View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7826_low_37 (Length: 294)
Name: NF7826_low_37
Description: NF7826
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7826_low_37 |
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Alignment Details
Target: chr3 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 11 - 282
Target Start/End: Original strand, 30711424 - 30711695
Alignment:
| Q |
11 |
tgtttataaggaggttttcaaaaattaacttaacaaaaggtgggtggccattgtatgaattaccattgtttgacaaaagcaatggtgaaaaatgatcatg |
110 |
Q |
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| T |
30711424 |
tgtttataaggaggttttcaaaaattaacttaacaaaaggtgggtggccattgtatgaattaccattgtttgacaaaagcaacagtgaaaaatgatcatg |
30711523 |
T |
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| Q |
111 |
aaatattgcaaagcaaacatgaaacaacattgtgtatgttatggagatatataactcaagttgctccttggaaaaaccgaaaagaatgcaattgtgctta |
210 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
30711524 |
aaatattgcaaagcaaacatgaaacaacattgtgtatgttatggagatatataactcaagttgctccttggaaaaactgaaaagaatgcaattgtgctta |
30711623 |
T |
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| Q |
211 |
gatttaaataagcatgaacaatcaaagcatacattcacagagataattcacaatgatatgaagaattttttg |
282 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30711624 |
gatttaaataagcatgaacaatcaaagcatacattcacagagataattcacaatgatatgaagaattttttg |
30711695 |
T |
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