View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7821_low_6 (Length: 265)

Name: NF7821_low_6
Description: NF7821
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7821_low_6
NF7821_low_6
[»] chr5 (31 HSPs)
chr5 (27-244)||(13592309-13592526)
chr5 (27-205)||(23648495-23648672)
chr5 (27-205)||(23809900-23810077)
chr5 (27-247)||(7651441-7651660)
chr5 (27-234)||(31007801-31008006)
chr5 (28-106)||(29616013-29616091)
chr5 (27-156)||(39239009-39239138)
chr5 (104-205)||(29615805-29615904)
chr5 (27-105)||(42804323-42804401)
chr5 (27-89)||(19241775-19241837)
chr5 (29-88)||(3455287-3455346)
chr5 (27-156)||(13479069-13479198)
chr5 (27-88)||(25670361-25670422)
chr5 (27-88)||(32363006-32363067)
chr5 (112-244)||(42804075-42804205)
chr5 (29-89)||(39008972-39009032)
chr5 (29-86)||(23090000-23090057)
chr5 (27-86)||(27405739-27405798)
chr5 (27-89)||(42318351-42318413)
chr5 (29-74)||(4218985-4219030)
chr5 (27-88)||(9958147-9958208)
chr5 (27-76)||(27946080-27946129)
chr5 (27-76)||(32972942-32972991)
chr5 (27-76)||(40892251-40892300)
chr5 (27-94)||(30644586-30644653)
chr5 (30-93)||(36571941-36572004)
chr5 (27-74)||(14279287-14279334)
chr5 (197-247)||(23810080-23810130)
chr5 (30-74)||(34528974-34529018)
chr5 (29-93)||(4938548-4938611)
chr5 (30-74)||(15973056-15973100)
[»] chr2 (20 HSPs)
chr2 (27-246)||(44280573-44280803)
chr2 (27-244)||(36527280-36527509)
chr2 (27-246)||(14383439-14383669)
chr2 (27-106)||(43022149-43022228)
chr2 (27-89)||(22349444-22349506)
chr2 (29-89)||(17928747-17928807)
chr2 (29-89)||(39490592-39490652)
chr2 (29-89)||(36209022-36209082)
chr2 (29-88)||(5144920-5144979)
chr2 (27-93)||(13151156-13151222)
chr2 (29-87)||(17486261-17486319)
chr2 (29-74)||(1308244-1308289)
chr2 (27-76)||(7585088-7585137)
chr2 (27-88)||(9118286-9118347)
chr2 (28-88)||(7762739-7762799)
chr2 (27-87)||(1072612-1072672)
chr2 (118-213)||(22349211-22349307)
chr2 (28-75)||(14151822-14151869)
chr2 (27-105)||(6363841-6363919)
chr2 (120-213)||(43022350-43022444)
[»] chr1 (29 HSPs)
chr1 (27-247)||(29919828-29920060)
chr1 (27-244)||(51493848-51494077)
chr1 (28-247)||(37690670-37690901)
chr1 (27-205)||(45622956-45623135)
chr1 (27-246)||(14097155-14097384)
chr1 (27-105)||(47297125-47297203)
chr1 (29-89)||(31159891-31159951)
chr1 (27-89)||(48384720-48384782)
chr1 (27-81)||(19578471-19578525)
chr1 (40-105)||(17675848-17675913)
chr1 (27-88)||(29524362-29524423)
chr1 (32-105)||(30878163-30878236)
chr1 (27-88)||(45455453-45455514)
chr1 (27-93)||(10265515-10265581)
chr1 (27-88)||(37823066-37823127)
chr1 (27-93)||(36231382-36231448)
chr1 (27-76)||(2474679-2474728)
chr1 (27-88)||(33167676-33167737)
chr1 (28-93)||(43739490-43739555)
chr1 (29-88)||(45363941-45364000)
chr1 (29-71)||(51156258-51156300)
chr1 (28-105)||(51523720-51523797)
chr1 (27-67)||(17675913-17675953)
chr1 (27-74)||(8471674-8471721)
chr1 (120-213)||(48384487-48384581)
chr1 (102-163)||(31160076-31160137)
chr1 (165-214)||(47296927-47296976)
chr1 (30-74)||(3754612-3754656)
chr1 (208-244)||(45622906-45622942)
[»] chr3 (45 HSPs)
chr3 (27-244)||(4046585-4046811)
chr3 (27-246)||(51998620-51998847)
chr3 (28-213)||(37182497-37182680)
chr3 (27-245)||(50734483-50734713)
chr3 (27-245)||(50778142-50778372)
chr3 (27-234)||(29702122-29702329)
chr3 (30-234)||(41183730-41183931)
chr3 (27-105)||(42564411-42564489)
chr3 (28-105)||(33187638-33187715)
chr3 (27-105)||(4873696-4873774)
chr3 (27-89)||(32119979-32120041)
chr3 (27-89)||(6044874-6044936)
chr3 (27-89)||(44084774-44084836)
chr3 (27-88)||(12975290-12975351)
chr3 (29-105)||(6833081-6833157)
chr3 (27-134)||(36177982-36178089)
chr3 (27-134)||(51305024-51305131)
chr3 (27-89)||(10424204-10424266)
chr3 (29-86)||(11908499-11908556)
chr3 (27-88)||(48886378-48886439)
chr3 (27-88)||(51999618-51999679)
chr3 (27-76)||(49026981-49027030)
chr3 (27-91)||(7008576-7008640)
chr3 (28-88)||(20140024-20140084)
chr3 (27-87)||(31169823-31169883)
chr3 (29-89)||(35471868-35471928)
chr3 (28-76)||(50415362-50415410)
chr3 (29-75)||(26162103-26162149)
chr3 (27-105)||(46136807-46136885)
chr3 (27-76)||(30415015-30415064)
chr3 (27-88)||(55027223-55027284)
chr3 (27-105)||(35540099-35540177)
chr3 (27-76)||(27848050-27848099)
chr3 (29-86)||(38571700-38571757)
chr3 (28-93)||(43475880-43475945)
chr3 (37-89)||(33795084-33795136)
chr3 (27-75)||(49406894-49406942)
chr3 (165-236)||(4873449-4873520)
chr3 (120-213)||(6044641-6044735)
chr3 (27-93)||(15007654-15007720)
chr3 (110-172)||(42564605-42564667)
chr3 (115-172)||(10381108-10381165)
chr3 (29-74)||(15493340-15493385)
chr3 (30-74)||(46572518-46572562)
chr3 (29-73)||(47700499-47700543)
[»] chr8 (26 HSPs)
chr8 (27-244)||(45100400-45100629)
chr8 (27-166)||(42860384-42860525)
chr8 (27-105)||(15057048-15057126)
chr8 (103-234)||(15057235-15057364)
chr8 (27-156)||(26245092-26245221)
chr8 (27-156)||(40284069-40284198)
chr8 (27-88)||(44503730-44503791)
chr8 (29-89)||(44150349-44150409)
chr8 (29-89)||(29732149-29732209)
chr8 (27-89)||(38204818-38204880)
chr8 (31-88)||(31129003-31129060)
chr8 (29-76)||(1632977-1633024)
chr8 (29-88)||(23550210-23550269)
chr8 (28-98)||(7511297-7511367)
chr8 (27-93)||(13497730-13497796)
chr8 (27-89)||(13783737-13783799)
chr8 (27-76)||(1954810-1954859)
chr8 (27-88)||(13947898-13947959)
chr8 (29-81)||(43523822-43523874)
chr8 (28-87)||(30529203-30529262)
chr8 (27-74)||(35932322-35932369)
chr8 (27-87)||(12272010-12272070)
chr8 (103-182)||(43524638-43524716)
chr8 (192-234)||(42860554-42860596)
chr8 (199-234)||(43524609-43524644)
chr8 (29-75)||(17494136-17494182)
[»] chr4 (40 HSPs)
chr4 (27-240)||(52773353-52773576)
chr4 (27-242)||(55549436-55549663)
chr4 (27-234)||(38174003-38174209)
chr4 (27-246)||(16021308-16021526)
chr4 (27-234)||(52018110-52018313)
chr4 (27-105)||(33077397-33077475)
chr4 (114-234)||(33077179-33077296)
chr4 (27-156)||(27864372-27864501)
chr4 (27-89)||(3529802-3529864)
chr4 (27-89)||(8995221-8995283)
chr4 (27-89)||(34198800-34198862)
chr4 (27-89)||(40721472-40721534)
chr4 (27-106)||(13113989-13114065)
chr4 (27-156)||(19273377-19273506)
chr4 (27-156)||(35809855-35809984)
chr4 (28-88)||(33609420-33609480)
chr4 (27-89)||(34463085-34463147)
chr4 (27-88)||(33523841-33523902)
chr4 (27-88)||(48403456-48403517)
chr4 (27-88)||(53347244-53347305)
chr4 (103-185)||(13114102-13114181)
chr4 (29-89)||(18468907-18468967)
chr4 (27-89)||(16171445-16171507)
chr4 (27-89)||(23389514-23389576)
chr4 (27-88)||(56054708-56054769)
chr4 (27-93)||(28901575-28901641)
chr4 (27-76)||(3614804-3614853)
chr4 (27-156)||(13093649-13093778)
chr4 (27-88)||(48506144-48506205)
chr4 (27-87)||(23539222-23539282)
chr4 (29-75)||(4982121-4982167)
chr4 (27-105)||(28447683-28447761)
chr4 (27-93)||(31336081-31336147)
chr4 (27-105)||(34434082-34434160)
chr4 (35-76)||(17329468-17329509)
chr4 (120-213)||(8995422-8995516)
chr4 (115-172)||(34198607-34198664)
chr4 (115-172)||(40721670-40721727)
chr4 (102-185)||(34462884-34462967)
chr4 (120-213)||(3529569-3529663)
[»] chr7 (25 HSPs)
chr7 (27-246)||(30720582-30720801)
chr7 (103-247)||(40299962-40300104)
chr7 (27-105)||(33508139-33508217)
chr7 (27-106)||(42882056-42882135)
chr7 (27-105)||(22660328-22660405)
chr7 (27-89)||(47158957-47159019)
chr7 (103-234)||(22660514-22660642)
chr7 (27-156)||(45548870-45548999)
chr7 (27-89)||(28317626-28317688)
chr7 (27-105)||(43201467-43201545)
chr7 (27-88)||(39770185-39770246)
chr7 (29-88)||(38352076-38352135)
chr7 (28-89)||(37952242-37952303)
chr7 (29-89)||(26815590-26815650)
chr7 (29-89)||(32749409-32749469)
chr7 (29-89)||(40690795-40690855)
chr7 (42-105)||(40300168-40300231)
chr7 (27-105)||(115142-115220)
chr7 (29-74)||(20354719-20354764)
chr7 (27-76)||(36521965-36522014)
chr7 (30-93)||(30567075-30567138)
chr7 (152-212)||(23780011-23780071)
chr7 (27-74)||(38970506-38970553)
chr7 (110-172)||(28317432-28317494)
chr7 (118-163)||(42882255-42882300)
[»] scaffold1905 (3 HSPs)
scaffold1905 (103-234)||(572-700)
scaffold1905 (27-105)||(385-463)
scaffold1905 (29-88)||(982-1041)
[»] chr6 (13 HSPs)
chr6 (27-106)||(10886697-10886776)
chr6 (110-234)||(10886890-10887011)
chr6 (27-134)||(26653656-26653763)
chr6 (27-134)||(26759624-26759731)
chr6 (28-88)||(24348944-24349004)
chr6 (27-76)||(8668901-8668950)
chr6 (27-88)||(12502372-12502433)
chr6 (28-93)||(30446724-30446789)
chr6 (28-105)||(34242864-34242940)
chr6 (27-76)||(34841944-34841993)
chr6 (27-87)||(12513482-12513542)
chr6 (28-75)||(8675163-8675210)
chr6 (28-94)||(8222573-8222639)
[»] scaffold0021 (1 HSPs)
scaffold0021 (29-88)||(109773-109832)
[»] scaffold0004 (1 HSPs)
scaffold0004 (29-92)||(106298-106361)
[»] scaffold0015 (1 HSPs)
scaffold0015 (29-89)||(83462-83522)
[»] scaffold1183 (1 HSPs)
scaffold1183 (27-88)||(111-172)


Alignment Details
Target: chr5 (Bit Score: 198; Significance: 1e-108; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 27 - 244
Target Start/End: Complemental strand, 13592526 - 13592309
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaacatgtcaagtgtctccgtgggccaggcattcaac 126  Q
    |||||| |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  13592526 ttattttcaatgaaataattgagtccaaattattaagaagttaaaaatccgagcagccaatcaaaacatgccaagtgtctccgtgggccaggcattcaac 13592427  T
Q  127 atgttgaattgtttcaacacttccctcctccaactcacttttttcccatttcaacaccctcccctacaatggttcaacatgttgaatggcaaattcaaga 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  13592426 atgttgaattgtttcaacacttccctcctccaactcacttttttcccatttcaacaccctcccctacaatggttcaacatgttgaatggcaaattcaaca 13592327  T
Q  227 tgccattgtaaatggtct 244  Q
    ||||||||||||||||||    
T  13592326 tgccattgtaaatggtct 13592309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 27 - 205
Target Start/End: Complemental strand, 23648672 - 23648495
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaacatgtcaagtgtctccgtgggccaggcattcaac 126  Q
    |||||| ||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  23648672 ttatttacaatgaaataattagatccaaattattaagaagataaaaatacgagcagccaatcaaaacatgccaagtgtctccgtgggccagacattcaac 23648573  T
Q  127 atgttgaattgtttcaacacttccctcctccaactcacttttttcccatttcaacaccctcccctacaatggttcaaca 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  23648572 atgttgaattgtttcaacacttccctcctccaactcacttttttcccatttcaacaccc-cccctacaatggttcaaca 23648495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 27 - 205
Target Start/End: Original strand, 23809900 - 23810077
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaacatgtcaagtgtctccgtgggccaggcattcaac 126  Q
    |||||| ||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  23809900 ttatttacaatgaaataattagatccaaattattaagaagataaaaatacgagcagccaatcaaaacatgccaagtgtctccgtgggccagacattcaac 23809999  T
Q  127 atgttgaattgtttcaacacttccctcctccaactcacttttttcccatttcaacaccctcccctacaatggttcaaca 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  23810000 atgttgaattgtttcaacacttccctcctccaactcacttttttcccatttcaacaccc-cccctacaatggttcaaca 23810077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 27 - 247
Target Start/End: Original strand, 7651441 - 7651660
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaacatgtcaagtgtctccgtgggccaggcattcaac 126  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||  |||||||| || ||||||    
T  7651441 ttatttgcaataaaataattgagtccaaattattaagaagataaaaatccaagcatccaatcaaaacatgtcaagtgtctatgtgggccatgctttcaac 7651540  T
Q  127 atgttgaattgtttcaacacttccctcctccaactcacttttttcccatttcaacaccctcccctacaatggttcaacatgttgaatggcaaattcaaga 226  Q
    ||||||||||  |||||||| || |||||||||||||  ||||||||| ||||||| || ||||||||||||||||||||||||||| |||||||||| |    
T  7651541 atgttgaatttgttcaacacctctctcctccaactcatatttttcccaattcaacaacc-cccctacaatggttcaacatgttgaattgcaaattcaaca 7651639  T
Q  227 tgccattgtaaatggtcttat 247  Q
    | |||||| | || |||||||    
T  7651640 tcccattgcacatagtcttat 7651660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 27 - 234
Target Start/End: Complemental strand, 31008006 - 31007801
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaacatgtcaagtgtctccgtgggccaggcattcaac 126  Q
    ||||||||||| ||||||||| |||||||||||||| ||||||||||||| |||| |||||||||||||| |||||||||  |||||||| || ||||||    
T  31008006 ttatttgcaataaaataattgagtccaaattattaaaaagataaaaatccaagcatccaatcaaaacatgccaagtgtctatgtgggccatgctttcaac 31007907  T
Q  127 atgttgaattgtttcaacacttccctcctccaactcacttttttcccatttcaacaccctcccctacaatggttcaacatgttgaatggcaaattcaaga 226  Q
    ||||||||||  |||||||| || |||||||||||||  ||||||||| ||||||| |  ||||||||||||||||||||||||||| |||||||||| |    
T  31007906 atgttgaattagttcaacacctctctcctccaactcatatttttcccaattcaacaac--cccctacaatggttcaacatgttgaattgcaaattcaaca 31007809  T
Q  227 tgccattg 234  Q
    | ||||||    
T  31007808 ttccattg 31007801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 28 - 106
Target Start/End: Complemental strand, 29616091 - 29616013
Alignment:
Q  28 tatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaacatgtcaagtgtct 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  29616091 tatttgcaatgaaataattgggtccaaattattaagaagataaaaatccaagcagccaatcaaaacatgtcatgtgtct 29616013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 27 - 156
Target Start/End: Original strand, 39239009 - 39239138
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaacatgtcaagtgtctccgtgggccaggcattcaac 126  Q
    |||||||| |||||||||||| ||||||||||||||||| |||||||||| |||||||||||| |||| | || ||||| | | ||||||||| ||||||    
T  39239009 ttatttgctatgaaataattgagtccaaattattaagaaaataaaaatccaagcagccaatcataacaagccacgtgtcactgcgggccaggctttcaac 39239108  T
Q  127 atgttgaattgtttcaacacttccctcctc 156  Q
    ||||||||   ||||||||| || ||||||    
T  39239109 atgttgaaccttttcaacacctctctcctc 39239138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 104 - 205
Target Start/End: Complemental strand, 29615904 - 29615805
Alignment:
Q  104 tctccgtgggccaggcattcaacatgttgaattgtttcaacacttccctcctccaactcacttttttcccatttcaacaccctcccctacaatggttcaa 203  Q
    |||| ||||||||||| ||||||||||||||||| || ||||| || ||||||||||||| ||||||||||||||||||||  ||||||||| |||||||    
T  29615904 tctctgtgggccaggctttcaacatgttgaattgattgaacacctctctcctccaactcagttttttcccatttcaacacc--cccctacaacggttcaa 29615807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 27 - 105
Target Start/End: Complemental strand, 42804401 - 42804323
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaacatgtcaagtgtc 105  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| | || |||||||||||||||| ||||||||    
T  42804401 ttatttgcaatgaaataattgagtccaaattattaagaagataaaaattcaagtagccaatcaaaacatgccaagtgtc 42804323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 19241775 - 19241837
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatca 89  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  19241775 ttatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatca 19241837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 29 - 88
Target Start/End: Original strand, 3455287 - 3455346
Alignment:
Q  29 atttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatc 88  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  3455287 atttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatc 3455346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 156
Target Start/End: Complemental strand, 13479198 - 13479069
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaacatgtcaagtgtctccgtgggccaggcattcaac 126  Q
    |||||||| |||||||||||| ||||||||||||||||| |||||||| | |||||||||||  |||| | || ||||| | | ||||||| | ||||||    
T  13479198 ttatttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatcgtaacaagccacgtgtcactgcgggccagactttcaac 13479099  T
Q  127 atgttgaattgtttcaacacttccctcctc 156  Q
    ||||||||   ||||||||| || ||||||    
T  13479098 atgttgaaccttttcaacacctctctcctc 13479069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 88
Target Start/End: Complemental strand, 25670422 - 25670361
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatc 88  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  25670422 ttatttgctatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatc 25670361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 88
Target Start/End: Complemental strand, 32363067 - 32363006
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatc 88  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| || ||||||||    
T  32363067 ttatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagtagccaatc 32363006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 112 - 244
Target Start/End: Complemental strand, 42804205 - 42804075
Alignment:
Q  112 ggccaggcattcaacatgttgaattgtttcaacacttccctcctccaactcacttttttcccatttcaacaccctcccctacaatggttcaacatgttga 211  Q
    |||||| | |||||||| ||| |||  |||||||| || |||||||||||||  ||||||||| ||||||| ||  |||||||||| |||||||||||||    
T  42804205 ggccagactttcaacatattgtatttgttcaacacctctctcctccaactcagatttttcccaattcaacaacc--ccctacaatgattcaacatgttga 42804108  T
Q  212 atggcaaattcaagatgccattgtaaatggtct 244  Q
    || |||||||||| || |||||| | |||||||    
T  42804107 attgcaaattcaacatcccattgcacatggtct 42804075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 39008972 - 39009032
Alignment:
Q  29 atttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatca 89  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| || |||||||||    
T  39008972 atttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagtagccaatca 39009032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 23090000 - 23090057
Alignment:
Q  29 atttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaa 86  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||    
T  23090000 atttgcaatgaaataattgagtccaaattattaagaagataaaactccaagcagccaa 23090057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 27 - 86
Target Start/End: Complemental strand, 27405798 - 27405739
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaa 86  Q
    ||||||||||||||||||||| ||||||| |||||||| ||||||||||| |||||||||    
T  27405798 ttatttgcaatgaaataattgagtccaaaatattaagatgataaaaatccaagcagccaa 27405739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 42318351 - 42318413
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatca 89  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||   ||||||||||    
T  42318351 ttatttgcaatgaaataattgagtccaaagtattaagaagataaaaatccagccagccaatca 42318413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 4219030 - 4218985
Alignment:
Q  29 atttgcaatgaaataattgggtccaaattattaagaagataaaaat 74  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  4219030 atttgcaatgaaataattgagtccaaattattaagaagataaaaat 4218985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 27 - 88
Target Start/End: Original strand, 9958147 - 9958208
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatc 88  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||| | |||| ||||||    
T  9958147 ttatttgctatgaaataattgagtccaaattattaagaagataaaaattcaagcaaccaatc 9958208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 27 - 76
Target Start/End: Original strand, 27946080 - 27946129
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatcc 76  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  27946080 ttatttgcaatgaaataattgagtccaaagtattaagaagataaaaatcc 27946129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 27 - 76
Target Start/End: Complemental strand, 32972991 - 32972942
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatcc 76  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  32972991 ttatttgcaatgaaataattgagtccaaagtattaagaagataaaaatcc 32972942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 27 - 76
Target Start/End: Original strand, 40892251 - 40892300
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatcc 76  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  40892251 ttatttgcaatgaaataattgagtccaaagtattaagaagataaaaatcc 40892300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 94
Target Start/End: Complemental strand, 30644653 - 30644586
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaaca 94  Q
    ||||||||||||||||||||| ||||||| |||||||| ||||||||| | | ||||||||| |||||    
T  30644653 ttatttgcaatgaaataattgagtccaaaatattaagatgataaaaattcaaccagccaatcgaaaca 30644586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 36572004 - 36571941
Alignment:
Q  30 tttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaac 93  Q
    ||||||||||||||||||  |||||| |||||||| ||||||||||| ||||||||||| ||||    
T  36572004 tttgcaatgaaataattgaatccaaaatattaagatgataaaaatccaagcagccaatcgaaac 36571941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 74
Target Start/End: Original strand, 14279287 - 14279334
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaat 74  Q
    ||||||||||||||||||||| || ||||||||||||| |||||||||    
T  14279287 ttatttgcaatgaaataattgagttcaaattattaagatgataaaaat 14279334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 197 - 247
Target Start/End: Original strand, 23810080 - 23810130
Alignment:
Q  197 ggttcaacatgttgaatggcaaattcaagatgccattgtaaatggtcttat 247  Q
    |||||||||||||||||||||||||||| ||||||||| |  |||||||||    
T  23810080 ggttcaacatgttgaatggcaaattcaacatgccattgcacttggtcttat 23810130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 74
Target Start/End: Complemental strand, 34529018 - 34528974
Alignment:
Q  30 tttgcaatgaaataattgggtccaaattattaagaagataaaaat 74  Q
    |||||||||||||||||| || ||||||||||||| |||||||||    
T  34529018 tttgcaatgaaataattgagttcaaattattaagatgataaaaat 34528974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 93
Target Start/End: Original strand, 4938548 - 4938611
Alignment:
Q  29 atttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaac 93  Q
    |||||||||||| |||||| || ||||||||||||| |||||||||   ||||||||||| ||||    
T  4938548 atttgcaatgaa-taattgagttcaaattattaagatgataaaaatttaagcagccaatcgaaac 4938611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 74
Target Start/End: Original strand, 15973056 - 15973100
Alignment:
Q  30 tttgcaatgaaataattgggtccaaattattaagaagataaaaat 74  Q
    |||| ||||||||||||| || |||||||||||||||| ||||||    
T  15973056 tttgaaatgaaataattgagttcaaattattaagaagagaaaaat 15973100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 189; Significance: 1e-102; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 27 - 246
Target Start/End: Original strand, 44280573 - 44280803
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaacatgtcaagtgtctccgtgggccaggcattcaac 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44280573 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaacatgtcaagtgtctccgtgggccaggcattcaac 44280672  T
Q  127 atgttgaattgtttcaacacttccctcctccaactcacttttttcccatttcaacaccctcccctacaat-----------ggttcaacatgttgaatgg 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           |||||||||||||||||||    
T  44280673 atgttgaattgtttcaacacttccctcctccaactcacttttttcccatttcaacaccctcccctacaatggttcaacaagggttcaacatgttgaatgg 44280772  T
Q  216 caaattcaagatgccattgtaaatggtctta 246  Q
    ||||||||| |||||||||||||||||||||    
T  44280773 caaattcaacatgccattgtaaatggtctta 44280803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 27 - 244
Target Start/End: Original strand, 36527280 - 36527509
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaacatgtcaagtgtctccgtgggccaggcattcaac 126  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |  | |||||||||||||||||||||||||||||    
T  36527280 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcagcgcgcgccaagtgtctccgtgggccaggcattcaac 36527379  T
Q  127 atgttgaattgtttcaacacttccctcctccaactcacttttttcccatttcaacaccctcc-cctacaat-----------ggttcaacatgttgaatg 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||           ||||||||||||||||||    
T  36527380 atgttgaattgtttcaacacttccctcctccaactcacttttttcccatttcaacaccccccacctacaatggttcaacaagggttcaacatgttgaatg 36527479  T
Q  215 gcaaattcaagatgccattgtaaatggtct 244  Q
    |||||||||| |||||||||||||||||||    
T  36527480 gcaaattcaacatgccattgtaaatggtct 36527509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 27 - 246
Target Start/End: Original strand, 14383439 - 14383669
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaacatgtcaagtgtctccgtgggccaggcattcaac 126  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |  | ||||||||| |||||||||||||||||||    
T  14383439 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcagcgcgcgccaagtgtcttcgtgggccaggcattcaac 14383538  T
Q  127 atgttgaattgtttcaacacttccctcctccaactcacttttttcccatttcaacaccctcc-cctacaat-----------ggttcaacatgttgaatg 214  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||           ||||||||||||||||||    
T  14383539 atgttgaattgtttcaacacttccctcctccaactcac-tttttcccatttcaacaccccccacctacaatggttcaacaagggttcaacatgttgaatg 14383637  T
Q  215 gcaaattcaagatgccattgtaaatggtctta 246  Q
    |||||||||| |||||||||||||||||||||    
T  14383638 gcaaattcaacatgccattgtaaatggtctta 14383669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 27 - 106
Target Start/End: Original strand, 43022149 - 43022228
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaacatgtcaagtgtct 106  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| |  |||||| ||||||    
T  43022149 ttatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatcacataatgtcatgtgtct 43022228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 22349506 - 22349444
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatca 89  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  22349506 ttatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatca 22349444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 17928807 - 17928747
Alignment:
Q  29 atttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatca 89  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  17928807 atttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatca 17928747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 39490592 - 39490652
Alignment:
Q  29 atttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatca 89  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||    
T  39490592 atttgcaatgaaataattgagtccaaattattaagaagataaaaattcaagcagccaatca 39490652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 36209082 - 36209022
Alignment:
Q  29 atttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatca 89  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| |  |||||||||    
T  36209082 atttgcaatgaaataattgagtccaaattattaagaagataaaaatccaaaaagccaatca 36209022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 29 - 88
Target Start/End: Complemental strand, 5144979 - 5144920
Alignment:
Q  29 atttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatc 88  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||  |||||||||||    
T  5144979 atttgcaatgaaataatcgagtccaaattattaagaagataaaaatcgaagcagccaatc 5144920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 93
Target Start/End: Complemental strand, 13151222 - 13151156
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaac 93  Q
    ||||||||||||||||||||| || ||||||||||||| ||||||||||  ||||||||||| ||||    
T  13151222 ttatttgcaatgaaataattgagttcaaattattaagatgataaaaatctaagcagccaatcgaaac 13151156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 17486261 - 17486319
Alignment:
Q  29 atttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaat 87  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||| | ||||||||||    
T  17486261 atttgcactgaaataattgagtccaaattattaagaagataaaaattcaagcagccaat 17486319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 1308289 - 1308244
Alignment:
Q  29 atttgcaatgaaataattgggtccaaattattaagaagataaaaat 74  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  1308289 atttgcaatgaaataattgagtccaaattattaagaagataaaaat 1308244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 27 - 76
Target Start/End: Complemental strand, 7585137 - 7585088
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatcc 76  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  7585137 ttatttgcaatgaaataattgagtccaaagtattaagaagataaaaatcc 7585088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 27 - 88
Target Start/End: Original strand, 9118286 - 9118347
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatc 88  Q
    ||||||||||||||||||||| ||| ||| |||||||| ||||||||||| |||||||||||    
T  9118286 ttatttgcaatgaaataattgagtctaaaatattaagatgataaaaatccaagcagccaatc 9118347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 7762799 - 7762739
Alignment:
Q  28 tatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatc 88  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||| | ||||| |||||    
T  7762799 tatttgctatgaaataattgagtccaaattattaagaagataaaaattcaagcagtcaatc 7762739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 1072672 - 1072612
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaat 87  Q
    ||||||||||||||||||||| ||| ||| |||||||| ||||||||||| ||||| ||||    
T  1072672 ttatttgcaatgaaataattgagtctaaaatattaagatgataaaaatccaagcagtcaat 1072612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 118 - 213
Target Start/End: Complemental strand, 22349307 - 22349211
Alignment:
Q  118 gcattcaacatgttgaattgtttcaacacttccctcctccaactcacttttttcc-catttcaacaccctcccctacaatggttcaacatgttgaat 213  Q
    |||||||||| |||||| | ||||| ||||||||||||||||||||  |||||||   ||||||||||||||  | ||| | |||||||||||||||    
T  22349307 gcattcaacaagttgaactctttcatcacttccctcctccaactcagatttttccttctttcaacaccctccattgcaaggcttcaacatgttgaat 22349211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 75
Target Start/End: Complemental strand, 14151869 - 14151822
Alignment:
Q  28 tatttgcaatgaaataattgggtccaaattattaagaagataaaaatc 75  Q
    |||||||||||||||||||| || ||||||||||||| ||||||||||    
T  14151869 tatttgcaatgaaataattgagttcaaattattaagatgataaaaatc 14151822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 6363841 - 6363919
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaacatgtcaagtgtc 105  Q
    ||||||||||| ||||||||| ||| ||| |||||||| ||||||||||  |||||||||||  |||||  ||||||||    
T  6363841 ttatttgcaattaaataattgagtctaaaatattaagatgataaaaatcgaagcagccaatcgtaacataccaagtgtc 6363919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 213
Target Start/End: Original strand, 43022350 - 43022444
Alignment:
Q  120 attcaacatgttgaattgtttcaacacttccctcctccaactcacttttttcc-catttcaacaccctcccctacaatggttcaacatgttgaat 213  Q
    |||||||  |||||| | ||||| ||||||||||||||||||||  |||||||   ||||||||||||||  | ||| | |||||||||||||||    
T  43022350 attcaactagttgaactctttcatcacttccctcctccaactcagatttttccttctttcaacaccctccattgcaaggcttcaacatgttgaat 43022444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 151; Significance: 6e-80; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 27 - 247
Target Start/End: Original strand, 29919828 - 29920060
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaacatgtcaagtgtctccgtgggccaggcattcaac 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||   |  | |||||||||||||||||||||||||||||    
T  29919828 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagtagccaatcagcgcgcgccaagtgtctccgtgggccaggcattcaac 29919927  T
Q  127 atgttgaattgtttcaacacttccctcctccaactcacttttttcccatttcaacaccctcc-cct-----------acaatggttcaacatgttgaatg 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||           |||||||||||||||||||||||    
T  29919928 atgttgaattgtttcaacacttccctcctccaactcacttttttcccatttcaacaccccccacctacaatggttcaacaatggttcaacatgttgaatg 29920027  T
Q  215 gcaaattcaagatgccattgtaaatggtcttat 247  Q
    |||||||||| ||||||||||||||||||||||    
T  29920028 gcaaattcaacatgccattgtaaatggtcttat 29920060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 27 - 244
Target Start/End: Complemental strand, 51494077 - 51493848
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaacatgtcaagtgtctccgtgggccaggcattcaac 126  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||  | |||||||||||||||||||||||||||||    
T  51494077 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagtcaatcagcacgcgccaagtgtctccgtgggccaggcattcaac 51493978  T
Q  127 atgttgaattgtttcaacacttccctcctccaactcacttttttcccatttcaacaccctcc-cctacaat-----------ggttcaacatgttgaatg 214  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || ||||||||           ||||||||||||||||||    
T  51493977 atgttgaattgtttcaacacttccctcctccaactcactttttccccatttcaacaccccccacctacaatggttcaacaagggttcaacatgttgaatg 51493878  T
Q  215 gcaaattcaagatgccattgtaaatggtct 244  Q
    |||||||||| |||||||||||||||||||    
T  51493877 gcaaattcaacatgccattgtaaatggtct 51493848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 28 - 247
Target Start/End: Complemental strand, 37690901 - 37690670
Alignment:
Q  28 tatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaacatgtcaagtgtctccgtgggccaggcattcaaca 127  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||   |  | ||||||||||||||||||||||||||||||    
T  37690901 tatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagtcaatcagcgcgcgccaagtgtctccgtgggccaggcattcaaca 37690802  T
Q  128 tgttgaattgtttcaacacttccctcctccaactcacttttttcccatttcaacaccctcc-cctacaat-----------ggttcaacatgttgaatgg 215  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || ||||||||           |||||||||||||||||||    
T  37690801 tgttgaattgtttcaacacttccctcctccaactcactttttccccatttcaacaccccccacctacaatgattcaacaagggttcaacatgttgaatgg 37690702  T
Q  216 caaattcaagatgccattgtaaatggtcttat 247  Q
    ||||||||| ||||||||||||||||||||||    
T  37690701 caaattcaacatgccattgtaaatggtcttat 37690670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 27 - 205
Target Start/End: Complemental strand, 45623135 - 45622956
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaacatgtcaagtgtctccgtgggccaggcattcaac 126  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |  | |||||||||||||||||||||||||||||    
T  45623135 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcagcgcgcgccaagtgtctccgtgggccaggcattcaac 45623036  T
Q  127 atgttgaattgtttcaacacttccctcctccaactcacttttttcccatttcaacaccctcc-cctacaatggttcaaca 205  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||    
T  45623035 atgttgaattgtttcaacacttccctcctccaactcactttttccccatttcaacaccccccacctacaatggttcaaca 45622956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 27 - 246
Target Start/End: Original strand, 14097155 - 14097384
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaacatgtcaagtgtctccgtgggccaggcattcaac 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||   |  | |||||||||| ||||||||||||||||||    
T  14097155 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcaaccaatcagcgcgcgccaagtgtctctgtgggccaggcattcaac 14097254  T
Q  127 atgttgaattgtttcaacacttccctcctccaactcacttttttcccatttcaacaccctcccctacaat-----------ggttcaacatgttgaatgg 215  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| | ||||||||           |||||||||||||||||||    
T  14097255 atgttgaattgtttcaacacttccctcctccaactcactttttcccca-ttcaacacccccacctacaatggttcaacaagggttcaacatgttgaatgg 14097353  T
Q  216 caaattcaagatgccattgtaaatggtctta 246  Q
    ||||||||| || ||||||||||||||||||    
T  14097354 caaattcaacataccattgtaaatggtctta 14097384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 27 - 105
Target Start/End: Complemental strand, 47297203 - 47297125
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaacatgtcaagtgtc 105  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  47297203 ttatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatcaaaacatgccaagtgtc 47297125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 31159891 - 31159951
Alignment:
Q  29 atttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatca 89  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  31159891 atttgcaatgaaataattgggtccaaattattaagaagataaaaatccaagcagccaatca 31159951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 48384782 - 48384720
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatca 89  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  48384782 ttatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatca 48384720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 27 - 81
Target Start/End: Complemental strand, 19578525 - 19578471
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagca 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  19578525 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatctgagca 19578471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 105
Target Start/End: Complemental strand, 17675913 - 17675848
Alignment:
Q  40 aataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaacatgtcaagtgtc 105  Q
    |||||||| |||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||    
T  17675913 aataattgagtccaaattattaagaagataaaaattcaagcagccaatcaaaacatgccaagtgtc 17675848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 88
Target Start/End: Original strand, 29524362 - 29524423
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatc 88  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| | |||||||||    
T  29524362 ttatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaaccagccaatc 29524423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 32 - 105
Target Start/End: Complemental strand, 30878236 - 30878163
Alignment:
Q  32 tgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaacatgtcaagtgtc 105  Q
    ||||| |||||||||| ||||||||||||||||||||||||| || |||||||||||  |||||||||||||||    
T  30878236 tgcaacgaaataattgagtccaaattattaagaagataaaaacccaagcagccaatcgtaacatgtcaagtgtc 30878163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 88
Target Start/End: Complemental strand, 45455514 - 45455453
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatc 88  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||| |||||||||||    
T  45455514 ttatttgcaatgaaataattgagtccaaattattaagaagaaaaaaatccaagcagccaatc 45455453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 27 - 93
Target Start/End: Complemental strand, 10265581 - 10265515
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaac 93  Q
    ||||||||||||||||||||| ||||||| |||||||| ||||||||||| ||||||||||| ||||    
T  10265581 ttatttgcaatgaaataattgagtccaaaatattaagatgataaaaatccaagcagccaatcgaaac 10265515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 27 - 88
Target Start/End: Original strand, 37823066 - 37823127
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatc 88  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||  ||||| |||||    
T  37823066 ttatttgcaatgaaataattgagtccaaattattaagaagataaaaatctaagcagtcaatc 37823127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 93
Target Start/End: Original strand, 36231382 - 36231448
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaac 93  Q
    ||||||||||||||||||||| || |||| |||||||| ||||||||||| ||||||||||| ||||    
T  36231382 ttatttgcaatgaaataattgagttcaaaatattaagatgataaaaatccaagcagccaatcgaaac 36231448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 27 - 76
Target Start/End: Complemental strand, 2474728 - 2474679
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatcc 76  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  2474728 ttatttgcaatgaaataattgagtccaaagtattaagaagataaaaatcc 2474679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 27 - 88
Target Start/End: Original strand, 33167676 - 33167737
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatc 88  Q
    ||||||||||||||||||||  ||| |||||||||||||||||||||||| | |||||||||    
T  33167676 ttatttgcaatgaaataattaagtctaaattattaagaagataaaaatccaaccagccaatc 33167737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 43739490 - 43739555
Alignment:
Q  28 tatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaac 93  Q
    |||||||||||||||||||| ||||||| |||||||| ||||||||| | ||||||||||| ||||    
T  43739490 tatttgcaatgaaataattgagtccaaaatattaagatgataaaaattcaagcagccaatcgaaac 43739555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 88
Target Start/End: Original strand, 45363941 - 45364000
Alignment:
Q  29 atttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatc 88  Q
    |||||| |||||||||||| || ||||||||||||||||||||||||| ||||| |||||    
T  45363941 atttgctatgaaataattgagttcaaattattaagaagataaaaatccaagcagtcaatc 45364000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 71
Target Start/End: Complemental strand, 51156300 - 51156258
Alignment:
Q  29 atttgcaatgaaataattgggtccaaattattaagaagataaa 71  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  51156300 atttgcaatgaaataattgagtccaaattattaagaagataaa 51156258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 51523720 - 51523797
Alignment:
Q  28 tatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaacatgtcaagtgtc 105  Q
    |||||||||||||| ||||| || |||| |||||||| ||||||||||  |||||||||||  ||||||| |||||||    
T  51523720 tatttgcaatgaaaaaattgagtacaaaatattaagatgataaaaatcgaagcagccaatcgtaacatgttaagtgtc 51523797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 17675953 - 17675913
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaaga 67  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  17675953 ttatttgcaatgaaataattgagtccaaattattaagaaga 17675913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 74
Target Start/End: Original strand, 8471674 - 8471721
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaat 74  Q
    ||||||||||||||||||||| ||||||| |||||||| |||||||||    
T  8471674 ttatttgcaatgaaataattgagtccaaaatattaagatgataaaaat 8471721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 120 - 213
Target Start/End: Complemental strand, 48384581 - 48384487
Alignment:
Q  120 attcaacatgttgaattgtttcaacacttccctcctccaactcacttttttcc-catttcaacaccctcccctacaatggttcaacatgttgaat 213  Q
    ||||||| ||||||| | ||||| ||||||||||||||||||||  |||||||   ||||||||||||||  | ||| | |||||||||||||||    
T  48384581 attcaacttgttgaactctttcatcacttccctcctccaactcagatttttccttctttcaacaccctccattgcaaggcttcaacatgttgaat 48384487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 31160076 - 31160137
Alignment:
Q  102 tgtctccgtgggccaggcattcaacatgttgaattgtttcaacacttccctcctccaactca 163  Q
    |||||||||||||||  | |||||| ||||||||   |||||||||||||||||||||||||    
T  31160076 tgtctccgtgggccatcctttcaacttgttgaatccattcaacacttccctcctccaactca 31160137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 47296976 - 47296927
Alignment:
Q  165 ttttttcccatttcaacaccctcccctacaatggttcaacatgttgaatg 214  Q
    |||||||| |||||||||||| || |||||||| ||||||||||||||||    
T  47296976 ttttttccaatttcaacaccccccactacaatgattcaacatgttgaatg 47296927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 74
Target Start/End: Complemental strand, 3754656 - 3754612
Alignment:
Q  30 tttgcaatgaaataattgggtccaaattattaagaagataaaaat 74  Q
    |||||||||||||||||| || |||||| |||||| |||||||||    
T  3754656 tttgcaatgaaataattgagttcaaatttttaagatgataaaaat 3754612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 244
Target Start/End: Complemental strand, 45622942 - 45622906
Alignment:
Q  208 ttgaatggcaaattcaagatgccattgtaaatggtct 244  Q
    |||||||||||||| || |||||||||||||||||||    
T  45622942 ttgaatggcaaatttaacatgccattgtaaatggtct 45622906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 148; Significance: 3e-78; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 27 - 244
Target Start/End: Original strand, 4046585 - 4046811
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaacatgtcaagtgtctccgtgggccaggcattcaac 126  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||    
T  4046585 ttatttgcaatgaaataattcgatccaaattattaagaagataaaaatccgagcagccaatcaaaacatgccaagtgtctccgtggaccatgcattcaac 4046684  T
Q  127 atgttgaattgtttcaacacttccctcctccaactcacttttttcccatttcaacaccctcccctacaat-----------ggttcaacatgttgaatgg 215  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||           |||||||||||||||||||    
T  4046685 atgttgaattgtttcaacacttccctccttcaactcacttttttcccatttcaacacc--cccctacaatggttcaacaagggttcaacatgttgaatgg 4046782  T
Q  216 caaattcaagatgccattgtaaatggtct 244  Q
    ||||||||| || ||||||||||||||||    
T  4046783 caaattcaacataccattgtaaatggtct 4046811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 27 - 246
Target Start/End: Complemental strand, 51998847 - 51998620
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaacatgtcaagtgtctccgtgggccaggcattcaac 126  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||   |  | |||||||||||||||||||||||||||||    
T  51998847 ttatttgcaatgaaataattgggtccaaattattaagaagatcaaaatccgagcagccaatcagcgcgcgccaagtgtctccgtgggccaggcattcaac 51998748  T
Q  127 atgttgaattgtttcaacacttccctcctccaactcacttttttcccatttcaacaccctc--------ccctacaatggttcaacatgttgaatggcaa 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |          | |||| ||||||||||||||||||||||    
T  51998747 atgttgaattgtttcaacacttccctcctccaactcacttttttcccatttcatcaccccctacaatggttcaacaagggttcaacatgttgaatggcaa 51998648  T
Q  219 attcaagatgccattgtaaatggtctta 246  Q
    |||||| |||||||||||||||||||||    
T  51998647 attcaacatgccattgtaaatggtctta 51998620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 28 - 213
Target Start/End: Complemental strand, 37182680 - 37182497
Alignment:
Q  28 tatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaacatgtcaagtgtctccgtgggccaggcattcaaca 127  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |  | ||||||||||||||||||||||||||||||    
T  37182680 tatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcagcgcgcgccaagtgtctccgtgggccaggcattcaaca 37182581  T
Q  128 tgttgaattgtttcaacacttccctcctccaactcacttttttcccatttcaacaccctcccctacaatggt-tcaacatgttgaat 213  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||   ||||||||||||| ||||||||||||||    
T  37182580 tgttgaattgtttcaacactttcctcctccaactcacttttttcccatttcaacac---cccctacaatggtctcaacatgttgaat 37182497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 27 - 245
Target Start/End: Original strand, 50734483 - 50734713
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaacatgtcaagtgtctccgtgggccaggcattcaac 126  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||   |  |  |||| ||||| |||||||| ||||||||    
T  50734483 ttatttgcaataaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcagcgcgcgctaagtatctccatgggccagacattcaac 50734582  T
Q  127 atgttgaattgtttcaacacttccctcctccaactcacttttttcccatttcaacacc-ctcccctacaat-----------ggttcaacatgttgaatg 214  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | | ||||||||           ||||||||||||||||||    
T  50734583 atgttgaattgtttcaacacttccctcctccaactcactttttccccatttcaacacctcccacctacaatggttcaacaaaggttcaacatgttgaatg 50734682  T
Q  215 gcaaattcaagatgccattgtaaatggtctt 245  Q
    |||||||||| |||| |||||||||||||||    
T  50734683 gcaaattcaacatgctattgtaaatggtctt 50734713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 27 - 245
Target Start/End: Complemental strand, 50778372 - 50778142
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaacatgtcaagtgtctccgtgggccaggcattcaac 126  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||   |  |  |||| ||||| |||||||| ||||||||    
T  50778372 ttatttgcaataaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcagcgcgcgctaagtatctccatgggccagacattcaac 50778273  T
Q  127 atgttgaattgtttcaacacttccctcctccaactcacttttttcccatttcaacacc-ctcccctacaat-----------ggttcaacatgttgaatg 214  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | | ||||||||           ||||||||||||||||||    
T  50778272 atgttgaattgtttcaacacttccctcctccaactcactttttccccatttcaacacctcccacctacaatggttcaacaaaggttcaacatgttgaatg 50778173  T
Q  215 gcaaattcaagatgccattgtaaatggtctt 245  Q
    |||||||||| |||| |||||||||||||||    
T  50778172 gcaaattcaacatgctattgtaaatggtctt 50778142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 27 - 234
Target Start/End: Original strand, 29702122 - 29702329
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaacatgtcaagtgtctccgtgggccaggcattcaac 126  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||  |||||||| || ||||||    
T  29702122 ttatttgcaataaaataattgagtccaaattattaagaagataaaaatccaagcatccaatcaaaacatgccaagtgtctatgtgggccatgctttcaac 29702221  T
Q  127 atgttgaattgtttcaacacttccctcctccaactcacttttttcccatttcaacaccctcccctacaatggttcaacatgttgaatggcaaattcaaga 226  Q
    ||||||||||  |||||||| || |||||||||||||  ||||||||| ||||||| |  ||||||||||||||||||||||||||| |||||||||| |    
T  29702222 atgttgaatttgttcaacacctctctcctccaactcatatttttcccaattcaacaactccccctacaatggttcaacatgttgaattgcaaattcaaca 29702321  T
Q  227 tgccattg 234  Q
    | ||||||    
T  29702322 tcccattg 29702329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 30 - 234
Target Start/End: Original strand, 41183730 - 41183931
Alignment:
Q  30 tttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaacatgtcaagtgtctccgtgggccaggcattcaacatg 129  Q
    |||||||||||||||||| |||||||||||| ||||||||||||| | || |||||||||||||||||||| |||||| |||| |||||| |||||||||    
T  41183730 tttgcaatgaaataattgagtccaaattattgagaagataaaaattcaaggagccaatcaaaacatgtcaaatgtctctgtggaccaggctttcaacatg 41183829  T
Q  130 ttgaattgtttcaacacttccctcctccaactcacttttttcccatttcaacaccctcccctacaatggttcaacatgttgaatggcaaattcaagatgc 229  Q
    |||||||  |||||||| || |||||||||||||  ||||| ||| |||| ||    ||||| ||||||||||||| ||||||| |||||||||| || |    
T  41183830 ttgaatttattcaacacctctctcctccaactcatattttttccaattcatca---acccctgcaatggttcaacacgttgaattgcaaattcaacatcc 41183926  T
Q  230 cattg 234  Q
    |||||    
T  41183927 cattg 41183931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 42564411 - 42564489
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaacatgtcaagtgtc 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || |||||    
T  42564411 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccaagcagccaatcaaaacatgccatgtgtc 42564489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 33187715 - 33187638
Alignment:
Q  28 tatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaacatgtcaagtgtc 105  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  33187715 tatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatcaaaacatgccaagtgtc 33187638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 27 - 105
Target Start/End: Complemental strand, 4873774 - 4873696
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaacatgtcaagtgtc 105  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  4873774 ttatttacaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatcaaaacatgccaagtgtc 4873696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 32120041 - 32119979
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatca 89  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  32120041 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccaagcagccaatca 32119979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 6044936 - 6044874
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatca 89  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  6044936 ttatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatca 6044874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 44084774 - 44084836
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatca 89  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  44084774 ttatttgcaatgaaataattggttccaaattattaagaagataaaaatccaagcagccaatca 44084836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 27 - 88
Target Start/End: Original strand, 12975290 - 12975351
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatc 88  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  12975290 ttatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatc 12975351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 29 - 105
Target Start/End: Original strand, 6833081 - 6833157
Alignment:
Q  29 atttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaacatgtcaagtgtc 105  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||  |||||| || |||||    
T  6833081 atttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacatgccacgtgtc 6833157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 27 - 134
Target Start/End: Complemental strand, 36178089 - 36177982
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaacatgtcaagtgtctccgtgggccaggcattcaac 126  Q
    |||||||| || ||||||||| |||||||||||||||||||||||||||| |||||||||||  |||| | ||  |||| | ||||| ||||| ||||||    
T  36178089 ttatttgctataaaataattgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacatgtcactgtgggtcaggctttcaac 36177990  T
Q  127 atgttgaa 134  Q
    ||||||||    
T  36177989 atgttgaa 36177982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 51305024 - 51305131
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaacatgtcaagtgtctccgtgggccaggcattcaac 126  Q
    |||||||| |||||||||||| ||||||||||||||||| |||||||||| |||||||||||  |||| |||| ||||| | |  | |||||| ||||||    
T  51305024 ttatttgctatgaaataattgagtccaaattattaagaaaataaaaatccaagcagccaatcgtaacaagtcacgtgtcactgcagaccaggctttcaac 51305123  T
Q  127 atgttgaa 134  Q
    ||||||||    
T  51305124 atgttgaa 51305131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 10424266 - 10424204
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatca 89  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  10424266 ttattttcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatca 10424204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 11908499 - 11908556
Alignment:
Q  29 atttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaa 86  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  11908499 atttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaa 11908556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 88
Target Start/End: Complemental strand, 48886439 - 48886378
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatc 88  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||||||    
T  48886439 ttatttgcaatgaaataatcgagtccaaattattaagaagataaaaatccaagcagccaatc 48886378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 88
Target Start/End: Complemental strand, 51999679 - 51999618
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatc 88  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  51999679 ttatttgctatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatc 51999618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 27 - 76
Target Start/End: Complemental strand, 49027030 - 49026981
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatcc 76  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  49027030 ttatttgcaatgaaataattgagtccaaattattaagaagataaaaatcc 49026981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 91
Target Start/End: Original strand, 7008576 - 7008640
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaa 91  Q
    ||||||| ||||||||||||| ||||||| |||||||| ||||||||||| ||||||||||||||    
T  7008576 ttatttgtaatgaaataattgagtccaaaatattaagatgataaaaatccaagcagccaatcaaa 7008640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 20140024 - 20140084
Alignment:
Q  28 tatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatc 88  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||| |||||| ||||    
T  20140024 tatttgcaatgaaataattgagtctaaattattaagaagataaaaatccaagcagcgaatc 20140084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 31169883 - 31169823
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaat 87  Q
    |||||| |||||||||||| | |||||||||||||||||||||||||||| ||||||||||    
T  31169883 ttatttacaatgaaataatagagtccaaattattaagaagataaaaatccaagcagccaat 31169823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 35471928 - 35471868
Alignment:
Q  29 atttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatca 89  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||   ||||||||||    
T  35471928 atttgcaatgaaataattgagtccaaattattaagaagataaaaatccagccagccaatca 35471868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 76
Target Start/End: Complemental strand, 50415410 - 50415362
Alignment:
Q  28 tatttgcaatgaaataattgggtccaaattattaagaagataaaaatcc 76  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  50415410 tatttgcaatgaaataattgagtccaaattattaagaagataaaaatcc 50415362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 26162149 - 26162103
Alignment:
Q  29 atttgcaatgaaataattgggtccaaattattaagaagataaaaatc 75  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||    
T  26162149 atttgcaatgaaataattgagtccaaattattaagaagataaaaatc 26162103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 105
Target Start/End: Complemental strand, 46136885 - 46136807
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaacatgtcaagtgtc 105  Q
    ||||||||||||||||||||| ||||||| |||||||| ||||||||||  ||||  |||||  |||||||||||||||    
T  46136885 ttatttgcaatgaaataattgagtccaaaatattaagatgataaaaatcaaagcaatcaatcgtaacatgtcaagtgtc 46136807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 27 - 76
Target Start/End: Complemental strand, 30415064 - 30415015
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatcc 76  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  30415064 ttatttgcaatgaaataattgagtccaaagtattaagaagataaaaatcc 30415015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 27 - 88
Target Start/End: Original strand, 55027223 - 55027284
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatc 88  Q
    ||||||||||||||||||||| ||| ||| |||||||| ||||||||||| |||||||||||    
T  55027223 ttatttgcaatgaaataattgagtctaaaatattaagatgataaaaatccaagcagccaatc 55027284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 105
Target Start/End: Complemental strand, 35540177 - 35540099
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaacatgtcaagtgtc 105  Q
    ||||||||||||||||||||| ||||||| |||| ||| ||||| ||||  |||||||||||  |||||| ||||||||    
T  35540177 ttatttgcaatgaaataattgagtccaaaatattgagatgataagaatcgaagcagccaatcgtaacatgccaagtgtc 35540099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 76
Target Start/End: Original strand, 27848050 - 27848099
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatcc 76  Q
    ||||||||||||||||||||| ||| ||| ||||||||||||||||||||    
T  27848050 ttatttgcaatgaaataattgagtctaaagtattaagaagataaaaatcc 27848099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 86
Target Start/End: Complemental strand, 38571757 - 38571700
Alignment:
Q  29 atttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaa 86  Q
    ||||||||| ||||||||| ||||||| |||||||| ||||||||||| |||||||||    
T  38571757 atttgcaataaaataattgagtccaaaatattaagatgataaaaatccaagcagccaa 38571700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 43475880 - 43475945
Alignment:
Q  28 tatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaac 93  Q
    |||||||||| ||||||||| ||| ||| |||||||| ||||||||||| ||||||||||| ||||    
T  43475880 tatttgcaataaaataattgagtctaaaatattaagatgataaaaatccaagcagccaatcgaaac 43475945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 33795136 - 33795084
Alignment:
Q  37 tgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatca 89  Q
    ||||||||||||||  |||||||||||| ||||||||||||| ||||||||||    
T  33795136 tgaaataattgggttgaaattattaagatgataaaaatccgaacagccaatca 33795084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 75
Target Start/End: Complemental strand, 49406942 - 49406894
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatc 75  Q
    ||||||||||||||||||||| || ||||||||||||| ||||||||||    
T  49406942 ttatttgcaatgaaataattgagttcaaattattaagatgataaaaatc 49406894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 236
Target Start/End: Complemental strand, 4873520 - 4873449
Alignment:
Q  165 ttttttcccatttcaacaccctcccctacaatggttcaacatgttgaatggcaaattcaagatgccattgta 236  Q
    |||||| | |||||||||||| || |||||||| |||||||||||||||||||  ||||| | |||||||||    
T  4873520 tttttttcaatttcaacaccccccactacaatgattcaacatgttgaatggcactttcaacaagccattgta 4873449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 120 - 213
Target Start/End: Complemental strand, 6044735 - 6044641
Alignment:
Q  120 attcaacatgttgaattgtttcaacacttccctcctccaactcacttttttcc-catttcaacaccctcccctacaatggttcaacatgttgaat 213  Q
    ||||||| ||||||| | ||||| ||||||||||||||||||||  |||||||   ||||||||||||||  | ||| | |||||||||||||||    
T  6044735 attcaacttgttgaactctttcatcacttccctcctccaactcagatttttccttctttcaacaccctccattgcaaggcttcaacatgttgaat 6044641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 27 - 93
Target Start/End: Original strand, 15007654 - 15007720
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaac 93  Q
    ||||||||||||||||||||| ||||||| |||| ||| |||||||||   ||||||||||| ||||    
T  15007654 ttatttgcaatgaaataattgagtccaaaatatttagatgataaaaattgaagcagccaatcgaaac 15007720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 172
Target Start/End: Original strand, 42564605 - 42564667
Alignment:
Q  110 tgggccaggcattcaacatgttgaattgtttcaacacttccctcctccaactcacttttttcc 172  Q
    |||||||||| ||||||  |||||||   |||||||||||||||||||||||||  |||||||    
T  42564605 tgggccaggctttcaactagttgaatccattcaacacttccctcctccaactcagatttttcc 42564667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 10381165 - 10381108
Alignment:
Q  115 caggcattcaacatgttgaattgtttcaacacttccctcctccaactcacttttttcc 172  Q
    ||||||||||||  |||||| | ||||| ||||||||||||||||||||  |||||||    
T  10381165 caggcattcaactagttgaactctttcatcacttccctcctccaactcagatttttcc 10381108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 15493385 - 15493340
Alignment:
Q  29 atttgcaatgaaataattgggtccaaattattaagaagataaaaat 74  Q
    ||||||||||||||||||| || ||||||||||| | |||||||||    
T  15493385 atttgcaatgaaataattgagttcaaattattaaaatgataaaaat 15493340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 74
Target Start/End: Complemental strand, 46572562 - 46572518
Alignment:
Q  30 tttgcaatgaaataattgggtccaaattattaagaagataaaaat 74  Q
    |||||||||||||||||| || ||||||||||||| || ||||||    
T  46572562 tttgcaatgaaataattgagttcaaattattaagatgacaaaaat 46572518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 73
Target Start/End: Complemental strand, 47700543 - 47700499
Alignment:
Q  29 atttgcaatgaaataattgggtccaaattattaagaagataaaaa 73  Q
    ||||||||||||||||||| ||  |||||||||||| ||||||||    
T  47700543 atttgcaatgaaataattgagtttaaattattaagatgataaaaa 47700499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 144; Significance: 8e-76; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 27 - 244
Target Start/End: Complemental strand, 45100629 - 45100400
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaacatgtcaagtgtctccgtgggccaggcattcaac 126  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |  | |||||||||||||||||||||||||||||    
T  45100629 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcagcgcgcgccaagtgtctccgtgggccaggcattcaac 45100530  T
Q  127 atgttgaattgtttcaacacttccctcctccaactcacttttttcccatttcaacaccctcc-cct-----------acaatggttcaacatgttgaatg 214  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || |||           |||| ||||||||||||||||||    
T  45100529 atgttgaattgtttcaacacttccctcctccaactcactttttccccatttcaacaccccccacctacgatggttcaacaagggttcaacatgttgaatg 45100430  T
Q  215 gcaaattcaagatgccattgtaaatggtct 244  Q
    |||||||||| |||||||||||||||||||    
T  45100429 gcaaattcaacatgccattgtaaatggtct 45100400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 27 - 166
Target Start/End: Original strand, 42860384 - 42860525
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaa--tccgagcagccaatcaaaacatgtcaagtgtctccgtgggccaggcattca 124  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||   |  | |||||||||||||||||||||||||||    
T  42860384 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaaaattcgagcagccaatcagcgcgcgccaagtgtctccgtgggccaggcattca 42860483  T
Q  125 acatgttgaattgtttcaacacttccctcctccaactcactt 166  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  42860484 acatgttgaattgtttcaacacttccctcctccaactcactt 42860525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 15057048 - 15057126
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaacatgtcaagtgtc 105  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  15057048 ttatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatcaaaacatgccaagtgtc 15057126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 103 - 234
Target Start/End: Original strand, 15057235 - 15057364
Alignment:
Q  103 gtctccgtgggccaggcattcaacatgttgaattgtttcaacacttccctcctccaactcacttttttcccatttcaacaccctcccctacaatggttca 202  Q
    ||||| ||||||||| | ||||||||||||||||  |||||||| || |||||||||||||  ||||||||| ||||||| |  ||||||||||||||||    
T  15057235 gtctctgtgggccagactttcaacatgttgaatttgttcaacacatctctcctccaactcagatttttcccaattcaacaac--cccctacaatggttca 15057332  T
Q  203 acatgttgaatggcaaattcaagatgccattg 234  Q
    ||||||||||| |||||||||| || ||||||    
T  15057333 acatgttgaattgcaaattcaacattccattg 15057364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 156
Target Start/End: Original strand, 26245092 - 26245221
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaacatgtcaagtgtctccgtgggccaggcattcaac 126  Q
    |||||||| |||||||||||| ||||||||||||||||| |||||||||| |||||||||||  |||| | || ||||| | | ||||||||| ||||||    
T  26245092 ttatttgctatgaaataattgagtccaaattattaagaaaataaaaatccaagcagccaatcgtaacaagccacgtgtcactgcgggccaggctttcaac 26245191  T
Q  127 atgttgaattgtttcaacacttccctcctc 156  Q
    ||||||||   ||||||||| || ||||||    
T  26245192 atgttgaaccttttcaacacctctctcctc 26245221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 27 - 156
Target Start/End: Original strand, 40284069 - 40284198
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaacatgtcaagtgtctccgtgggccaggcattcaac 126  Q
    |||||||| |||||||||||| ||||||||||||||||| |||||||||| |||||||||||  |||| | || ||||| | | ||||||| | ||||||    
T  40284069 ttatttgctatgaaataattgagtccaaattattaagaaaataaaaatccaagcagccaatcgtaacaagccacgtgtcactgcgggccagactttcaac 40284168  T
Q  127 atgttgaattgtttcaacacttccctcctc 156  Q
    ||||||||   ||||||||| || ||||||    
T  40284169 atgttgaaccttttcaacacctctctcctc 40284198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 27 - 88
Target Start/End: Original strand, 44503730 - 44503791
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatc 88  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  44503730 ttatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatc 44503791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 44150349 - 44150409
Alignment:
Q  29 atttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatca 89  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  44150349 atttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatca 44150409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 29732149 - 29732209
Alignment:
Q  29 atttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatca 89  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||    
T  29732149 atttgcaatgaaataattgagtccaaattattaagaagataaaaatccaaacagccaatca 29732209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 38204880 - 38204818
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatca 89  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| |  |||||||||    
T  38204880 ttatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaacgagccaatca 38204818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 31 - 88
Target Start/End: Complemental strand, 31129060 - 31129003
Alignment:
Q  31 ttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatc 88  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||    
T  31129060 ttgcaatgaaataattgagtccaaattattaagatgataaaaatccaagcagccaatc 31129003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 29 - 76
Target Start/End: Complemental strand, 1633024 - 1632977
Alignment:
Q  29 atttgcaatgaaataattgggtccaaattattaagaagataaaaatcc 76  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  1633024 atttgcaatgaaataattgagtccaaattattaagaagataaaaatcc 1632977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 29 - 88
Target Start/End: Original strand, 23550210 - 23550269
Alignment:
Q  29 atttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatc 88  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||| | |||||||||||    
T  23550210 atttgcaatgaaataattgagtctaaattattaagaagataaaaattcaagcagccaatc 23550269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 98
Target Start/End: Complemental strand, 7511367 - 7511297
Alignment:
Q  28 tatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaacatgtc 98  Q
    |||||||||||||||||||| ||||||| |||||||| ||||||||||| || |||||||| |||| ||||    
T  7511367 tatttgcaatgaaataattgagtccaaaatattaagatgataaaaatccaagtagccaatcgaaacgtgtc 7511297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 93
Target Start/End: Original strand, 13497730 - 13497796
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaac 93  Q
    ||||||||||||||||||||| ||||| | |||||||| ||||||||||| ||||||||||| ||||    
T  13497730 ttatttgcaatgaaataattgagtccagaatattaagatgataaaaatccaagcagccaatcgaaac 13497796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 13783799 - 13783737
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatca 89  Q
    ||||||||||||||||||||   ||||||||||||||||||||||||||| | ||||||||||    
T  13783799 ttatttgcaatgaaataatttaatccaaattattaagaagataaaaatccaaccagccaatca 13783737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 27 - 76
Target Start/End: Complemental strand, 1954859 - 1954810
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatcc 76  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  1954859 ttatttgcaatgaaataattgagtccaaagtattaagaagataaaaatcc 1954810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 27 - 88
Target Start/End: Original strand, 13947898 - 13947959
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatc 88  Q
    |||||||  |||||||||||| |||||||||||||||||||||||||||| || ||||||||    
T  13947898 ttatttgttatgaaataattgagtccaaattattaagaagataaaaatccaagtagccaatc 13947959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 43523874 - 43523822
Alignment:
Q  29 atttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagca 81  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||| ||||    
T  43523874 atttgcaatgaaataattgagtccaaattattaagaaaataaaaatccaagca 43523822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 30529262 - 30529203
Alignment:
Q  28 tatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaat 87  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||| | ||||| ||||    
T  30529262 tatttgcaatgaaataattgagtccaaattatttagaagataaaaattcaagcagtcaat 30529203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 74
Target Start/End: Original strand, 35932322 - 35932369
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaat 74  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  35932322 ttatttgcaatgaaataattgagtccaaagtattaagaagataaaaat 35932369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 12272070 - 12272010
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaat 87  Q
    ||||||||||||||||||||| ||| ||| |||||||| ||||||||||| ||||| ||||    
T  12272070 ttatttgcaatgaaataattgagtctaaaatattaagatgataaaaatccaagcagtcaat 12272010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 182
Target Start/End: Complemental strand, 43524716 - 43524638
Alignment:
Q  103 gtctccgtgggccaggcattcaacatgttgaattgtttcaacacttccctcctccaactcacttttttcccatttcaaca 182  Q
    ||||| ||||||||| | || ||||||||||| |  |||||||| || ||||||||||||| ||||||||||||||||||    
T  43524716 gtctctgtgggccag-ctttaaacatgttgaacttgttcaacacctctctcctccaactcagttttttcccatttcaaca 43524638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 192 - 234
Target Start/End: Original strand, 42860554 - 42860596
Alignment:
Q  192 acaatggttcaacatgttgaatggcaaattcaagatgccattg 234  Q
    |||| |||||||||||||||||||||||||||| |||||||||    
T  42860554 acaagggttcaacatgttgaatggcaaattcaacatgccattg 42860596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 199 - 234
Target Start/End: Complemental strand, 43524644 - 43524609
Alignment:
Q  199 ttcaacatgttgaatggcaaattcaagatgccattg 234  Q
    |||||||||||||||||||||||||| |||||||||    
T  43524644 ttcaacatgttgaatggcaaattcaacatgccattg 43524609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 17494182 - 17494136
Alignment:
Q  29 atttgcaatgaaataattgggtccaaattattaagaagataaaaatc 75  Q
    ||||||||||||||||||| || ||||||||||||| || |||||||    
T  17494182 atttgcaatgaaataattgagttcaaattattaagatgagaaaaatc 17494136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 143; Significance: 3e-75; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 27 - 240
Target Start/End: Original strand, 52773353 - 52773576
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaacatgtcaagtgtctccgtgggccaggcattcaac 126  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||  ||||||||||||||||||    
T  52773353 ttatttgcaatgaaataattaggtccaaattattaagaagataaaaattcgagcagccaatcaaaacatgccaagtgtctatgtgggccaggcattcaac 52773452  T
Q  127 atgttgaattgtttcaacacttccctcctccaactcacttttttcccatttcaacaccctcccctacaat-----------ggttcaacatgttgaatgg 215  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||| || || ||||||||||           |||||||||||||||||||    
T  52773453 atgttgaattgtttcaacacttccctcctccaactcactttttttccatttcagcaacc-cccctacaatagttcaagaagggttcaacatgttgaatgg 52773551  T
Q  216 caaattcaagatgccattgtaaatg 240  Q
    ||||||||| |||||||||||||||    
T  52773552 caaattcaacatgccattgtaaatg 52773576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 27 - 242
Target Start/End: Complemental strand, 55549663 - 55549436
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaacatgtcaagtgtctccgtgggccaggcattcaac 126  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||  || | |||||||||||||||||||| ||||||||    
T  55549663 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaattcgagcagtcaatcaacgcacgccaagtgtctccgtgggccagacattcaac 55549564  T
Q  127 atgttgaattgtttcaacacttccctcctccaactcacttttttcccatttcaacaccctcc-cctacaat-----------ggttcaacatgttgaatg 214  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| || ||||||||           ||||||||||||||||||    
T  55549563 atgttgaattgtttcaacaattccctcctccaactcactttttccccatttcaacaccccccacctacaatggttcaacaagggttcaacatgttgaatg 55549464  T
Q  215 gcaaattcaagatgccattgtaaatggt 242  Q
    |||||||||| |||||||||||||||||    
T  55549463 gcaaattcaacatgccattgtaaatggt 55549436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 27 - 234
Target Start/End: Original strand, 38174003 - 38174209
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaacatgtcaagtgtctccgtgggccaggcattcaac 126  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||| |||||||| || ||||||    
T  38174003 ttatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagtcaatcaaaacatgtcaggtgtctctgtgggccaagctttcaac 38174102  T
Q  127 atgttgaattgtttcaacacttccctcctccaactcacttttttcccatttcaacaccctcccctacaatggttcaacatgttgaatggcaaattcaaga 226  Q
    ||||||||||  |||||||| || |||||||||||||  ||||||||| ||||||| ||  |||||||||||||||||||||||||| |||||||||| |    
T  38174103 atgttgaatttgttcaacacctctctcctccaactcatatttttcccaattcaacaacc-accctacaatggttcaacatgttgaattgcaaattcaaca 38174201  T
Q  227 tgccattg 234  Q
    | ||||||    
T  38174202 ttccattg 38174209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 27 - 246
Target Start/End: Original strand, 16021308 - 16021526
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaacatgtcaagtgtctccgtgggccaggcattcaac 126  Q
    ||||||||||| |||||||||||| ||||||||||| ||||||||||||| ||||| ||||||   |  | |||||||||| ||||||||||||||||||    
T  16021308 ttatttgcaataaaataattgggttcaaattattaaaaagataaaaatccaagcagtcaatcagcgcgcgccaagtgtctctgtgggccaggcattcaac 16021407  T
Q  127 atgttgaattgtttcaacacttccctcctccaactcacttttttcccatttcaacaccctcccctacaatggt-tcaacatgttgaatggcaaattcaag 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||     ||||||     
T  16021408 atgttgaattgtttcaacacttccctcctccaactcacttttttcccatttcaacacc--cccctacaatggtctcaacatgttgaatatggcattcaac 16021505  T
Q  226 atgccattgtaaatggtctta 246  Q
    | |||||||||| ||||||||    
T  16021506 aagccattgtaagtggtctta 16021526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 27 - 234
Target Start/End: Original strand, 52018110 - 52018313
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaacatgtcaagtgtctccgtgggccaggcattcaac 126  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||| | ||||||||||||||||||| |||||||||  ||||||||||| ||||||    
T  52018110 ttatttgcaatgaaataattgagtccaaattattgagaagataaaaattcaagcagccaatcaaaacatgccaagtgtct--gtgggccaggctttcaac 52018207  T
Q  127 atgttgaattgtttcaacacttccctcctccaactcacttttttcccatttcaacaccctcccctacaatggttcaacatgttgaatggcaaattcaaga 226  Q
    ||||||||||  |||||||| || |||||||||||||  ||||||||| ||||||| |  ||||||||||||||||||||||||||| |||||||||| |    
T  52018208 atgttgaatttgttcaacacctctctcctccaactcatatttttcccaattcaacaac--cccctacaatggttcaacatgttgaattgcaaattcaaca 52018305  T
Q  227 tgccattg 234  Q
    | ||||||    
T  52018306 tcccattg 52018313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 27 - 105
Target Start/End: Complemental strand, 33077475 - 33077397
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaacatgtcaagtgtc 105  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  33077475 ttatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatcaaaacatgccaagtgtc 33077397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 114 - 234
Target Start/End: Complemental strand, 33077296 - 33077179
Alignment:
Q  114 ccaggcattcaacatgttgaattgtttcaacacttccctcctccaactcacttttttcccatttcaacaccctcccctacaatggttcaacatgttgaat 213  Q
    ||||||||| |||||||| || |  |||||||| || ||||||||||||| |||||||| ||||||||||||   ||||||||| |||||||||||||||    
T  33077296 ccaggcattaaacatgttaaacttgttcaacacatctctcctccaactcagttttttcctatttcaacaccc---cctacaatgattcaacatgttgaat 33077200  T
Q  214 ggcaaattcaagatgccattg 234  Q
    ||||||||||| ||| |||||    
T  33077199 ggcaaattcaacatgtcattg 33077179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 156
Target Start/End: Original strand, 27864372 - 27864501
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaacatgtcaagtgtctccgtgggccaggcattcaac 126  Q
    |||||||| |||||||||||| ||||||||||||||||| |||||||| | |||||||||||  |||| |||| ||||| | | ||||||||| ||||||    
T  27864372 ttatttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatcgtaacaagtcatgtgtcactgcgggccaggctttcaac 27864471  T
Q  127 atgttgaattgtttcaacacttccctcctc 156  Q
    ||||||||   ||||||||| || ||||||    
T  27864472 atgttgaaccttttcaacacctctctcctc 27864501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 3529864 - 3529802
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatca 89  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  3529864 ttatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatca 3529802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 8995221 - 8995283
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatca 89  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  8995221 ttatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatca 8995283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 34198862 - 34198800
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatca 89  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  34198862 ttatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatca 34198800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 40721472 - 40721534
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatca 89  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  40721472 ttatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatca 40721534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 27 - 106
Target Start/End: Original strand, 13113989 - 13114065
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaacatgtcaagtgtct 106  Q
    ||||||||||||||||||||||||||||||||||   ||||||||||||| ||||||||||||||||||| || ||||||    
T  13113989 ttatttgcaatgaaataattgggtccaaattatt---aagataaaaatccaagcagccaatcaaaacatgccatgtgtct 13114065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 27 - 156
Target Start/End: Original strand, 19273377 - 19273506
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaacatgtcaagtgtctccgtgggccaggcattcaac 126  Q
    |||||||| |||||||||||| ||||||||||||||||| |||||||||| |||||||||||  ||||   || ||||| | | ||||||||| ||||||    
T  19273377 ttatttgctatgaaataattgagtccaaattattaagaaaataaaaatccaagcagccaatcgtaacaaaccacgtgtcactgcgggccaggctttcaac 19273476  T
Q  127 atgttgaattgtttcaacacttccctcctc 156  Q
    ||||||||   ||||||||| || ||||||    
T  19273477 atgttgaaccttttcaacacctctctcctc 19273506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 27 - 156
Target Start/End: Original strand, 35809855 - 35809984
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaacatgtcaagtgtctccgtgggccaggcattcaac 126  Q
    |||||||| |||||||||||| ||||||||||||||||| |||||||||| |||||||||||  |||| | || ||||| | |  |||||||| ||||||    
T  35809855 ttatttgctatgaaataattgagtccaaattattaagaaaataaaaatccaagcagccaatcgtaacaagccacgtgtcactgcaggccaggctttcaac 35809954  T
Q  127 atgttgaattgtttcaacacttccctcctc 156  Q
    ||||||||   ||||||||| || ||||||    
T  35809955 atgttgaaccttttcaacacctctctcctc 35809984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 33609420 - 33609480
Alignment:
Q  28 tatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatc 88  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  33609420 tatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatc 33609480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 34463147 - 34463085
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatca 89  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||    
T  34463147 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatcgaaacagccaatca 34463085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 88
Target Start/End: Original strand, 33523841 - 33523902
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatc 88  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| | |||||||||    
T  33523841 ttatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaaacagccaatc 33523902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 88
Target Start/End: Complemental strand, 48403517 - 48403456
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatc 88  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  48403517 ttatttgctatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatc 48403456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 88
Target Start/End: Complemental strand, 53347305 - 53347244
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatc 88  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||||||    
T  53347305 ttatttgcaatgaaataattgagtccaaattattaagaagataaaaattcaagcagccaatc 53347244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 103 - 185
Target Start/End: Original strand, 13114102 - 13114181
Alignment:
Q  103 gtctccgtgggccaggcattcaacatgttgaattgtttcaacacttccctcctccaactcacttttttcccatttcaacaccc 185  Q
    ||||| ||||||||||| ||||||||||||||||| ||||||||||| ||||||||||    |||||||||||||||||||||    
T  13114102 gtctctgtgggccaggctttcaacatgttgaattgattcaacacttctctcctccaac---gttttttcccatttcaacaccc 13114181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 18468967 - 18468907
Alignment:
Q  29 atttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatca 89  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  18468967 attttcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatca 18468907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 16171507 - 16171445
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatca 89  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||   ||||||||||    
T  16171507 ttatttgcaatgaaataattgagtccaaattattaagaagataaaaatccagccagccaatca 16171445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 23389576 - 23389514
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatca 89  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||| ||||||    
T  23389576 ttatttgcaatgaaataattgagtccaaataattaagaagataaaaatccaagcagtcaatca 23389514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 27 - 88
Target Start/End: Original strand, 56054708 - 56054769
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatc 88  Q
    ||||||||||||||||||||| ||||||| |||||||| ||||||||||| |||||||||||    
T  56054708 ttatttgcaatgaaataattgagtccaaaatattaagatgataaaaatccaagcagccaatc 56054769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 93
Target Start/End: Original strand, 28901575 - 28901641
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaac 93  Q
    ||||||||||||||||||||| || |||| |||||||| ||||||||||| ||||||||||| ||||    
T  28901575 ttatttgcaatgaaataattgagtgcaaaatattaagatgataaaaatccaagcagccaatcgaaac 28901641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 27 - 76
Target Start/End: Complemental strand, 3614853 - 3614804
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatcc 76  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  3614853 ttatttgcaatgaaataattgagtccaaagtattaagaagataaaaatcc 3614804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 27 - 156
Target Start/End: Complemental strand, 13093778 - 13093649
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaacatgtcaagtgtctccgtgggccaggcattcaac 126  Q
    |||||||| ||||||||||||  |||||||||||||||| |||||||||| | |||||||||  |||| | || ||||| | | ||||||  | ||||||    
T  13093778 ttatttgctatgaaataattgaatccaaattattaagaaaataaaaatccaaacagccaatcgtaacaagccacgtgtcactgcgggccatactttcaac 13093679  T
Q  127 atgttgaattgtttcaacacttccctcctc 156  Q
    ||||||||   ||||||||| || ||||||    
T  13093678 atgttgaaccttttcaacacctctctcctc 13093649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 27 - 88
Target Start/End: Complemental strand, 48506205 - 48506144
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatc 88  Q
    ||||||||||||||||||||| ||| ||| |||||||| ||||||||||| |||||||||||    
T  48506205 ttatttgcaatgaaataattgagtctaaaatattaagatgataaaaatccaagcagccaatc 48506144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 23539282 - 23539222
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaat 87  Q
    ||||||||||||||||||||| ||||||| |||||||| ||||||||||  ||||||||||    
T  23539282 ttatttgcaatgaaataattgagtccaaaatattaagatgataaaaatctaagcagccaat 23539222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 4982121 - 4982167
Alignment:
Q  29 atttgcaatgaaataattgggtccaaattattaagaagataaaaatc 75  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||    
T  4982121 atttgcaatgaaataattgaatccaaattattaagaagataaaaatc 4982167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 28447683 - 28447761
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaacatgtcaagtgtc 105  Q
    ||||||||||||||||||||| ||||||| ||||||||  |||||||||  |||||||||||  |||||| ||| ||||    
T  28447683 ttatttgcaatgaaataattgagtccaaagtattaagataataaaaatcgaagcagccaatcgtaacatgccaaatgtc 28447761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 93
Target Start/End: Complemental strand, 31336147 - 31336081
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaac 93  Q
    ||||||||||||||||||||| ||||||| |||||| | ||||||||| | ||||||||||| ||||    
T  31336147 ttatttgcaatgaaataattgagtccaaaatattaaaatgataaaaattcaagcagccaatcgaaac 31336081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 105
Target Start/End: Complemental strand, 34434160 - 34434082
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaacatgtcaagtgtc 105  Q
    |||||| |||||||||||||| ||||||| ||||||||  |||||||||  |||||||||||  |||||| ||||||||    
T  34434160 ttattttcaatgaaataattgagtccaaaatattaagataataaaaatctaagcagccaatcgtaacatgccaagtgtc 34434082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 76
Target Start/End: Complemental strand, 17329509 - 17329468
Alignment:
Q  35 aatgaaataattgggtccaaattattaagaagataaaaatcc 76  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  17329509 aatgaaataattgagtccaaattattaagaagataaaaatcc 17329468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 120 - 213
Target Start/End: Original strand, 8995422 - 8995516
Alignment:
Q  120 attcaacatgttgaattgtttcaacacttccctcctccaactcacttttttcc-catttcaacaccctcccctacaatggttcaacatgttgaat 213  Q
    ||||||| ||||||| | ||||| ||||||||||||||||||||  |||||||   ||||||||||||||  | ||| | |||||||||||||||    
T  8995422 attcaacttgttgaactctttcatcacttccctcctccaactcagatttttccttctttcaacaccctccattgcaaggcttcaacatgttgaat 8995516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 34198664 - 34198607
Alignment:
Q  115 caggcattcaacatgttgaattgtttcaacacttccctcctccaactcacttttttcc 172  Q
    ||||||||||||  ||||||||  |||||||||||||||||||||||||  |||||||    
T  34198664 caggcattcaactagttgaattcattcaacacttccctcctccaactcagatttttcc 34198607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 40721670 - 40721727
Alignment:
Q  115 caggcattcaacatgttgaattgtttcaacacttccctcctccaactcacttttttcc 172  Q
    ||||||||||||  ||||||||  |||||||||||||||||||||||||  |||||||    
T  40721670 caggcattcaactagttgaattcattcaacacttccctcctccaactcagatttttcc 40721727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 102 - 185
Target Start/End: Complemental strand, 34462967 - 34462884
Alignment:
Q  102 tgtctccgtgggccaggcattcaacatgttgaattgtttcaacacttccctcctccaactcacttttttcccatttcaacaccc 185  Q
    |||||||||||||||  | ||||||  |||||||   |||||||||||||||||||||||||  |||||||   ||||||||||    
T  34462967 tgtctccgtgggccaccctttcaactagttgaatccattcaacacttccctcctccaactcagatttttccacattcaacaccc 34462884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 213
Target Start/End: Complemental strand, 3529663 - 3529569
Alignment:
Q  120 attcaacatgttgaattgtttcaacacttccctcctccaactcacttttttcc-catttcaacaccctcccctacaatggttcaacatgttgaat 213  Q
    |||||||  |||||| | ||||| ||||||||||||||||||||  |||||||   ||||||||||||||  | ||| | |||||||||||||||    
T  3529663 attcaactagttgaactctttcatcacttccctcctccaactcagatttttccttctttcaacaccctccattgcaaggcttcaacatgttgaat 3529569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 130; Significance: 2e-67; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 27 - 246
Target Start/End: Original strand, 30720582 - 30720801
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaa--tccgagcagccaatcaaaacatgtcaagtgtctccgtgggccaggcattca 124  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||   |  | |||||||||||||||||||||||||||    
T  30720582 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaaaattcgagcagccaatcagcgcgcgccaagtgtctccgtgggccaggcattca 30720681  T
Q  125 acatgttgaattgtttcaacacttccctcctccaactcacttttttcccatttcaacaccctcccctacaatggt-tcaacatgttgaatggcaaattca 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||| ||||||||||||||     |||||    
T  30720682 acatgttgaattgtttcaacacttccctcctccaactcacttttttcccatttcaacac---cccctacaatggtctcaacatgttgaatatggcattca 30720778  T
Q  224 agatgccattgtaaatggtctta 246  Q
    | | |||||||||| ||||||||    
T  30720779 acaagccattgtaagtggtctta 30720801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 103 - 247
Target Start/End: Complemental strand, 40300104 - 40299962
Alignment:
Q  103 gtctccgtgggccaggcattcaacatgttgaattgtttcaacacttccctcctccaactcacttttttcccatttcaacaccctcccctacaatggttca 202  Q
    ||||| || |||||||| || ||||||||||| |  |||||||| || ||| ||||||||| |||||||||||||||||||||  |||||||||||||||    
T  40300104 gtctctgtaggccaggctttaaacatgttgaacttattcaacacctctctcatccaactcagttttttcccatttcaacaccc--ccctacaatggttca 40300007  T
Q  203 acatgttgaatggcaaattcaagatgccattgtaaatggtcttat 247  Q
    |||||||||||||||||||||| ||||||||| |  |||||||||    
T  40300006 acatgttgaatggcaaattcaacatgccattgcacttggtcttat 40299962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 27 - 105
Target Start/End: Complemental strand, 33508217 - 33508139
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaacatgtcaagtgtc 105  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  33508217 ttatttgcaatgaaataattgagtccaaattattaagaaaataaaaatccaagcagccaatcaaaacatgtcaagtgtc 33508139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 27 - 106
Target Start/End: Original strand, 42882056 - 42882135
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaacatgtcaagtgtct 106  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| |  |||||| ||||||    
T  42882056 ttatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatcacataatgtcatgtgtct 42882135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 22660328 - 22660405
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaacatgtcaagtgtc 105  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||  ||||||||||||| ||||||||    
T  22660328 ttatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagca-tcaatcaaaacatgccaagtgtc 22660405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 47159019 - 47158957
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatca 89  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  47159019 ttatttgcaatgaaataattgggtccaaattattaagaaaataaaaatccaagcagccaatca 47158957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 103 - 234
Target Start/End: Original strand, 22660514 - 22660642
Alignment:
Q  103 gtctccgtgggccaggcattcaacatgttgaattgtttcaacacttccctcctccaactcacttttttcccatttcaacaccctcccctacaatggttca 202  Q
    ||||| ||||||||  | ||||||||||||||||  |||||||| |  ||||| ||||||| |||||||||| ||||||||   |||||| |||||||||    
T  22660514 gtctctgtgggccaaactttcaacatgttgaatttgttcaacacctatctccttcaactcagttttttcccaattcaacac---cccctataatggttca 22660610  T
Q  203 acatgttgaatggcaaattcaagatgccattg 234  Q
    ||||||||||| |||||||||| || ||||||    
T  22660611 acatgttgaattgcaaattcaacatcccattg 22660642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 27 - 156
Target Start/End: Complemental strand, 45548999 - 45548870
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaacatgtcaagtgtctccgtgggccaggcattcaac 126  Q
    |||||||| |||||||||||| ||||||||||||||||| |||||||||| |||||||||||  |||| | || |||||   | ||||||||| ||||||    
T  45548999 ttatttgctatgaaataattgagtccaaattattaagaaaataaaaatccaagcagccaatcgtaacaagccacgtgtcaatgcgggccaggctttcaac 45548900  T
Q  127 atgttgaattgtttcaacacttccctcctc 156  Q
    ||||||||   ||||||||| || ||||||    
T  45548899 atgttgaaccttttcaacacctctctcctc 45548870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 28317688 - 28317626
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatca 89  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  28317688 ttatttgcaataaaataattgagtccaaattattaagaagataaaaatccaagcagccaatca 28317626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 27 - 105
Target Start/End: Complemental strand, 43201545 - 43201467
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaacatgtcaagtgtc 105  Q
    ||||||||||||||||||||| || ||||||||||||| || |||||||| |||||||||||||||  |||||||||||    
T  43201545 ttatttgcaatgaaataattgagttcaaattattaagatgagaaaaatccaagcagccaatcaaaatctgtcaagtgtc 43201467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 88
Target Start/End: Original strand, 39770185 - 39770246
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatc 88  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  39770185 ttatttgctatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatc 39770246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 88
Target Start/End: Original strand, 38352076 - 38352135
Alignment:
Q  29 atttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatc 88  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| | |||||||||||    
T  38352076 atttgcaatgaaataattgagtccaaattattaagaagataaaaattcaagcagccaatc 38352135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 37952242 - 37952303
Alignment:
Q  28 tatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatca 89  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||   ||||||||||    
T  37952242 tatttgcaatgaaataattgagtccaaattattaagaagataaaaatccagccagccaatca 37952303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 26815590 - 26815650
Alignment:
Q  29 atttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatca 89  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||   ||||||||||    
T  26815590 atttgcaatgaaataattgagtccaaattattaagaagataaaaatccagccagccaatca 26815650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 32749409 - 32749469
Alignment:
Q  29 atttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatca 89  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||   ||||||||||    
T  32749409 atttgcaatgaaataattgagtccaaattattaagaagataaaaatccagtcagccaatca 32749469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 40690795 - 40690855
Alignment:
Q  29 atttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatca 89  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||   ||||||||||    
T  40690795 atttgcaatgaaataattgagtccaaattattaagaagataaaaatccagccagccaatca 40690855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 105
Target Start/End: Complemental strand, 40300231 - 40300168
Alignment:
Q  42 taattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaacatgtcaagtgtc 105  Q
    |||||| ||| |||||||||||||||||||||||  ||||| ||||||||||||||||||||||    
T  40300231 taattgagtctaaattattaagaagataaaaatctaagcagtcaatcaaaacatgtcaagtgtc 40300168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 115142 - 115220
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaacatgtcaagtgtc 105  Q
    ||||||||||||||||||||| ||||||| |||||||| ||||||||||  |||||||||||  ||||||  |||||||    
T  115142 ttatttgcaatgaaataattgagtccaaaatattaagatgataaaaatcgaagcagccaatcgtaacatgctaagtgtc 115220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 20354719 - 20354764
Alignment:
Q  29 atttgcaatgaaataattgggtccaaattattaagaagataaaaat 74  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  20354719 atttgcaatgaaataattgagtccaaattattaagaagataaaaat 20354764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 27 - 76
Target Start/End: Original strand, 36521965 - 36522014
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatcc 76  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  36521965 ttatttgcaatgaaataattgagtccaaagtattaagaagataaaaatcc 36522014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 30567075 - 30567138
Alignment:
Q  30 tttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaac 93  Q
    |||||||||||||||||  ||||||| |||||||| ||||||||||| | ||||||||| ||||    
T  30567075 tttgcaatgaaataattaagtccaaaatattaagatgataaaaatccaaacagccaatcgaaac 30567138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 212
Target Start/End: Original strand, 23780011 - 23780071
Alignment:
Q  152 tcctccaactcacttttttcccatttcaacaccctcccctacaatggttcaacatgttgaa 212  Q
    |||||||||||| |||||| | |||||||||||| || || ||||| ||||||||||||||    
T  23780011 tcctccaactcagtttttttcaatttcaacaccccccactccaatgattcaacatgttgaa 23780071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 74
Target Start/End: Original strand, 38970506 - 38970553
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaat 74  Q
    ||||||||||||||||||||  || ||||||||||||| |||||||||    
T  38970506 ttatttgcaatgaaataatttagttcaaattattaagatgataaaaat 38970553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 172
Target Start/End: Complemental strand, 28317494 - 28317432
Alignment:
Q  110 tgggccaggcattcaacatgttgaattgtttcaacacttccctcctccaactcacttttttcc 172  Q
    |||||||||| ||||||  |||||||   |||||||||||||||||||||||||  |||||||    
T  28317494 tgggccaggctttcaactagttgaatcaattcaacacttccctcctccaactcagatttttcc 28317432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 118 - 163
Target Start/End: Original strand, 42882255 - 42882300
Alignment:
Q  118 gcattcaacatgttgaattgtttcaacacttccctcctccaactca 163  Q
    |||||||||| |||||| | ||||| ||||||||||||||||||||    
T  42882255 gcattcaacaagttgaactctttcatcacttccctcctccaactca 42882300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1905 (Bit Score: 82; Significance: 8e-39; HSPs: 3)
Name: scaffold1905
Description:

Target: scaffold1905; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 103 - 234
Target Start/End: Original strand, 572 - 700
Alignment:
Q  103 gtctccgtgggccaggcattcaacatgttgaattgtttcaacacttccctcctccaactcacttttttcccatttcaacaccctcccctacaatggttca 202  Q
    ||||| ||||||||||| |||||||||||||| |  |||||||| || ||||||||||||| |||||||||||||||||||   ||||||||||||||||    
T  572 gtctctgtgggccaggctttcaacatgttgaacttgttcaacacctctctcctccaactcagttttttcccatttcaacac---cccctacaatggttca 668  T
Q  203 acatgttgaatggcaaattcaagatgccattg 234  Q
    |||||||||||||||||||||| |||||||||    
T  669 acatgttgaatggcaaattcaacatgccattg 700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1905; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 385 - 463
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaacatgtcaagtgtc 105  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||| | ||||||||||||||||||| ||||||||    
T  385 ttatttgcaatgaaataattgagtccaaataattaagaagataaaaattcaagcagccaatcaaaacatgccaagtgtc 463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1905; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 29 - 88
Target Start/End: Complemental strand, 1041 - 982
Alignment:
Q  29 atttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatc 88  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||| | |||||||||||    
T  1041 atttgcaatgaaataattgagtcaaaattattaagaagataaaaattcaagcagccaatc 982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 64; Significance: 5e-28; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 27 - 106
Target Start/End: Original strand, 10886697 - 10886776
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaacatgtcaagtgtct 106  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| || ||||||    
T  10886697 ttatttgcaatgaaataattgggtccaaattattaagaagataacaatccaagcagccaatcaaaacatgccatgtgtct 10886776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 110 - 234
Target Start/End: Original strand, 10886890 - 10887011
Alignment:
Q  110 tgggccaggcattcaacatgttgaattgtttcaacacttccctcctccaactcacttttttcccatttcaacaccctcccctacaatggttcaacatgtt 209  Q
    |||||||||| ||||||  ||||||||  |||||||||||||||||||||||||  ||||||| | ||||||||   |||||||||||||||||||||||    
T  10886890 tgggccaggctttcaactagttgaattcattcaacacttccctcctccaactcagatttttccaaattcaacac---cccctacaatggttcaacatgtt 10886986  T
Q  210 gaatggcaaattcaagatgccattg 234  Q
    |||| |||||||||| || ||||||    
T  10886987 gaattgcaaattcaacatcccattg 10887011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 27 - 134
Target Start/End: Complemental strand, 26653763 - 26653656
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaacatgtcaagtgtctccgtgggccaggcattcaac 126  Q
    |||||||| |||||||||||| ||||||||||||||||| |||||||||| |||||||||||  |||| | || ||||| | | ||||||||| ||||||    
T  26653763 ttatttgctatgaaataattgagtccaaattattaagaaaataaaaatccaagcagccaatcgtaacaagccacgtgtcactgcgggccaggctttcaac 26653664  T
Q  127 atgttgaa 134  Q
    ||||||||    
T  26653663 atgttgaa 26653656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 27 - 134
Target Start/End: Complemental strand, 26759731 - 26759624
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaacatgtcaagtgtctccgtgggccaggcattcaac 126  Q
    |||||||| |||||||||||| ||||||||||||||||| |||||||||| |||||||||||  |||| | || ||||| | | ||||||||| ||||||    
T  26759731 ttatttgctatgaaataattgagtccaaattattaagaaaataaaaatccaagcagccaatcgtaacaagccacgtgtcactgcgggccaggctttcaac 26759632  T
Q  127 atgttgaa 134  Q
    ||||||||    
T  26759631 atgttgaa 26759624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 24348944 - 24349004
Alignment:
Q  28 tatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatc 88  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||    
T  24348944 tatttgcaatgaaataattgaatccaaattattaagaagataaaaatccaagcagccaatc 24349004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 27 - 76
Target Start/End: Original strand, 8668901 - 8668950
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatcc 76  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  8668901 ttatttgcaatgaaataattgagtccaaagtattaagaagataaaaatcc 8668950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 27 - 88
Target Start/End: Original strand, 12502372 - 12502433
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatc 88  Q
    ||||||||||||||||||||| ||||||||||||||||| | |||||||| |||| ||||||    
T  12502372 ttatttgcaatgaaataattgagtccaaattattaagaataaaaaaatccaagcaaccaatc 12502433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 30446724 - 30446789
Alignment:
Q  28 tatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaac 93  Q
    |||||||||||||||||||| ||||||| |||||||| ||||||||| | ||||||||||| ||||    
T  30446724 tatttgcaatgaaataattgagtccaaaatattaagatgataaaaattcaagcagccaatcgaaac 30446789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 34242864 - 34242940
Alignment:
Q  28 tatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaacatgtcaagtgtc 105  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||| ||||| |||||  |||||| || |||||    
T  34242864 tatttgcaatgaaataattag-tccaaattattaagaagataaaaatccaagcagtcaatcgtaacatgccacgtgtc 34242940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 27 - 76
Target Start/End: Original strand, 34841944 - 34841993
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatcc 76  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  34841944 ttatttgcaatgaaataattgagtccaaagtattaagaagataaaaatcc 34841993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 12513482 - 12513542
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaat 87  Q
    ||||||||||||||||||||| ||| ||| ||||||||||| |||||||| ||||||||||    
T  12513482 ttatttgcaatgaaataattgagtctaaaatattaagaagaaaaaaatccaagcagccaat 12513542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 75
Target Start/End: Original strand, 8675163 - 8675210
Alignment:
Q  28 tatttgcaatgaaataattgggtccaaattattaagaagataaaaatc 75  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||    
T  8675163 tatttgcaatgaaataattgagtccaaattattaaaaagataaaaatc 8675210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 94
Target Start/End: Original strand, 8222573 - 8222639
Alignment:
Q  28 tatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaaca 94  Q
    ||||| |||||||||||||| ||||||| |||||||| ||||||||| | ||||||||||| |||||    
T  8222573 tattttcaatgaaataattgagtccaaaatattaagatgataaaaattcaagcagccaatcgaaaca 8222639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 29 - 88
Target Start/End: Complemental strand, 109832 - 109773
Alignment:
Q  29 atttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatc 88  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  109832 atttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatc 109773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 92
Target Start/End: Original strand, 106298 - 106361
Alignment:
Q  29 atttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaa 92  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||   |||||||||||||    
T  106298 atttgcaatgaaataattgagtccaaattattaagaagataaaaatccagccagccaatcaaaa 106361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 83522 - 83462
Alignment:
Q  29 atttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatca 89  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||   ||||||||||    
T  83522 atttgcaatgaaataattgagtccaaattattaagaagataaaaatccagccagccaatca 83462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1183 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold1183
Description:

Target: scaffold1183; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 27 - 88
Target Start/End: Original strand, 111 - 172
Alignment:
Q  27 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatc 88  Q
    ||||||||||||||||||||| ||| |||||||||||| ||||||||||| || ||||||||    
T  111 ttatttgcaatgaaataattgagtcaaaattattaagatgataaaaatccaagaagccaatc 172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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