View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7824_low_32 (Length: 285)
Name: NF7824_low_32
Description: NF7824
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7824_low_32 |
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Alignment Details
Target: chr8 (Bit Score: 249; Significance: 1e-138; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 12 - 268
Target Start/End: Complemental strand, 39902624 - 39902368
Alignment:
| Q |
12 |
agtgagaagaaaaccaattaaaatgaaaacctatgtccacataattgcattcgttgtggggattattgtgaaaatgcttggcatcatgtttgactttcca |
111 |
Q |
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| T |
39902624 |
agtgagaagaaaaccaattaaaatgaaaacctatgtccacataattgcattcgttgtggggattattgtgaaaatgcttggcatcatgtttgactttcca |
39902525 |
T |
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| Q |
112 |
taattcaatcgacacttggaaattattctttagtgttgcaaatttattgtctcagataaagtgtagcatgtggtgtatgtgaacctgtgggaaagttgta |
211 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39902524 |
taattcaatcgacacttggaaattattctttagtgttgcaaattaaatgtctcagataaagtgtagcatgtggtgtatgtgaacctgtgggaaagttgta |
39902425 |
T |
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| Q |
212 |
gtttgaagctttgagaagagattgatgaagttgttaggactatatatcaacattatg |
268 |
Q |
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| T |
39902424 |
gtttgaagctttgagaagagattgatgaagttgttaggactatatatcaacattatg |
39902368 |
T |
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