View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7826_high_55 (Length: 234)
Name: NF7826_high_55
Description: NF7826
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7826_high_55 |
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Alignment Details
Target: chr1 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 2 - 226
Target Start/End: Original strand, 51319261 - 51319485
Alignment:
| Q |
2 |
caagatctttgtagcaaggagcattttcttcgaaagctaacatattgtttgtaaatatataaatgagttagattgtttgactaatgtaacaaaattactg |
101 |
Q |
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| T |
51319261 |
caagatctttgtagcaaggagcattttcttcgaaagctaacatattgtttgtaaatatataaatgagttagattgtttgactaatgtaacaaaattactg |
51319360 |
T |
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| Q |
102 |
attcggaaattaatttttattcatgatatatatagtcgatcaataaaagttagtccacaagtataaggtgggagaactaacgtgattgagcaagcaattg |
201 |
Q |
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| T |
51319361 |
attcggaaattaatttttattcatgatatatatagtcgatcaataaaagttagtccacaagtataaggtgggagaactaacgtgattgagcaagcaattg |
51319460 |
T |
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| Q |
202 |
caaggcatttagtccattttcattt |
226 |
Q |
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||||||||||||||||||||||||| |
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| T |
51319461 |
caaggcatttagtccattttcattt |
51319485 |
T |
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