View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7824_low_45 (Length: 206)
Name: NF7824_low_45
Description: NF7824
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7824_low_45 |
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| [»] scaffold0028 (1 HSPs) |
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Alignment Details
Target: scaffold0028 (Bit Score: 77; Significance: 6e-36; HSPs: 1)
Name: scaffold0028
Description:
Target: scaffold0028; HSP #1
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 13 - 93
Target Start/End: Original strand, 125564 - 125644
Alignment:
| Q |
13 |
aagaatattcagtataaacgttttgaaattattaccaggaagatgaacagttgagtatcacctgcaaaataacaacaaagg |
93 |
Q |
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| T |
125564 |
aagaatattcaatataaacgttttgaaattattaccaggaagatgaacagttgagtatcacctgcaaaataacaacaaagg |
125644 |
T |
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