View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7824_low_39 (Length: 246)
Name: NF7824_low_39
Description: NF7824
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7824_low_39 |
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Alignment Details
Target: chr4 (Bit Score: 231; Significance: 1e-128; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 231; E-Value: 1e-128
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 50386478 - 50386244
Alignment:
| Q |
1 |
tgagtttttctttgagaataatgtccatatctaatggatacaactctttggttttcaagattcttgtgtagaaggaaattgcttggtctatacttatctt |
100 |
Q |
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| T |
50386478 |
tgagtttttctttgagaataatgtccatatctaatggatacaactctttggttttcaagattcttgtgtagaaggaaattgcttggtctatacttatctt |
50386379 |
T |
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| Q |
101 |
gtcaattttgacatccttcttagaaatgtggtttgttgggaaactagttggtggatggagaaatatgatgagtgaggtgagattgaaatagttgcatttg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
50386378 |
gtcaattttgacatccttcttagaaatgtggtttgttgggaaactagttggtggatggagaaatatgatgagtgaggtgaaattgaaatagttgcatttg |
50386279 |
T |
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| Q |
201 |
ttggtgaataggtttttagaggcattgttattctt |
235 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
50386278 |
ttggtgaataggtttttagaggcattgttattctt |
50386244 |
T |
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