View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7824_low_38 (Length: 249)
Name: NF7824_low_38
Description: NF7824
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7824_low_38 |
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Alignment Details
Target: chr3 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 32 - 242
Target Start/End: Complemental strand, 17106546 - 17106336
Alignment:
| Q |
32 |
catccatctacaatagcatcaaattcataaaatcaagtgaacaaagcacaaagattatcctagaaattcggcttaggaactctagtgaaatttgagcaaa |
131 |
Q |
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| T |
17106546 |
catccatctacaatagcatcaaattcataaaatcaagtgaacaaagcacatagattatcctagaaattcggctttggaactctagtgaaatttgagcaaa |
17106447 |
T |
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| Q |
132 |
cgaagcccacaaggaatgtaatgatcaatacaacgatttttgaataaaagattgtgaaattcgaagtagtagaagtacctcaagcacagacgaagaactt |
231 |
Q |
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| T |
17106446 |
cgaagcccacaaggaatgtaatgatcaatacaacgttttttgaataaaagattgtgaatttcaaagtagtagaagtacctgaagcacagacgaagaactt |
17106347 |
T |
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| Q |
232 |
aagaacacgaa |
242 |
Q |
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| T |
17106346 |
aagaacacgaa |
17106336 |
T |
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