View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7824_low_25 (Length: 332)

Name: NF7824_low_25
Description: NF7824
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7824_low_25
NF7824_low_25
[»] chr7 (5 HSPs)
chr7 (17-325)||(7190199-7190504)
chr7 (226-325)||(8839327-8839426)
chr7 (226-325)||(29059801-29059900)
chr7 (226-325)||(31492099-31492198)
chr7 (236-325)||(2657892-2657981)
[»] chr1 (3 HSPs)
chr1 (246-325)||(29124741-29124820)
chr1 (236-312)||(45806245-45806321)
chr1 (229-325)||(22022116-22022212)
[»] chr8 (5 HSPs)
chr8 (226-322)||(15682928-15683024)
chr8 (236-325)||(12958141-12958230)
chr8 (236-325)||(2743929-2744018)
chr8 (226-325)||(19715772-19715871)
chr8 (273-325)||(30936000-30936052)
[»] chr6 (4 HSPs)
chr6 (246-325)||(12411144-12411223)
chr6 (231-325)||(25084030-25084124)
chr6 (235-312)||(28099252-28099329)
chr6 (263-325)||(21910201-21910263)
[»] chr3 (3 HSPs)
chr3 (226-325)||(25224695-25224794)
chr3 (277-325)||(28967279-28967327)
chr3 (273-325)||(40294608-40294660)
[»] chr2 (4 HSPs)
chr2 (236-325)||(31579285-31579374)
chr2 (236-325)||(12133286-12133375)
chr2 (226-325)||(5394393-5394491)
chr2 (226-325)||(44732619-44732718)
[»] chr4 (7 HSPs)
chr4 (226-325)||(31307112-31307211)
chr4 (246-325)||(38844234-38844313)
chr4 (236-287)||(51626362-51626413)
chr4 (267-325)||(25712503-25712561)
chr4 (236-325)||(38766085-38766174)
chr4 (226-310)||(35972354-35972438)
chr4 (226-294)||(46016176-46016244)
[»] scaffold0182 (1 HSPs)
scaffold0182 (226-312)||(26340-26426)
[»] chr5 (2 HSPs)
chr5 (236-325)||(10591923-10592012)
chr5 (227-307)||(18909348-18909428)


Alignment Details
Target: chr7 (Bit Score: 222; Significance: 1e-122; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 17 - 325
Target Start/End: Original strand, 7190199 - 7190504
Alignment:
Q  17 aatgagaagttcatgaattataggtaactatttgagagagaagttatagttgaaattgatgcaaagcatatctacttgtttaccaatagagcggtttcat 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  7190199 aatgagaagttcatgaattataggtaactatttgagagagaagttatagttgaaattgatgcaaagtatatctacttgtttaccaatagaggggtttcat 7190298  T
Q  117 agagaagaaacaataacacgcaaaacttgttagggtttcatatgataacaaccacgtaacatattaaaaggttacaaaaacaacatataataagcgtcgt 216  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||||    
T  7190299 agagaagaaacaata--acgcaaaacttgttagggtttcatatgataacaacaacataacatattaaaaggttac-aaaacaacatataataagcgtcgt 7190395  T
Q  217 cttctctttggcggcaagttctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagacttgt 316  Q
    |||||||||||||| ||||||||| |||||||||||||||||||| ||||||||| ||| |||| ||||||| |||| | ||||| ||||||||| || |    
T  7190396 cttctctttggcggtaagttctccctaaaagttttaacacggctgcatgcccaatgctgaattcaaactcataaccttggttaagctagaagagatttat 7190495  T
Q  317 ttcatctca 325  Q
    | |||||||    
T  7190496 tccatctca 7190504  T

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Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 325
Target Start/End: Original strand, 8839327 - 8839426
Alignment:
Q  226 ggcggcaagttctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 325  Q
    |||||||  |||||| ||| ||||||||| | |||| ||||||||  |||||||||||| || ||||| | ||||| ||||||||||  |||||||||||    
T  8839327 ggcggcagattctccctaagagttttaacgctgctgcatgcccaaggctggattcgaacccaggaccttggttaagctagaagagacccgtttcatctca 8839426  T

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Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 325
Target Start/End: Complemental strand, 29059900 - 29059801
Alignment:
Q  226 ggcggcaagttctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 325  Q
    ||||||| | ||||| ||| ||||||||||| |||| ||||||||  |||||||||||| || ||||| | ||||| ||||||||||  ||| |||||||    
T  29059900 ggcggcaggctctccctaagagttttaacactgctgcatgcccaaggctggattcgaacccaggaccttggttaagctagaagagacccgttccatctca 29059801  T

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Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 325
Target Start/End: Complemental strand, 31492198 - 31492099
Alignment:
Q  226 ggcggcaagttctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 325  Q
    ||||||| | ||||| ||| ||||||||||| |||| ||||||||  |||||||||||| || ||||| | ||||| ||||||||||  ||| |||||||    
T  31492198 ggcggcaggctctccctaagagttttaacactgctgcatgcccaaggctggattcgaacccaggaccttggttaagctagaagagacccgttccatctca 31492099  T

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Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 325
Target Start/End: Original strand, 2657892 - 2657981
Alignment:
Q  236 tctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 325  Q
    ||||| ||| |||||||||   |||| ||||||||  ||| ||| ||||||| | ||| ||||||||||||||||||| ||| |||||||    
T  2657892 tctccttaagagttttaacgttgctgcatgcccaaggctgtatttgaactcagggccttgattaagttagaagagactcgttccatctca 2657981  T

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Target: chr1 (Bit Score: 44; Significance: 5e-16; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 246 - 325
Target Start/End: Complemental strand, 29124820 - 29124741
Alignment:
Q  246 agttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 325  Q
    ||||||||| | |||| ||||||||| ||||||||||||||||||||  | ||||| ||||||||||| |||||||||||    
T  29124820 agttttaacgctgctgcatgcccaatgctggattcgaactcatgaccctggttaagctagaagagactcgtttcatctca 29124741  T

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Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 312
Target Start/End: Complemental strand, 45806321 - 45806245
Alignment:
Q  236 tctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagac 312  Q
    ||||| ||| |||||||| || |||| |||||||| |||| ||||||||||| ||||| | ||||| ||||||||||    
T  45806321 tctccctaagagttttaaaactgctgcatgcccaagactgaattcgaactcaggaccttggttaagatagaagagac 45806245  T

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Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 325
Target Start/End: Complemental strand, 22022212 - 22022116
Alignment:
Q  229 ggcaagttctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 325  Q
    |||||||||||| ||| ||||||||  | |||| ||||||||  |||||||||||| ||  ||||   ||||| |||||||||| |||| |||||||    
T  22022212 ggcaagttctccctaagagttttaatgctgctgcatgcccaaggctggattcgaacccacaaccttagttaagctagaagagacctgttccatctca 22022116  T

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Target: chr8 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 226 - 322
Target Start/End: Complemental strand, 15683024 - 15682928
Alignment:
Q  226 ggcggcaagttctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagacttgtttcatc 322  Q
    ||||||| | ||||| ||| ||||||||| | |||| ||||||||  ||||||||||||||| ||||| ||||||| ||||||||||| ||| ||||    
T  15683024 ggcggcaggctctccctaagagttttaacgctgctgcatgcccaaggctggattcgaactcaggaccttgattaagctagaagagactcgttccatc 15682928  T

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Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 236 - 325
Target Start/End: Original strand, 12958141 - 12958230
Alignment:
Q  236 tctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 325  Q
    ||||| ||| ||||||||| | |||| ||||||||| |||||||| ||| |||||||| | ||||| ||||||||||| ||| |||||||    
T  12958141 tctccctaagagttttaacgctgctgcatgcccaatgctggattcaaacccatgaccttggttaagctagaagagactagttccatctca 12958230  T

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Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 236 - 325
Target Start/End: Complemental strand, 2744018 - 2743929
Alignment:
Q  236 tctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 325  Q
    ||||| ||| ||||||||||| |||| ||||||||  |||||||||||| || ||||| | ||||| ||||||||||  ||| |||||||    
T  2744018 tctccctaagagttttaacactgctgcatgcccaaggctggattcgaacccaggaccttggttaagctagaagagacccgttccatctca 2743929  T

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Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 325
Target Start/End: Original strand, 19715772 - 19715871
Alignment:
Q  226 ggcggcaagttctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 325  Q
    ||||||||| ||||| | | ||||||||| | |||| ||||||||  |||||||||||| || ||||| | ||||| ||||| |||| |||| |||||||    
T  19715772 ggcggcaagctctccctgagagttttaacgctgctgcatgcccaaggctggattcgaacccaggaccttggttaagctagaaaagacatgttccatctca 19715871  T

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Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 325
Target Start/End: Complemental strand, 30936052 - 30936000
Alignment:
Q  273 ctggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 325  Q
    ||||||||||||||| ||||| | ||||||||||||||||  ||| |||||||    
T  30936052 ctggattcgaactcaggaccttggttaagttagaagagacccgttccatctca 30936000  T

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Target: chr6 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 246 - 325
Target Start/End: Complemental strand, 12411223 - 12411144
Alignment:
Q  246 agttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 325  Q
    ||||||||| | |||| ||||||||  ||||||||||||||| ||||| | |||||||||||||||| |||| |||||||    
T  12411223 agttttaacgctgctgcatgcccaaggctggattcgaactcaggaccttggttaagttagaagagacctgttccatctca 12411144  T

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Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 231 - 325
Target Start/End: Complemental strand, 25084124 - 25084030
Alignment:
Q  231 caagttctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 325  Q
    |||| ||||| ||| ||||||||||  |||| ||| |||| |||| ||||||||||| ||| | ||||||| |||||||||||||| ||||||||    
T  25084124 caagctctccctaagagttttaacattgctgcatgtccaagactgaattcgaactcaagactttgattaagctagaagagacttgtgtcatctca 25084030  T

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Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 312
Target Start/End: Complemental strand, 28099329 - 28099252
Alignment:
Q  235 ttctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagac 312  Q
    |||||| ||||||||||||||| |||| ||||||||  |||||||||||| || |||||   ||||| ||||||||||    
T  28099329 ttctccctaaaagttttaacactgctgcatgcccaaggctggattcgaacccaggaccttagttaaggtagaagagac 28099252  T

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Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 325
Target Start/End: Complemental strand, 21910263 - 21910201
Alignment:
Q  263 atgcccaatactggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 325  Q
    ||||||||  |||||||||||| || || || | ||||| |||||||||||||||||||||||    
T  21910263 atgcccaaggctggattcgaacccaggatcttggttaagctagaagagacttgtttcatctca 21910201  T

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Target: chr3 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 325
Target Start/End: Complemental strand, 25224794 - 25224695
Alignment:
Q  226 ggcggcaagttctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 325  Q
    ||||||||||||||| ||| ||||||||| | |||| || ||||| ||| ||||||||| || ||||| | ||||| ||||||||||  |||||||||||    
T  25224794 ggcggcaagttctccttaagagttttaacgctgctgcattcccaaaacttgattcgaacccaggaccttggttaagctagaagagacccgtttcatctca 25224695  T

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Target: chr3; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 325
Target Start/End: Original strand, 28967279 - 28967327
Alignment:
Q  277 attcgaactcatgacctagattaagttagaagagacttgtttcatctca 325  Q
    |||||||| |||||||| | ||||||||||||||||| || ||||||||    
T  28967279 attcgaacacatgaccttggttaagttagaagagactcgtgtcatctca 28967327  T

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Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 325
Target Start/End: Complemental strand, 40294660 - 40294608
Alignment:
Q  273 ctggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 325  Q
    ||||||||||||||| ||||| ||||||| |||| |||||| || ||||||||    
T  40294660 ctggattcgaactcaggaccttgattaaggtagaggagactcgtgtcatctca 40294608  T

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Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 236 - 325
Target Start/End: Original strand, 31579285 - 31579374
Alignment:
Q  236 tctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 325  Q
    ||||| ||||||||||||||| | || ||||||||  |||||||||||| || ||||| ||||||| ||||||||||  ||| |||||||    
T  31579285 tctccctaaaagttttaacactgttgcatgcccaaggctggattcgaacccaagaccttgattaagctagaagagacccgttacatctca 31579374  T

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Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 236 - 325
Target Start/End: Original strand, 12133286 - 12133375
Alignment:
Q  236 tctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 325  Q
    ||||| ||| |||||||||   |||| ||| ||||  |||||||||||| |||||||| ||||||| ||||||||||| ||| |||||||    
T  12133286 tctccctaagagttttaacgttgctgcatgtccaaggctggattcgaacccatgaccttgattaagctagaagagactcgttccatctca 12133375  T

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Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 325
Target Start/End: Complemental strand, 5394491 - 5394393
Alignment:
Q  226 ggcggcaagttctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 325  Q
    ||||||| | ||||| ||| |||||||||| | ||| ||||||||  |||||||||||| || ||||| | ||||| ||||||||||| ||| |||||||    
T  5394491 ggcggcaggctctccctaagagttttaacatg-ctgcatgcccaaggctggattcgaacccaggaccttggttaagctagaagagactcgttccatctca 5394393  T

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Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 325
Target Start/End: Original strand, 44732619 - 44732718
Alignment:
Q  226 ggcggcaagttctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 325  Q
    ||||||| | ||||| ||| ||||||||||| |||| ||||||||  |||||||||||| || ||||| | ||||| || |||||||  ||| |||||||    
T  44732619 ggcggcaggctctccctaagagttttaacactgctgcatgcccaaggctggattcgaacccaggaccttggttaagctataagagacccgttccatctca 44732718  T

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Target: chr4 (Bit Score: 36; Significance: 0.00000000003; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 325
Target Start/End: Original strand, 31307112 - 31307211
Alignment:
Q  226 ggcggcaagttctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 325  Q
    ||||||| | ||||| ||| ||||||||||| |||| ||||||||  |||||||||||| || ||||| | ||||| ||||||||||  ||| |||||||    
T  31307112 ggcggcaggctctccctaagagttttaacactgctgcatgcccaaggctggattcgaacccaggaccttggttaagctagaagagacccgttccatctca 31307211  T

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Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 325
Target Start/End: Original strand, 38844234 - 38844313
Alignment:
Q  246 agttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 325  Q
    ||||||||| | | || ||||||||  ||||||||||||||||||||| | ||||| ||||||||||| ||| |||||||    
T  38844234 agttttaacgctgttgcatgcccaaagctggattcgaactcatgaccttggttaagctagaagagactcgttccatctca 38844313  T

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Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 236 - 287
Target Start/End: Original strand, 51626362 - 51626413
Alignment:
Q  236 tctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactca 287  Q
    ||||| ||||||||||||||| |||| ||||||||  |||||||||||||||    
T  51626362 tctccctaaaagttttaacactgctgcatgcccaaggctggattcgaactca 51626413  T

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Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 325
Target Start/End: Original strand, 25712503 - 25712561
Alignment:
Q  267 ccaatactggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 325  Q
    |||| |||||||||||| ||||||||| | ||||| |||| ||||||||| ||||||||    
T  25712503 ccaagactggattcgaattcatgaccttgtttaagctagaggagacttgtatcatctca 25712561  T

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Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 325
Target Start/End: Complemental strand, 38766174 - 38766085
Alignment:
Q  236 tctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 325  Q
    ||||| ||| ||||||||| | |||| ||||||||  |||||||| ||| || ||||| | ||||| ||||||||||| ||| |||||||    
T  38766174 tctccctaagagttttaacgctgctgcatgcccaaggctggattcaaacccaggaccttggttaagctagaagagactcgttccatctca 38766085  T

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Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 226 - 310
Target Start/End: Complemental strand, 35972438 - 35972354
Alignment:
Q  226 ggcggcaagttctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagag 310  Q
    ||||||||  ||||| ||| ||||||||| | ||||||||||||   |||||||||||| || ||||| | ||||| ||||||||    
T  35972438 ggcggcaaactctccctaatagttttaacgctgctgtatgcccatggctggattcgaacccaagaccttggttaagctagaagag 35972354  T

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Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 226 - 294
Target Start/End: Complemental strand, 46016244 - 46016176
Alignment:
Q  226 ggcggcaagttctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgaccta 294  Q
    ||||||| | ||||| ||| ||||||||||| |||| ||||||||  |||||||||||| || ||||||    
T  46016244 ggcggcaggctctccctaagagttttaacactgctgcatgcccaaggctggattcgaacccaggaccta 46016176  T

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Target: scaffold0182 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 226 - 312
Target Start/End: Complemental strand, 26426 - 26340
Alignment:
Q  226 ggcggcaagttctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagac 312  Q
    ||||||| | ||||| ||| ||||||||||| |||| ||||||||  |||||||||||| || ||||| | ||||| ||||||||||    
T  26426 ggcggcaggctctccctaagagttttaacactgctgcatgcccaaggctggattcgaacccaggaccttggttaagctagaagagac 26340  T

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Target: chr5 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 325
Target Start/End: Complemental strand, 10592012 - 10591923
Alignment:
Q  236 tctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaagagacttgtttcatctca 325  Q
    ||||| ||| ||||||||||| |||| ||||||||  |||||||||||| || ||||| | ||||  ||||||||||  ||| |||||||    
T  10592012 tctccctaagagttttaacactgctgcatgcccaaggctggattcgaacccaggaccttggttaatctagaagagacccgttccatctca 10591923  T

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Target: chr5; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 307
Target Start/End: Original strand, 18909348 - 18909428
Alignment:
Q  227 gcggcaagttctccgtaaaagttttaacacggctgtatgcccaatactggattcgaactcatgacctagattaagttagaa 307  Q
    ||||||| |||||| ||| ||||||||||| |||| || |||||  ||||||||||||  | ||||| ||||||| |||||    
T  18909348 gcggcaaattctccctaagagttttaacactgctgcatacccaaggctggattcgaacctaggaccttgattaagctagaa 18909428  T

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