatta 192264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 276
Target Start/End: Complemental strand, 7104 - 7047
Alignment:
Q  217 acactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    ||||||| |||||||||||  ||||||||||||| |||||||||||||| ||| ||||||    
T  7104 acactgatacgtcgacaca--gctaataatttgaaaaaattacataatttagtataatta 7047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 276
Target Start/End: Original strand, 13359 - 13444
Alignment:
Q  189 acggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    ||||| ||| |||||| | | |||||| ||||||||||| |||||||   |||||||||||| ||||| ||||||||||||| |||||    
T  13359 acggatacggacaccggagatgacacggacactgacacgccgacacaa--ctaataatttgagaaaatcacataattcagtgcaatta 13444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 276
Target Start/End: Complemental strand, 21968 - 21883
Alignment:
Q  189 acggacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    ||||| ||| |||||| | | |||||| ||||||||||| |||||||   |||||||||||| ||||| ||||||||||||| |||||    
T  21968 acggatacggacaccggagatgacacggacactgacacgccgacacaa--ctaataatttgagaaaatcacataattcagtgcaatta 21883  T

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Target: scaffold0123 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 280
Target Start/End: Complemental strand, 44583 - 44536
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||| ||||| ||||||| ||||| |||||||||||||||||||||||    
T  44583 acaccgctaaaaatttgagaaaatcacataattcagtgtaattatatg 44536  T

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Target: scaffold0122 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 192 - 278
Target Start/End: Original strand, 8628 - 8712
Alignment:
Q  192 gacacgcacaccgaacacgacacgaacactgacacgtcgacacactgctaataatttgataaaattacataattcagtgtaattata 278  Q
    |||||| |||||| |||||||| | ||||||||||||||  ||||| ||||||||||   ||||| ||||| |||||| ||||||||    
T  8628 gacacggacaccggacacgacatggacactgacacgtcg--acacttctaataatttaggaaaatcacatagttcagtataattata 8712  T

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Target: scaffold0066 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 276
Target Start/End: Complemental strand, 33421 - 33378
Alignment:
Q  233 acactgctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||| ||||||||||||| ||||| |||||||||||||||||||    
T  33421 acacagctaataatttgaaaaaataacataattcagtgtaatta 33378  T

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Target: scaffold0050 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 240 - 278
Target Start/End: Original strand, 70286 - 70324
Alignment:
Q  240 taataatttgataaaattacataattcagtgtaattata 278  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  70286 taataatttgaaaaaataacataattcagtgtaattata 70324  T

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Target: scaffold0361 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 276
Target Start/End: Original strand, 14537 - 14574
Alignment:
Q  239 ctaataatttgataaaattacataattcagtgtaatta 276  Q
    |||||||||||| ||||| |||||||||||||||||||    
T  14537 ctaataatttgaaaaaatcacataattcagtgtaatta 14574  T

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Target: scaffold0044 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 278
Target Start/End: Original strand, 53189 - 53226
Alignment:
Q  241 aataatttgataaaattacataattcagtgtaattata 278  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  53189 aataatttgagaaaatcacataattcagtgtaattata 53226  T

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Target: scaffold0036 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 280
Target Start/End: Complemental strand, 9799 - 9758
Alignment:
Q  239 ctaataatttgataaaattacataattcagtgtaattatatg 280  Q
    |||||||||||| ||||| || ||||||||||||||||||||    
T  9799 ctaataatttgagaaaatcacttaattcagtgtaattatatg 9758  T

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