View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7829A_low_123 (Length: 340)
Name: NF7829A_low_123
Description: NF7829A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7829A_low_123 |
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Alignment Details
Target: chr5 (Bit Score: 288; Significance: 1e-161; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 1 - 320
Target Start/End: Original strand, 19190300 - 19190619
Alignment:
| Q |
1 |
gtggaggtaatggtggtggttattgttctaatggtcgttgtggtggtggttatgggaataataacgagagcgggtagggaggtggacgttttggtggtgg |
100 |
Q |
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| T |
19190300 |
gtggagctactggtggtggttatggttctaatggtcgttccggtggtggttatgggaataataacgagagcgggtatggaggtggacgttttggtggtgg |
19190399 |
T |
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| Q |
101 |
ttatggttccgatgaccgttctggtggtggttatggcgctaatgaccgttatgagagtggatatgggcgttctgggggtggatatggtgatggagggcgt |
200 |
Q |
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| T |
19190400 |
ttatggttccgatgaccgttctggtggtggttatggcgctaatgaccgttatgagagtggatatgggcgttctggtggtggatatggtgatggagggcgt |
19190499 |
T |
|
| Q |
201 |
acgagtattggtggatatggcgaagaaaaccgttctagtggtggctatggatatggagggcgttctagtggttacggtaatgagcaaagttttggagggt |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
19190500 |
tcgagtattggtggatatggcgaagaaaaccgttctagtggtggctatggatatggagggcgttctagtggttacggtaatgagcaaagttttggagggt |
19190599 |
T |
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| Q |
301 |
atggtagggatggtcgtgat |
320 |
Q |
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|||||||||||||||||||| |
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| T |
19190600 |
atggtagggatggtcgtgat |
19190619 |
T |
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