View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7824_low_8 (Length: 523)

Name: NF7824_low_8
Description: NF7824
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7824_low_8
NF7824_low_8
[»] chr1 (50 HSPs)
chr1 (52-295)||(40095440-40095688)
chr1 (304-499)||(40095752-40095947)
chr1 (25-168)||(25559987-25560137)
chr1 (78-168)||(12973501-12973591)
chr1 (25-167)||(50471169-50471317)
chr1 (84-164)||(27507548-27507628)
chr1 (87-167)||(36203503-36203583)
chr1 (84-168)||(35980444-35980528)
chr1 (79-164)||(2490080-2490165)
chr1 (88-171)||(26345119-26345202)
chr1 (84-165)||(3935401-3935482)
chr1 (78-167)||(6248019-6248108)
chr1 (78-166)||(8268600-8268689)
chr1 (79-168)||(16529552-16529641)
chr1 (25-159)||(18309951-18310090)
chr1 (79-167)||(8165603-8165691)
chr1 (79-167)||(51252467-51252555)
chr1 (84-169)||(16062803-16062888)
chr1 (79-168)||(21685594-21685683)
chr1 (79-167)||(11074451-11074538)
chr1 (29-167)||(52380718-52380862)
chr1 (79-166)||(32953982-32954068)
chr1 (78-164)||(1161793-1161879)
chr1 (102-164)||(17988993-17989055)
chr1 (73-154)||(44918503-44918584)
chr1 (25-162)||(9962139-9962282)
chr1 (29-162)||(11898958-11899097)
chr1 (87-167)||(17651694-17651774)
chr1 (84-163)||(52828769-52828848)
chr1 (78-156)||(29388986-29389064)
chr1 (73-167)||(42789649-42789743)
chr1 (79-164)||(10847574-10847659)
chr1 (79-167)||(27350598-27350689)
chr1 (79-167)||(39256688-39256776)
chr1 (84-163)||(34914080-34914159)
chr1 (135-168)||(20493690-20493723)
chr1 (102-167)||(25532714-25532779)
chr1 (79-164)||(32910421-32910506)
chr1 (29-171)||(33474386-33474529)
chr1 (84-165)||(33769822-33769903)
chr1 (115-167)||(5559866-5559918)
chr1 (87-155)||(6694428-6694496)
chr1 (79-167)||(8211221-8211309)
chr1 (90-170)||(35375115-35375195)
chr1 (115-171)||(41198071-41198127)
chr1 (84-170)||(9330326-9330412)
chr1 (115-169)||(14462178-14462232)
chr1 (84-146)||(35980325-35980387)
chr1 (64-156)||(24629901-24629994)
chr1 (135-167)||(5155451-5155483)
[»] chr6 (35 HSPs)
chr6 (25-164)||(31945421-31945561)
chr6 (84-166)||(24645009-24645091)
chr6 (79-167)||(22413780-22413868)
chr6 (78-167)||(35040261-35040350)
chr6 (79-167)||(9686000-9686088)
chr6 (84-167)||(6266846-6266929)
chr6 (103-167)||(8135378-8135442)
chr6 (79-163)||(26645436-26645520)
chr6 (79-163)||(26751402-26751486)
chr6 (79-170)||(29048066-29048157)
chr6 (84-166)||(13091948-13092030)
chr6 (79-168)||(10391074-10391163)
chr6 (79-167)||(10590793-10590881)
chr6 (102-168)||(20500506-20500572)
chr6 (84-169)||(15859666-15859751)
chr6 (79-163)||(892393-892477)
chr6 (36-168)||(13859386-13859524)
chr6 (79-172)||(5287956-5288049)
chr6 (87-168)||(10494441-10494522)
chr6 (79-163)||(19135164-19135249)
chr6 (79-167)||(13810921-13811009)
chr6 (79-167)||(5874204-5874292)
chr6 (115-167)||(7607860-7607912)
chr6 (135-171)||(12270495-12270531)
chr6 (112-167)||(13532366-13532422)
chr6 (115-167)||(16704942-16704994)
chr6 (79-147)||(25006383-25006451)
chr6 (79-167)||(25136714-25136802)
chr6 (115-167)||(30396041-30396093)
chr6 (78-156)||(11417008-11417087)
chr6 (79-139)||(30752501-30752561)
chr6 (117-168)||(10483964-10484015)
chr6 (84-147)||(32190727-32190790)
chr6 (111-172)||(33550257-33550318)
chr6 (102-162)||(28610564-28610624)
[»] chr7 (58 HSPs)
chr7 (79-162)||(8568606-8568689)
chr7 (84-167)||(32942136-32942219)
chr7 (87-167)||(29628050-29628130)
chr7 (79-163)||(31287831-31287915)
chr7 (79-164)||(40848796-40848881)
chr7 (79-167)||(27054784-27054872)
chr7 (84-167)||(18673247-18673330)
chr7 (25-153)||(23032630-23032769)
chr7 (79-164)||(31876682-31876766)
chr7 (102-167)||(45898135-45898200)
chr7 (79-167)||(5932638-5932726)
chr7 (79-167)||(7209321-7209409)
chr7 (73-165)||(7760049-7760141)
chr7 (79-167)||(13852251-13852339)
chr7 (84-167)||(30079644-30079732)
chr7 (79-167)||(31983048-31983135)
chr7 (84-167)||(524923-525006)
chr7 (79-166)||(11834551-11834638)
chr7 (103-154)||(26215200-26215251)
chr7 (79-170)||(47069608-47069699)
chr7 (79-170)||(47204509-47204600)
chr7 (115-168)||(1576320-1576373)
chr7 (79-168)||(8769015-8769104)
chr7 (95-172)||(10338879-10338955)
chr7 (102-163)||(11399064-11399125)
chr7 (102-167)||(29211723-29211788)
chr7 (78-167)||(34750930-34751019)
chr7 (79-156)||(47903201-47903278)
chr7 (79-167)||(3213274-3213362)
chr7 (79-167)||(10671763-10671851)
chr7 (84-167)||(2409023-2409106)
chr7 (79-150)||(8118332-8118403)
chr7 (118-161)||(10069142-10069185)
chr7 (135-169)||(11206466-11206500)
chr7 (84-150)||(23729347-23729413)
chr7 (79-128)||(20334565-20334614)
chr7 (102-170)||(2661789-2661857)
chr7 (87-167)||(7205938-7206018)
chr7 (84-172)||(43908613-43908701)
chr7 (117-164)||(1335264-1335311)
chr7 (88-163)||(16535804-16535879)
chr7 (88-163)||(16629783-16629858)
chr7 (124-167)||(27393070-27393113)
chr7 (113-167)||(4153813-4153867)
chr7 (78-148)||(21237832-21237902)
chr7 (79-156)||(24361546-24361622)
chr7 (79-144)||(48642745-48642810)
chr7 (131-167)||(323159-323195)
chr7 (103-163)||(6880182-6880241)
chr7 (130-170)||(7137992-7138032)
chr7 (131-167)||(10286921-10286957)
chr7 (135-167)||(12117542-12117574)
chr7 (113-165)||(26525027-26525079)
chr7 (84-128)||(27456341-27456385)
chr7 (32-72)||(32237692-32237732)
chr7 (84-164)||(32823550-32823630)
chr7 (113-153)||(33434075-33434114)
chr7 (102-166)||(37375261-37375325)
[»] chr5 (44 HSPs)
chr5 (25-167)||(36567664-36567807)
chr5 (79-167)||(27572097-27572185)
chr5 (87-167)||(10090248-10090328)
chr5 (84-170)||(25495024-25495110)
chr5 (29-167)||(12681070-12681204)
chr5 (84-167)||(12379070-12379154)
chr5 (84-163)||(40884277-40884356)
chr5 (84-170)||(28224921-28225007)
chr5 (87-153)||(35240884-35240950)
chr5 (102-167)||(22747648-22747712)
chr5 (79-167)||(8408933-8409021)
chr5 (78-170)||(9160920-9161010)
chr5 (79-166)||(30265843-30265930)
chr5 (102-164)||(23780770-23780832)
chr5 (102-164)||(23867723-23867785)
chr5 (78-162)||(2588922-2589006)
chr5 (79-167)||(11917348-11917436)
chr5 (79-167)||(15068403-15068491)
chr5 (102-166)||(18432022-18432086)
chr5 (79-167)||(27886468-27886556)
chr5 (115-167)||(40987816-40987868)
chr5 (79-167)||(42544601-42544689)
chr5 (79-165)||(17085289-17085375)
chr5 (95-153)||(34087376-34087434)
chr5 (79-164)||(36103663-36103749)
chr5 (79-169)||(41454799-41454889)
chr5 (124-161)||(38176513-38176550)
chr5 (124-161)||(38203737-38203774)
chr5 (115-168)||(41061719-41061772)
chr5 (111-163)||(333361-333413)
chr5 (135-167)||(667722-667754)
chr5 (25-168)||(6633275-6633410)
chr5 (79-167)||(38433640-38433728)
chr5 (135-170)||(701159-701194)
chr5 (87-154)||(32244436-32244503)
chr5 (79-145)||(33792625-33792690)
chr5 (102-167)||(6895386-6895451)
chr5 (115-167)||(1495445-1495497)
chr5 (114-146)||(1681086-1681118)
chr5 (79-163)||(2226936-2227020)
chr5 (102-162)||(6594920-6594980)
chr5 (115-167)||(27111142-27111194)
chr5 (135-167)||(30001954-30001986)
chr5 (112-168)||(34881409-34881465)
[»] chr3 (36 HSPs)
chr3 (26-172)||(55467635-55467787)
chr3 (25-167)||(27054017-27054165)
chr3 (79-163)||(54121967-54122051)
chr3 (78-169)||(2832450-2832541)
chr3 (79-170)||(26758163-26758254)
chr3 (79-163)||(17144782-17144865)
chr3 (79-170)||(38652041-38652131)
chr3 (84-159)||(45629143-45629218)
chr3 (87-161)||(22257559-22257633)
chr3 (84-165)||(21586900-21586981)
chr3 (79-164)||(42363277-42363362)
chr3 (79-168)||(43030358-43030447)
chr3 (79-167)||(6004439-6004527)
chr3 (25-170)||(2566322-2566473)
chr3 (79-169)||(20038325-20038415)
chr3 (78-151)||(8558009-8558082)
chr3 (87-168)||(26292016-26292097)
chr3 (87-167)||(37044863-37044943)
chr3 (102-161)||(20846418-20846477)
chr3 (78-161)||(44650912-44650995)
chr3 (29-168)||(51191645-51191791)
chr3 (102-166)||(10481720-10481784)
chr3 (115-167)||(37282225-37282277)
chr3 (53-170)||(40483862-40483985)
chr3 (79-167)||(51149709-51149797)
chr3 (112-167)||(9827863-9827918)
chr3 (87-168)||(32880242-32880323)
chr3 (135-168)||(35402313-35402346)
chr3 (79-140)||(45915255-45915316)
chr3 (135-167)||(10369154-10369186)
chr3 (135-167)||(34794537-34794569)
chr3 (84-167)||(35532193-35532276)
chr3 (105-150)||(45699570-45699614)
chr3 (118-167)||(50562661-50562710)
chr3 (79-167)||(4669699-4669787)
chr3 (131-167)||(32055434-32055470)
[»] chr4 (57 HSPs)
chr4 (26-171)||(36106412-36106564)
chr4 (79-166)||(48293457-48293544)
chr4 (79-162)||(23450036-23450119)
chr4 (25-166)||(48338285-48338431)
chr4 (86-167)||(32223378-32223459)
chr4 (79-167)||(23120309-23120397)
chr4 (78-169)||(43630518-43630609)
chr4 (94-168)||(4642363-4642437)
chr4 (29-167)||(6333259-6333403)
chr4 (79-167)||(20986364-20986452)
chr4 (79-167)||(40900135-40900223)
chr4 (21-169)||(5122372-5122526)
chr4 (84-170)||(5262021-5262107)
chr4 (84-162)||(28147727-28147805)
chr4 (73-165)||(51394663-51394755)
chr4 (73-169)||(52344678-52344774)
chr4 (78-161)||(21068994-21069077)
chr4 (84-169)||(10218619-10218704)
chr4 (79-167)||(40806870-40806958)
chr4 (25-164)||(8484611-8484761)
chr4 (102-169)||(18319626-18319693)
chr4 (102-169)||(18398988-18399055)
chr4 (115-170)||(34277436-34277491)
chr4 (88-130)||(1566156-1566198)
chr4 (102-168)||(10778548-10778614)
chr4 (79-169)||(31301236-31301326)
chr4 (98-171)||(41260211-41260284)
chr4 (29-167)||(54274016-54274150)
chr4 (115-167)||(24574735-24574787)
chr4 (79-167)||(29636716-29636804)
chr4 (79-167)||(36077515-36077603)
chr4 (102-162)||(42198737-42198797)
chr4 (79-167)||(50571010-50571098)
chr4 (124-167)||(9280410-9280453)
chr4 (79-169)||(30194027-30194118)
chr4 (84-167)||(45983326-45983409)
chr4 (135-169)||(29644233-29644267)
chr4 (87-149)||(41325056-41325118)
chr4 (135-169)||(42557665-42557699)
chr4 (64-156)||(11031671-11031764)
chr4 (115-164)||(42414129-42414178)
chr4 (130-167)||(42430494-42430531)
chr4 (102-167)||(48255660-48255725)
chr4 (73-161)||(8176638-8176726)
chr4 (79-167)||(32136635-32136723)
chr4 (102-169)||(40494364-40494431)
chr4 (87-162)||(45464137-45464212)
chr4 (111-153)||(5061293-5061335)
chr4 (112-170)||(7785081-7785139)
chr4 (79-153)||(23625953-23626027)
chr4 (88-170)||(27743159-27743241)
chr4 (121-163)||(29335208-29335250)
chr4 (79-156)||(2939881-2939958)
chr4 (102-154)||(17844847-17844899)
chr4 (52-154)||(19753540-19753648)
chr4 (52-154)||(19786158-19786266)
chr4 (131-167)||(47498424-47498460)
[»] chr8 (43 HSPs)
chr8 (79-167)||(12883782-12883870)
chr8 (78-167)||(11218892-11218981)
chr8 (25-167)||(9012829-9012972)
chr8 (79-169)||(10661094-10661184)
chr8 (84-164)||(24682147-24682227)
chr8 (79-167)||(33068208-33068296)
chr8 (102-170)||(44336711-44336779)
chr8 (77-167)||(15272356-15272446)
chr8 (77-167)||(15452725-15452815)
chr8 (79-164)||(22811225-22811310)
chr8 (84-164)||(14549169-14549249)
chr8 (78-167)||(31497660-31497749)
chr8 (87-167)||(4785178-4785258)
chr8 (29-168)||(18170021-18170161)
chr8 (25-172)||(19539320-19539468)
chr8 (78-165)||(30392083-30392170)
chr8 (117-172)||(40436373-40436428)
chr8 (86-156)||(11017018-11017088)
chr8 (79-166)||(33565898-33565987)
chr8 (79-168)||(18633640-18633729)
chr8 (78-167)||(30254182-30254271)
chr8 (27-149)||(7428432-7428555)
chr8 (79-167)||(36910383-36910471)
chr8 (115-170)||(1265582-1265637)
chr8 (115-170)||(37948519-37948574)
chr8 (79-168)||(8035984-8036073)
chr8 (115-168)||(43619616-43619669)
chr8 (79-164)||(44672734-44672819)
chr8 (115-167)||(6345773-6345825)
chr8 (102-170)||(28073266-28073334)
chr8 (115-167)||(31126838-31126890)
chr8 (68-164)||(37162680-37162776)
chr8 (79-169)||(3006624-3006714)
chr8 (87-148)||(45366269-45366330)
chr8 (21-167)||(3681876-3682017)
chr8 (115-167)||(4267842-4267894)
chr8 (131-170)||(4603114-4603153)
chr8 (131-170)||(32907424-32907463)
chr8 (130-172)||(11660959-11661001)
chr8 (79-167)||(5803298-5803386)
chr8 (79-163)||(6200905-6200989)
chr8 (120-164)||(11864012-11864056)
chr8 (104-164)||(30998155-30998215)
[»] chr2 (30 HSPs)
chr2 (25-169)||(41461022-41461172)
chr2 (52-167)||(12884473-12884589)
chr2 (79-167)||(44979821-44979909)
chr2 (34-167)||(27301485-27301624)
chr2 (87-169)||(12041649-12041731)
chr2 (25-165)||(28790450-28790596)
chr2 (79-167)||(42785681-42785769)
chr2 (79-170)||(5862683-5862774)
chr2 (51-167)||(15320597-15320719)
chr2 (79-168)||(17762683-17762772)
chr2 (67-167)||(12841488-12841589)
chr2 (102-169)||(19937199-19937266)
chr2 (79-169)||(17916903-17916993)
chr2 (79-164)||(44035251-44035337)
chr2 (79-167)||(44085431-44085520)
chr2 (79-167)||(36413692-36413780)
chr2 (135-170)||(9811330-9811365)
chr2 (118-164)||(25298342-25298388)
chr2 (111-169)||(36500713-36500771)
chr2 (52-171)||(1330948-1331073)
chr2 (118-167)||(18356846-18356895)
chr2 (115-164)||(21351880-21351929)
chr2 (79-167)||(16578578-16578666)
chr2 (124-167)||(16672493-16672536)
chr2 (84-138)||(36075371-36075425)
chr2 (117-170)||(42462233-42462286)
chr2 (125-169)||(13716446-13716490)
chr2 (131-167)||(18512065-18512101)
chr2 (28-76)||(20985896-20985944)
chr2 (22-62)||(42785618-42785658)
[»] scaffold0204 (2 HSPs)
scaffold0204 (25-166)||(25807-25953)
scaffold0204 (79-167)||(14465-14553)
[»] scaffold0029 (1 HSPs)
scaffold0029 (78-167)||(40636-40725)
[»] scaffold0059 (1 HSPs)
scaffold0059 (79-167)||(69592-69680)
[»] scaffold0013 (2 HSPs)
scaffold0013 (79-167)||(105972-106060)
scaffold0013 (79-167)||(128579-128667)
[»] scaffold0688 (2 HSPs)
scaffold0688 (102-149)||(1119-1166)
scaffold0688 (102-149)||(7688-7735)
[»] scaffold0308 (1 HSPs)
scaffold0308 (79-169)||(5935-6025)
[»] scaffold0015 (1 HSPs)
scaffold0015 (87-154)||(62355-62422)
[»] scaffold0396 (1 HSPs)
scaffold0396 (115-167)||(843-895)


Alignment Details
Target: chr1 (Bit Score: 173; Significance: 9e-93; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 173; E-Value: 9e-93
Query Start/End: Original strand, 52 - 295
Target Start/End: Original strand, 40095440 - 40095688
Alignment:
Q  52 gtttggtttgagttttattttaaaa-taaaccgaa-----ccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaacca 145  Q
    ||||||||||||||||||||||||| |||||||||     |||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||    
T  40095440 gtttggtttgagttttattttaaaaataaaccgaaacaagccaaaccgcatatttatttatcttgcggttcggataacttttaacctcaaaaccgaacca 40095539  T
Q  146 aaccgcaccgcgaacacccctaattttggggtagctgagagcaattttagaagtttaaagagcaannnnnnnatccaaatagattctagattgaggaaag 245  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||       ||||||||||||||||||||||||||||    
T  40095540 aaccgcaccgcgaacacccctaattttggggtagctgagagcaattttagaagtttaaagaacaatctttttatccaaatagattctagattgaggaaag 40095639  T
Q  246 accaatggctagtaagtaactagaaagttgctctataggccctcttggat 295  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  40095640 accaatggctagtaagtaactagaaagttgctctat-ggctctcttggat 40095688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 304 - 499
Target Start/End: Original strand, 40095752 - 40095947
Alignment:
Q  304 ccaatcggaagattattgtattcttgaaagnnnnnnnncgggacaattgaccgcagcaataaaactttacatggaacacaaatttttacccttccaacca 403  Q
    ||||||||||||||||||||||||||||||        |||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||    
T  40095752 ccaatcggaagattattgtattcttgaaagaaaaaaaacgggacaattgaccacagcaataaaactttatatggaacacaaaattttacccttccaacca 40095851  T
Q  404 ttattacatcatgtcattctgaatcatgtataacaataacaaacaacaattagtattattataaacttttatcatatattgagcaaacacgaaact 499  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  40095852 ttattacatcatgtcattctgaatcatggataacaataacaaacaacaattagtattattataaacttttatcatatattgagcaaacatgaaact 40095947  T

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Target: chr1; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 25 - 168
Target Start/End: Original strand, 25559987 - 25560137
Alignment:
Q  25 cgatccaatccaaaccgcattggttaagtttggtttgagt----tttattttaaaa-taaaccgaacc--aaaccgcatacttatttatcttacggttcg 117  Q
    ||||||||| |||||||||||||||  ||||||||||  |    |||||||||||| | |||||||||  ||||||||||||| ||||||||||||||||    
T  25559987 cgatccaattcaaaccgcattggttttgtttggtttggttcggatttattttaaaagtcaaccgaaccccaaaccgcatacttttttatcttacggttcg 25560086  T
Q  118 gatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaa 168  Q
     ||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  25560087 aatgacttttaacctcaaaatcgaaccaaaacgcaccgcgaacacccctaa 25560137  T

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Target: chr1; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 78 - 168
Target Start/End: Complemental strand, 12973591 - 12973501
Alignment:
Q  78 aaaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaa 168  Q
    ||||| |||||||||||||| ||||||||||| |||||||||||||||| | | |||||||||||||||||||||||||||||||||||||    
T  12973591 aaaccaaaccaaaccgcatatttatttatcttgcggttcggatgactttcagcttcaaaaccgaaccaaaccgcaccgcgaacacccctaa 12973501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 25 - 167
Target Start/End: Complemental strand, 50471317 - 50471169
Alignment:
Q  25 cgatccaatccaaaccgcattggttaagtttggtttgagttttattttaaaa------taaaccgaaccaaaccgcatacttatttatcttacggttcgg 118  Q
    ||||| |||| ||||||||||||||  ||||||||||  |||||||||||||      | |||| ||||||||||||||||| ||||| |||||||||||    
T  50471317 cgatctaatctaaaccgcattggtttggtttggtttggattttattttaaaatgcaactgaaccaaaccaaaccgcatacttttttattttacggttcgg 50471218  T
Q  119 atgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||||||||| | |||||| ||||| || |||||| |||||||||||||    
T  50471217 atgacttttagcatcaaaatcgaacaaacccgcactgcgaacaccccta 50471169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 84 - 164
Target Start/End: Original strand, 27507548 - 27507628
Alignment:
Q  84 aaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccc 164  Q
    |||||||  ||||||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  27507548 aaccaaattgcatacttatttatcttgcggttcggatgacttttattctcaaaaccgaaccaaaccgcaccgcgaacaccc 27507628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 87 - 167
Target Start/End: Original strand, 36203503 - 36203583
Alignment:
Q  87 caaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||||||||| ||| |||||||| ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  36203503 caaaccgcatgcttttttatcttgcggtttggatgacttttaacctcaaaaccgaaccaaatcgcaccgcgaacaccccta 36203583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 84 - 168
Target Start/End: Original strand, 35980444 - 35980528
Alignment:
Q  84 aaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaa 168  Q
    ||||||||| ||| ||| |||| ||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  35980444 aaccaaaccacatgcttttttaccttgcggttcggatgacttttagcctcaaaaccgaaccaaaccgcaccgcaaacacccctaa 35980528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 79 - 164
Target Start/End: Original strand, 2490080 - 2490165
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccc 164  Q
    |||| ||||||| |||||||||||||||||| |||||||||| ||||||| |||||||| |||||||||| ||||||| |||||||    
T  2490080 aaccaaaccaaatcgcatacttatttatcttgcggttcggataacttttagcctcaaaatcgaaccaaactgcaccgcaaacaccc 2490165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 88 - 171
Target Start/End: Original strand, 26345119 - 26345202
Alignment:
Q  88 aaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaattt 171  Q
    ||||||||||||| ||||| ||  |||||||||||||| |||||||||||| |||| ||||||||||||||| |||||||||||    
T  26345119 aaaccgcatacttttttattttttggttcggatgacttctaacctcaaaacggaactaaaccgcaccgcgaatacccctaattt 26345202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 84 - 165
Target Start/End: Complemental strand, 3935482 - 3935401
Alignment:
Q  84 aaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccc 165  Q
    ||||| || ||||||||||||||||||||||||  ||||||||||  ||||||| |||||||||||||||||| ||||||||    
T  3935482 aaccatactgcatacttatttatcttacggttcatatgacttttagtctcaaaatcgaaccaaaccgcaccgcaaacacccc 3935401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 78 - 167
Target Start/End: Complemental strand, 6248108 - 6248019
Alignment:
Q  78 aaaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    ||||| ||||||||||||||||||||| |||| ||||| ||||||||||||  ||||||| | || |||||||||| |||||||||||||    
T  6248108 aaaccaaaccaaaccgcatacttatttttcttgcggtttggatgacttttagtctcaaaatcaaatcaaaccgcactgcgaacaccccta 6248019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 78 - 166
Target Start/End: Complemental strand, 8268689 - 8268600
Alignment:
Q  78 aaaccgaaccaaaccgcatactta-tttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccct 166  Q
    ||||| |||||| ||||||| ||  |||||||| |||||| ||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  8268689 aaaccaaaccaacccgcatattttgtttatcttgcggttcagatgacttttagcctcaaaaccgaaccaaaccgcaccgcgtacacccct 8268600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 79 - 168
Target Start/End: Original strand, 16529552 - 16529641
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaa 168  Q
    |||| |||||||| |||| ||| |||||||  | ||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  16529552 aaccaaaccaaacggcatgcttttttatctcgcagtttggatgacttttatgctcaaaaccgaaccaaaccgcaccgcgaacacccctaa 16529641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 25 - 159
Target Start/End: Complemental strand, 18310090 - 18309951
Alignment:
Q  25 cgatccaatccaaaccgcattggttaagtttggtttgagttttattttaaaat------aaaccgaaccaaaccgcatacttatttatcttacggttcgg 118  Q
    |||||||| |||||||||||| |||  ||||||||||||||||||||||||||      ||||| ||||||| | |||  || |||||| | ||||||||    
T  18310090 cgatccaaaccaaaccgcatttgtttggtttggtttgagttttattttaaaattcaaccaaaccaaaccaaatcacatgtttttttatcatgcggttcgg 18309991  T
Q  119 atgacttttaacctcaaaaccgaaccaaaccgcaccgcgaa 159  Q
    |||||||||| ||| ||||| ||||| ||||||||||||||    
T  18309990 atgacttttatcctaaaaactgaacc-aaccgcaccgcgaa 18309951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 79 - 167
Target Start/End: Original strand, 8165603 - 8165691
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||||||||||||||||| ||| |||||| | |||||||||||| ||||| | ||||||| |||| |||||||||||| ||||||||||    
T  8165603 aaccgaaccaaaccgcatgcttctttatcctgcggttcggatgatttttaccttcaaaactgaactaaaccgcaccgcaaacaccccta 8165691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 79 - 167
Target Start/End: Original strand, 51252467 - 51252555
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||| ||||||||| ||| ||| |||||||  ||||| ||||||||||||  ||||||| |||||||||||||||||||||||||||||    
T  51252467 aaccaaaccaaaccacatgcttttttatctcgcggtttggatgacttttatgctcaaaatcgaaccaaaccgcaccgcgaacaccccta 51252555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 84 - 169
Target Start/End: Complemental strand, 16062888 - 16062803
Alignment:
Q  84 aaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaat 169  Q
    |||||||||  ||||||||| ||||||||||||  |||| |||||  |||||||||||||||||||||||  ||||||||||||||    
T  16062888 aaccaaaccagatacttattaatcttacggttcaaatgaattttattctcaaaaccgaaccaaaccgcacaacgaacacccctaat 16062803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 79 - 168
Target Start/End: Original strand, 21685594 - 21685683
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaa 168  Q
    |||| ||||||||||||| | | | |||||| |||||| ||||||||||| ||| ||||||||||||||| ||||||| |||||||||||    
T  21685594 aaccaaaccaaaccgcatgcatttgtatcttgcggttcagatgacttttagccttaaaaccgaaccaaactgcaccgcaaacacccctaa 21685683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 79 - 167
Target Start/End: Original strand, 11074451 - 11074538
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||| |||||||||| ||  || ||||||||| |||||||| |||||||| ||||||| | ||||||||||||||||||||||||||||    
T  11074451 aaccaaaccaaaccgtatgtttttttatcttaaggttcggaagacttttaccctcaaatc-gaaccaaaccgcaccgcgaacaccccta 11074538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 167
Target Start/End: Original strand, 52380718 - 52380862
Alignment:
Q  29 ccaatccaaaccgcattggttaagtttggtttgagttttattttaaaa-taaaccg-----aaccaaaccgcatacttatttatcttacggttcggatga 122  Q
    ||||||||||||||||| ||| |||||||||  | | ||||||||||| | |||||     |||||||||||||| |||| |||||| | ||||  ||||    
T  52380718 ccaatccaaaccgcattagtttagtttggttcaaatcttattttaaaagtcaaccgaactaaaccaaaccgcatagttatatatcttgcagttcatatga 52380817  T
Q  123 cttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||||| |||||| |||| |||||||| || ||||||||||||||    
T  52380818 cttttagcctcaataccgtaccaaaccacatcgcgaacaccccta 52380862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 79 - 166
Target Start/End: Complemental strand, 32954068 - 32953982
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccct 166  Q
    |||| ||||||||||||| ||| ||||||| | |||| ||||||||||||   ||||||||||||||||||||||| |||||||||||    
T  32954068 aaccaaaccaaaccgcatgcttttttatctca-ggtttggatgacttttatgttcaaaaccgaaccaaaccgcaccacgaacacccct 32953982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 78 - 164
Target Start/End: Original strand, 1161793 - 1161879
Alignment:
Q  78 aaaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccc 164  Q
    ||||| ||||||||| ||| ||| |||||||  |||||||||||||||||   |||||||||||||||||||||| ||| |||||||    
T  1161793 aaaccaaaccaaaccacatgcttttttatctcgcggttcggatgacttttctgctcaaaaccgaaccaaaccgcatcgcaaacaccc 1161879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 102 - 164
Target Start/End: Complemental strand, 17989055 - 17988993
Alignment:
Q  102 tttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccc 164  Q
    |||||||| || ||| ||||||||||| |||||||||||||||||||||||||| ||||||||    
T  17989055 tttatcttgcgattcagatgacttttagcctcaaaaccgaaccaaaccgcaccgtgaacaccc 17988993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 73 - 154
Target Start/End: Complemental strand, 44918584 - 44918503
Alignment:
Q  73 aaaataaaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcacc 154  Q
    ||||| |||||||||||||||||| ||| |||||||| | ||| || |||||||||  ||||||| ||||||||||||||||    
T  44918584 aaaatcaaccgaaccaaaccgcatgcttttttatcttgcagtttgggtgacttttatgctcaaaatcgaaccaaaccgcacc 44918503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 25 - 162
Target Start/End: Original strand, 9962139 - 9962282
Alignment:
Q  25 cgatccaatccaaaccgcattggttaagtttggtttgagttttattttaaaat------aaaccgaaccaaaccgcatacttatttatcttacggttcgg 118  Q
    |||||||| ||||||| ||||||||  ||||||||||| |||||||| ||||       ||| | ||| ||||||| |  || |||||||| || |||||    
T  9962139 cgatccaacccaaaccacattggtttggtttggtttgaattttatttgaaaagtcaaccaaatcaaacaaaaccgcctgtttttttatcttgcgattcgg 9962238  T
Q  119 atgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacac 162  Q
    ||||||||||   ||||||| |||||||||||||||||||||||    
T  9962239 atgacttttagtttcaaaactgaaccaaaccgcaccgcgaacac 9962282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 29 - 162
Target Start/End: Complemental strand, 11899097 - 11898958
Alignment:
Q  29 ccaatccaaaccgcattggttaagtttggtttgagtt------ttattttaaaataaaccgaaccaaaccgcatacttatttatcttacggttcggatga 122  Q
    ||||||||||||| ||||||| |||||||||||  ||      || ||| ||||| |||||||||||||| |||  || ||||||   ||||| ||||||    
T  11899097 ccaatccaaaccgtattggtttagtttggtttggtttggatgattttttaaaaatcaaccgaaccaaaccacatgtttttttatcgcgcggtttggatga 11898998  T
Q  123 cttttaacctcaaaaccgaaccaaaccgcaccgcgaacac 162  Q
    |||||   |||||||||||| |||||||||||||||||||    
T  11898997 cttttttgctcaaaaccgaatcaaaccgcaccgcgaacac 11898958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 87 - 167
Target Start/End: Complemental strand, 17651774 - 17651694
Alignment:
Q  87 caaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||||||||| ||| |||| |||||  |||| |||||||||| ||||||||||||| ||||||||| ||| ||||||||||    
T  17651774 caaaccgcatgcttttttaccttacaattcgaatgacttttagcctcaaaaccgaatcaaaccgcatcgcaaacaccccta 17651694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 84 - 163
Target Start/End: Complemental strand, 52828848 - 52828769
Alignment:
Q  84 aaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacc 163  Q
    |||||||| |||| |||  ||||||| |||||| |||||| |||||||| ||||||||||||||||  ||||||||||||    
T  52828848 aaccaaacagcatgctttgttatcttgcggttcagatgacctttaaccttaaaaccgaaccaaaccaaaccgcgaacacc 52828769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 78 - 156
Target Start/End: Complemental strand, 29389064 - 29388986
Alignment:
Q  78 aaaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgc 156  Q
    ||||| || |||||||||| ||| ||||||| |||||| |||||||||||   ||||||| ||||||||||||||||||    
T  29389064 aaaccaaatcaaaccgcatgcttttttatctcacggtttggatgacttttttgctcaaaatcgaaccaaaccgcaccgc 29388986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 73 - 167
Target Start/End: Original strand, 42789649 - 42789743
Alignment:
Q  73 aaaataaaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    ||||| ||| ||||||||| |||| ||| |||||||  ||||| | ||||||||||  || |||| || ||||||||||||||||||||||||||    
T  42789649 aaaatcaactgaaccaaactgcatgcttttttatctcgcggtttgaatgacttttatgcttaaaatcgtaccaaaccgcaccgcgaacaccccta 42789743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 79 - 164
Target Start/End: Original strand, 10847574 - 10847659
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccc 164  Q
    |||||||||||||| |||  || ||||||||  ||||| |||||||||||||||||||| | ||||||| |||||||  |||||||    
T  10847574 aaccgaaccaaaccacatgtttttttatcttgaggttcagatgacttttaacctcaaaatctaaccaaatcgcaccgtaaacaccc 10847659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 79 - 167
Target Start/End: Complemental strand, 27350689 - 27350598
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaacca---aaccgcaccgcgaacaccccta 167  Q
    |||| ||||||||||||||||||||||| |||| | |||||||| |||||  || |||| ||||| |   ||||||||||||||||||||||    
T  27350689 aaccaaaccaaaccgcatacttatttattttacagatcggatgatttttagtcttaaaatcgaactaattaaccgcaccgcgaacaccccta 27350598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 79 - 167
Target Start/End: Original strand, 39256688 - 39256776
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||| ||| ||||||||| ||| |||||||  | ||||| |||||||||   |||||||| ||||||||||||||| ||||||||||||    
T  39256688 aaccaaactaaaccgcatgcttttttatctcgcagttcgaatgacttttgtgctcaaaacagaaccaaaccgcaccacgaacaccccta 39256776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 84 - 163
Target Start/End: Complemental strand, 34914159 - 34914080
Alignment:
Q  84 aaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacc 163  Q
    |||||||| |||||||| ||||| |  | ||| ||||||||||| ||||||||| |||||||||| ||||| ||||||||    
T  34914159 aaccaaactgcatacttttttatttcgcagtttggatgacttttcacctcaaaatcgaaccaaactgcaccacgaacacc 34914080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 135 - 168
Target Start/End: Complemental strand, 20493723 - 20493690
Alignment:
Q  135 aaaccgaaccaaaccgcaccgcgaacacccctaa 168  Q
    ||||||||||||||||||||||||||||||||||    
T  20493723 aaaccgaaccaaaccgcaccgcgaacacccctaa 20493690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 102 - 167
Target Start/End: Complemental strand, 25532779 - 25532714
Alignment:
Q  102 tttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||||||| | |||| ||||||||||| ||||||| | ||| ||||||||| ||||||||||||||    
T  25532779 tttatcttgcagttcagatgacttttagcctcaaatctgaatcaaaccgcatcgcgaacaccccta 25532714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 79 - 164
Target Start/End: Original strand, 32910421 - 32910506
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccc 164  Q
    |||| |||||||| ||||  || |||||||| | ||| |||||||||||| |||||||||||||||||  | |||||| |||||||    
T  32910421 aaccaaaccaaactgcatgtttttttatcttgcagtttggatgacttttatcctcaaaaccgaaccaacacacaccgcaaacaccc 32910506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 29 - 171
Target Start/End: Complemental strand, 33474529 - 33474386
Alignment:
Q  29 ccaatccaaaccgcattggttaagtttggtttgagttttattttaaaataaaccgaaccaaac-----cgcatacttatttatcttacggttcggatgac 123  Q
    |||||||||||||||||||||  |||||| | || ||||   ||||||| |||||||||||||     ||||| ||| ||||||| || ||| ||||||     
T  33474529 ccaatccaaaccgcattggtttggtttggat-gactttt---ttaaaatcaaccgaaccaaactaaaccgcatgcttttttatctcacagtttggatgat 33474434  T
Q  124 ttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaattt 171  Q
    ||||   ||||||| |||||||||  ||||| ||||||||||||||||    
T  33474433 ttttttgctcaaaatcgaaccaaatagcaccacgaacacccctaattt 33474386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 84 - 165
Target Start/End: Complemental strand, 33769903 - 33769822
Alignment:
Q  84 aaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccc 165  Q
    ||||||||||||||| | |||||| || |||||||||||||||||    ||||| ||||||||| |||| ||| ||||||||    
T  33769903 aaccaaaccgcatacatttttatcatatggttcggatgacttttaggtccaaaatcgaaccaaatcgcaacgcaaacacccc 33769822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 115 - 167
Target Start/End: Original strand, 5559866 - 5559918
Alignment:
Q  115 tcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||| ||| |||| ||||||||||||| |||||||| ||||||||||||||||    
T  5559866 tcggttgatttttgacctcaaaaccgatccaaaccggaccgcgaacaccccta 5559918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 87 - 155
Target Start/End: Original strand, 6694428 - 6694496
Alignment:
Q  87 caaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccg 155  Q
    |||||| |||||||||||| ||| ||||||||||||  ||||  ||||||||||||| ||||| |||||    
T  6694428 caaaccacatacttatttaacttgcggttcggatgatgtttagtctcaaaaccgaactaaaccacaccg 6694496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 167
Target Start/End: Complemental strand, 8211309 - 8211221
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||| ||||||||||||| ||| ||| |||  ||||| |||||| | |||  ||  ||||| |||||||||||||||||||||||||||    
T  8211309 aaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccaaaccaaaccgcaccgcgaacaccccta 8211221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 90 - 170
Target Start/End: Complemental strand, 35375195 - 35375115
Alignment:
Q  90 accgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaatt 170  Q
    ||||||| ||| || ||||||||||||| || ||||||||||  ||||  ||||||||| | ||| |||||||||||||||    
T  35375195 accgcatgctttttaatcttacggttcgaataacttttaaccctaaaattgaaccaaactgtaccacgaacacccctaatt 35375115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 115 - 171
Target Start/End: Complemental strand, 41198127 - 41198071
Alignment:
Q  115 tcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaattt 171  Q
    |||| |||| ||| ||||||||| ||| |||||| ||||||||||||||||||||||    
T  41198127 tcggttgacattttacctcaaaatcgatccaaactgcaccgcgaacacccctaattt 41198071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 84 - 170
Target Start/End: Complemental strand, 9330412 - 9330326
Alignment:
Q  84 aaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaatt 170  Q
    ||||||||| ||||||| |||||||   |||||  |||||| ||| |||  |||  |||||||||||||| ||||||||||||||||    
T  9330412 aaccaaaccacatacttttttatctcgtggttcatatgactattagcctgtaaaatgaaccaaaccgcactgcgaacacccctaatt 9330326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 115 - 169
Target Start/End: Original strand, 14462178 - 14462232
Alignment:
Q  115 tcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaat 169  Q
    |||| ||| |||||||||||||||||| |||||||  ||||| ||||||||||||    
T  14462178 tcggttgatttttaacctcaaaaccgatccaaaccagaccgcaaacacccctaat 14462232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 84 - 146
Target Start/End: Original strand, 35980325 - 35980387
Alignment:
Q  84 aaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaa 146  Q
    ||||||||| ||| ||| |||| ||| |||||||||||||||||| ||| ||||||| |||||    
T  35980325 aaccaaaccacatgcttttttaccttgcggttcggatgacttttagcctaaaaaccgcaccaa 35980387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 156
Target Start/End: Complemental strand, 24629994 - 24629901
Alignment:
Q  64 ttttattttaaaa-taaaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgc 156  Q
    ||||||||||||| | |||| ||||||||| ||| ||| |||||| | || || || |||||||||  ||||||||| | ||||||||||||||    
T  24629994 ttttattttaaaagtcaaccaaaccaaaccacatgcttttttatcatgcgatttggctgacttttagtctcaaaaccaacccaaaccgcaccgc 24629901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 135 - 167
Target Start/End: Original strand, 5155451 - 5155483
Alignment:
Q  135 aaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    ||||| |||||||||||||||||||||||||||    
T  5155451 aaaccaaaccaaaccgcaccgcgaacaccccta 5155483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 85; Significance: 3e-40; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 25 - 164
Target Start/End: Original strand, 31945421 - 31945561
Alignment:
Q  25 cgatccaatccaaaccgcattggttaagtttggtttgagttttattttaaaa-taaaccgaaccaaaccgcatacttatttatcttacggttcggatgac 123  Q
    ||||||||||||||||||||||| |  ||||| |||   ||||||||||||| | |||||||||||| ||||||||| ||||||||||||||||||||||    
T  31945421 cgatccaatccaaaccgcattggattggtttgattttgattttattttaaaagtcaaccgaaccaaaacgcatacttttttatcttacggttcggatgac 31945520  T
Q  124 ttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccc 164  Q
    ||||||||||||||||||| |||||| ||||||||||||||    
T  31945521 ttttaacctcaaaaccgaaacaaaccacaccgcgaacaccc 31945561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 84 - 166
Target Start/End: Original strand, 24645009 - 24645091
Alignment:
Q  84 aaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccct 166  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||  |||||||||||    
T  24645009 aaccaaaccgcatacttatttatcttgcggttcggatgacttttaacctcaaaatcgaaccaaaccgcacaacgaacacccct 24645091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 79 - 167
Target Start/End: Complemental strand, 22413868 - 22413780
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||||| || ||||| ||||| ||||||||||||    
T  22413868 aaccaaaccaaaccgcatacttatttatcttctggttcggatgacttttaacctcaaaaccaaatcaaactgcacctcgaacaccccta 22413780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 78 - 167
Target Start/End: Original strand, 35040261 - 35040350
Alignment:
Q  78 aaaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    ||||| ||||||||||||| ||| |||||||  ||||| ||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  35040261 aaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaaccaaaccgcaccgcgaacaccccta 35040350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 79 - 167
Target Start/End: Complemental strand, 9686088 - 9686000
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||| |||||||||||||||||||||||||| |||||| ||||||||| | |||||||| |||||||||| ||| ||||||||||||||    
T  9686088 aaccaaaccaaaccgcatacttatttatcttgcggttcagatgactttgagcctcaaaatcgaaccaaactgcatcgcgaacaccccta 9686000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 84 - 167
Target Start/End: Complemental strand, 6266929 - 6266846
Alignment:
Q  84 aaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||||||||||||  || ||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||    
T  6266929 aaccaaaccgcatgtttttttattttacggttcggatgactattaacctcaaaaccgtaccaaaccgcaccgcgaacactccta 6266846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 103 - 167
Target Start/End: Complemental strand, 8135442 - 8135378
Alignment:
Q  103 ttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    ||||||| |||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  8135442 ttatcttgcggttcggatgacttttagcctcaaaaccgaaccaaaacgcaccgcgaacaccccta 8135378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 79 - 163
Target Start/End: Original strand, 26645436 - 26645520
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacc 163  Q
    |||| |||||||||||||| || |||| ||||||||||||||||||||||||||||||||| ||| ||||| ||||| |||||||    
T  26645436 aaccaaaccaaaccgcatatttttttaccttacggttcggatgacttttaacctcaaaaccaaactaaacctcaccgtgaacacc 26645520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 79 - 163
Target Start/End: Original strand, 26751402 - 26751486
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacc 163  Q
    |||| |||||||||||||| || |||| ||||||||||||||||||||||||||||||||| ||| ||||| ||||| |||||||    
T  26751402 aaccaaaccaaaccgcatatttttttaccttacggttcggatgacttttaacctcaaaaccaaactaaacctcaccgtgaacacc 26751486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 79 - 170
Target Start/End: Complemental strand, 29048157 - 29048066
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaatt 170  Q
    |||| ||||||| |||| || | |||| |||| |||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  29048157 aaccaaaccaaatcgcacacctttttaccttatggtttggatgacttttaaccttaaaaccgaaccaaaccgcaccgcgaacatccctaatt 29048066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 84 - 166
Target Start/End: Complemental strand, 13092030 - 13091948
Alignment:
Q  84 aaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccct 166  Q
    |||||||||  |||||||||||||||||||||||||||||| |||| ||||||| |||| ||||| ||||| |||||||||||    
T  13092030 aaccaaaccatatacttatttatcttacggttcggatgactattaatctcaaaatcgaatcaaactgcaccacgaacacccct 13091948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 79 - 168
Target Start/End: Original strand, 10391074 - 10391163
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaa 168  Q
    |||| |||||||| |||| ||| |||||||  ||||||| ||||||||||  ||||||||||||||||||| ||||||||||||||||||    
T  10391074 aaccaaaccaaacagcatgcttttttatctcgcggttcgaatgacttttatgctcaaaaccgaaccaaaccacaccgcgaacacccctaa 10391163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 79 - 167
Target Start/End: Complemental strand, 10590881 - 10590793
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||| ||||||||||||| ||| |||||||  | ||| ||||||||||||  |||||||||||||||||||||||||||| ||||||||    
T  10590881 aaccaaaccaaaccgcatgcttttttatctcgcagtttggatgacttttatgctcaaaaccgaaccaaaccgcaccgcgaccaccccta 10590793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 102 - 168
Target Start/End: Complemental strand, 20500572 - 20500506
Alignment:
Q  102 tttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaa 168  Q
    |||||||| |||||||  ||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  20500572 tttatcttgcggttcgagtgacttttaccctcaaaaccaaaccaaaccgcaccgcgaacacccctaa 20500506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 84 - 169
Target Start/End: Complemental strand, 15859751 - 15859666
Alignment:
Q  84 aaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaat 169  Q
    ||||||||||||| ||| || ||||  ||||| ||| ||||||||  |||||||||||||||||| ||||||||||||||||||||    
T  15859751 aaccaaaccgcatgctttttaatctcgcggtttggaagacttttatgctcaaaaccgaaccaaacggcaccgcgaacacccctaat 15859666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 79 - 163
Target Start/End: Original strand, 892393 - 892477
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacc 163  Q
    |||| |||||||||||||  || ||||| || |||||||||||||||||| ||| ||||  ||||||||||||||||||||||||    
T  892393 aaccaaaccaaaccgcatgtttttttattttgcggttcggatgacttttagccttaaaattgaaccaaaccgcaccgcgaacacc 892477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 36 - 168
Target Start/End: Original strand, 13859386 - 13859524
Alignment:
Q  36 aaaccgcattggttaagtttggtttgagttttattttaaa-ataaaccgaaccaaaccg-----catacttatttatcttacggttcggatgacttttaa 129  Q
    |||||||||||||| ||||||||||||||||| |||||||  | |||| ||||||| ||     ||| ||| ||||| || |||||||||| | ||||||    
T  13859386 aaaccgcattggtttagtttggtttgagtttttttttaaacgtcaaccaaaccaaatcgaaacacatgcttttttattttgcggttcggataatttttaa 13859485  T
Q  130 cctcaaaaccgaaccaaaccgcaccgcgaacacccctaa 168  Q
    |||||||| | |||||||||||| ||| |||||| ||||    
T  13859486 cctcaaaatcaaaccaaaccgcatcgcaaacacctctaa 13859524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 79 - 172
Target Start/End: Original strand, 5287956 - 5288049
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaatttt 172  Q
    |||| |||||||| ||||  ||||||||||  | ||| |||||||||  |  ||||||||||||||||||||||||||||||||| ||||||||    
T  5287956 aaccaaaccaaactgcatgtttatttatctcgcagtttggatgacttaaatgctcaaaaccgaaccaaaccgcaccgcgaacacctctaatttt 5288049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 87 - 168
Target Start/End: Original strand, 10494441 - 10494522
Alignment:
Q  87 caaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaa 168  Q
    |||||| ||| ||| |||||||  ||||| ||||||||||||  ||||||||| |||||||||||||||| |||||||||||    
T  10494441 caaaccccatgcttttttatctcgcggtttggatgacttttatgctcaaaaccaaaccaaaccgcaccgcaaacacccctaa 10494522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 79 - 163
Target Start/End: Original strand, 19135164 - 19135249
Alignment:
Q  79 aaccgaaccaaaccgcatacttattt-atcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacc 163  Q
    |||| |||||||||||||| || ||| | ||| |||||| ||||||||||  |||||||||||||||||||| |||||||||||||    
T  19135164 aaccaaaccaaaccgcatattttttttacctttcggttcagatgactttttgcctcaaaaccgaaccaaaccacaccgcgaacacc 19135249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 79 - 167
Target Start/End: Original strand, 13810921 - 13811009
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||| |||||||||| || ||| |||||||  ||||| |||||||||||   ||||||||| ||||||||| |||||||||||||||||    
T  13810921 aaccaaaccaaaccgtatgcttttttatctcgcggtttggatgacttttttgctcaaaaccaaaccaaacctcaccgcgaacaccccta 13811009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 79 - 167
Target Start/End: Original strand, 5874204 - 5874292
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||| ||||||||||||| ||| ||| |||  ||||| |||||| | |||  ||  |||||||||||||||||||||||||||||||||    
T  5874204 aaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaaccgcaccgcgaacaccccta 5874292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 115 - 167
Target Start/End: Complemental strand, 7607912 - 7607860
Alignment:
Q  115 tcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||| ||| |||||||||||||||||| |||||||| ||||||||||||||||    
T  7607912 tcggttgatttttaacctcaaaaccgatccaaaccggaccgcgaacaccccta 7607860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 135 - 171
Target Start/End: Complemental strand, 12270531 - 12270495
Alignment:
Q  135 aaaccgaaccaaaccgcaccgcgaacacccctaattt 171  Q
    |||||||||||||||||||||||||||||||||||||    
T  12270531 aaaccgaaccaaaccgcaccgcgaacacccctaattt 12270495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 112 - 167
Target Start/End: Original strand, 13532366 - 13532422
Alignment:
Q  112 ggttcggatgac-ttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||||||||||| ||||| ||| ||||||||||||||||||||||| ||||||||||    
T  13532366 ggttcggatgaccttttacccttaaaaccgaaccaaaccgcaccgcaaacaccccta 13532422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 115 - 167
Target Start/End: Complemental strand, 16704994 - 16704942
Alignment:
Q  115 tcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||| ||| |||||||||||||||||| |||||||| ||||||||||||||||    
T  16704994 tcggttgatttttaacctcaaaaccgatccaaaccggaccgcgaacaccccta 16704942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 79 - 147
Target Start/End: Original strand, 25006383 - 25006451
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaa 147  Q
    |||| |||||| || ||||||| ||||||||||||||  |||||| |||||||||||||||||| ||||    
T  25006383 aaccaaaccaacccacatacttttttatcttacggttaagatgacatttaacctcaaaaccgaatcaaa 25006451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 79 - 167
Target Start/End: Complemental strand, 25136802 - 25136714
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||| |||| |||||||| ||| ||||| | || ||| |||| |||| ||  ||||||||||||||||||||||||| |||||||||||    
T  25136802 aaccaaaccgaaccgcatgcttttttatttcactgtttggatcacttgtatgctcaaaaccgaaccaaaccgcaccgtgaacaccccta 25136714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 115 - 167
Target Start/End: Original strand, 30396041 - 30396093
Alignment:
Q  115 tcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||| |||||||| ||||||||||||| |||||||| ||||||||||||||||    
T  30396041 tcggttgactttttacctcaaaaccgatccaaaccggaccgcgaacaccccta 30396093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 78 - 156
Target Start/End: Complemental strand, 11417087 - 11417008
Alignment:
Q  78 aaaccgaaccaaaccgcatacttattt-atcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgc 156  Q
    ||||| || ||||| |||||||| ||| | |||||||||||||||| ||||| ||| |||| ||||||||||||||||||    
T  11417087 aaaccaaatcaaacagcatacttttttcagcttacggttcggatgaattttagcctaaaaatcgaaccaaaccgcaccgc 11417008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 139
Target Start/End: Complemental strand, 30752561 - 30752501
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaacc 139  Q
    |||| ||||||||||||| ||| |||||||| |||||| |||||||||| | |||||||||    
T  30752561 aaccaaaccaaaccgcatgcttttttatcttgcggttcagatgacttttcatctcaaaacc 30752501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 117 - 168
Target Start/End: Complemental strand, 10484015 - 10483964
Alignment:
Q  117 ggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaa 168  Q
    ||||||| ||| ||||||||||||| |||||||||||| | |||||||||||    
T  10484015 ggatgacattttacctcaaaaccgatccaaaccgcaccacaaacacccctaa 10483964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 84 - 147
Target Start/End: Original strand, 32190727 - 32190790
Alignment:
Q  84 aaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaa 147  Q
    ||||||||| |||  || |||||| |||||||| ||||||||||| |||||||| |||||||||    
T  32190727 aaccaaacctcatgtttttttatcatacggttcagatgacttttagcctcaaaatcgaaccaaa 32190790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 172
Target Start/End: Complemental strand, 33550318 - 33550257
Alignment:
Q  111 cggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaatttt 172  Q
    ||||| ||||||||||||  |||||||||||| ||||||||| |   |||||||||||||||    
T  33550318 cggtttggatgacttttatgctcaaaaccgaatcaaaccgcatcataaacacccctaatttt 33550257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 162
Target Start/End: Complemental strand, 28610624 - 28610564
Alignment:
Q  102 tttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacac 162  Q
    ||||||||||| ||| ||||| |||||  || |||||||||||||||||||| || |||||    
T  28610624 tttatcttacgattcagatgatttttactcttaaaaccgaaccaaaccgcactgctaacac 28610564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 80; Significance: 3e-37; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 8568606 - 8568689
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacac 162  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8568606 aaccgaaccaaaccgcatacttatttatcttgcggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacac 8568689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 84 - 167
Target Start/End: Original strand, 32942136 - 32942219
Alignment:
Q  84 aaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||||||||||||  || |||||||| | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  32942136 aaccaaaccgcatgtttttttatcttgcagttcggatgacttttaacctcaaaaccgaaccaaactgcaccgcgaacaccccta 32942219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 87 - 167
Target Start/End: Complemental strand, 29628130 - 29628050
Alignment:
Q  87 caaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    ||||||||||  || |||| ||| ||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||    
T  29628130 caaaccgcatgtttttttaccttgcggttcggataccttttcacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 29628050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 79 - 163
Target Start/End: Original strand, 31287831 - 31287915
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacc 163  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||| ||| |||||||| | |||||| | ||||| ||||||||    
T  31287831 aaccaaaccaaaccgcatacttatttatcttacggttcagatgactattagcctcaaaatcaaaccaagctgcaccacgaacacc 31287915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 79 - 164
Target Start/End: Complemental strand, 40848881 - 40848796
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccc 164  Q
    |||| |||||||||| ||  || |||| |||||  |||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  40848881 aaccaaaccaaaccgtatgtttttttaccttacaattcgaatgacttttaccctcaaaaccgaaccaaaccgcaccgcgaacaccc 40848796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 79 - 167
Target Start/End: Original strand, 27054784 - 27054872
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||| ||||||||||||| ||| |||||||  ||||| |||||||||||   ||||||||| |||||||||||||||| ||||||||||    
T  27054784 aaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttttgctcaaaaccaaaccaaaccgcaccgcaaacaccccta 27054872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 84 - 167
Target Start/End: Original strand, 18673247 - 18673330
Alignment:
Q  84 aaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    ||||||| | ||| ||| |||||||  ||||| ||||||||||||  ||||||||||||||||| |||||||||||||||||||    
T  18673247 aaccaaatcacatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaaccaaatcgcaccgcgaacaccccta 18673330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 25 - 153
Target Start/End: Complemental strand, 23032769 - 23032630
Alignment:
Q  25 cgatccaatccaaaccgcattggttaagtttggtttg-----agttttattttaaaa-taaaccgaaccaaac-----cgcatacttatttatcttacgg 113  Q
    |||||||||||||||| ||||||||  ||||||||||     | ||||||||||||| | |||||||||||||     | ||||||| |||||||| |||    
T  23032769 cgatccaatccaaacctcattggtttggtttggtttggttcaaattttattttaaaagtcaaccgaaccaaactaaaccacatacttttttatctttcgg 23032670  T
Q  114 ttcggatgacttttaacctcaaaaccgaaccaaaccgcac 153  Q
    ||| ||||||||||| |||||| || ||||||||||||||    
T  23032669 ttcagatgacttttagcctcaacactgaaccaaaccgcac 23032630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 79 - 164
Target Start/End: Original strand, 31876682 - 31876766
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccc 164  Q
    ||||||||||||| |||| ||| ||||| |  ||||| ||||||||||||  |||||||||||| |||||||||||||||||||||    
T  31876682 aaccgaaccaaactgcatgcttttttatttcgcggtttggatgacttttatgctcaaaaccgaa-caaaccgcaccgcgaacaccc 31876766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 102 - 167
Target Start/End: Original strand, 45898135 - 45898200
Alignment:
Q  102 tttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||||||  ||||| ||||||||||||  | |||||||||||||||||||||||||||||||||||    
T  45898135 tttatctcgcggtttggatgacttttatgcacaaaaccgaaccaaaccgcaccgcgaacaccccta 45898200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 79 - 167
Target Start/End: Complemental strand, 5932726 - 5932638
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||| ||||||||||||| |||  ||||||  |||||| |||||||||||  |||||||||||| ||||||||||||| |||| |||||    
T  5932726 aaccaaaccaaaccgcatgctttcttatctcgcggttcagatgacttttatgctcaaaaccgaatcaaaccgcaccgcaaacatcccta 5932638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 79 - 167
Target Start/End: Original strand, 7209321 - 7209409
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||| |||||||||| || ||| |||||||   |||| ||||||||||||   |||||||||||||||||||||| |||||||||||||    
T  7209321 aaccaaaccaaaccgtatgcttttttatctcgtggtttggatgacttttatattcaaaaccgaaccaaaccgcactgcgaacaccccta 7209409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 73 - 165
Target Start/End: Complemental strand, 7760141 - 7760049
Alignment:
Q  73 aaaataaaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccc 165  Q
    ||||| |||| |||||||| | |||||| ||||||| || ||| |||||| |||||  ||||||| ||||||||||| |||||||||||||||    
T  7760141 aaaatcaaccaaaccaaactggatacttttttatctcacagtttggatgatttttatgctcaaaatcgaaccaaaccacaccgcgaacacccc 7760049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 79 - 167
Target Start/End: Complemental strand, 13852339 - 13852251
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||| ||||||||||||| ||| |||||||  | ||| ||||||||||||  ||||||||||||||||||| ||| || ||||||||||    
T  13852339 aaccaaaccaaaccgcatgcttttttatctcgcagtttggatgacttttatgctcaaaaccgaaccaaaccacactgcaaacaccccta 13852251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 84 - 167
Target Start/End: Original strand, 30079644 - 30079732
Alignment:
Q  84 aaccaaaccgcatacttatttatcttacggttcggatgacttttaacctca-----aaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    ||||||||||||| ||| ||||||||||| ||||||||||||||| | |||     ||||| ||||||||||||||| |||||||||||    
T  30079644 aaccaaaccgcatgcttttttatcttacgattcggatgacttttaccttcaaaatcaaaccaaaccaaaccgcaccgggaacaccccta 30079732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 79 - 167
Target Start/End: Original strand, 31983048 - 31983135
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||| |||||||| ||||| || |||||||  ||||| |||| |||||||  |||||||||||||| ||||||||||||||||||||||    
T  31983048 aaccaaaccaaactgcatatttttttatctcgcggtttggataacttttatgctcaaaaccgaacc-aaccgcaccgcgaacaccccta 31983135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 84 - 167
Target Start/End: Original strand, 524923 - 525006
Alignment:
Q  84 aaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||||||||||||| || |||||||| |||||| ||| ||||||| ||| ||||  ||||||||| |||||| |||||||||||    
T  524923 aaccaaaccgcatatttttttatcttgcggttcagataacttttagccttaaaaatgaaccaaactgcaccgtgaacaccccta 525006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 79 - 166
Target Start/End: Original strand, 11834551 - 11834638
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccct 166  Q
    |||| ||||||||||||||||||||||||||   |||||||| |||||||  | || ||||||||||||||||||  | |||||||||    
T  11834551 aaccaaaccaaaccgcatacttatttatcttgtagttcggataacttttaggcacacaaccgaaccaaaccgcacttcaaacacccct 11834638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 103 - 154
Target Start/End: Original strand, 26215200 - 26215251
Alignment:
Q  103 ttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcacc 154  Q
    ||||||| ||||| ||||||||||||||||||||||| ||||||||||||||    
T  26215200 ttatcttgcggtttggatgacttttaacctcaaaaccaaaccaaaccgcacc 26215251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 79 - 170
Target Start/End: Complemental strand, 47069699 - 47069608
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaatt 170  Q
    |||| ||||||||||||| ||| ||| |||  ||||| |||||| | |||  ||  ||||||||||||||||||||||||||||||||||||    
T  47069699 aaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaaccgcaccgcgaacacccctaatt 47069608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 79 - 170
Target Start/End: Original strand, 47204509 - 47204600
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaatt 170  Q
    |||| ||||||||||||| ||| ||| |||  ||||| |||||| | |||  ||  ||||||||||||||||||||||||||||||||||||    
T  47204509 aaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattgttatgcttgaaaccgaaccaaaccgcaccgcgaacacccctaatt 47204600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 115 - 168
Target Start/End: Original strand, 1576320 - 1576373
Alignment:
Q  115 tcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaa 168  Q
    |||| ||| |||||||||||||||||| |||||||| |||||||||||||||||    
T  1576320 tcggttgatttttaacctcaaaaccgatccaaaccggaccgcgaacacccctaa 1576373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 79 - 168
Target Start/End: Original strand, 8769015 - 8769104
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaa 168  Q
    |||| ||||||||||||| ||| ||| |||  ||||| |||||| | |||  ||  ||||||||||||||||||||||||||||||||||    
T  8769015 aaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatacttgaaaccgaaccaaaccgcaccgcgaacacccctaa 8769104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 95 - 172
Target Start/End: Original strand, 10338879 - 10338955
Alignment:
Q  95 atacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaatttt 172  Q
    |||||||||||| || | ||| |||||||||| | |||||||||| |||||||| |||||||||||||||||| ||||    
T  10338879 atacttatttattttgcagtttggatgacttt-accctcaaaaccaaaccaaactgcaccgcgaacacccctattttt 10338955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 102 - 163
Target Start/End: Complemental strand, 11399125 - 11399064
Alignment:
Q  102 tttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacc 163  Q
    |||||||| |||||||||||| ||||| |||||||| |||||||||| ||| ||||||||||    
T  11399125 tttatcttgcggttcggatgaattttagcctcaaaagcgaaccaaacagcatcgcgaacacc 11399064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 102 - 167
Target Start/End: Original strand, 29211723 - 29211788
Alignment:
Q  102 tttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||||||| | ||||| |||| ||||| ||| |||||||||||||| |||||||||||||||||||    
T  29211723 tttatcttgcagttcgaatgagttttagccttaaaaccgaaccaaatcgcaccgcgaacaccccta 29211788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 78 - 167
Target Start/End: Complemental strand, 34751019 - 34750930
Alignment:
Q  78 aaaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    ||||| |||||| |||||||||| | ||| || || |||| |||||||||| ||| ||||| ||||||||||||| || |||||||||||    
T  34751019 aaaccaaaccaacccgcatacttttatatattgcgattcgaatgacttttagcctaaaaactgaaccaaaccgcatcgtgaacaccccta 34750930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 79 - 156
Target Start/End: Complemental strand, 47903278 - 47903201
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgc 156  Q
    |||| ||||||||||||| ||| |||||||  ||||| |||||| |||||  || |||||||||||||||||||||||    
T  47903278 aaccaaaccaaaccgcatgcttttttatctcgcggtttggatgatttttatgcttaaaaccgaaccaaaccgcaccgc 47903201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 79 - 167
Target Start/End: Original strand, 3213274 - 3213362
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||| ||||||||||||| ||| ||| |||  ||||| |||||| | |||  ||  |||||||||||||||||||||||||||||||||    
T  3213274 aaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaaccgcaccgcgaacaccccta 3213362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 79 - 167
Target Start/End: Complemental strand, 10671851 - 10671763
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||| ||||||||||||| ||| ||| |||  ||||| |||||| | |||  ||  |||||||||||||||||||||||||||||||||    
T  10671851 aaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaaccgcaccgcgaacaccccta 10671763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 84 - 167
Target Start/End: Original strand, 2409023 - 2409106
Alignment:
Q  84 aaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||||||||||||  || ||||||| |||||| ||||||||||||  |||||||   ||||||||||||| ||||| |||||||    
T  2409023 aaccaaaccgcatggttttttatctcacggtttggatgacttttatgctcaaaattaaaccaaaccgcactgcgaataccccta 2409106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 79 - 150
Target Start/End: Original strand, 8118332 - 8118403
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccg 150  Q
    |||| ||||||||| ||| ||| |||||||| |||||||||| | ||||| ||||||||| |||||||||||    
T  8118332 aaccaaaccaaaccacatgcttttttatcttgcggttcggataaattttaccctcaaaacagaaccaaaccg 8118403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 118 - 161
Target Start/End: Complemental strand, 10069185 - 10069142
Alignment:
Q  118 gatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaaca 161  Q
    |||||||||||  |||||||||||||||||||||||||||||||    
T  10069185 gatgacttttatgctcaaaaccgaaccaaaccgcaccgcgaaca 10069142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 135 - 169
Target Start/End: Original strand, 11206466 - 11206500
Alignment:
Q  135 aaaccgaaccaaaccgcaccgcgaacacccctaat 169  Q
    |||||||||||||||||||||||||||||||||||    
T  11206466 aaaccgaaccaaaccgcaccgcgaacacccctaat 11206500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 84 - 150
Target Start/End: Complemental strand, 23729413 - 23729347
Alignment:
Q  84 aaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccg 150  Q
    ||||||||||||| ||| |||||||| |||||||||||| ||||| | ||||||  |||||||||||    
T  23729413 aaccaaaccgcatgcttttttatcttgcggttcggatgatttttagcatcaaaattgaaccaaaccg 23729347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 20334614 - 20334565
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgactttta 128  Q
    |||| |||||||||||||| ||||||||||| ||||||||| ||||||||    
T  20334614 aaccaaaccaaaccgcatatttatttatcttgcggttcggacgactttta 20334565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 2661789 - 2661857
Alignment:
Q  102 tttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaatt 170  Q
    |||||||||||| || ||| |||||||  ||||||| | || |||||||||||||||||||| ||||||    
T  2661789 tttatcttacggatcagataacttttagtctcaaaatcaaatcaaaccgcaccgcgaacacctctaatt 2661857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 87 - 167
Target Start/End: Original strand, 7205938 - 7206018
Alignment:
Q  87 caaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    ||||||||||  || |||||||  ||||| ||||||||| ||   |||||||||||||||||| ||| |||||||||||||    
T  7205938 caaaccgcatgtttttttatctcgcggtttggatgacttctatgttcaaaaccgaaccaaaccacactgcgaacaccccta 7206018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 84 - 172
Target Start/End: Complemental strand, 43908701 - 43908613
Alignment:
Q  84 aaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaatttt 172  Q
    ||||| ||||| || || |||||| ||||||| | |||||||||||| || |||| ||| ||||| ||||||| ||||||| |||||||    
T  43908701 aaccagaccgcgtatttttttatcatacggtttgaatgacttttaacttcgaaactgaatcaaactgcaccgcaaacacccataatttt 43908613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 117 - 164
Target Start/End: Complemental strand, 1335311 - 1335264
Alignment:
Q  117 ggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccc 164  Q
    ||||||||||||  |||||||||||||||||| ||| |||||||||||    
T  1335311 ggatgacttttatgctcaaaaccgaaccaaactgcaacgcgaacaccc 1335264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 88 - 163
Target Start/End: Original strand, 16535804 - 16535879
Alignment:
Q  88 aaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacc 163  Q
    |||||||||  || |||| ||| ||||| | |||||||||| |||||||| ||||| |||| ||||||||||||||    
T  16535804 aaaccgcatgtttttttaacttgcggtttgcatgacttttagcctcaaaatcgaactaaactgcaccgcgaacacc 16535879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 88 - 163
Target Start/End: Complemental strand, 16629858 - 16629783
Alignment:
Q  88 aaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacc 163  Q
    |||||||||  || |||| ||| ||||| | |||||||||| |||||||| ||||| |||| ||||||||||||||    
T  16629858 aaaccgcatgtttttttaacttgcggtttgcatgacttttagcctcaaaatcgaactaaactgcaccgcgaacacc 16629783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 124 - 167
Target Start/End: Original strand, 27393070 - 27393113
Alignment:
Q  124 ttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||||||||||||||||| | |||||| ||||||||||||||||    
T  27393070 ttttaacctcaaaaccgatctaaaccggaccgcgaacaccccta 27393113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 113 - 167
Target Start/End: Original strand, 4153813 - 4153867
Alignment:
Q  113 gttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    ||||| |||||||||| ||||||||| ||| ||||||||||||  ||||||||||    
T  4153813 gttcgaatgacttttagcctcaaaactgaatcaaaccgcaccgtaaacaccccta 4153867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 78 - 148
Target Start/End: Original strand, 21237832 - 21237902
Alignment:
Q  78 aaaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaac 148  Q
    ||||| |||||||||||||  || |||||||||  ||| |||| | |||||||||||||||| ||||||||    
T  21237832 aaaccaaaccaaaccgcattattttttatcttatagtttggataatttttaacctcaaaaccaaaccaaac 21237902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 156
Target Start/End: Original strand, 24361546 - 24361622
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgc 156  Q
    |||| ||||||||| |||  || ||||||| ||||||  ||||||||||  | |||||||||||||||||||||||||    
T  24361546 aaccaaaccaaaccacatgtttttttatctcacggtttagatgacttttttc-tcaaaaccgaaccaaaccgcaccgc 24361622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 144
Target Start/End: Complemental strand, 48642810 - 48642745
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaacc 144  Q
    |||| |||||||||||||  || || ||||| |||||| ||||| ||||| |||||||||||||||    
T  48642810 aaccaaaccaaaccgcatgttttttaatcttgcggttcagatgaattttaccctcaaaaccgaacc 48642745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 131 - 167
Target Start/End: Complemental strand, 323195 - 323159
Alignment:
Q  131 ctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    ||||||||||| |||||||| ||||||||||||||||    
T  323195 ctcaaaaccgatccaaaccggaccgcgaacaccccta 323159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 103 - 163
Target Start/End: Original strand, 6880182 - 6880241
Alignment:
Q  103 ttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacc 163  Q
    ||||||| | |||||||| | ||||||||||||| | |||| |||||||||||||||||||    
T  6880182 ttatcttgccgttcggataatttttaacctcaaatc-gaactaaaccgcaccgcgaacacc 6880241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 130 - 170
Target Start/End: Original strand, 7137992 - 7138032
Alignment:
Q  130 cctcaaaaccgaaccaaaccgcaccgcgaacacccctaatt 170  Q
    ||||| |||||| || |||||||||||||||||||||||||    
T  7137992 cctcataaccgagccgaaccgcaccgcgaacacccctaatt 7138032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 131 - 167
Target Start/End: Original strand, 10286921 - 10286957
Alignment:
Q  131 ctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    ||||||||||| |||||||| ||||||||||||||||    
T  10286921 ctcaaaaccgatccaaaccggaccgcgaacaccccta 10286957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 135 - 167
Target Start/End: Complemental strand, 12117574 - 12117542
Alignment:
Q  135 aaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||||||||||||||||||||| ||||||||||    
T  12117574 aaaccgaaccaaaccgcaccgcaaacaccccta 12117542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 113 - 165
Target Start/End: Original strand, 26525027 - 26525079
Alignment:
Q  113 gttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccc 165  Q
    ||||| ||||||||||  |||||||||||||||||| | | ||||||||||||    
T  26525027 gttcgaatgacttttagtctcaaaaccgaaccaaactggatcgcgaacacccc 26525079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 27456385 - 27456341
Alignment:
Q  84 aaccaaaccgcatacttatttatcttacggttcggatgactttta 128  Q
    ||||||||||||| ||| |||||| |||||||| |||||||||||    
T  27456385 aaccaaaccgcatgcttttttatcgtacggttcagatgactttta 27456341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 32237732 - 32237692
Alignment:
Q  32 atccaaaccgcattggttaagtttggtttgagttttatttt 72  Q
    |||||||||||||||||| ||||||||| || |||||||||    
T  32237732 atccaaaccgcattggtttagtttggttcgaattttatttt 32237692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 84 - 164
Target Start/End: Complemental strand, 32823630 - 32823550
Alignment:
Q  84 aaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccc 164  Q
    ||||||||||||| ||| |||||||  || || ||||||||||||  || |||| |||||||||| |||||| || |||||    
T  32823630 aaccaaaccgcatgcttttttatctcgcgatttggatgacttttatgctaaaaatcgaaccaaacagcaccgtgagcaccc 32823550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 113 - 153
Target Start/End: Complemental strand, 33434114 - 33434075
Alignment:
Q  113 gttcggatgacttttaacctcaaaaccgaaccaaaccgcac 153  Q
    |||| |||||||||||||||||||| |||||||||||||||    
T  33434114 gttcagatgacttttaacctcaaaa-cgaaccaaaccgcac 33434075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 166
Target Start/End: Complemental strand, 37375325 - 37375261
Alignment:
Q  102 tttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccct 166  Q
    |||||||| || || |||||| ||||| | |||||| |||||||| ||||||| |||||||||||    
T  37375325 tttatcttgcgatttggatgaattttaccatcaaaatcgaaccaacccgcaccacgaacacccct 37375261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 4e-36; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 25 - 167
Target Start/End: Complemental strand, 36567807 - 36567664
Alignment:
Q  25 cgatccaatccaaaccgcattggttaagtttggtttgagttttattttaaaat------aaaccgaaccaaaccgcatacttatttatcttacggttcgg 118  Q
    |||||||||||||||||||||||||     |||||||| |||||||||||||       |||||||||||||||||||||||||| ||||||||||||||    
T  36567807 cgatccaatccaaaccgcattggtt-----tggtttgaattttattttaaaagtcaaccaaaccgaaccaaaccgcatacttattcatcttacggttcgg 36567713  T
Q  119 atgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    || |||||||||||||||||| || ||||| ||||||||||||||||||    
T  36567712 ataacttttaacctcaaaaccaaatcaaacggcaccgcgaacaccccta 36567664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 79 - 167
Target Start/End: Original strand, 27572097 - 27572185
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||| ||||||||||||| ||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  27572097 aaccaaaccaaaccgcatgcttttttaccttgcggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcaaacaccccta 27572185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 87 - 167
Target Start/End: Complemental strand, 10090328 - 10090248
Alignment:
Q  87 caaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    ||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||  |||||||||||    
T  10090328 caaaccgcatacttatttatcttgcggttctgatgacttttagcctcaaaaccgaaccaaaccgcaccatgaacaccccta 10090248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 84 - 170
Target Start/End: Complemental strand, 25495110 - 25495024
Alignment:
Q  84 aaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaatt 170  Q
    |||||||| |||||||||||||| || |||||  ||||||||||| |||||||||||||||||||||||  ||||||||||||||||    
T  25495110 aaccaaactgcatacttatttatgttgcggtttagatgacttttagcctcaaaaccgaaccaaaccgcatagcgaacacccctaatt 25495024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 29 - 167
Target Start/End: Original strand, 12681070 - 12681204
Alignment:
Q  29 ccaatccaaaccgcattggttaagtttggtttgagttttattttaaaataaaccgaaccaaaccgcatacttatttatcttacggttcggatgactttta 128  Q
    |||||||||||||||||||||  |||||| |  | |||||    ||||| |||||||||||||| ||| ||| |||||||  ||||  | ||||||||||    
T  12681070 ccaatccaaaccgcattggtttggtttggatgaattttta----aaaatcaaccgaaccaaaccacatgcttttttatctcgcggtctgaatgactttta 12681165  T
Q  129 acctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
      ||||||||||||| |||||||||||||||||||||||    
T  12681166 tgctcaaaaccgaactaaaccgcaccgcgaacaccccta 12681204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 84 - 167
Target Start/End: Original strand, 12379070 - 12379154
Alignment:
Q  84 aaccaaaccgcatacttattt-atcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    ||||||||||||||||||||| ||||| ||||||| |||| |||||  ||||||| |||||||||| ||||||||||||||||||    
T  12379070 aaccaaaccgcatacttattttatcttgcggttcgaatgatttttagtctcaaaatcgaaccaaactgcaccgcgaacaccccta 12379154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 84 - 163
Target Start/End: Complemental strand, 40884356 - 40884277
Alignment:
Q  84 aaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacc 163  Q
    |||||||| |||||||| |||||||| ||||||| ||||||||||||||||||| ||||||| ||| |||| | ||||||    
T  40884356 aaccaaacagcatacttttttatcttgcggttcgaatgacttttaacctcaaaatcgaaccacaccacaccacaaacacc 40884277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 84 - 170
Target Start/End: Original strand, 28224921 - 28225007
Alignment:
Q  84 aaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaatt 170  Q
    |||||||| ||||| ||||||||||| || || | |||||||||  ||||||||| |||  ||||||||||||||||||||||||||    
T  28224921 aaccaaactgcatatttatttatcttgcgttttgcatgactttttgcctcaaaactgaattaaaccgcaccgcgaacacccctaatt 28225007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 87 - 153
Target Start/End: Original strand, 35240884 - 35240950
Alignment:
Q  87 caaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcac 153  Q
    |||||||||||||| || | |||||||||||||||| ||||| |||||||| |||||||||||||||    
T  35240884 caaaccgcatactttttcagcttacggttcggatgaattttagcctcaaaatcgaaccaaaccgcac 35240950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 102 - 167
Target Start/End: Original strand, 22747648 - 22747712
Alignment:
Q  102 tttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||||||| |||||||||||||||| | |||||||||||||| |||||| ||||||||||||||||    
T  22747648 tttatcttgcggttcggatgacttt-agcctcaaaaccgaactaaaccgtaccgcgaacaccccta 22747712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 79 - 167
Target Start/End: Complemental strand, 8409021 - 8408933
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||| ||||||||||||||||| ||| |||  ||||| |||||| | |||  ||  |||||||||||||||||||||||||||||||||    
T  8409021 aaccaaaccaaaccgcatacttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaaccgcaccgcgaacaccccta 8408933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 78 - 170
Target Start/End: Complemental strand, 9161010 - 9160920
Alignment:
Q  78 aaaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaatt 170  Q
    ||||| ||||||||||||| ||| |||||||  ||||| | |||||||||  | |||||||||||||||||||||||||||||||| ||||||    
T  9161010 aaaccaaaccaaaccgcatgctt-tttatctcgcggtttgaatgacttttttc-tcaaaaccgaaccaaaccgcaccgcgaacacctctaatt 9160920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 79 - 166
Target Start/End: Original strand, 30265843 - 30265930
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccct 166  Q
    |||| |||||||| ||||  || |||||||| |||||  ||||| |||||  ||||||||| ||||||||||||||||||||||||||    
T  30265843 aaccaaaccaaactgcatgtttttttatcttgcggtttagatgatttttatgctcaaaaccaaaccaaaccgcaccgcgaacacccct 30265930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 102 - 164
Target Start/End: Complemental strand, 23780832 - 23780770
Alignment:
Q  102 tttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccc 164  Q
    |||||||  ||||| ||||||||||||  || |||||||||||||||||||||||||||||||    
T  23780832 tttatctcgcggtttggatgacttttatgcttaaaaccgaaccaaaccgcaccgcgaacaccc 23780770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 102 - 164
Target Start/End: Complemental strand, 23867785 - 23867723
Alignment:
Q  102 tttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccc 164  Q
    |||||||  ||||| ||||||||||||  || |||||||||||||||||||||||||||||||    
T  23867785 tttatctcgcggtttggatgacttttatgcttaaaaccgaaccaaaccgcaccgcgaacaccc 23867723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 78 - 162
Target Start/End: Complemental strand, 2589006 - 2588922
Alignment:
Q  78 aaaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacac 162  Q
    ||||| |||||||||||||  || |||||||||||||||  ||||||||||  ||||||| |||||||||| || || |||||||    
T  2589006 aaaccaaaccaaaccgcatgtttttttatcttacggttcaaatgacttttagtctcaaaatcgaaccaaactgcgccacgaacac 2588922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 79 - 167
Target Start/End: Complemental strand, 11917436 - 11917348
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||| ||||||||||||| ||| ||| |||  ||||| |||||| | |||  ||  |||||||||||||||||||||||||||||||||    
T  11917436 aaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaaccgcaccgcgaacaccccta 11917348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 79 - 167
Target Start/End: Complemental strand, 15068491 - 15068403
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||| ||||||| ||||| ||| ||| |||  ||||| |||||| | |||  || ||||||||||||||||||||||||||||||||||    
T  15068491 aaccaaaccaaatcgcatgcttttttctctcgcggtttggatgattattatgcttaaaaccgaaccaaaccgcaccgcgaacaccccta 15068403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 102 - 166
Target Start/End: Complemental strand, 18432086 - 18432022
Alignment:
Q  102 tttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccct 166  Q
    |||||||||| |||||||||||||||||||| |||||||||  |||| ||||||  |||||||||    
T  18432086 tttatcttacagttcggatgacttttaacctaaaaaccgaagtaaactgcaccgaaaacacccct 18432022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 79 - 167
Target Start/End: Original strand, 27886468 - 27886556
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||| ||||||||||||| ||| ||| |||  ||||| |||||| | |||  ||  |||||||||||||||||||||||||||||||||    
T  27886468 aaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaaccgcaccgcgaacaccccta 27886556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 115 - 167
Target Start/End: Original strand, 40987816 - 40987868
Alignment:
Q  115 tcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||| ||| |||||||||||||||||| |||||||| ||||||||||||||||    
T  40987816 tcggttgatttttaacctcaaaaccgatccaaaccggaccgcgaacaccccta 40987868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 79 - 167
Target Start/End: Complemental strand, 42544689 - 42544601
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||| ||||||||||||| ||| |||||||  |||||  ||||||||||   |||||||||||| |||||| ||||||||||| |||||    
T  42544689 aaccaaaccaaaccgcatgcttttttatctcgcggtttagatgacttttttgctcaaaaccgaagcaaaccacaccgcgaacaacccta 42544601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 79 - 165
Target Start/End: Original strand, 17085289 - 17085375
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccc 165  Q
    |||| ||| ||| ||||| ||| |||||||   |||| ||||||||||||  |||||||| ||||||||||||||||| ||||||||    
T  17085289 aaccaaactaaatcgcatgcttttttatctcgtggtttggatgacttttatgctcaaaactgaaccaaaccgcaccgcaaacacccc 17085375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 95 - 153
Target Start/End: Complemental strand, 34087434 - 34087376
Alignment:
Q  95 atacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcac 153  Q
    ||||||||||||||| | |||| ||||| ||||||||||||||| ||| ||||||||||    
T  34087434 atacttatttatcttgcagttcagatgatttttaacctcaaaactgaatcaaaccgcac 34087376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 79 - 164
Target Start/End: Original strand, 36103663 - 36103749
Alignment:
Q  79 aaccgaaccaaaccgcatacttattt-atcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccc 164  Q
    |||| |||||||||||||| || ||| |||| ||  || |||||  |||||  ||||||||||||||||||||||||||||||||||    
T  36103663 aaccaaaccaaaccgcatattttttttatctcacactttggatgtattttatgctcaaaaccgaaccaaaccgcaccgcgaacaccc 36103749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 79 - 169
Target Start/End: Complemental strand, 41454889 - 41454799
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaat 169  Q
    |||| ||||||||||||||||||||||||||  | |||  |||||||||| | ||||||  | |  |||||||||||| ||||||||||||    
T  41454889 aaccaaaccaaaccgcatacttatttatcttgtgtttcaaatgacttttagcttcaaaattgtattaaaccgcaccgcaaacacccctaat 41454799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 124 - 161
Target Start/End: Original strand, 38176513 - 38176550
Alignment:
Q  124 ttttaacctcaaaaccgaaccaaaccgcaccgcgaaca 161  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  38176513 ttttaacctcaaaacagaaccaaaccgcaccgcgaaca 38176550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 124 - 161
Target Start/End: Original strand, 38203737 - 38203774
Alignment:
Q  124 ttttaacctcaaaaccgaaccaaaccgcaccgcgaaca 161  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  38203737 ttttaacctcaaaacagaaccaaaccgcaccgcgaaca 38203774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 115 - 168
Target Start/End: Original strand, 41061719 - 41061772
Alignment:
Q  115 tcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaa 168  Q
    |||| |||| ||| |||| |||||||| ||||||||||||||||||||||||||    
T  41061719 tcggttgacattttaccttaaaaccgatccaaaccgcaccgcgaacacccctaa 41061772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 111 - 163
Target Start/End: Original strand, 333361 - 333413
Alignment:
Q  111 cggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacc 163  Q
    ||||| ||||||||||||  ||||||| |||||||||||||||||| ||||||    
T  333361 cggtttggatgacttttatgctcaaaatcgaaccaaaccgcaccgcaaacacc 333413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 135 - 167
Target Start/End: Original strand, 667722 - 667754
Alignment:
Q  135 aaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||||||||||||||||||||||||||||||||    
T  667722 aaaccgaaccaaaccgcaccgcgaacaccccta 667754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 168
Target Start/End: Complemental strand, 6633410 - 6633275
Alignment:
Q  25 cgatccaatccaaaccgcattggttaagtttggtttgagttttattttaaaa-taaaccgaaccaaaccgcatacttatttatcttacggttcggatgac 123  Q
    ||||||||  |||||| ||||||||  ||||||||    ||||||||||||| | |||| ||||||||| ||| ||| |||||||||| |||||||        
T  6633410 cgatccaactcaaaccacattggtttggtttggttcagattttattttaaaagtcaaccaaaccaaaccacatgcttttttatcttacagttcggag--- 6633314  T
Q  124 ttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaa 168  Q
          |||||||| ||||| ||||||||||||||||||||||||    
T  6633313 ------cctcaaaatcgaactaaaccgcaccgcgaacacccctaa 6633275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 167
Target Start/End: Complemental strand, 38433728 - 38433640
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||| ||| |||||||||  || |||||||  ||||| | ||||||||||  ||||||||||||| |||| |||||| |||||||||||    
T  38433728 aaccaaactaaaccgcatgattttttatctcgcggtttgaatgacttttatgctcaaaaccgaactaaactgcaccgtgaacaccccta 38433640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 135 - 170
Target Start/End: Complemental strand, 701194 - 701159
Alignment:
Q  135 aaaccgaaccaaaccgcaccgcgaacacccctaatt 170  Q
    |||||||||||||||||||||| |||||||||||||    
T  701194 aaaccgaaccaaaccgcaccgcaaacacccctaatt 701159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 87 - 154
Target Start/End: Original strand, 32244436 - 32244503
Alignment:
Q  87 caaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcacc 154  Q
    |||||||||||||| || | |||||||||| |||||  ||||||||||||| ||||||  ||||||||    
T  32244436 caaaccgcatactttttcagcttacggttcagatgaaatttaacctcaaaatcgaaccgcaccgcacc 32244503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 79 - 145
Target Start/End: Complemental strand, 33792690 - 33792625
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaacca 145  Q
    |||||||||||||| |||| ||||||||||| ||||| | |||| ||||||||| |||||| |||||    
T  33792690 aaccgaaccaaaccacata-ttatttatcttgcggtttgaatgaattttaaccttaaaaccaaacca 33792625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 167
Target Start/End: Original strand, 6895386 - 6895451
Alignment:
Q  102 tttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||||||| |||||| | |||||||||||||||||| ||||  |||||||||| | || |||||||    
T  6895386 tttatcttgcggttcagttgacttttaacctcaaaatcgaaataaaccgcacctcaaataccccta 6895451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 115 - 167
Target Start/End: Complemental strand, 1495497 - 1495445
Alignment:
Q  115 tcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||| |||| ||| |||||||||| || |||||||| ||||||||||||||||    
T  1495497 tcggttgacattttacctcaaaactgatccaaaccggaccgcgaacaccccta 1495445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 114 - 146
Target Start/End: Complemental strand, 1681118 - 1681086
Alignment:
Q  114 ttcggatgacttttaacctcaaaaccgaaccaa 146  Q
    ||||||||| |||||||||||||||||||||||    
T  1681118 ttcggatgatttttaacctcaaaaccgaaccaa 1681086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 163
Target Start/End: Original strand, 2226936 - 2227020
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacc 163  Q
    |||| ||||||||| | | ||| |||||||  ||||| |||||  |||||  ||||||||||||||||||| | |||||||||||    
T  2226936 aaccaaaccaaaccacgttcttttttatctcgcggtttggatgttttttatgctcaaaaccgaaccaaaccactccgcgaacacc 2227020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 162
Target Start/End: Complemental strand, 6594980 - 6594920
Alignment:
Q  102 tttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacac 162  Q
    ||||||||| | ||| ||||||||||| | ||||||| ||||||||||||||  |||||||    
T  6594980 tttatcttatgattcagatgacttttaccttcaaaacggaaccaaaccgcactacgaacac 6594920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 115 - 167
Target Start/End: Original strand, 27111142 - 27111194
Alignment:
Q  115 tcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||| |||| ||| |||||||||| || |||||||||||||| ||||||||||    
T  27111142 tcggttgacattttacctcaaaactgatccaaaccgcaccgcaaacaccccta 27111194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 135 - 167
Target Start/End: Complemental strand, 30001986 - 30001954
Alignment:
Q  135 aaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    ||||||||||||||||||||||||||| |||||    
T  30001986 aaaccgaaccaaaccgcaccgcgaacaacccta 30001954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 168
Target Start/End: Original strand, 34881409 - 34881465
Alignment:
Q  112 ggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaa 168  Q
    |||| |||||||||||| ||||||||| |||  |||| ||||||||| |||||||||    
T  34881409 ggtttggatgacttttagcctcaaaactgaattaaactgcaccgcgagcacccctaa 34881465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 73; Significance: 4e-33; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 26 - 172
Target Start/End: Original strand, 55467635 - 55467787
Alignment:
Q  26 gatccaatccaaaccgcattggttaagtttggtttgagttttattttaaaa-taaaccg-----aaccaaaccgcatacttatttatcttacggttcgga 119  Q
    ||||||||||||||||||||||||   ||||||| |  ||||||||||||| | |||||     |||||||||||||||||||||||||| | |||||||    
T  55467635 gatccaatccaaaccgcattggtttgatttggttcggattttattttaaaagtcaaccgaaccaaaccaaaccgcatacttatttatcttgcagttcgga 55467734  T
Q  120 tgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaatttt 172  Q
    ||||||||| ||||||||||||||||||||||||||| ||||| |||| ||||    
T  55467735 tgacttttagcctcaaaaccgaaccaaaccgcaccgcaaacacacctagtttt 55467787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 25 - 167
Target Start/End: Complemental strand, 27054165 - 27054017
Alignment:
Q  25 cgatccaatccaaaccgcattggttaagtttggtttgagttttattttaaaat------aaaccgaaccaaaccgcatacttatttatcttacggttcgg 118  Q
    |||||||||||||| ||||||||||  ||||||||||| ||||||||||||||      ||||| |||||||  ||||||||||||||||| |  ||||     
T  27054165 cgatccaatccaaatcgcattggtttggtttggtttgaattttattttaaaattcaaccaaaccaaaccaaaatgcatacttatttatcttgcaattcga 27054066  T
Q  119 atgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    || |||||||||||||||||||||  |||| |||||||| |||||||||    
T  27054065 ataacttttaacctcaaaaccgaaataaactgcaccgcgcacaccccta 27054017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 79 - 163
Target Start/End: Complemental strand, 54122051 - 54121967
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacc 163  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||    
T  54122051 aaccaaaccaaaccgcatacttttttatcttacggttcggatgacttttaacctcaaaatcgaatcaaactgcaccgcaaacacc 54121967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 78 - 169
Target Start/End: Original strand, 2832450 - 2832541
Alignment:
Q  78 aaaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaat 169  Q
    ||||| ||||||||||||| ||| ||||||||  ||||||||||||||||| |||||||||| ||||||||| ||||||||||| |||||||    
T  2832450 aaaccaaaccaaaccgcatgcttttttatcttgtggttcggatgacttttagcctcaaaaccaaaccaaaccacaccgcgaacaaccctaat 2832541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 79 - 170
Target Start/End: Complemental strand, 26758254 - 26758163
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaatt 170  Q
    |||| |||||||||| ||||||||||||||| |||||||||||||||||||||| |||||||||||||| |  |||| |||||| |||||||    
T  26758254 aaccaaaccaaaccgtatacttatttatcttgcggttcggatgacttttaaccttaaaaccgaaccaaatcataccgtgaacacgcctaatt 26758163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 79 - 163
Target Start/End: Original strand, 17144782 - 17144865
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacc 163  Q
    |||| |||||| |||||||||| |||||||| ||||| |||||||||||| |||||||||||||||||||||||| |||||||||    
T  17144782 aaccaaaccaatccgcatactt-tttatcttgcggtttggatgacttttagcctcaaaaccgaaccaaaccgcactgcgaacacc 17144865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 79 - 170
Target Start/End: Original strand, 38652041 - 38652131
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaatt 170  Q
    |||| |||||||||||||| || |||||||| || ||||||||||||||| | |||||||| ||||||||||||||||||| ||||||||||    
T  38652041 aaccaaaccaaaccgcatattt-tttatcttgcgattcggatgacttttaccttcaaaaccaaaccaaaccgcaccgcgaatacccctaatt 38652131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 84 - 159
Target Start/End: Complemental strand, 45629218 - 45629143
Alignment:
Q  84 aaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaa 159  Q
    |||||||  ||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||  ||||||||    
T  45629218 aaccaaattgcatacttatttatcttgcggttcggatgacttttaaccttaaaaccgaatcaaaccaaaccgcgaa 45629143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 87 - 161
Target Start/End: Original strand, 22257559 - 22257633
Alignment:
Q  87 caaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaaca 161  Q
    ||||||||||||||||||||||  ||||||||||||||||||  ||||||||||||||| || |||||| |||||    
T  22257559 caaaccgcatacttatttatctcgcggttcggatgacttttagtctcaaaaccgaaccacacagcaccgtgaaca 22257633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 84 - 165
Target Start/End: Original strand, 21586900 - 21586981
Alignment:
Q  84 aaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccc 165  Q
    |||||||| |||| ||| |||||||  ||||| ||||||||||||| |||||||||||||||||| |||||| |||||||||    
T  21586900 aaccaaactgcatgcttttttatctcgcggtttggatgacttttaagctcaaaaccgaaccaaactgcaccgtgaacacccc 21586981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 79 - 164
Target Start/End: Original strand, 42363277 - 42363362
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccc 164  Q
    |||| |||||||||||||  || |||||||| ||||||  || ||||||| |||||||||||||||||||||||| ||||||||||    
T  42363277 aaccaaaccaaaccgcatgattttttatcttgcggttcaaattacttttaccctcaaaaccgaaccaaaccgcactgcgaacaccc 42363362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 79 - 168
Target Start/End: Complemental strand, 43030447 - 43030358
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaa 168  Q
    |||| |||||||| |||||||| |||||||| || |||| ||||||||||  ||||||||  || |||||||||||||||||||||||||    
T  43030447 aaccaaaccaaactgcatacttttttatcttgcgattcgcatgacttttatgctcaaaactaaatcaaaccgcaccgcgaacacccctaa 43030358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 79 - 167
Target Start/End: Original strand, 6004439 - 6004527
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||| ||||||||||||| ||| |||||||  ||||| ||||||||||||  || ||||||||||||||||||| ||| ||||||||||    
T  6004439 aaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctgaaaaccgaaccaaaccgcatcgcaaacaccccta 6004527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 25 - 170
Target Start/End: Original strand, 2566322 - 2566473
Alignment:
Q  25 cgatccaatccaaaccgcattggttaagtttggtttgagttttattttaaaa--taa----accgaaccaaaccgcatacttatttatcttacggttcgg 118  Q
    |||||||||||||||| ||||| ||  ||||||||  | |||||||||||||  |||    ||||||||||||| |||| || ||||||||  ||||| |    
T  2566322 cgatccaatccaaaccacattgattttgtttggttcaaattttattttaaaacttaatcgaaccgaaccaaaccacatatttctttatcttgtggttcag 2566421  T
Q  119 atgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaatt 170  Q
    |||||||||| | |||||| ||||||||| |||||| | |||||||| ||||    
T  2566422 atgacttttagcatcaaaatcgaaccaaagcgcaccacaaacaccccaaatt 2566473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 79 - 169
Target Start/End: Complemental strand, 20038415 - 20038325
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaat 169  Q
    |||| ||||||||| ||| |||  |||||||||||||| ||||||||||||||| ||||| ||||||||| ||| ||  ||||||||||||    
T  20038415 aaccaaaccaaaccacatgcttccttatcttacggttcagatgacttttaaccttaaaactgaaccaaactgcatcgtaaacacccctaat 20038325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 78 - 151
Target Start/End: Original strand, 8558009 - 8558082
Alignment:
Q  78 aaaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgc 151  Q
    ||||||||||||||||||  ||| |||||||| | |||||| ||||||||| |||||||||| |||||||||||    
T  8558009 aaaccgaaccaaaccgcaagcttttttatcttgcagttcgggtgacttttaccctcaaaaccaaaccaaaccgc 8558082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 87 - 168
Target Start/End: Original strand, 26292016 - 26292097
Alignment:
Q  87 caaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaa 168  Q
    ||||||||| | || |||||||| ||||| |||||| ||||||  | |||| ||||||||||||||||||||||||||||||    
T  26292016 caaaccgcacaattttttatcttgcggtttggatgatttttaattttaaaatcgaaccaaaccgcaccgcgaacacccctaa 26292097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 87 - 167
Target Start/End: Complemental strand, 37044943 - 37044863
Alignment:
Q  87 caaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    ||||||||||  || |||||||| ||||| |||||||||||   |||||||||||||||||||||||||  ||||||||||    
T  37044943 caaaccgcatgtttttttatcttgcggtttggatgactttttctctcaaaaccgaaccaaaccgcaccgtaaacaccccta 37044863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 20846477 - 20846418
Alignment:
Q  102 tttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaaca 161  Q
    |||||||| ||||||||||||||||||  ||| |||||||||||||| ||||||||||||    
T  20846477 tttatcttgcggttcggatgacttttactctcgaaaccgaaccaaactgcaccgcgaaca 20846418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 78 - 161
Target Start/End: Complemental strand, 44650995 - 44650912
Alignment:
Q  78 aaaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaaca 161  Q
    ||||| |||||||||||||  || |||||  ||||| |||||||||||||| ||||||||| ||| |||||| |||||||||||    
T  44650995 aaaccaaaccaaaccgcatgtttttttattctacggctcggatgacttttaccctcaaaactgaatcaaaccacaccgcgaaca 44650912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 29 - 168
Target Start/End: Complemental strand, 51191791 - 51191645
Alignment:
Q  29 ccaatccaaaccgcattggttaagtttggtttgagttttattttaaaat------aaaccgaaccaaaccgcatacttatttatcttacggttcggatga 122  Q
    |||||||||||||||| ||||  |||||||| |  ||| ||||||||||       |||| |||||||||||||| || |||||||| ||||||  || |    
T  51191791 ccaatccaaaccgcatcggtttggtttggttcggttttcattttaaaatccaaccgaaccaaaccaaaccgcatatttttttatcttgcggttctaataa 51191692  T
Q  123 cttttaacctcaaaaccgaaccaaaccgca-ccgcgaacacccctaa 168  Q
    |||||||||||||||  ||||||||||||| |  |||||||||||||    
T  51191691 cttttaacctcaaaatagaaccaaaccgcatcaacgaacacccctaa 51191645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 102 - 166
Target Start/End: Original strand, 10481720 - 10481784
Alignment:
Q  102 tttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccct 166  Q
    ||||||||  |||||  |||||||||| ||||||||||||||||||| |||||| ||||||||||    
T  10481720 tttatcttgtggttccaatgacttttatcctcaaaaccgaaccaaactgcaccgtgaacacccct 10481784  T

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Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 115 - 167
Target Start/End: Complemental strand, 37282277 - 37282225
Alignment:
Q  115 tcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||| ||| |||||||||||||||||| |||||||| ||||||||||||||||    
T  37282277 tcggttgatttttaacctcaaaaccgatccaaaccggaccgcgaacaccccta 37282225  T

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Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 53 - 170
Target Start/End: Complemental strand, 40483985 - 40483862
Alignment:
Q  53 tttggtttgagttttattttaaaa------taaaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaa 146  Q
    |||||||||| |||||||||||||      | |||| ||||||||||||| | | ||||||||  |||||| |||| ||||||| | |||| |||| |||    
T  40483985 tttggtttgatttttattttaaaagtcaactgaaccaaaccaaaccgcatgcatttttatcttgtggttcgaatgatttttaactttaaaatcgaatcaa 40483886  T
Q  147 accgcaccgcgaacacccctaatt 170  Q
    |||||||  |||||||||||||||    
T  40483885 accgcacaacgaacacccctaatt 40483862  T

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Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 79 - 167
Target Start/End: Original strand, 51149709 - 51149797
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||| ||||||||||||| ||| ||| |||  ||||| |||||| | |||  ||  |||||||||||||||||||||||||||||||||    
T  51149709 aaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaaccgcaccgcgaacaccccta 51149797  T

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Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 112 - 167
Target Start/End: Original strand, 9827863 - 9827918
Alignment:
Q  112 ggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||| ||||||||||||  || ||||||||||||| ||||||||||||||||||||    
T  9827863 ggtttggatgacttttatgcttaaaaccgaaccaagccgcaccgcgaacaccccta 9827918  T

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Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 87 - 168
Target Start/End: Complemental strand, 32880323 - 32880242
Alignment:
Q  87 caaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaa 168  Q
    |||||| ||| ||| |||||||  ||||| ||| ||||||||  |||||| ||||||||||||||||||| ||||| |||||    
T  32880323 caaaccacatgcttttttatctcgcggtttggaggacttttatgctcaaagccgaaccaaaccgcaccgcaaacactcctaa 32880242  T

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Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 135 - 168
Target Start/End: Original strand, 35402313 - 35402346
Alignment:
Q  135 aaaccgaaccaaaccgcaccgcgaacacccctaa 168  Q
    ||||||||||||||||||||||||||||||||||    
T  35402313 aaaccgaaccaaaccgcaccgcgaacacccctaa 35402346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 79 - 140
Target Start/End: Original strand, 45915255 - 45915316
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccg 140  Q
    |||| |||||||||||||||||||| ||||| ||||| | ||||| ||||||||| ||||||    
T  45915255 aaccaaaccaaaccgcatacttattcatcttgcggtttgaatgacctttaacctccaaaccg 45915316  T

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Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 135 - 167
Target Start/End: Complemental strand, 10369186 - 10369154
Alignment:
Q  135 aaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||||||||||||||||||||||||||||||||    
T  10369186 aaaccgaaccaaaccgcaccgcgaacaccccta 10369154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 135 - 167
Target Start/End: Complemental strand, 34794569 - 34794537
Alignment:
Q  135 aaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||||||||||||||||||||||||||||||||    
T  34794569 aaaccgaaccaaaccgcaccgcgaacaccccta 34794537  T

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Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 84 - 167
Target Start/End: Original strand, 35532193 - 35532276
Alignment:
Q  84 aaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    ||||||||||||| ||| |||||||  |  || ||||||||||||  |||||||||||||||||| |||| || || |||||||    
T  35532193 aaccaaaccgcatgcttttttatctcgcaatttggatgacttttatgctcaaaaccgaaccaaactgcactgctaataccccta 35532276  T

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Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 150
Target Start/End: Complemental strand, 45699614 - 45699570
Alignment:
Q  105 atcttacggttcggatgacttttaacctcaaaaccgaaccaaaccg 150  Q
    |||||||||||||||||| ||||| | |||||||||||||||||||    
T  45699614 atcttacggttcggatga-ttttagcttcaaaaccgaaccaaaccg 45699570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 167
Target Start/End: Original strand, 50562661 - 50562710
Alignment:
Q  118 gatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||||||||||  || |||| |||||||||||||||||||| ||||||||    
T  50562661 gatgacttttatgcttaaaatcgaaccaaaccgcaccgcgatcaccccta 50562710  T

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Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 167
Target Start/End: Original strand, 4669699 - 4669787
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||| ||||||||||||| ||| ||| |||  ||||| |||||| | |||  ||  |||||||||||||||||||||| ||||| ||||    
T  4669699 aaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaaccgcaccgcaaacactccta 4669787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 131 - 167
Target Start/End: Complemental strand, 32055470 - 32055434
Alignment:
Q  131 ctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    ||||||||||| |||||||| ||||||||||||||||    
T  32055470 ctcaaaaccgatccaaaccggaccgcgaacaccccta 32055434  T

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Target: chr4 (Bit Score: 70; Significance: 2e-31; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 26 - 171
Target Start/End: Original strand, 36106412 - 36106564
Alignment:
Q  26 gatccaatccaaaccgcattggttaagtttggtttgagttttattttaaaa-taaaccgaaccaaacc------gcatacttatttatcttacggttcgg 118  Q
    |||||||  |||||||||||||||  |||||||| |  ||||||||||||| | ||||||||||||||      ||||  || |||||||| ||||||||    
T  36106412 gatccaactcaaaccgcattggtttggtttggttcggattttattttaaaagtcaaccgaaccaaaccaaaaccgcatgtttttttatcttgcggttcgg 36106511  T
Q  119 atgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaattt 171  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  36106512 atgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacatccctaattt 36106564  T

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Target: chr4; HSP #2
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 79 - 166
Target Start/End: Original strand, 48293457 - 48293544
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccct 166  Q
    |||| ||||||||||||| ||| |||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  48293457 aaccaaaccaaaccgcatgcttttttaccttgcggttcggatgacttttaacctcaaaaccgaaccaaactgcaccgcgaacacccct 48293544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 23450036 - 23450119
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacac 162  Q
    |||| |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| |||| ||||||| |||||    
T  23450036 aaccaaaccaaaccgcatacttatttatcttgcagttcggatgacttttaacctcaaaaccgaactaaactgcaccgcaaacac 23450119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 25 - 166
Target Start/End: Complemental strand, 48338431 - 48338285
Alignment:
Q  25 cgatccaatccaaaccgcattggttaagtttggtttgagttttattttaaaa-taaaccgaaccaaacc-----gcatacttatttatcttacggttcgg 118  Q
    ||||||||| |||||||||||| ||  ||||||||||  ||||||||||||| | ||||||||||||||     ||||  || |||||||||||||||||    
T  48338431 cgatccaattcaaaccgcattgatttggtttggtttggattttattttaaaagtcaaccgaaccaaaccaaactgcatgttt-tttatcttacggttcgg 48338333  T
Q  119 atgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccct 166  Q
    |||||||||||||| ||||||||||||||| ||||||| || ||||||    
T  48338332 atgacttttaaccttaaaaccgaaccaaactgcaccgcaaatacccct 48338285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 86 - 167
Target Start/End: Original strand, 32223378 - 32223459
Alignment:
Q  86 ccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    ||||||||||| ||| |||||||| || || |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  32223378 ccaaaccgcatgcttttttatctttcgatttggatgacttttaacctcaaaaccgaatcaaaccgcaccgcgaacaccccta 32223459  T

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Target: chr4; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 79 - 167
Target Start/End: Original strand, 23120309 - 23120397
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||| ||||||||||||| ||| |||||||| |||||||||||||||||| | |||||| |||| ||||||||||||||||||||||||    
T  23120309 aaccaaaccaaaccgcatgcttttttatcttgcggttcggatgacttttaccttcaaaatcgaatcaaaccgcaccgcgaacaccccta 23120397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 78 - 169
Target Start/End: Complemental strand, 43630609 - 43630518
Alignment:
Q  78 aaaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaat 169  Q
    ||||| |||||||||||||| || ||||||| |||||| ||||||||||||  ||||||| |||||||||||||||||||||||| ||||||    
T  43630609 aaaccaaaccaaaccgcatatttttttatctcacggtttggatgacttttatactcaaaatcgaaccaaaccgcaccgcgaacactcctaat 43630518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 94 - 168
Target Start/End: Complemental strand, 4642437 - 4642363
Alignment:
Q  94 catacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaa 168  Q
    |||||||||||||||| |||||||||| ||||||| ||||||||||||||||||||| ||||| |||||||||||    
T  4642437 catacttatttatcttgcggttcggataacttttagcctcaaaaccgaaccaaaccgtaccgccaacacccctaa 4642363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 29 - 167
Target Start/End: Complemental strand, 6333403 - 6333259
Alignment:
Q  29 ccaatccaaaccgcattggttaagtttggtttgagttttat------tttaaaataaaccgaaccaaaccgcatacttatttatcttacggttcggatga 122  Q
    |||||||||||||||||||||  ||||||||||| ||  ||      || ||||| |||| ||||||||||||| ||| |||||||  ||||| ||||||    
T  6333403 ccaatccaaaccgcattggtttggtttggtttgatttggatgactttttaaaaatcaaccaaaccaaaccgcatgcttttttatctcgcggtttggatga 6333304  T
Q  123 cttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||||   ||||||| |||||||||||||||||||||||||||||    
T  6333303 cttttttgctcaaaatcgaaccaaaccgcaccgcgaacaccccta 6333259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 79 - 167
Target Start/End: Complemental strand, 20986452 - 20986364
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||| ||||||||||||||||| |||||||| ||||| |||||||||||| | ||||||||||| ||||||||| ||| ||||||||||    
T  20986452 aaccaaaccaaaccgcatacttgtttatcttgcggtttggatgacttttagcttcaaaaccgaaacaaaccgcatcgcaaacaccccta 20986364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 79 - 167
Target Start/End: Original strand, 40900135 - 40900223
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||| ||||||||||||| ||| |||||||  | ||| ||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  40900135 aaccaaaccaaaccgcatgcttttttatctcgcagtttggatgacttttatgctcaaaaccgaaccaaaccgcaccgcgaacaccccta 40900223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 21 - 169
Target Start/End: Original strand, 5122372 - 5122526
Alignment:
Q  21 aaatcgatccaatccaaaccgcattggttaagtttggtttgagttttattttaaaa-taaaccgaaccaaa-----ccgcatacttatttatcttacggt 114  Q
    |||||||||||| ||| ||| ||||||||  |||||||| |  ||||||||| ||| | ||||||||||||     |||||| ||| ||||||||  |||    
T  5122372 aaatcgatccaacccagaccacattggtttggtttggttcggattttatttttaaagtcaaccgaaccaaatcaaaccgcatgcttttttatcttgtggt 5122471  T
Q  115 tcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaat 169  Q
    |   |||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  5122472 ttatatgacttttaccctcaaaaccgaaccaaaccgcaccgcaaacacccctaat 5122526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 84 - 170
Target Start/End: Original strand, 5262021 - 5262107
Alignment:
Q  84 aaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaatt 170  Q
    ||||||||||||| ||| |||||||| ||||| ||||||||||||  |||||||||||| ||||||||| ||||||||||| |||||    
T  5262021 aaccaaaccgcatgcttttttatcttgcggtttggatgacttttatgctcaaaaccgaatcaaaccgcatcgcgaacacccgtaatt 5262107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 84 - 162
Target Start/End: Complemental strand, 28147805 - 28147727
Alignment:
Q  84 aaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacac 162  Q
    ||||||||||| ||||||||||||||||||||| |||||  ||||||||||||||| || ||||| |||||||||||||    
T  28147805 aaccaaaccgcctacttatttatcttacggttcagatgatgtttaacctcaaaaccaaatcaaacggcaccgcgaacac 28147727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 73 - 165
Target Start/End: Complemental strand, 51394755 - 51394663
Alignment:
Q  73 aaaataaaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccc 165  Q
    ||||| ||||||| |||||||||| ||| |||||||  ||||| ||||||||||||  |||||||| ||||||||| ||||||||||||||||    
T  51394755 aaaatcaaccgaatcaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaactgaaccaaactgcaccgcgaacacccc 51394663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 73 - 169
Target Start/End: Complemental strand, 52344774 - 52344678
Alignment:
Q  73 aaaataaaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaat 169  Q
    ||||| || ||||||||||||||| ||| ||||||| |||||| ||||||||||||  ||||||| | | |||||||||||||||||||||| ||||    
T  52344774 aaaattaatcgaaccaaaccgcatgcttttttatctcacggtttggatgacttttatgctcaaaatcaacccaaaccgcaccgcgaacacccgtaat 52344678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 78 - 161
Target Start/End: Complemental strand, 21069077 - 21068994
Alignment:
Q  78 aaaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaaca 161  Q
    |||||||||||||| ||||| |||||||| || | ||||| ||||||||||||||||||| ||||| |||||||||||| ||||    
T  21069077 aaaccgaaccaaactgcatatttatttattttgcagttcgaatgacttttaacctcaaaatcgaactaaaccgcaccgcaaaca 21068994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 84 - 169
Target Start/End: Complemental strand, 10218704 - 10218619
Alignment:
Q  84 aaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaat 169  Q
    ||||||||||||| ||| ||||||||  ||||  |||||||||||  ||||||||||||||||| |||||||| ||||||||||||    
T  10218704 aaccaaaccgcatgcttttttatcttgaggtttagatgacttttatgctcaaaaccgaaccaaaacgcaccgcaaacacccctaat 10218619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 79 - 167
Target Start/End: Original strand, 40806870 - 40806958
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||| ||||||| ||||| ||| |||||||  ||||| ||||||||||||  ||||||||||||||||||| |||||| ||||||||||    
T  40806870 aaccaaaccaaatcgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaaccaaaccacaccgcaaacaccccta 40806958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 25 - 164
Target Start/End: Complemental strand, 8484761 - 8484611
Alignment:
Q  25 cgatccaatccaaaccgcattggttaagtttggtttga-----gttttattttaaaa-taaaccgaaccaa-----accgcatacttatttatcttacgg 113  Q
    |||||||||||||||||||||||||  |||| |||||      |||||||||||||| | ||||||| |||     |||||||| ||||||||||| |||    
T  8484761 cgatccaatccaaaccgcattggtttggtttagtttggttcatgttttattttaaaagtcaaccgaatcaacacaaaccgcatagttatttatcttgcgg 8484662  T
Q  114 ttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccc 164  Q
    || | | ||||||||||||||||| | |||| ||||| |||||||||||||    
T  8484661 ttggaaagacttttaacctcaaaatcaaaccgaaccgtaccgcgaacaccc 8484611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 102 - 169
Target Start/End: Original strand, 18319626 - 18319693
Alignment:
Q  102 tttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaat 169  Q
    |||||||||||||||  ||||||||||  |||||||| |||||||||||||| | |||||||||||||    
T  18319626 tttatcttacggttcaaatgacttttatactcaaaactgaaccaaaccgcacagtgaacacccctaat 18319693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 102 - 169
Target Start/End: Complemental strand, 18399055 - 18398988
Alignment:
Q  102 tttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaat 169  Q
    |||||||||||||||  ||||||||||  |||||||| |||||||||||||| | |||||||||||||    
T  18399055 tttatcttacggttcaaatgacttttatactcaaaactgaaccaaaccgcacagtgaacacccctaat 18398988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 115 - 170
Target Start/End: Original strand, 34277436 - 34277491
Alignment:
Q  115 tcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaatt 170  Q
    |||| |||| ||| ||||||||||||| ||||||||||||||||||||||||||||    
T  34277436 tcggttgacattttacctcaaaaccgatccaaaccgcaccgcgaacacccctaatt 34277491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 88 - 130
Target Start/End: Original strand, 1566156 - 1566198
Alignment:
Q  88 aaaccgcatacttatttatcttacggttcggatgacttttaac 130  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  1566156 aaaccgcatacttatttatcttacggttcagatgacttttaac 1566198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 102 - 168
Target Start/End: Original strand, 10778548 - 10778614
Alignment:
Q  102 tttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaa 168  Q
    |||||||| |||||| ||| |||||||| ||||||| |||| |||||||||||| ||||||||||||    
T  10778548 tttatcttgcggttcagataacttttaatctcaaaatcgaatcaaaccgcaccgtgaacacccctaa 10778614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 79 - 169
Target Start/End: Complemental strand, 31301326 - 31301236
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaat 169  Q
    |||| |||||||||||||  || |||||||  ||||| ||||||||||||  ||||||||  |||||||| ||||||| ||||||||||||    
T  31301326 aaccaaaccaaaccgcatgtttttttatctcgcggtttggatgacttttatgctcaaaactaaaccaaactgcaccgcaaacacccctaat 31301236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 98 - 171
Target Start/End: Complemental strand, 41260284 - 41260211
Alignment:
Q  98 cttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaattt 171  Q
    |||||||||||  ||||| |||||| |||||  |||||||||||||||||||||||| | |||||| |||||||    
T  41260284 cttatttatctcgcggttaggatgatttttatgctcaaaaccgaaccaaaccgcaccacaaacacctctaattt 41260211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 167
Target Start/End: Original strand, 54274016 - 54274150
Alignment:
Q  29 ccaatccaaaccgcattggttaagtttggtttgagttttattttaaaata---aaccgaaccaaaccgcatacttatttatcttacggttcggatgactt 125  Q
    |||||||||||| ||||||||  |||||||| |  ||| |||||||||     |||| |||||||||||||  || | |||||| |||||||||||| ||    
T  54274016 ccaatccaaaccacattggtttggtttggttcggttttcattttaaaagcccgaaccaaaccaaaccgcatgattttctatcttgcggttcggatgagtt 54274115  T
Q  126 ttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    ||||||||       |||||||||||||||||||||||||||    
T  54274116 ttaacctc-------aaccaaaccgcaccgcgaacaccccta 54274150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 115 - 167
Target Start/End: Complemental strand, 24574787 - 24574735
Alignment:
Q  115 tcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||| ||| |||||||||||||||||| |||||||| ||||||||||||||||    
T  24574787 tcggttgatttttaacctcaaaaccgatccaaaccggaccgcgaacaccccta 24574735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 79 - 167
Target Start/End: Complemental strand, 29636804 - 29636716
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||| ||||||||||||| ||| ||| |||  ||||| |||||| | |||  ||  |||||||||||||||||||||||||||||||||    
T  29636804 aaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaaccgcaccgcgaacaccccta 29636716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 79 - 167
Target Start/End: Complemental strand, 36077603 - 36077515
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||| ||||||||||||||||| ||| |||  ||||| | |||| | |||  ||  |||||||||||||||||||||||||||||||||    
T  36077603 aaccaaaccaaaccgcatacttttttctctcgcggtttgaatgattattatgcttgaaaccgaaccaaaccgcaccgcgaacaccccta 36077515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 102 - 162
Target Start/End: Complemental strand, 42198797 - 42198737
Alignment:
Q  102 tttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacac 162  Q
    |||||||| |||||  |||||| ||||||||||||| |||||||||| |||||||||||||    
T  42198797 tttatcttgcggttatgatgacatttaacctcaaaatcgaaccaaactgcaccgcgaacac 42198737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 79 - 167
Target Start/End: Original strand, 50571010 - 50571098
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||| ||||||||||||| ||| ||| |||  ||||| |||||| | |||  ||  |||||||||||||||||||||||||||||||||    
T  50571010 aaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaaccgcaccgcgaacaccccta 50571098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 124 - 167
Target Start/End: Original strand, 9280410 - 9280453
Alignment:
Q  124 ttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||||||||||||||||| |||||||| ||||||||||||||||    
T  9280410 ttttaacctcaaaaccgatccaaaccggaccgcgaacaccccta 9280453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 79 - 169
Target Start/End: Original strand, 30194027 - 30194118
Alignment:
Q  79 aaccgaaccaaaccgcatacttattt-atcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaat 169  Q
    |||| ||||||||||||| ||| ||| |||| |||||| | |||||||||   || ||| ||||| ||||||||||||||||||||||||||    
T  30194027 aaccaaaccaaaccgcatgctttttttatctcacggtttgaatgacttttttacttaaacccgaatcaaaccgcaccgcgaacacccctaat 30194118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 84 - 167
Target Start/End: Complemental strand, 45983409 - 45983326
Alignment:
Q  84 aaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||||||||||||  || |||||||| |||||| ||| ||||||| | ||||| ||||||||||| ||||| | ||||||||||    
T  45983409 aaccaaaccgcatgattttttatcttgcggttcagataacttttatcttcaaagccgaaccaaactgcaccacaaacaccccta 45983326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 135 - 169
Target Start/End: Original strand, 29644233 - 29644267
Alignment:
Q  135 aaaccgaaccaaaccgcaccgcgaacacccctaat 169  Q
    |||||||||||||||||||||||||||||||||||    
T  29644233 aaaccgaaccaaaccgcaccgcgaacacccctaat 29644267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 149
Target Start/End: Complemental strand, 41325118 - 41325056
Alignment:
Q  87 caaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaacc 149  Q
    ||||||||||||||||||||||  ||||||  |||||||| || || ||||||||||||||||    
T  41325118 caaaccgcatacttatttatctcgcggttcaaatgactttcaatcttaaaaccgaaccaaacc 41325056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 135 - 169
Target Start/End: Complemental strand, 42557699 - 42557665
Alignment:
Q  135 aaaccgaaccaaaccgcaccgcgaacacccctaat 169  Q
    |||||||||||||||||||||||||||||||||||    
T  42557699 aaaccgaaccaaaccgcaccgcgaacacccctaat 42557665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 64 - 156
Target Start/End: Original strand, 11031671 - 11031764
Alignment:
Q  64 ttttattttaaaa-taaaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgc 156  Q
    ||||||||||||| | |||| ||||||||| ||| ||| |||||| | || || || ||||||||| |||||||||| | ||||||||||||||    
T  11031671 ttttattttaaaagtcaaccaaaccaaaccacatgcttttttatcatgcgatttggctgacttttagcctcaaaaccaacccaaaccgcaccgc 11031764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 115 - 164
Target Start/End: Complemental strand, 42414178 - 42414129
Alignment:
Q  115 tcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccc 164  Q
    |||| |||| ||| ||||||||||||| ||||||||||||||||||||||    
T  42414178 tcggttgacattttacctcaaaaccgatccaaaccgcaccgcgaacaccc 42414129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 130 - 167
Target Start/End: Original strand, 42430494 - 42430531
Alignment:
Q  130 cctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||||||||||| |||||||||||||||||||||||||    
T  42430494 cctcaaaaccgatccaaaccgcaccgcgaacaccccta 42430531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 102 - 167
Target Start/End: Complemental strand, 48255725 - 48255660
Alignment:
Q  102 tttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    ||||||||  ||||| ||| ||||||| ||| ||||| |||||||||||||||| |||||||||||    
T  48255725 tttatcttgtggttcagataacttttagccttaaaactgaaccaaaccgcaccgtgaacaccccta 48255660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 73 - 161
Target Start/End: Original strand, 8176638 - 8176726
Alignment:
Q  73 aaaataaaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaaca 161  Q
    ||||| |||| ||||||||||||| | | |||||||||| ||| | |||||||||| ||||||||  |||| |||||  ||||||||||    
T  8176638 aaaatcaaccaaaccaaaccgcatgcgtttttatcttacagtttgaatgacttttatcctcaaaattgaactaaaccataccgcgaaca 8176726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 167
Target Start/End: Complemental strand, 32136723 - 32136635
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||| ||||||| ||||| ||| |||||||   |||| || |||||||||   |||||||||||||||||||||| || ||||||||||    
T  32136723 aaccaaaccaaatcgcatgcttttttatctcgaggtttgggtgacttttatgttcaaaaccgaaccaaaccgcactgcaaacaccccta 32136635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 169
Target Start/End: Complemental strand, 40494431 - 40494364
Alignment:
Q  102 tttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaat 169  Q
    |||||||||| ||||  || |||||||||||||||||||||| || | |||||||||| ||| |||||    
T  40494431 tttatcttacagttcatataacttttaacctcaaaaccgaacaaacctgcaccgcgaatacctctaat 40494364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 87 - 162
Target Start/End: Complemental strand, 45464212 - 45464137
Alignment:
Q  87 caaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacac 162  Q
    |||||||| |||||| ||||||||| |||| ||| | |||||  ||||||||||||||||||  |||||| |||||    
T  45464212 caaaccgcgtacttacttatcttacagttcagataatttttagtctcaaaaccgaaccaaactacaccgcaaacac 45464137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 111 - 153
Target Start/End: Complemental strand, 5061335 - 5061293
Alignment:
Q  111 cggttcggatgacttttaacctcaaaaccgaaccaaaccgcac 153  Q
    ||||||||| ||||||||| ||||||| |||||||||||||||    
T  5061335 cggttcggaagacttttaatctcaaaatcgaaccaaaccgcac 5061293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 170
Target Start/End: Original strand, 7785081 - 7785139
Alignment:
Q  112 ggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaatt 170  Q
    ||||| |||||||||||||||||||||| ||||||||  |||| | | |||||||||||    
T  7785081 ggttcagatgacttttaacctcaaaaccaaaccaaactacaccaccatcacccctaatt 7785139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 79 - 153
Target Start/End: Original strand, 23625953 - 23626027
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcac 153  Q
    |||| ||| ||||||||||||| ||||| ||  | || |||||||||||||||| |||||||| |||||| ||||    
T  23625953 aaccaaacaaaaccgcatacttttttattttgtgatttggatgacttttaaccttaaaaccgagccaaactgcac 23626027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 88 - 170
Target Start/End: Complemental strand, 27743241 - 27743159
Alignment:
Q  88 aaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaatt 170  Q
    ||||||||||| ||||||||   || |||  ||||||||||||||||||| ||||||||||  |||  | |||||||||||||    
T  27743241 aaaccgcatacatatttatcaagcgattcaaatgacttttaacctcaaaatcgaaccaaactacactccaaacacccctaatt 27743159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 121 - 163
Target Start/End: Original strand, 29335208 - 29335250
Alignment:
Q  121 gacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacc 163  Q
    ||||||||||||||||| |||||||||| ||||||| ||||||    
T  29335208 gacttttaacctcaaaatcgaaccaaactgcaccgcaaacacc 29335250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 156
Target Start/End: Complemental strand, 2939958 - 2939881
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgc 156  Q
    |||| ||| ||| ||||||||| |||||||| ||||||| | |||||||||||| ||||  ||| |||||| ||||||    
T  2939958 aaccaaactaaatcgcatacttttttatcttgcggttcgaacgacttttaaccttaaaattgaatcaaaccacaccgc 2939881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 154
Target Start/End: Complemental strand, 17844899 - 17844847
Alignment:
Q  102 tttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcacc 154  Q
    ||||| ||||| ||| ||||||||||| | ||||||| |||||||||||||||    
T  17844899 tttattttacgattcagatgacttttagcttcaaaactgaaccaaaccgcacc 17844847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 52 - 154
Target Start/End: Original strand, 19753540 - 19753648
Alignment:
Q  52 gtttggtttgagttttattttaaaa-taaaccgaac-----caaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaacca 145  Q
    |||||||| || ||||||||||||| | ||||||||     |||||||||||||| || | |||||||||| |||||  |||| |||||||| ||||||     
T  19753540 gtttggttcgaattttattttaaaagtcaaccgaaccaaatcaaaccgcatactttttcagcttacggttcagatgaaatttagcctcaaaatcgaaccg 19753639  T
Q  146 aaccgcacc 154  Q
     ||||||||    
T  19753640 caccgcacc 19753648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 52 - 154
Target Start/End: Complemental strand, 19786266 - 19786158
Alignment:
Q  52 gtttggtttgagttttattttaaaa-taaaccgaac-----caaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaacca 145  Q
    |||||||| || ||||||||||||| | ||||||||     |||||||||||||| || | |||||||||| |||||  |||| |||||||| ||||||     
T  19786266 gtttggttcgaattttattttaaaagtcaaccgaaccaaatcaaaccgcatactttttcagcttacggttcagatgaaatttagcctcaaaatcgaaccg 19786167  T
Q  146 aaccgcacc 154  Q
     ||||||||    
T  19786166 caccgcacc 19786158  T

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Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 131 - 167
Target Start/End: Complemental strand, 47498460 - 47498424
Alignment:
Q  131 ctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    ||||||||||| |||||||| ||||||||||||||||    
T  47498460 ctcaaaaccgatccaaaccggaccgcgaacaccccta 47498424  T

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Target: chr8 (Bit Score: 69; Significance: 1e-30; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 79 - 167
Target Start/End: Original strand, 12883782 - 12883870
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||| ||||||||||||||||||||||| ||  |||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  12883782 aaccaaaccaaaccgcatacttatttattttgtggttcgaatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 12883870  T

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Target: chr8; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 78 - 167
Target Start/End: Complemental strand, 11218981 - 11218892
Alignment:
Q  78 aaaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    ||||| ||||||| |||||||||||||||||| || ||||||||||||||| |||||||| |||||||||||||||| ||||||||||||    
T  11218981 aaaccaaaccaaatcgcatacttatttatcttgcgtttcggatgacttttagcctcaaaatcgaaccaaaccgcaccccgaacaccccta 11218892  T

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Target: chr8; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 25 - 167
Target Start/End: Original strand, 9012829 - 9012972
Alignment:
Q  25 cgatccaatccaaaccgcattggttaagtttggtttgagttttattttaaaa-taaaccgaaccaaaccgcatacttatttatcttacggttcggatgac 123  Q
    |||||||| ||||||||||||||||  |||||||| |  || |||||||||| | || | |||||||||||| || | |||||||| |||||||| ||||    
T  9012829 cgatccaacccaaaccgcattggtttggtttggttcggattgtattttaaaagtcaatcaaaccaaaccgcacacatttttatcttgcggttcgggtgac 9012928  T
Q  124 ttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    ||||| |||||||| |||||||| || |||||||||||||||||    
T  9012929 ttttagcctcaaaatcgaaccaacccacaccgcgaacaccccta 9012972  T

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Target: chr8; HSP #4
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 79 - 169
Target Start/End: Complemental strand, 10661184 - 10661094
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaat 169  Q
    |||| ||||||||||||| ||| |||||||  ||||| ||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  10661184 aaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaaccaaaccgcaccgcgaacacccctaat 10661094  T

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Target: chr8; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 84 - 164
Target Start/End: Original strand, 24682147 - 24682227
Alignment:
Q  84 aaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccc 164  Q
    |||||||| ||||||||||||||||| |||||||||||| ||||| ||||||||||||||||| ||||||| |||||||||    
T  24682147 aaccaaactgcatacttatttatcttgcggttcggatgaattttagcctcaaaaccgaaccaagccgcaccacgaacaccc 24682227  T

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Target: chr8; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 79 - 167
Target Start/End: Complemental strand, 33068296 - 33068208
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||| ||||||||||||| ||| |||||||| ||||| ||||||||||||  |||||||||||||||||||||||| ||||||||||||    
T  33068296 aaccaaaccaaaccgcatgcttttttatcttgcggtttggatgacttttatgctcaaaaccgaaccaaaccgcaccacgaacaccccta 33068208  T

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Target: chr8; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 44336779 - 44336711
Alignment:
Q  102 tttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaatt 170  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  44336779 tttatcttgcggttcggatgacttttaaactcaaaaccgaaccaaaccgcaccgcgaacactcctaatt 44336711  T

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Target: chr8; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 77 - 167
Target Start/End: Original strand, 15272356 - 15272446
Alignment:
Q  77 taaaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||||| ||||||||||| | ||| |||||| | | ||||||||||||||||| |||||||||| |||||||||||||||||| |||||||    
T  15272356 taaaccaaaccaaaccgcgtgcttttttatcctgccgttcggatgacttttaatctcaaaaccgtaccaaaccgcaccgcgaaaaccccta 15272446  T

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Target: chr8; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 77 - 167
Target Start/End: Original strand, 15452725 - 15452815
Alignment:
Q  77 taaaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||||| ||||||||||| | ||| |||||| | | ||||||||||||||||| |||||||||| |||||||||||||||||| |||||||    
T  15452725 taaaccaaaccaaaccgcgtgcttttttatcctgccgttcggatgacttttaatctcaaaaccgtaccaaaccgcaccgcgaaaaccccta 15452815  T

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Target: chr8; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 79 - 164
Target Start/End: Original strand, 22811225 - 22811310
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccc 164  Q
    |||| |||||||| |||||| |||||||||| | |||| ||||||||||| |||||||| | ||||||||||||||||||||||||    
T  22811225 aaccaaaccaaacagcatacatatttatcttgcagttcagatgacttttagcctcaaaatcaaaccaaaccgcaccgcgaacaccc 22811310  T

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Target: chr8; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 84 - 164
Target Start/End: Complemental strand, 14549249 - 14549169
Alignment:
Q  84 aaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccc 164  Q
    |||||||||||||| || ||||||| |||||| ||||||||||||  |||||||||||| |||||| ||||||||||||||    
T  14549249 aaccaaaccgcatatttttttatctcacggtttggatgacttttatgctcaaaaccgaatcaaaccacaccgcgaacaccc 14549169  T

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Target: chr8; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 78 - 167
Target Start/End: Original strand, 31497660 - 31497749
Alignment:
Q  78 aaaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    ||||| ||||||||||| | ||| |||||||| |||||||||||||||||| | |||||||| ||||||| |||| || |||||||||||    
T  31497660 aaaccaaaccaaaccgcgtgcttttttatcttgcggttcggatgacttttaccttcaaaaccaaaccaaagcgcatcgtgaacaccccta 31497749  T

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Target: chr8; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 87 - 167
Target Start/End: Complemental strand, 4785258 - 4785178
Alignment:
Q  87 caaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||||||||||||| |||||  | ||||||| ||||||||||| |||||||||||||||||  | ||||||||||||||||    
T  4785258 caaaccgcatacttttttattctgcggttcgtatgacttttaatctcaaaaccgaaccaaattgtaccgcgaacaccccta 4785178  T

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Target: chr8; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 168
Target Start/End: Original strand, 18170021 - 18170161
Alignment:
Q  29 ccaatccaaaccgcattggttaagtttggtttgagttttattttaaaa-taaaccgaaccaaaccgcatacttatttatcttacggttcggatgactttt 127  Q
    |||||||||||||||||||||  |||||||||   |    |||||||| | |||||||||||||||||  ||| |||||||  |||||  ||||||||||    
T  18170021 ccaatccaaaccgcattggtttggtttggttttgatgactttttaaaactcaaccgaaccaaaccgcacgcttttttatctcgcggtttagatgactttt 18170120  T
Q  128 aacctcaaaaccgaaccaaaccgcaccgcgaacacccctaa 168  Q
    |   ||||||||||||||||||||||| | |||||||||||    
T  18170121 atgttcaaaaccgaaccaaaccgcacctcaaacacccctaa 18170161  T

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Target: chr8; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 25 - 172
Target Start/End: Complemental strand, 19539468 - 19539320
Alignment:
Q  25 cgatccaatccaaaccgcattggttaagtttggtttgagttttattttaaaa-taaaccgaaccaaaccgcatacttatttatcttacggttcggatgac 123  Q
    |||||||| |||| |||||||||||  |||||||| |  ||||||||||||| | ||||  ||||||||||||   | ||||||||   |||||||| ||    
T  19539468 cgatccaacccaatccgcattggtttggtttggttcggattttattttaaaagtcaaccataccaaaccgcatgtatttttatcttgaagttcggataac 19539369  T
Q  124 ttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaatttt 172  Q
    ||||| || |||||||||||||| || |||| ||||||||| |||||||    
T  19539368 ttttagccccaaaaccgaaccaacccacaccacgaacacccgtaatttt 19539320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 78 - 165
Target Start/End: Complemental strand, 30392170 - 30392083
Alignment:
Q  78 aaaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccc 165  Q
    ||||| ||||||||||||| ||| |||||||  ||||| ||||||||||||  ||||||||||||||  |||||||||| ||||||||    
T  30392170 aaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaaccgcaccgcaccgcaaacacccc 30392083  T

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Target: chr8; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 117 - 172
Target Start/End: Complemental strand, 40436428 - 40436373
Alignment:
Q  117 ggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaatttt 172  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  40436428 ggatcacttttaccctcaaaaccgaaccaaaccgcaccgcgaacacccctattttt 40436373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 86 - 156
Target Start/End: Complemental strand, 11017088 - 11017018
Alignment:
Q  86 ccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgc 156  Q
    ||||||||| ||||| || | |||||||||||||||| ||||| |||||||| ||||||||||||||||||    
T  11017088 ccaaaccgcgtactttttcagcttacggttcggatgaattttagcctcaaaatcgaaccaaaccgcaccgc 11017018  T

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Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 79 - 166
Target Start/End: Complemental strand, 33565987 - 33565898
Alignment:
Q  79 aaccgaaccaaaccgcatac--ttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccct 166  Q
    |||| |||||||||||||||  || |||||||| ||||||  |||||||||| |||||||||| |||||||| ||||||| |||||||||    
T  33565987 aaccaaaccaaaccgcatacttttttttatcttgcggttcaaatgacttttagcctcaaaaccaaaccaaactgcaccgcaaacacccct 33565898  T

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Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 79 - 168
Target Start/End: Original strand, 18633640 - 18633729
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaa 168  Q
    |||||||||||||||||  ||| |||||||  |||||  |||||||||||   ||||||||||||||||||||||| | |||||||||||    
T  18633640 aaccgaaccaaaccgcacgcttttttatctcgcggtttagatgacttttatgttcaaaaccgaaccaaaccgcacctcaaacacccctaa 18633729  T

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Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 78 - 167
Target Start/End: Original strand, 30254182 - 30254271
Alignment:
Q  78 aaaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    ||||||||||||||| ||| |||||||||||| |||||  ||| | ||||| |||||||| | |||||||||||||| ||| ||||||||    
T  30254182 aaaccgaaccaaaccacatgcttatttatcttgcggttttgataatttttagcctcaaaatcaaaccaaaccgcaccacgatcaccccta 30254271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 27 - 149
Target Start/End: Original strand, 7428432 - 7428555
Alignment:
Q  27 atccaatccaaaccgcattggttaagtttggtttgagttttattttaaaa-taaaccgaacc-----aaaccgcatacttatttatcttacggttcggat 120  Q
    |||||||||||||||||||     ||||||||| || ||||||||||||| | |||||||||     ||||||||| | | |||||| | |||||| |||    
T  7428432 atccaatccaaaccgcatt-----agtttggttcgaattttattttaaaagtcaaccgaaccaaaccaaaccgcatgcatttttatcatgcggttcagat 7428526  T
Q  121 gacttttaacctcaaaaccgaaccaaacc 149  Q
    |||||||||||||| ||||||||||||||    
T  7428527 gacttttaacctcataaccgaaccaaacc 7428555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 79 - 167
Target Start/End: Original strand, 36910383 - 36910471
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||| ||| ||||||||| ||| |||||||  |||||  |||||||||||  ||||||| | |||||||||||||||||||||||||||    
T  36910383 aaccaaactaaaccgcatgcttttttatctcgcggttttgatgacttttatgctcaaaatcaaaccaaaccgcaccgcgaacaccccta 36910471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 115 - 170
Target Start/End: Original strand, 1265582 - 1265637
Alignment:
Q  115 tcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaatt 170  Q
    |||| ||| |||||||||||||||||| |||||||| |||||||||||||||||||    
T  1265582 tcggttgatttttaacctcaaaaccgatccaaaccggaccgcgaacacccctaatt 1265637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 115 - 170
Target Start/End: Complemental strand, 37948574 - 37948519
Alignment:
Q  115 tcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaatt 170  Q
    |||| ||| |||||||||||||||||| |||||||| |||||||||||||||||||    
T  37948574 tcggttgatttttaacctcaaaaccgatccaaaccggaccgcgaacacccctaatt 37948519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 79 - 168
Target Start/End: Complemental strand, 8036073 - 8035984
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaa 168  Q
    |||| |||||||| |||| ||| |||||||| |||||| ||||||||||| | || ||||||||  |||| |||||| ||||||||||||    
T  8036073 aaccaaaccaaactgcatgcttttttatcttgcggttcagatgacttttaccttctaaaccgaatgaaactgcaccgtgaacacccctaa 8035984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 115 - 168
Target Start/End: Complemental strand, 43619669 - 43619616
Alignment:
Q  115 tcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaa 168  Q
    |||| ||| |||||||||||||||||| |||||||| |||||||||||||||||    
T  43619669 tcggttgatttttaacctcaaaaccgatccaaaccggaccgcgaacacccctaa 43619616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 79 - 164
Target Start/End: Complemental strand, 44672819 - 44672734
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccc 164  Q
    |||| |||||||||||||  || |||||||  || || ||||||||||||  |||||||||||||||||| ||||||| |||||||    
T  44672819 aaccaaaccaaaccgcatgtttttttatctcgcgatttggatgacttttatgctcaaaaccgaaccaaactgcaccgcaaacaccc 44672734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 115 - 167
Target Start/End: Original strand, 6345773 - 6345825
Alignment:
Q  115 tcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||| ||| |||||||||||||||||| |||||||| ||||||||||||||||    
T  6345773 tcggttgatttttaacctcaaaaccgatccaaaccggaccgcgaacaccccta 6345825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 28073266 - 28073334
Alignment:
Q  102 tttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaatt 170  Q
    ||||| || |||||| ||||||||||| ||| ||| || | ||||||||||||||||||||||||||||    
T  28073266 tttatattgcggttcagatgacttttagccttaaacccaagccaaaccgcaccgcgaacacccctaatt 28073334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 115 - 167
Target Start/End: Complemental strand, 31126890 - 31126838
Alignment:
Q  115 tcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||| ||| |||||||||||||||||| |||||||| ||||||||||||||||    
T  31126890 tcggttgatttttaacctcaaaaccgatccaaaccggaccgcgaacaccccta 31126838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 68 - 164
Target Start/End: Original strand, 37162680 - 37162776
Alignment:
Q  68 attttaaaataaaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccc 164  Q
    |||| ||||| ||||||| ||||||  || ||||||||| || | ||| | |||| |||||| ||||||||| |||||||||||||| |||||||||    
T  37162680 atttaaaaatcaaccgaatcaaacctaatgcttatttattttgcagtttgaatgatttttaatctcaaaaccaaaccaaaccgcaccacgaacaccc 37162776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 79 - 169
Target Start/End: Original strand, 3006624 - 3006714
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaat 169  Q
    |||| ||||||||||||| ||| ||| |||  ||||| |||||| | |||  ||  ||||||||||||||||||||||||||||| |||||    
T  3006624 aaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaaccgcaccgcgaacacctctaat 3006714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 87 - 148
Target Start/End: Complemental strand, 45366330 - 45366269
Alignment:
Q  87 caaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaac 148  Q
    ||||||| || ||| |||||||| ||||||  |||||||||||||||||||||| |||||||    
T  45366330 caaaccgtatgcttttttatcttgcggttcatatgacttttaacctcaaaaccggaccaaac 45366269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 167
Target Start/End: Complemental strand, 3682017 - 3681876
Alignment:
Q  21 aaatcgatccaatccaaaccgcattggttaagtttggtttgagttttattttaaaataaaccgaaccaaaccgcatacttatttatcttacggttcggat 120  Q
    ||||||| ||||||||| ||||||||||| ||||||| | || ||||   | ||| | |||| |||||||||||||  || |||||||  ||||| ||||    
T  3682017 aaatcgaaccaatccaagccgcattggtttagtttggat-gactttt---taaaagtcaaccaaaccaaaccgcatgttt-tttatctcgcggtttggat 3681923  T
Q  121 gacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
     |||||||   |||||||||||||||||||||   ||||||||||||    
T  3681922 aacttttatattcaaaaccgaaccaaaccgcaatacgaacaccccta 3681876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 115 - 167
Target Start/End: Original strand, 4267842 - 4267894
Alignment:
Q  115 tcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||| |||| ||| ||||||||| ||| |||||||||||||||||||||||||    
T  4267842 tcggttgacattttacctcaaaatcgatccaaaccgcaccgcgaacaccccta 4267894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 170
Target Start/End: Original strand, 4603114 - 4603153
Alignment:
Q  131 ctcaaaaccgaaccaaaccgcaccgcgaacacccctaatt 170  Q
    ||||||||||| |||||||| |||||||||||||||||||    
T  4603114 ctcaaaaccgatccaaaccggaccgcgaacacccctaatt 4603153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 170
Target Start/End: Original strand, 32907424 - 32907463
Alignment:
Q  131 ctcaaaaccgaaccaaaccgcaccgcgaacacccctaatt 170  Q
    ||||||||||| |||||||| |||||||||||||||||||    
T  32907424 ctcaaaaccgatccaaaccggaccgcgaacacccctaatt 32907463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 130 - 172
Target Start/End: Complemental strand, 11661001 - 11660959
Alignment:
Q  130 cctcaaaaccgaaccaaaccgcaccgcgaacacccctaatttt 172  Q
    ||||| |||||| || |||||||||||||||||||||||||||    
T  11661001 cctcataaccgagccgaaccgcaccgcgaacacccctaatttt 11660959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 167
Target Start/End: Original strand, 5803298 - 5803386
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||| ||||||||||||| ||| ||| |||  ||||| |||||| | |||  ||  ||| ||||||||||||||| |||||||||||||    
T  5803298 aaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaatcgaaccaaaccgcactgcgaacaccccta 5803386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 163
Target Start/End: Original strand, 6200905 - 6200989
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacc 163  Q
    |||| ||| |||||||||  || |||||||  | ||| |||| |||||||  |||||||||||||||| ||| ||||||||||||    
T  6200905 aaccaaactaaaccgcatgtttttttatctcgcagtttggattacttttatgctcaaaaccgaaccaagccgtaccgcgaacacc 6200989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 120 - 164
Target Start/End: Original strand, 11864012 - 11864056
Alignment:
Q  120 tgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccc 164  Q
    |||| ||| ||||||||||| | ||||||||||||||||||||||    
T  11864012 tgacattttacctcaaaaccaatccaaaccgcaccgcgaacaccc 11864056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 164
Target Start/End: Complemental strand, 30998215 - 30998155
Alignment:
Q  104 tatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccc 164  Q
    ||||||||||||  ||||||||||||| |||||| | |||||| | ||| |||||||||||    
T  30998215 tatcttacggttatgatgacttttaacttcaaaatcaaaccaatctgcatcgcgaacaccc 30998155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 2e-29; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 25 - 169
Target Start/End: Complemental strand, 41461172 - 41461022
Alignment:
Q  25 cgatccaatccaaaccgcattggttaagtttggtttgagttttattttaaaa-taaaccg-----aaccaaaccgcatacttatttatcttacggttcgg 118  Q
    |||| ||||||||||||||||||||  |||||||| || ||||||||||||| | |||||     ||||||||||||||||| |||| ||| ||||||||    
T  41461172 cgattcaatccaaaccgcattggtttggtttggttcgaattttattttaaaagtcaaccgaaccaaaccaaaccgcatacttttttagcttgcggttcgg 41461073  T
Q  119 atgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaat 169  Q
     |||||||||  || ||||||||||||||| ||||||||||||||||||||    
T  41461072 ttgacttttagtctaaaaaccgaaccaaactgcaccgcgaacacccctaat 41461022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 52 - 167
Target Start/End: Complemental strand, 12884589 - 12884473
Alignment:
Q  52 gtttggtttgagttttattttaaaa-taaaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccg 150  Q
    ||||||||||| ||||||||||||| | |||| ||||||||||||||||| |||| | | | ||| |||||||||||||||| |||| ||||||||||||    
T  12884589 gtttggtttgaattttattttaaaagtcaaccaaaccaaaccgcatacttttttaccatgcagtttggatgacttttaaccttaaaatcgaaccaaaccg 12884490  T
Q  151 caccgcgaacaccccta 167  Q
    |||||| |||| |||||    
T  12884489 caccgcaaacatcccta 12884473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 79 - 167
Target Start/End: Original strand, 44979821 - 44979909
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||| ||||||||||||| ||| |||||||  ||||| ||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  44979821 aaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaaccaaaccgcaccgcgaacaccccta 44979909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 34 - 167
Target Start/End: Original strand, 27301485 - 27301624
Alignment:
Q  34 ccaaaccgcattggttaagtttggtttgagttttattttaaaa-taaaccgaa-----ccaaaccgcatacttatttatcttacggttcggatgactttt 127  Q
    ||||||||||||||||  ||||||||  | ||||||||||||| | |||||||     ||||||||||| ||| |||||||| |||| |||||| |||||    
T  27301485 ccaaaccgcattggtttggtttggttcaaattttattttaaaagtcaaccgaatcaaaccaaaccgcatgcttttttatcttgcggtccggatggctttt 27301584  T
Q  128 aacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    || |||||||||||||||||| ||| ||||||||||||||    
T  27301585 aatctcaaaaccgaaccaaactgcagcgcgaacaccccta 27301624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 87 - 169
Target Start/End: Original strand, 12041649 - 12041731
Alignment:
Q  87 caaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaat 169  Q
    ||||||||||  || ||||||||||||||| ||||||||||| |||||||||||||||||||| |||||| ||||||||||||    
T  12041649 caaaccgcatgtttttttatcttacggttcagatgacttttagcctcaaaaccgaaccaaaccacaccgcaaacacccctaat 12041731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 25 - 165
Target Start/End: Complemental strand, 28790596 - 28790450
Alignment:
Q  25 cgatccaatccaaaccgcattggttaagtttggtttgagttttattttaaaa-taaaccgaacc-----aaaccgcatacttatttatcttacggttcgg 118  Q
    |||||| | ||||||| ||||||||  ||||||||||  ||||||||||||| | ||||||| |     ||||||||| ||| |||||||| |||||| |    
T  28790596 cgatccgacccaaaccacattggtttggtttggtttggattttattttaaaagtcaaccgaatctaatcaaaccgcatgcttttttatcttgcggttcag 28790497  T
Q  119 atgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccc 165  Q
    |||||||||||| ||||||| ||||||||||||||| ||||||||||    
T  28790496 atgacttttaacatcaaaactgaaccaaaccgcaccacgaacacccc 28790450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 79 - 167
Target Start/End: Original strand, 42785681 - 42785769
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||| ||||||||||||| ||| ||||||| ||| || ||||||||||||  ||||||| |||||||||||||||||||||||||||||    
T  42785681 aaccaaaccaaaccgcatccttttttatctcacgatttggatgacttttatgctcaaaatcgaaccaaaccgcaccgcgaacaccccta 42785769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 79 - 170
Target Start/End: Original strand, 5862683 - 5862774
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaatt 170  Q
    |||| ||||||||||||||||| ||||| || || ||  ||||||||||| |||||||| | || |||||||||||||||||||||||||||    
T  5862683 aaccaaaccaaaccgcatacttttttattttgcgatttagatgacttttaccctcaaaatcaaatcaaaccgcaccgcgaacacccctaatt 5862774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 51 - 167
Target Start/End: Original strand, 15320597 - 15320719
Alignment:
Q  51 agtttggtttgagttttattttaaaa-taaaccgaaccaaacc-----gcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaacc 144  Q
    |||||||||||  ||||||||||||| | ||| ||||||||||     |||| ||| ||||  | |||||| |||||||||||| |||||||| ||||||    
T  15320597 agtttggtttggattttattttaaaaatcaactgaaccaaacctaactgcatgcttttttacttcacggtttggatgacttttagcctcaaaatcgaacc 15320696  T
Q  145 aaaccgcaccgcgaacaccccta 167  Q
    |||||||||||||||||||||||    
T  15320697 aaaccgcaccgcgaacaccccta 15320719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 79 - 168
Target Start/End: Complemental strand, 17762772 - 17762683
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaa 168  Q
    |||| |||||||||||||  || |||||||  |||||||| ||||||||| |||||||||| ||| ||||| ||||||||||||||||||    
T  17762772 aaccaaaccaaaccgcatgtttttttatctcgcggttcggttgacttttagcctcaaaaccaaacaaaaccacaccgcgaacacccctaa 17762683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 67 - 167
Target Start/End: Complemental strand, 12841589 - 12841488
Alignment:
Q  67 tattttaaaata-aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccc 165  Q
    |||||||||||  |||| ||||||||||||| | | ||||||||||| |||  |||| |||||| ||||||||||||| |||| ||||||| ||||||||    
T  12841589 tattttaaaattcaaccaaaccaaaccgcatgcatttttatcttacgattcatatgatttttaatctcaaaaccgaacaaaactgcaccgcaaacacccc 12841490  T
Q  166 ta 167  Q
    ||    
T  12841489 ta 12841488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 102 - 169
Target Start/End: Original strand, 19937199 - 19937266
Alignment:
Q  102 tttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaat 169  Q
    |||||||  ||||| ||||||||||||  |||||| || |||||||||||||||||||||||||||||    
T  19937199 tttatctcgcggtttggatgacttttatgctcaaatcctaaccaaaccgcaccgcgaacacccctaat 19937266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 79 - 169
Target Start/End: Original strand, 17916903 - 17916993
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaat 169  Q
    |||| |||||||||||||  || ||||||| |  ||| |||| |||||||  |||||||| |||||||| |||||||||||||||||||||    
T  17916903 aaccaaaccaaaccgcatgtttttttatctcaaagtttggataacttttatgctcaaaactgaaccaaatcgcaccgcgaacacccctaat 17916993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 79 - 164
Target Start/End: Complemental strand, 44035337 - 44035251
Alignment:
Q  79 aaccgaaccaaaccgcatacttattt-atcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccc 164  Q
    |||| ||||||||||||| ||| ||| || || ||||| ||||||||||||  ||||||||||||||||||||| | ||||||||||    
T  44035337 aaccaaaccaaaccgcatgctttttttattttgcggtttggatgacttttatgctcaaaaccgaaccaaaccgccctgcgaacaccc 44035251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 79 - 167
Target Start/End: Complemental strand, 44085520 - 44085431
Alignment:
Q  79 aaccgaaccaaaccgcatacttattt-atcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||| ||||||||||||| ||| ||| ||||| |||||| ||||||||| | ||||||||| |||||||||||||   ||||||||||||    
T  44085520 aaccaaaccaaaccgcatgctttttttatcttgcggttcagatgactttaaccctcaaaactgaaccaaaccgcatgacgaacaccccta 44085431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 79 - 167
Target Start/End: Original strand, 36413692 - 36413780
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||| ||||||||||||| ||| ||| |||  ||||| |||||| | |||  ||  |||||||||||||||||||||||||||||||||    
T  36413692 aaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaaccgcaccgcgaacaccccta 36413780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 135 - 170
Target Start/End: Complemental strand, 9811365 - 9811330
Alignment:
Q  135 aaaccgaaccaaaccgcaccgcgaacacccctaatt 170  Q
    ||||||||||||||||||||||||||||||||||||    
T  9811365 aaaccgaaccaaaccgcaccgcgaacacccctaatt 9811330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 118 - 164
Target Start/End: Original strand, 25298342 - 25298388
Alignment:
Q  118 gatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccc 164  Q
    |||||||||||  |||||||||||||||||| |||||||||||||||    
T  25298342 gatgacttttatgctcaaaaccgaaccaaactgcaccgcgaacaccc 25298388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 111 - 169
Target Start/End: Original strand, 36500713 - 36500771
Alignment:
Q  111 cggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaat 169  Q
    |||||||||||||||||| ||||||||||||| ||||||||   ||||||||| |||||    
T  36500713 cggttcggatgacttttagcctcaaaaccgaatcaaaccgctttgcgaacacctctaat 36500771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 52 - 171
Target Start/End: Complemental strand, 1331073 - 1330948
Alignment:
Q  52 gtttggtttgagttttattttaaaa-taaaccgaaccaaacc-----gcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaacca 145  Q
    ||||||||||  ||||||||||||| | ||||||||||||||     |||| ||| |||| |||  ||||||||||| ||||   || ||||||||| ||    
T  1331073 gtttggtttggattttattttaaaagtcaaccgaaccaaaccaatctgcatgcttttttaccttgtggttcggatgatttttcgtcttaaaaccgaatca 1330974  T
Q  146 aaccgcaccgcgaacacccctaattt 171  Q
    ||||||| ||| ||||||||||||||    
T  1330973 aaccgcatcgcaaacacccctaattt 1330948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 118 - 167
Target Start/End: Complemental strand, 18356895 - 18356846
Alignment:
Q  118 gatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||||||||||  ||||||||||||||||| ||||||||||||| |||||    
T  18356895 gatgacttttatgctcaaaaccgaaccaaatcgcaccgcgaacatcccta 18356846  T

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Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 115 - 164
Target Start/End: Complemental strand, 21351929 - 21351880
Alignment:
Q  115 tcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccc 164  Q
    |||| |||| ||| ||||||||||||| ||||||||||||||||||||||    
T  21351929 tcggttgacattttacctcaaaaccgatccaaaccgcaccgcgaacaccc 21351880  T

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Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 167
Target Start/End: Complemental strand, 16578666 - 16578578
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||| ||||||||||||| ||| ||| |||  ||||| |||||| | |||  ||  |||||||||||||||||| ||||||||||||||    
T  16578666 aaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaaccgcatcgcgaacaccccta 16578578  T

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Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 124 - 167
Target Start/End: Original strand, 16672493 - 16672536
Alignment:
Q  124 ttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||||||||||||||||| |||||||| ||||| ||||||||||    
T  16672493 ttttaacctcaaaaccgatccaaaccggaccgcaaacaccccta 16672536  T

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Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 84 - 138
Target Start/End: Complemental strand, 36075425 - 36075371
Alignment:
Q  84 aaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaac 138  Q
    ||||||||| ||| ||| |||||| | |||||||||| |||||||||||||||||    
T  36075425 aaccaaaccacatgcttttttatcctgcggttcggataacttttaacctcaaaac 36075371  T

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Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 117 - 170
Target Start/End: Complemental strand, 42462286 - 42462233
Alignment:
Q  117 ggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaatt 170  Q
    ||||||||||||  |||||||||||||||||||| | | | |||||||||||||    
T  42462286 ggatgacttttagtctcaaaaccgaaccaaaccgtatcacaaacacccctaatt 42462233  T

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Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 125 - 169
Target Start/End: Original strand, 13716446 - 13716490
Alignment:
Q  125 tttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaat 169  Q
    |||| |||||||||||||| |||||||||| | ||||||||||||    
T  13716446 tttagcctcaaaaccgaactaaaccgcaccacaaacacccctaat 13716490  T

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Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 131 - 167
Target Start/End: Original strand, 18512065 - 18512101
Alignment:
Q  131 ctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    ||||||||||| |||||||| ||||||||||||||||    
T  18512065 ctcaaaaccgatccaaaccggaccgcgaacaccccta 18512101  T

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Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 28 - 76
Target Start/End: Original strand, 20985896 - 20985944
Alignment:
Q  28 tccaatccaaaccgcattggttaagtttggtttgagttttattttaaaa 76  Q
    |||||||||||||||||| |||  ||||||||||  |||||||||||||    
T  20985896 tccaatccaaaccgcattagtttggtttggtttggattttattttaaaa 20985944  T

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Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 42785618 - 42785658
Alignment:
Q  22 aatcgatccaatccaaaccgcattggttaagtttggtttga 62  Q
    |||||| |||||||||||||||||||||  |||||||||||    
T  42785618 aatcgaaccaatccaaaccgcattggtttggtttggtttga 42785658  T

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Target: scaffold0204 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 25 - 166
Target Start/End: Complemental strand, 25953 - 25807
Alignment:
Q  25 cgatccaatccaaaccgcattggttaagtttggtttgagttttattttaaaa-taaaccgaaccaaacc-----gcatacttatttatcttacggttcgg 118  Q
    ||||||||| |||||||||||| ||  ||||||||||  ||||||||||||| | ||||||||||||||     ||||  || |||||||||||||||||    
T  25953 cgatccaattcaaaccgcattgatttggtttggtttggattttattttaaaagtcaaccgaaccaaaccaaactgcatgttt-tttatcttacggttcgg 25855  T
Q  119 atgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccct 166  Q
    |||||||||||||| ||||||||||||||| ||||||| || ||||||    
T  25854 atgacttttaaccttaaaaccgaaccaaactgcaccgcaaatacccct 25807  T

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Target: scaffold0204; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 79 - 167
Target Start/End: Complemental strand, 14553 - 14465
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||| ||||||| ||||| ||| |||||||| |||||||||||||||||||| ||||||| ||||||||||||||||| ||||| ||||    
T  14553 aaccaaaccaaatcgcatgcttttttatcttgcggttcggatgacttttaacttcaaaactgaaccaaaccgcaccgcaaacactccta 14465  T

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Target: scaffold0029 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 78 - 167
Target Start/End: Original strand, 40636 - 40725
Alignment:
Q  78 aaaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    ||||| |||||||||||||   | ||||||| |||||| |||||||| |||  |||||||||||||||||||||||||||||||||||||    
T  40636 aaaccaaaccaaaccgcatgagtttttatctcacggtttggatgactattatgctcaaaaccgaaccaaaccgcaccgcgaacaccccta 40725  T

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Target: scaffold0059 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 79 - 167
Target Start/End: Original strand, 69592 - 69680
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||| ||||||||| ||| ||| |||||||  ||||| ||||||||||||  ||||||| |||||||||||||||||||||||||||||    
T  69592 aaccaaaccaaaccacatgcttttttatctcgcggtttggatgacttttatgctcaaaatcgaaccaaaccgcaccgcgaacaccccta 69680  T

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Target: scaffold0013 (Bit Score: 49; Significance: 8e-19; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 79 - 167
Target Start/End: Complemental strand, 106060 - 105972
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||| ||||||||| ||| ||| |||||||| ||||| |||||||||||   ||||||| |||||||||||||||||||||||||||||    
T  106060 aaccaaaccaaaccacatgcttttttatcttgcggtttggatgacttttttgctcaaaatcgaaccaaaccgcaccgcgaacaccccta 105972  T

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Target: scaffold0013; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 79 - 167
Target Start/End: Complemental strand, 128667 - 128579
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||| ||||||||| ||| ||| |||||||| ||||| ||||||||||||  ||||||| |||||||||||||||||| ||||||||||    
T  128667 aaccaaaccaaaccacatgcttttttatcttgcggtttggatgacttttatgctcaaaatcgaaccaaaccgcaccgcaaacaccccta 128579  T

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Target: scaffold0688 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0688
Description:

Target: scaffold0688; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 102 - 149
Target Start/End: Complemental strand, 1166 - 1119
Alignment:
Q  102 tttatcttacggttcggatgacttttaacctcaaaaccgaaccaaacc 149  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||    
T  1166 tttatcttgcggttcggatgacttttagcctcaaaaccgaaccaaacc 1119  T

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Target: scaffold0688; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 102 - 149
Target Start/End: Complemental strand, 7735 - 7688
Alignment:
Q  102 tttatcttacggttcggatgacttttaacctcaaaaccgaaccaaacc 149  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||    
T  7735 tttatcttgcggttcggatgacttttagcctcaaaaccgaaccaaacc 7688  T

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Target: scaffold0308 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 79 - 169
Target Start/End: Original strand, 5935 - 6025
Alignment:
Q  79 aaccgaaccaaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacacccctaat 169  Q
    |||| ||||||||||||| ||| ||| |||  ||||| |||||| | |||  ||  ||| |||||||||||||||||||||||||||||||    
T  5935 aaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaatcgaaccaaaccgcaccgcgaacacccctaat 6025  T

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Target: scaffold0015 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 87 - 154
Target Start/End: Complemental strand, 62422 - 62355
Alignment:
Q  87 caaaccgcatacttatttatcttacggttcggatgacttttaacctcaaaaccgaaccaaaccgcacc 154  Q
    |||||||||||||| |||| |||||||||| |||||  |||| |||||||| ||||||  ||||||||    
T  62422 caaaccgcatacttttttagcttacggttcagatgaaatttagcctcaaaatcgaaccgcaccgcacc 62355  T

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Target: scaffold0396 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 115 - 167
Target Start/End: Complemental strand, 895 - 843
Alignment:
Q  115 tcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 167  Q
    |||| |||| ||| ||||||||||||| |||||||| |||| |||||||||||    
T  895 tcggttgacattttacctcaaaaccgatccaaaccggaccgtgaacaccccta 843  T

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