View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7826_low_39 (Length: 290)
Name: NF7826_low_39
Description: NF7826
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7826_low_39 |
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Alignment Details
Target: chr8 (Bit Score: 249; Significance: 1e-138; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 16 - 272
Target Start/End: Complemental strand, 9121337 - 9121081
Alignment:
| Q |
16 |
atcggcccaaacaccccattcacatagcttcgtcaaagccgaaccgcttgaatacggaaccggtaaaaccgaaccggtgtgattataactaacaacattc |
115 |
Q |
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| T |
9121337 |
atcggcccaaacaccccattcacatagcttcgtcaaagccgaaccgcttgaatacggaaccggtaaaaccgaaccggtgtgattataactaacaacattc |
9121238 |
T |
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| Q |
116 |
ataagaaactgataataaagcaaaacatcaccgtttaaacttggaatatttttgaacttgtctctgaacccggcccaaccacgaaaatcatcgatacata |
215 |
Q |
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| T |
9121237 |
ataagaaactgataataaagcaaaacgtcaccgtttaaacttggaatatttttgaacttgtctcggaacccggcccaaccacgaaaatcatcgatacata |
9121138 |
T |
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| Q |
216 |
gaatctgagtttttaaaccgaaccgttgagttaactcggccatgtgaaccgctgaag |
272 |
Q |
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| T |
9121137 |
gaatctgagtttttaaaccgaaccgttgagttaactcggccatgtgaaccgctgaag |
9121081 |
T |
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