View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7826_low_18 (Length: 423)
Name: NF7826_low_18
Description: NF7826
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7826_low_18 |
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Alignment Details
Target: chr7 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 68 - 407
Target Start/End: Complemental strand, 22385237 - 22384891
Alignment:
| Q |
68 |
cattgttcaaatggatctttgatgaatacataaatattttaccacaaaaacacacacagatcaaacattttctttatttnnnnnnnnt-taaaacaataa |
166 |
Q |
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| T |
22385237 |
cattgttcaaatggatctttgatgaatacataaattttttaccacaaaaacacacacagatcaaacattttctttatttaaaaaaaaaataaaacaataa |
22385138 |
T |
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| Q |
167 |
aagtaggaaaattaatcaagcactaggaaaggaacttgaatatgatcctagaaaaaatttgaaggagatttacattgtgcaatgcaaattgatatactca |
266 |
Q |
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| T |
22385137 |
aagtaggaaaattaatcaagcactaggaaaggaacttgaatatgatcctagaaaaaatttgaaggagatttacattgtgcaatgcatattgatatactca |
22385038 |
T |
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| Q |
267 |
taaaatagaaacattttacacagaa-aaaacacttttttggatacccttttccaagtg-------gaagaagaattgttgttgaagaaaagaaaagcaat |
358 |
Q |
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| T |
22385037 |
taaaatagaaacattttacacagaaaaaaacactttttaggatacccttttccaagtggaaaaaagaagaagaattgttgttgaagaaaagaaaagcaat |
22384938 |
T |
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| Q |
359 |
gaagaattttcaaacctagtgaatatagtactatgttgtatgaatgtct |
407 |
Q |
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| T |
22384937 |
gaagaattttcaaacctagtga--atagtactatgttgtatgaatgtct |
22384891 |
T |
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