View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7826_low_16 (Length: 458)
Name: NF7826_low_16
Description: NF7826
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7826_low_16 |
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Alignment Details
Target: chr8 (Bit Score: 405; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 405; E-Value: 0
Query Start/End: Original strand, 14 - 442
Target Start/End: Complemental strand, 26067099 - 26066671
Alignment:
| Q |
14 |
gaaggtgatcgtcatgttttcaagtcatttctttacatcatgaacatgctgacagataggaaaaagacttacatcgagacttactatgaggtatattcaa |
113 |
Q |
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| T |
26067099 |
gaaggtgatcgtcatgttttcaagtcatttctttacatcatgaacatgctgacagatagaaaaaagacttacatcgagacttactacgaggtatattcaa |
26067000 |
T |
|
| Q |
114 |
cttcttccctctcttgtaagaatatttagacaataatatattcttttaatcatgtggttcagacattcattctaaccatacattgttgaacttctttagg |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26066999 |
cttcttccctctcttgtaagaatatttagacaataatatattcttttaatcatgtggttcagacattcattctaaccatacattgttgaacttctttagg |
26066900 |
T |
|
| Q |
214 |
ctgctgcacttttggagggtcacacagatcttcaagatgagttaattatgttttttcctggtgtttaatgagtggaggcctctagggtggataaccaaaa |
313 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26066899 |
ctgctgcacttttggagggtcacacagatcttcaagatgagttaattatgttttttcctggtgtttaatgagtggaggcctctagggtggataaccaaaa |
26066800 |
T |
|
| Q |
314 |
caagaaactagatggtgtgctattttcaataattatttaaactttgtatgacttctgaatcaacataaaactatgtttgcattataactactgtattttg |
413 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| |
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| T |
26066799 |
caagaaactagatggtgtgctattttcaataattatttaaactttgtatgacttctgaaacaacataaaactatgtttgcattataactactgcgttttg |
26066700 |
T |
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| Q |
414 |
gaggttttaaatttgttaaaggcataatt |
442 |
Q |
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| ||||||||||||||||||||||||||| |
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| T |
26066699 |
gtggttttaaatttgttaaaggcataatt |
26066671 |
T |
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