View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7829A_low_124 (Length: 340)

Name: NF7829A_low_124
Description: NF7829A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7829A_low_124
NF7829A_low_124
[»] chr6 (26 HSPs)
chr6 (1-159)||(15576530-15576688)
chr6 (161-338)||(25991852-25992029)
chr6 (158-338)||(5994698-5994879)
chr6 (159-338)||(23925335-23925514)
chr6 (158-338)||(33298084-33298263)
chr6 (159-296)||(25550295-25550432)
chr6 (159-301)||(13825703-13825845)
chr6 (159-296)||(5004061-5004198)
chr6 (159-296)||(30824457-30824594)
chr6 (159-296)||(25506469-25506606)
chr6 (159-290)||(35091610-35091741)
chr6 (159-296)||(11279837-11279974)
chr6 (158-288)||(15391547-15391677)
chr6 (21-155)||(15574462-15574599)
chr6 (157-263)||(13490191-13490297)
chr6 (159-211)||(5489132-5489184)
chr6 (158-220)||(11053701-11053764)
chr6 (15-93)||(16526916-16526994)
chr6 (218-286)||(26526640-26526708)
chr6 (1-62)||(12972821-12972883)
chr6 (159-220)||(30114444-30114505)
chr6 (265-338)||(5489051-5489124)
chr6 (101-155)||(17860886-17860940)
chr6 (229-282)||(15140726-15140779)
chr6 (229-282)||(23985047-23985100)
chr6 (229-282)||(28127457-28127510)
[»] chr4 (17 HSPs)
chr4 (158-338)||(12996475-12996655)
chr4 (157-338)||(52295602-52295784)
chr4 (159-338)||(27343577-27343756)
chr4 (158-296)||(8094210-8094348)
chr4 (159-296)||(8103016-8103153)
chr4 (159-296)||(4523608-4523745)
chr4 (159-338)||(21532190-21532369)
chr4 (159-284)||(12428418-12428543)
chr4 (159-232)||(10638328-10638400)
chr4 (158-253)||(33188765-33188859)
chr4 (159-284)||(3424331-3424454)
chr4 (257-338)||(10638404-10638485)
chr4 (21-87)||(15787861-15787927)
chr4 (214-263)||(12402907-12402956)
chr4 (210-282)||(19772241-19772313)
chr4 (229-282)||(19647352-19647405)
chr4 (278-338)||(10814333-10814393)
[»] scaffold0156 (1 HSPs)
scaffold0156 (159-338)||(35242-35421)
[»] scaffold0016 (1 HSPs)
scaffold0016 (158-338)||(23463-23644)
[»] chr7 (19 HSPs)
chr7 (158-338)||(10439936-10440116)
chr7 (159-290)||(18304326-18304457)
chr7 (159-296)||(12978455-12978592)
chr7 (158-296)||(4952325-4952463)
chr7 (158-296)||(13831499-13831637)
chr7 (158-296)||(13839530-13839668)
chr7 (159-255)||(30244775-30244871)
chr7 (158-220)||(4941581-4941643)
chr7 (15-155)||(21471316-21471459)
chr7 (158-284)||(21662962-21663089)
chr7 (159-263)||(30245568-30245672)
chr7 (167-263)||(30255420-30255516)
chr7 (3-155)||(5721920-5722077)
chr7 (230-285)||(1955691-1955746)
chr7 (15-74)||(7955796-7955855)
chr7 (21-70)||(1074076-1074125)
chr7 (229-282)||(20114066-20114119)
chr7 (229-282)||(38247996-38248049)
chr7 (23-75)||(16166702-16166754)
[»] chr8 (20 HSPs)
chr8 (159-301)||(17973565-17973707)
chr8 (158-296)||(39837490-39837628)
chr8 (159-296)||(25579740-25579877)
chr8 (159-296)||(30938282-30938419)
chr8 (158-337)||(26873490-26873670)
chr8 (159-337)||(26875940-26876119)
chr8 (159-288)||(39845541-39845670)
chr8 (158-296)||(17664568-17664706)
chr8 (159-296)||(1407001-1407138)
chr8 (159-291)||(4839715-4839847)
chr8 (159-296)||(17683724-17683861)
chr8 (1-155)||(16052715-16052873)
chr8 (158-261)||(4582203-4582306)
chr8 (158-220)||(6670710-6670772)
chr8 (26-84)||(22894996-22895054)
chr8 (21-94)||(28901797-28901869)
chr8 (159-216)||(6663042-6663099)
chr8 (159-216)||(6743444-6743501)
chr8 (229-285)||(23090611-23090667)
chr8 (229-285)||(25700273-25700329)
[»] chr3 (31 HSPs)
chr3 (159-338)||(50824352-50824535)
chr3 (159-338)||(50851325-50851508)
chr3 (158-334)||(14538494-14538671)
chr3 (158-338)||(27341220-27341401)
chr3 (159-338)||(2211239-2211418)
chr3 (158-296)||(8154572-8154710)
chr3 (158-296)||(41006555-41006693)
chr3 (158-296)||(41015335-41015473)
chr3 (158-301)||(9525357-9525500)
chr3 (159-301)||(9555031-9555173)
chr3 (159-338)||(28470103-28470282)
chr3 (158-284)||(17933654-17933780)
chr3 (161-285)||(43470492-43470615)
chr3 (158-284)||(17919198-17919324)
chr3 (159-223)||(17628265-17628329)
chr3 (158-284)||(16816145-16816269)
chr3 (159-285)||(21186747-21186872)
chr3 (163-261)||(18349560-18349658)
chr3 (158-261)||(8197659-8197762)
chr3 (159-255)||(30445-30541)
chr3 (1-155)||(11520659-11520817)
chr3 (159-253)||(18039011-18039105)
chr3 (229-282)||(13272670-13272723)
chr3 (229-282)||(4505979-4506032)
chr3 (244-285)||(16288692-16288733)
chr3 (229-282)||(17657630-17657683)
chr3 (229-282)||(27976552-27976605)
chr3 (228-284)||(1477758-1477814)
chr3 (3-74)||(5632928-5633000)
chr3 (158-186)||(6958978-6959006)
chr3 (238-282)||(17618130-17618174)
[»] scaffold0002 (1 HSPs)
scaffold0002 (159-296)||(121228-121365)
[»] scaffold0497 (1 HSPs)
scaffold0497 (159-338)||(10993-11171)
[»] chr5 (33 HSPs)
chr5 (159-338)||(29186164-29186343)
chr5 (158-338)||(20372799-20372979)
chr5 (159-338)||(20398521-20398700)
chr5 (158-332)||(23349968-23350142)
chr5 (158-296)||(24956774-24956912)
chr5 (158-296)||(24965237-24965375)
chr5 (159-296)||(43597974-43598111)
chr5 (159-296)||(43603466-43603603)
chr5 (159-296)||(43608958-43609095)
chr5 (156-296)||(1728087-1728227)
chr5 (159-338)||(31410890-31411069)
chr5 (158-296)||(28852549-28852687)
chr5 (159-296)||(28843940-28844077)
chr5 (159-286)||(31421789-31421916)
chr5 (159-270)||(19223555-19223666)
chr5 (1-155)||(17027056-17027213)
chr5 (3-74)||(24841367-24841439)
chr5 (1-147)||(22754483-22754633)
chr5 (162-255)||(41099745-41099838)
chr5 (4-84)||(11274790-11274871)
chr5 (1-87)||(19331160-19331247)
chr5 (238-284)||(23028007-23028053)
chr5 (237-283)||(23037923-23037969)
chr5 (159-208)||(21929236-21929285)
chr5 (229-282)||(21988620-21988673)
chr5 (229-282)||(21997264-21997317)
chr5 (229-282)||(23606368-23606421)
chr5 (229-282)||(23635076-23635129)
chr5 (229-282)||(23829022-23829075)
chr5 (229-282)||(23837763-23837816)
chr5 (229-282)||(31550458-31550511)
chr5 (229-285)||(21852579-21852635)
chr5 (229-285)||(21869103-21869159)
[»] scaffold0632 (1 HSPs)
scaffold0632 (159-338)||(4390-4570)
[»] scaffold0111 (1 HSPs)
scaffold0111 (159-332)||(33035-33208)
[»] scaffold0173 (1 HSPs)
scaffold0173 (158-338)||(815-995)
[»] chr2 (30 HSPs)
chr2 (187-338)||(35037884-35038035)
chr2 (158-296)||(15944485-15944623)
chr2 (158-296)||(35138592-35138730)
chr2 (158-296)||(35146928-35147066)
chr2 (158-296)||(41233772-41233910)
chr2 (159-296)||(14582925-14583062)
chr2 (159-296)||(15953000-15953137)
chr2 (159-296)||(38168285-38168422)
chr2 (158-296)||(20621517-20621655)
chr2 (158-296)||(42565857-42565995)
chr2 (159-296)||(42574481-42574618)
chr2 (159-261)||(17687361-17687463)
chr2 (159-287)||(20372251-20372378)
chr2 (159-270)||(25483601-25483712)
chr2 (159-270)||(25491207-25491318)
chr2 (159-254)||(44372705-44372800)
chr2 (159-254)||(44388616-44388711)
chr2 (159-284)||(35303737-35303862)
chr2 (159-263)||(27606606-27606709)
chr2 (159-261)||(24285696-24285798)
chr2 (159-261)||(42249418-42249520)
chr2 (161-261)||(26903296-26903396)
chr2 (159-261)||(34070567-34070669)
chr2 (158-261)||(24292371-24292475)
chr2 (208-285)||(18989312-18989389)
chr2 (159-220)||(21322814-21322875)
chr2 (3-76)||(22389192-22389265)
chr2 (3-57)||(39730111-39730166)
chr2 (159-209)||(20917520-20917570)
chr2 (229-282)||(27683381-27683434)
[»] scaffold0083 (1 HSPs)
scaffold0083 (159-287)||(15813-15941)
[»] chr1 (21 HSPs)
chr1 (159-338)||(32137640-32137819)
chr1 (158-296)||(3432818-3432956)
chr1 (158-296)||(31548522-31548660)
chr1 (159-296)||(31539954-31540091)
chr1 (159-330)||(41746586-41746758)
chr1 (159-296)||(35103992-35104129)
chr1 (158-284)||(29221429-29221554)
chr1 (159-284)||(44320132-44320257)
chr1 (1-84)||(23223131-23223215)
chr1 (159-261)||(21498861-21498963)
chr1 (161-253)||(51058359-51058450)
chr1 (161-276)||(28457556-28457673)
chr1 (235-284)||(8241438-8241487)
chr1 (278-338)||(13450142-13450202)
chr1 (210-282)||(8579341-8579413)
chr1 (23-75)||(31313020-31313072)
chr1 (23-74)||(27754786-27754837)
chr1 (159-193)||(20314058-20314092)
chr1 (23-77)||(31313107-31313161)
chr1 (229-282)||(12465698-12465751)
chr1 (159-220)||(52100017-52100078)
[»] scaffold0209 (1 HSPs)
scaffold0209 (159-296)||(12-149)
[»] scaffold0039 (1 HSPs)
scaffold0039 (159-250)||(40807-40898)
[»] scaffold0170 (1 HSPs)
scaffold0170 (159-285)||(7129-7255)
[»] scaffold0431 (1 HSPs)
scaffold0431 (159-284)||(139-264)
[»] scaffold0222 (1 HSPs)
scaffold0222 (159-284)||(20422-20547)
[»] scaffold0863 (1 HSPs)
scaffold0863 (158-261)||(335-438)
[»] scaffold0991 (1 HSPs)
scaffold0991 (159-252)||(345-438)
[»] scaffold0048 (2 HSPs)
scaffold0048 (159-231)||(7622-7694)
scaffold0048 (258-332)||(7547-7621)
[»] scaffold0015 (1 HSPs)
scaffold0015 (157-253)||(192526-192622)
[»] scaffold0044 (2 HSPs)
scaffold0044 (158-261)||(65501-65604)
scaffold0044 (158-261)||(81749-81852)
[»] scaffold0389 (1 HSPs)
scaffold0389 (158-261)||(415-518)
[»] scaffold0290 (1 HSPs)
scaffold0290 (208-285)||(15760-15837)
[»] scaffold1487 (1 HSPs)
scaffold1487 (166-205)||(762-801)
[»] scaffold0514 (1 HSPs)
scaffold0514 (158-220)||(10912-10974)
[»] scaffold0027 (2 HSPs)
scaffold0027 (227-338)||(65589-65701)
scaffold0027 (158-192)||(65710-65744)
[»] scaffold0990 (1 HSPs)
scaffold0990 (42-94)||(3075-3127)
[»] scaffold0315 (1 HSPs)
scaffold0315 (229-285)||(10595-10651)
[»] scaffold0484 (1 HSPs)
scaffold0484 (159-208)||(11457-11507)
[»] scaffold0455 (1 HSPs)
scaffold0455 (229-282)||(6056-6109)
[»] scaffold0047 (1 HSPs)
scaffold0047 (229-282)||(59736-59789)
[»] scaffold0007 (1 HSPs)
scaffold0007 (159-285)||(61288-61418)
[»] scaffold0323 (1 HSPs)
scaffold0323 (282-338)||(17613-17669)


Alignment Details
Target: chr6 (Bit Score: 143; Significance: 4e-75; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 15576530 - 15576688
Alignment:
Q  1 gcatttgtcacactcagtcatcatgtgattgtaccttactatgagattgaagcaattctaaatagacattcaaggtctatatcaccatacacaccgaagg 100  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | |||    
T  15576530 gcatttgtcacactcagccatcatgtgattgtaccttactatgagattgaagcaattcgaaatagacattcaaggtctatatcaccatacacactggagg 15576629  T
Q  101 cattttcaaggttatcacgtggttgaggttaaggtggggtatatttgagaaagtatgct 159  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15576630 cattttcaaggttatcacgtggttgaggttaaggtggggtatatttgagaaagtatgct 15576688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 161 - 338
Target Start/End: Original strand, 25991852 - 25992029
Alignment:
Q  161 tcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtagag 260  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  25991852 tcataccccaaatgttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagaagaaatttcggtagag 25991951  T
Q  261 aggatactttgaagtaactcattttttattcggagttgggctctgttccctcttcattttctttttatttcagtattt 338  Q
    ||| |||||||||||| |||||||||||||| |||| || | || ||| ||||| |||| || ||||||||| |||||    
T  25991952 aggttactttgaagtacctcattttttattcagagtcggaccctcttctctctttatttactctttatttcattattt 25992029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 158 - 338
Target Start/End: Original strand, 5994698 - 5994879
Alignment:
Q  158 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggta 257  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||| || |    
T  5994698 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcggaaattttcgtcgtttcagacaaaattttggca 5994797  T
Q  258 gagaggatactttgaagtaactcatttttt-attcggagttgggctctgttccctcttcattttctttttatttcagtattt 338  Q
     ||||| |||||||||||| |||||||||| |||| |||| |||| || |||||||||  |||||||||||||| |||||||    
T  5994798 aagaggttactttgaagtacctcattttttgattccgagtcgggccctcttccctctttgttttctttttattttagtattt 5994879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 159 - 338
Target Start/End: Original strand, 23925335 - 23925514
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtag 258  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||    
T  23925335 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcatttttgacgaaatttcggtag 23925434  T
Q  259 agaggatactttgaagtaactcatttttt-attcggagttgggctctgttccctcttcattttctttttatttcagtattt 338  Q
    ||| | |||||||||||| |||||||||| |||| ||||  ||| || |||||||||  |||| |||||||||| ||||||    
T  23925435 agatgttactttgaagtacctcattttttgattccgagtcaggccctcttccctctttgtttt-tttttatttcggtattt 23925514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 158 - 338
Target Start/End: Original strand, 33298084 - 33298263
Alignment:
Q  158 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggta 257  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |    
T  33298084 ctgtcataccccaacttttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcgaca 33298183  T
Q  258 gagaggatactttgaagtaactcattttttattcggagttgggctctgttccctcttcattttctttttatttcagtattt 338  Q
     ||| | |||||||||||| |||||||||||||| |||| || | || ||| ||||| ||||| |||||||||||||||||    
T  33298184 aaga-gttactttgaagtacctcattttttattccgagtaggacccttttctctctttattttatttttatttcagtattt 33298263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 159 - 296
Target Start/End: Original strand, 25550295 - 25550432
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtag 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||| || ||    
T  25550295 tgtcataccccaaattttgaccacttttctctattcttacccattttattcatatttttaaagtcgggaattttcgtcgtttcaaacgaaattttggcag 25550394  T
Q  259 agaggatactttgaagtaactcattttttattcggagt 296  Q
    ||||| |||||||||||| |||||||||||||| ||||    
T  25550395 agaggttactttgaagtacctcattttttattccgagt 25550432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 159 - 301
Target Start/End: Original strand, 13825703 - 13825845
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtag 258  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||  ||    
T  13825703 tgtcataccccaaattttgatcacttttctctattcttacccattttattcgtatttttaaagtcaggaattttcgtcgtttcagacgaaatttcgacag 13825802  T
Q  259 agaggatactttgaagtaactcattttttattcggagttgggc 301  Q
    ||||| |||||||||||| ||||||||| |||| |||| ||||    
T  13825803 agaggttactttgaagtacctcatttttgattccgagtcgggc 13825845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 159 - 296
Target Start/End: Original strand, 5004061 - 5004198
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtag 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || |     
T  5004061 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 5004160  T
Q  259 agaggatactttgaagtaactcattttttattcggagt 296  Q
     |||| |||||||||||| ||||||||| |||| ||||    
T  5004161 ggaggttactttgaagtacctcatttttgattccgagt 5004198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 159 - 296
Target Start/End: Complemental strand, 30824594 - 30824457
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtag 258  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| || |     
T  30824594 tgtcataccccaaattttgaccacttttctctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 30824495  T
Q  259 agaggatactttgaagtaactcattttttattcggagt 296  Q
    ||||| |||||||||||| ||||||||| |||| ||||    
T  30824494 agaggttactttgaagtacctcatttttgattccgagt 30824457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 159 - 296
Target Start/End: Complemental strand, 25506606 - 25506469
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtag 258  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| ||    
T  25506606 tgtcataccccaaattttgatcacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgttttagacgaaatttcggcag 25506507  T
Q  259 agaggatactttgaagtaactcattttttattcggagt 296  Q
    ||||| |||||| || || ||||||||| |||| ||||    
T  25506506 agaggttactttaaaatacctcatttttgattccgagt 25506469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 159 - 290
Target Start/End: Complemental strand, 35091741 - 35091610
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtag 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||| || |     
T  35091741 tgtcataccccaaattttgaccacttttctctattcttacccattttattcatatttttaaagtcggaaattttcgtcgtttcagacgaaattttggcaa 35091642  T
Q  259 agaggatactttgaagtaactcattttttatt 290  Q
     |||| |||||||||||| |||||||||||||    
T  35091641 ggaggttactttgaagtacctcattttttatt 35091610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 159 - 296
Target Start/End: Original strand, 11279837 - 11279974
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtag 258  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||||  ||||||||||||||||| || |     
T  11279837 tgtcataccccaaattttgaccactttcctctattcttacccattttattcgtatttttaaagttgagaattttcgccgtttcagacgaaattttggcaa 11279936  T
Q  259 agaggatactttgaagtaactcattttttattcggagt 296  Q
    ||||| |||||||||||| |||||||||||||| ||||    
T  11279937 agaggttactttgaagtacctcattttttattccgagt 11279974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 158 - 288
Target Start/End: Complemental strand, 15391677 - 15391547
Alignment:
Q  158 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggta 257  Q
    |||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||  |    
T  15391677 ctgtcatatcccaaattttgaccacttttctctatccttgcccattttattcgtatttttaaagccaggaattttcgtcgtttcagacgaaatttcgaca 15391578  T
Q  258 gagaggatactttgaagtaactcatttttta 288  Q
     ||||| |||||||||||| |||||||||||    
T  15391577 aagaggttactttgaagtacctcatttttta 15391547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 21 - 155
Target Start/End: Complemental strand, 15574599 - 15574462
Alignment:
Q  21 tcatgtgattgtaccttactatgagattgaagcaattctaaatagacattcaaggtctatatcaccatacacaccga---aggcattttcaaggttatca 117  Q
    ||||||||||||| ||| ||||||||||||||||||| || ||||||||||||||| |||||||  ||||||||  |   |||  ||||||||||||| |    
T  15574599 tcatgtgattgtatcttgctatgagattgaagcaattatacatagacattcaaggtttatatcattatacacacatatagaggacttttcaaggttataa 15574500  T
Q  118 cgtggttgaggttaaggtggggtatatttgagaaagta 155  Q
    ||||| ||||||||||||||| |||||||| |||||||    
T  15574499 cgtggctgaggttaaggtgggatatatttgggaaagta 15574462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 157 - 263
Target Start/End: Original strand, 13490191 - 13490297
Alignment:
Q  157 gctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggt 256  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| | ||||  ||||||||||| |  |||||||| |||| ||||     
T  13490191 gctgtcataccccaaattttgaccacttttctctatttttatccattttattcgtatctgtaaaaccgggaattttcgttatttcagacaaaatctcggc 13490290  T
Q  257 agagagg 263  Q
    |||||||    
T  13490291 agagagg 13490297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 5489184 - 5489132
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgt 211  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5489184 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgt 5489132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 11053701 - 11053764
Alignment:
Q  158 ctgtcataccccaaattttgaccacttttctctattcttacc-cattttattcgtatttttaaa 220  Q
    ||||||||||||||||||||||||||||| |||||| |||||  ||||||||||||||||||||    
T  11053701 ctgtcataccccaaattttgaccacttttttctatttttaccaaattttattcgtatttttaaa 11053764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 93
Target Start/End: Complemental strand, 16526994 - 16526916
Alignment:
Q  15 cagtcatcatgtgattgtaccttactatgagattgaagcaattctaaatagacattcaaggtctatatcaccatacaca 93  Q
    ||||| ||||||||||||||||| |||| | ||| ||||||||||||| ||||||||||||| ||||||| || |||||    
T  16526994 cagtcgtcatgtgattgtacctttctataacattaaagcaattctaaacagacattcaaggtatatatcatcacacaca 16526916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 218 - 286
Target Start/End: Complemental strand, 26526708 - 26526640
Alignment:
Q  218 aaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcattttt 286  Q
    |||||||||||||||| |||||||||||||||| |||| |||| || ||||||||| || |||||||||    
T  26526708 aaagtcgggaattttcgtcgtttcagacgaaatatcggcagagtggttactttgaattacctcattttt 26526640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 12972821 - 12972883
Alignment:
Q  1 gcatttgtcacactc-agtcatcatgtgattgtaccttactatgagattgaagcaattctaaa 62  Q
    ||||||| ||||||| | |||||||||||||||||||| ||||||||||||| ||||||||||    
T  12972821 gcatttgccacactccaatcatcatgtgattgtaccttgctatgagattgaatcaattctaaa 12972883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 159 - 220
Target Start/End: Original strand, 30114444 - 30114505
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacc-cattttattcgtatttttaaa 220  Q
    |||||||||||||||||||||||||||| |||||| |||||  ||||||||||||||||||||    
T  30114444 tgtcataccccaaattttgaccactttt-tctatttttaccaaattttattcgtatttttaaa 30114505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 265 - 338
Target Start/End: Complemental strand, 5489124 - 5489051
Alignment:
Q  265 tactttgaagtaactcattttttattcggagttgggctctgttccctcttcattttctttttatttcagtattt 338  Q
    ||||||||||||  |||||||| ||||  ||| || | |||||||||||| |||||||||||||||||||||||    
T  5489124 tactttgaagtacttcatttttgattccaagtcggaccctgttccctctttattttctttttatttcagtattt 5489051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 155
Target Start/End: Original strand, 17860886 - 17860940
Alignment:
Q  101 cattttcaaggttatcacgtggttgaggttaaggtggggtatatttgagaaagta 155  Q
    ||||||||||||||| |||||  ||||||||||||||| ||||||||| ||||||    
T  17860886 cattttcaaggttataacgtgactgaggttaaggtgggatatatttgaaaaagta 17860940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 282
Target Start/End: Original strand, 15140726 - 15140779
Alignment:
Q  229 ttttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcat 282  Q
    |||| ||| |||||||| ||||||||| || ||||||||||||||||| |||||    
T  15140726 ttttaatcatttcagacaaaatttcggcagggaggatactttgaagtacctcat 15140779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 282
Target Start/End: Complemental strand, 23985100 - 23985047
Alignment:
Q  229 ttttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcat 282  Q
    |||| ||| |||||||| ||||||||| || ||||||||||||||||| |||||    
T  23985100 ttttaatcatttcagacaaaatttcggcagggaggatactttgaagtacctcat 23985047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 282
Target Start/End: Complemental strand, 28127510 - 28127457
Alignment:
Q  229 ttttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcat 282  Q
    |||| ||| |||||||| ||||||||| || ||||||||||||||||| |||||    
T  28127510 ttttaatcatttcagacaaaatttcggcagggaggatactttgaagtacctcat 28127457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 129; Significance: 1e-66; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 158 - 338
Target Start/End: Original strand, 12996475 - 12996655
Alignment:
Q  158 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggta 257  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  12996475 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcggaaattttcgtcgtttcagacgaaatttcggta 12996574  T
Q  258 gagaggatactttgaagtaactcattttttattcggagttgggctctgttccctcttcattttctttttatttcagtattt 338  Q
    |||||| |||||||||||| |||||||||||||| ||||  | | || ||| |||||  ||||||||||||||||||||||    
T  12996575 gagaggttactttgaagtacctcattttttattccgagtcagtccctcttctctctttgttttctttttatttcagtattt 12996655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 157 - 338
Target Start/End: Original strand, 52295602 - 52295784
Alignment:
Q  157 gctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggt 256  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||     
T  52295602 gctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacaaaatttcggc 52295701  T
Q  257 agagaggatactttgaagtaactcatttttt-attcggagttgggctctgttccctcttcattttctttttatttcagtattt 338  Q
    ||||||  |||||||||||| |||||||||| |||| |||| |||| || ||| ||||| |||||||||||||||||||||||    
T  52295702 agagagattactttgaagtacctcattttttgattccgagtcgggccctcttctctctttattttctttttatttcagtattt 52295784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 159 - 338
Target Start/End: Complemental strand, 27343756 - 27343577
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtag 258  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||   ||    
T  27343756 tgtcataccccaaattttgaccacttttctctatttttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacag 27343657  T
Q  259 agaggatactttgaagtaactcattttttattcggagttgggctctgttccctcttcattttctttttatttcagtattt 338  Q
    ||||| |||||||||||| |||||||||||||| |||| || | || ||| ||||| |||||||||||||||||||||||    
T  27343656 agaggttactttgaagtacctcattttttattccgagtcggaccctcttctctctttattttctttttatttcagtattt 27343577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 158 - 296
Target Start/End: Complemental strand, 8094348 - 8094210
Alignment:
Q  158 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggta 257  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| || |    
T  8094348 ctgtcataccccaaattttgaccacttttctctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggca 8094249  T
Q  258 gagaggatactttgaagtaactcattttttattcggagt 296  Q
     ||||| |||||||||||| ||||||||| |||| ||||    
T  8094248 aagaggttactttgaagtacctcatttttgattccgagt 8094210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 159 - 296
Target Start/End: Complemental strand, 8103153 - 8103016
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtag 258  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| || |     
T  8103153 tgtcataccccaaattttgaccacttttctctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 8103054  T
Q  259 agaggatactttgaagtaactcattttttattcggagt 296  Q
    ||||| |||||||||||| ||||||||| |||| ||||    
T  8103053 agaggttactttgaagtacctcatttttgattccgagt 8103016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 159 - 296
Target Start/End: Complemental strand, 4523745 - 4523608
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtag 258  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |  |     
T  4523745 tgtcataccccaaattttgaccactttcctctattcttatccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttgacaa 4523646  T
Q  259 agaggatactttgaagtaactcattttttattcggagt 296  Q
    ||||| |||||||||||| |||||||||||||| ||||    
T  4523645 agaggttactttgaagtacctcattttttattccgagt 4523608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 159 - 338
Target Start/End: Complemental strand, 21532369 - 21532190
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtag 258  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||  |     
T  21532369 tgtcataccccaaattttgaccacttttctctatccttatccattttattcgtatttttaaagtcggaaattttcgtcgtttcagacgaaatttcgaca- 21532271  T
Q  259 agaggatactttgaagtaactcattttttattcggagttgggctctgttccctcttcatttt-ctttttatttcagtattt 338  Q
    | ||  |||||||||||| |||||||||||||| |||| || | || ||| ||||| |||||  |||||||||| ||||||    
T  21532270 aaagattactttgaagtacctcattttttattctgagtcggacccttttctctctttattttattttttatttcggtattt 21532190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 159 - 284
Target Start/End: Complemental strand, 12428543 - 12428418
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtag 258  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| | | ||||||| |  |||||||||||||||||        
T  12428543 tgtcataccccaaattttgaccacttttctctatttctacccattttattcgtatttttaaagccagaaattttcgttatttcagacgaaatttcgacga 12428444  T
Q  259 agaggatactttgaagtaactcattt 284  Q
    ||||  |||||||||||| |||||||    
T  12428443 agagtttactttgaagtacctcattt 12428418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 159 - 232
Target Start/End: Original strand, 10638328 - 10638400
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaatttt 232  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  10638328 tgtcataccccaaattttgaccacttttctctatttttacccattttattcgta-ttttaaagtcgggaatttt 10638400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 158 - 253
Target Start/End: Original strand, 33188765 - 33188859
Alignment:
Q  158 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttc 253  Q
    |||||||||||||||||||||| |||||| |||||| ||| || ||||||| ||||||||||||  | |||||||| |||||||||||||||||||    
T  33188765 ctgtcataccccaaattttgacaactttt-tctatttttatcctttttatttgtatttttaaagctgagaattttcgtcgtttcagacgaaatttc 33188859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 284
Target Start/End: Original strand, 3424331 - 3424454
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtag 258  Q
    |||||||||||||||||||| || ||||||||| | |||||| |||||||| || ||| |||| |  |||  ||| ||||| |||||||||||||||       
T  3424331 tgtcataccccaaattttgatcatttttctctaattttaccccttttattcttactttaaaagccaagaaagttcgtcgttccagacgaaatttcgg--c 3424428  T
Q  259 agaggatactttgaagtaactcattt 284  Q
    ||||| |||||||||||| |||||||    
T  3424429 agaggttactttgaagtacctcattt 3424454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 257 - 338
Target Start/End: Original strand, 10638404 - 10638485
Alignment:
Q  257 agagaggatactttgaagtaactcattttttattcggagttgggctctgttccctcttcattttctttttatttcagtattt 338  Q
    ||||||| |||||||||||| |||||||||||||| |||| || | || | | ||||| |||||||||||||||||||||||    
T  10638404 agagaggttactttgaagtacctcattttttattccgagtcggaccctctcctctctttattttctttttatttcagtattt 10638485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 15787861 - 15787927
Alignment:
Q  21 tcatgtgattgtaccttactatgagattgaagcaattctaaatagacattcaaggtctatatcacca 87  Q
    |||| |||||||||||| ||||||||||||| ||||| |||||||||||| || |||||||| ||||    
T  15787861 tcatttgattgtaccttgctatgagattgaatcaattttaaatagacatttaaagtctatattacca 15787927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 263
Target Start/End: Original strand, 12402907 - 12402956
Alignment:
Q  214 ttttaaagtcgggaattttcatcgtttcagacgaaatttcggtagagagg 263  Q
    |||||||||| ||||||||| ||||||||||||||||||||| |||||||    
T  12402907 ttttaaagtcaggaattttcgtcgtttcagacgaaatttcggcagagagg 12402956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 282
Target Start/End: Original strand, 19772241 - 19772313
Alignment:
Q  210 gtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcat 282  Q
    ||||||| ||||||| |  |||| ||| |||||||| ||||||||| || ||||||||||||||||| |||||    
T  19772241 gtattttaaaagtcgcgttttttaatcatttcagacaaaatttcggcagggaggatactttgaagtacctcat 19772313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 282
Target Start/End: Complemental strand, 19647405 - 19647352
Alignment:
Q  229 ttttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcat 282  Q
    |||| ||| |||||||| ||||||||| || ||||||||||||||||| |||||    
T  19647405 ttttaatcatttcagacaaaatttcggcagggaggatactttgaagtacctcat 19647352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 338
Target Start/End: Original strand, 10814333 - 10814393
Alignment:
Q  278 ctcattttttattcggagttgggctctgttccctcttcattttctttttatttcagtattt 338  Q
    |||||||||||||| ||||  | | || ||||||||| ||||||||||||||| |||||||    
T  10814333 ctcattttttattccgagtcagaccctcttccctctttattttctttttattttagtattt 10814393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 128; Significance: 4e-66; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 159 - 338
Target Start/End: Complemental strand, 35421 - 35242
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtag 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |     
T  35421 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcgacaa 35322  T
Q  259 agaggatactttgaagtaactcattttttattcggagttgggctctgttccctcttcattttctttttatttcagtattt 338  Q
    ||||| |||||||||||| |||||||||||||| |||| |||| || ||| || || |||||||||||||||||||||||    
T  35321 agaggttactttgaagtacctcattttttattccgagtcgggccctcttcgctttttattttctttttatttcagtattt 35242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 126; Significance: 6e-65; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 158 - 338
Target Start/End: Original strand, 23463 - 23644
Alignment:
Q  158 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttt-taaagtcgggaattttcatcgtttcagacgaaatttcggt 256  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||    
T  23463 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtattttttaaagtcgggaattttcatcatttctgacgaaatttcggt 23562  T
Q  257 agagaggatactttgaagtaactcattttttattcggagttgggctctgttccctcttcattttctttttatttcagtattt 338  Q
    ||||||| |||||||||||| ||||||||| |||| |||| |||| || |||||||||  |||||||||||||| |||||||    
T  23563 agagaggttactttgaagtacctcatttttgattccgagtcgggccctcttccctctttgttttctttttatttaagtattt 23644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 121; Significance: 6e-62; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 158 - 338
Target Start/End: Original strand, 10439936 - 10440116
Alignment:
Q  158 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggta 257  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |    
T  10439936 ctgtcataccccaaattttgaccacttttctctattcttgcccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcggca 10440035  T
Q  258 gagaggatactttgaagtaactcattttttattcggagttgggctctgttccctcttcattttctttttatttcagtattt 338  Q
    |||||| |||||| ||||| |||||||||||||| ||||  | | || ||  ||||| |||||||||||||||||||||||    
T  10440036 gagaggttactttaaagtacctcattttttattccgagtcagaccctcttttctctttattttctttttatttcagtattt 10440116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 159 - 290
Target Start/End: Complemental strand, 18304457 - 18304326
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtag 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || |     
T  18304457 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 18304358  T
Q  259 agaggatactttgaagtaactcattttttatt 290  Q
    ||||| |||||||||||| |||||||||||||    
T  18304357 agaggttactttgaagtacctcattttttatt 18304326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 159 - 296
Target Start/End: Original strand, 12978455 - 12978592
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtag 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || |     
T  12978455 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 12978554  T
Q  259 agaggatactttgaagtaactcattttttattcggagt 296  Q
     |||| |||||||||||| ||||||||| |||| ||||    
T  12978555 ggaggttactttgaagtacctcatttttgattccgagt 12978592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 158 - 296
Target Start/End: Complemental strand, 4952463 - 4952325
Alignment:
Q  158 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggta 257  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| || |    
T  4952463 ctgtcatacctcaaattttgaccacttttatctattcttacccattttattcgtatttttaaagtcggaaattttcgtcgtttcagacgaaattttggca 4952364  T
Q  258 gagaggatactttgaagtaactcattttttattcggagt 296  Q
     ||||| |||||||||||| |||||||||||||| ||||    
T  4952363 aagaggttactttgaagtacctcattttttattccgagt 4952325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 158 - 296
Target Start/End: Original strand, 13831499 - 13831637
Alignment:
Q  158 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggta 257  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |  |    
T  13831499 ctgtcataccctaaattttgaccactttcctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttgaca 13831598  T
Q  258 gagaggatactttgaagtaactcattttttattcggagt 296  Q
     ||||| |||||||||||| |||||||||||||| ||||    
T  13831599 aagaggttactttgaagtacctcattttttattccgagt 13831637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 158 - 296
Target Start/End: Original strand, 13839530 - 13839668
Alignment:
Q  158 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggta 257  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |  |    
T  13839530 ctgtcataccccaaattttgaccactttcctctattcttatccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttgaca 13839629  T
Q  258 gagaggatactttgaagtaactcattttttattcggagt 296  Q
     ||||| |||||||||||| |||||||||||||| ||||    
T  13839630 aagaggttactttgaagtacctcattttttattccgagt 13839668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 159 - 255
Target Start/End: Original strand, 30244775 - 30244871
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcgg 255  Q
    ||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||| | ||||||| || ||||||||    
T  30244775 tgtcatacctcaaattttgaccacttttctctatttttatccattttattcgtatttttaaagtcaggaattttcgttgtttcagtcgtaatttcgg 30244871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 4941643 - 4941581
Alignment:
Q  158 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaa 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4941643 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaa 4941581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 15 - 155
Target Start/End: Complemental strand, 21471459 - 21471316
Alignment:
Q  15 cagtcatcatgtgattgtaccttactatgagattgaagcaattctaaatagacattcaaggtctatatcaccatacacac---cgaaggcattttcaagg 111  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||| || ||||||   | ||||  |||||||||    
T  21471459 cagtcgtcatgtgattgtaccttgctatgagattgaagcaattctaaatagacattcaatgtatatatcatcacacacacatacaaaggacttttcaagg 21471360  T
Q  112 ttatcacgtggttgaggttaaggtggggtatatttgagaaagta 155  Q
    |||| |||||  | |||||||| | || |||||||  |||||||    
T  21471359 ttataacgtgactaaggttaagttaggatatattttggaaagta 21471316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 158 - 284
Target Start/End: Complemental strand, 21663089 - 21662962
Alignment:
Q  158 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtat-ttttaaagtcgggaattttcatcgtttcagacgaaatttcggt 256  Q
    ||||||||||||||||||||| ||||||| ||| || ||||||||||||||||||| |||||||| || || | ||| |||||| ||||||||||||       
T  21663089 ctgtcataccccaaattttgatcacttttatctgtttttacccattttattcgtattttttaaagccgagagtcttcgtcgttttagacgaaatttcaac 21662990  T
Q  257 agagaggatactttgaagtaactcattt 284  Q
    || |||| |||||||||||| |||||||    
T  21662989 agggaggttactttgaagtacctcattt 21662962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 263
Target Start/End: Original strand, 30245568 - 30245672
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtag 258  Q
    |||||||||| || ||||||||||||||||||||| ||| ||||||||||||||||||| | ||| | ||||||| | ||||||| || |||||||| ||    
T  30245568 tgtcatacccaaatttttgaccacttttctctatttttatccattttattcgtatttttcatgtcagaaattttcgttgtttcagtcgtaatttcggaag 30245667  T
Q  259 agagg 263  Q
    |||||    
T  30245668 agagg 30245672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 167 - 263
Target Start/End: Original strand, 30255420 - 30255516
Alignment:
Q  167 cccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtagagagg 263  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||||||| | ||| | ||||||| | ||||||| || |||||||| |||||||    
T  30255420 cccaaattttgaccacttttctctatttttatccattttattcgtatttttcatgtcagaaattttcgttgtttcagtcgtaatttcggcagagagg 30255516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 155
Target Start/End: Complemental strand, 5722077 - 5721920
Alignment:
Q  3 atttgtcacactc-agtcatcatgtgattgtaccttactatgagattgaagcaattctaaatagacattcaaggtctatatcaccatacacaccga---a 98  Q
    ||||||||||||| |||  |||| |||||||| ||| ||||||||||||||||||||||||||| |||||||||   |||| |||| ||||||  |   |    
T  5722077 atttgtcacactccagtagtcatttgattgtatcttgctatgagattgaagcaattctaaataggcattcaaggcacatattaccagacacacatataga 5721978  T
Q  99 ggcattttcaaggttatcacgtggttgaggtt-aaggtggggtatatttgagaaagta 155  Q
    ||  ||||||||||||| |||||| | ||||| |||||||| ||||||| ||||||||    
T  5721977 ggttttttcaaggttataacgtggcttaggttaaaggtgggatatattttagaaagta 5721920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 230 - 285
Target Start/End: Complemental strand, 1955746 - 1955691
Alignment:
Q  230 tttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcatttt 285  Q
    |||| ||||||||||| ||||||||| ||||||| |||||||||| | ||||||||    
T  1955746 tttcgtcgtttcagacaaaatttcggcagagaggttactttgaagcacctcatttt 1955691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 15 - 74
Target Start/End: Complemental strand, 7955855 - 7955796
Alignment:
Q  15 cagtcatcatgtgattgtaccttactatgagattgaagcaattctaaatagacattcaag 74  Q
    |||||||||||||||||||||||  ||||||| | ||||||||| ||| ||||| |||||    
T  7955855 cagtcatcatgtgattgtaccttgttatgagactaaagcaattccaaacagacactcaag 7955796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 70
Target Start/End: Complemental strand, 1074125 - 1074076
Alignment:
Q  21 tcatgtgattgtaccttactatgagattgaagcaattctaaatagacatt 70  Q
    |||||||||||||||||  ||||||||||||||||||  ||| |||||||    
T  1074125 tcatgtgattgtaccttgttatgagattgaagcaatttcaaacagacatt 1074076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 282
Target Start/End: Complemental strand, 20114119 - 20114066
Alignment:
Q  229 ttttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcat 282  Q
    |||| ||| |||||||| ||||||||| || ||||||||||||||||| |||||    
T  20114119 ttttaatcatttcagacaaaatttcggcagggaggatactttgaagtacctcat 20114066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 282
Target Start/End: Original strand, 38247996 - 38248049
Alignment:
Q  229 ttttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcat 282  Q
    |||| ||| |||||||| ||||||||| || ||||||||||||||||| |||||    
T  38247996 ttttaatcatttcagacaaaatttcggcagggaggatactttgaagtacctcat 38248049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 75
Target Start/End: Complemental strand, 16166754 - 16166702
Alignment:
Q  23 atgtgattgtaccttactatgagattgaagcaattctaaatagacattcaagg 75  Q
    ||||||||||||| || ||| | |||||| |||||||||| ||||||||||||    
T  16166754 atgtgattgtaccatattataaaattgaaacaattctaaacagacattcaagg 16166702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 119; Significance: 9e-61; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 159 - 301
Target Start/End: Original strand, 17973565 - 17973707
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtag 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||    
T  17973565 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcggcag 17973664  T
Q  259 agaggatactttgaagtaactcattttttattcggagttgggc 301  Q
    ||||| |||||||||||| |||||||||||||| |||| ||||    
T  17973665 agaggttactttgaagtacctcattttttattccgagtcgggc 17973707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 158 - 296
Target Start/End: Complemental strand, 39837628 - 39837490
Alignment:
Q  158 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggta 257  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |  |    
T  39837628 ctgtcataccccaaattttgaccactttcctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttgaca 39837529  T
Q  258 gagaggatactttgaagtaactcattttttattcggagt 296  Q
     ||||| |||||||||||| |||||||||||||| ||||    
T  39837528 aagaggttactttgaagtacctcattttttattccgagt 39837490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 159 - 296
Target Start/End: Complemental strand, 25579877 - 25579740
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtag 258  Q
    |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || |     
T  25579877 tgtcataccctaaattttgaccacttttatctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 25579778  T
Q  259 agaggatactttgaagtaactcattttttattcggagt 296  Q
    ||||| |||||||||||| |||||||||||||| ||||    
T  25579777 agaggttactttgaagtacctcattttttattccgagt 25579740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 159 - 296
Target Start/End: Original strand, 30938282 - 30938419
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtag 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || |     
T  30938282 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 30938381  T
Q  259 agaggatactttgaagtaactcattttttattcggagt 296  Q
     |||| |||||||||||| ||||||||| |||| ||||    
T  30938382 ggaggttactttgaagtacctcatttttgattccgagt 30938419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 158 - 337
Target Start/End: Complemental strand, 26873670 - 26873490
Alignment:
Q  158 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggta 257  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||| ||||||||||||||||||||  |    
T  26873670 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttgtaatgtcggaaattttcgtcgtttcagacgaaatttcgaca 26873571  T
Q  258 gagaggatactttgaagtaactcatttttt-attcggagttgggctctgttccctcttcattttctttttatttcagtatt 337  Q
     ||||| |||||| ||||| || ||||||| |||| |||| ||||  | ||| ||||| ||||||||||||||||||||||    
T  26873570 aagaggttactttaaagtaccttattttttgattccgagtagggccgtcttctctctttattttctttttatttcagtatt 26873490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 159 - 337
Target Start/End: Complemental strand, 26876119 - 26875940
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtag 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||  ||||||||||||||||||||  |     
T  26876119 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaatgtcggaaatttttgtcgtttcagacgaaatttcgacaa 26876020  T
Q  259 agaggatactttgaagtaactcatttttt-attcggagttgggctctgttccctcttcattttctttttatttcagtatt 337  Q
    ||||| |||||| || || |||||||||| |||| |||| ||||  | ||| ||||| ||||||||||||||||||||||    
T  26876019 agaggttactttaaaatacctcattttttgattccgagtagggccatcttctctctttattttctttttatttcagtatt 26875940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 159 - 288
Target Start/End: Complemental strand, 39845670 - 39845541
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtag 258  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |  |     
T  39845670 tgtcataccccaaattttgaccactttcctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttgacaa 39845571  T
Q  259 agaggatactttgaagtaactcatttttta 288  Q
    ||||| |||||||||||| |||||||||||    
T  39845570 agaggttactttgaagtacctcatttttta 39845541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 158 - 296
Target Start/End: Complemental strand, 17664706 - 17664568
Alignment:
Q  158 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggta 257  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |  |    
T  17664706 ctgtcataccccaaattttgaccacttttctctatccttgcccattttattcgtatttttagagtcgggaattttcatcgtttcagacgaaattttgaca 17664607  T
Q  258 gagaggatactttgaagtaactcattttttattcggagt 296  Q
     ||| | |||||||||||| |||||||||||||| ||||    
T  17664606 aagaagttactttgaagtacctcattttttattccgagt 17664568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 159 - 296
Target Start/End: Complemental strand, 1407138 - 1407001
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtag 258  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||||  ||||||||||||||||| || |     
T  1407138 tgtcataccccaaattttgaccactttcctctattcttacccattttattcgtatttttaaagttgtgaattttcgccgtttcagacgaaattttggcaa 1407039  T
Q  259 agaggatactttgaagtaactcattttttattcggagt 296  Q
    ||||| |||||||||||| |||||||||||||| ||||    
T  1407038 agaggttactttgaagtacctcattttttattccgagt 1407001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 159 - 291
Target Start/End: Complemental strand, 4839847 - 4839715
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtag 258  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |     
T  4839847 tgtcataccccaaattttgaccgcttttctctattcttacctattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcgacaa 4839748  T
Q  259 agaggatactttgaagtaactcattttttattc 291  Q
    ||| | |||||||||||| ||||||||| ||||    
T  4839747 agaagttactttgaagtacctcatttttgattc 4839715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 159 - 296
Target Start/End: Complemental strand, 17683861 - 17683724
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtag 258  Q
    |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |  |     
T  17683861 tgtcataccccaaattttgaccacttttctctatccttgcccattttattcgtatttttagagtcgggaattttcgtcgtttcagacgaaattttgacaa 17683762  T
Q  259 agaggatactttgaagtaactcattttttattcggagt 296  Q
    ||| | |||||||||||| |||||||||||||| ||||    
T  17683761 agaagttactttgaagtacctcattttttattccgagt 17683724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 16052715 - 16052873
Alignment:
Q  1 gcatttgtcacact-cagtcatcatgtgattgtaccttactatgagattgaagcaattctaaatagacattcaaggtctatatcaccatacacaccga-- 97  Q
    ||||||| |||||| || || ||||||||||||||||| |||||||||||||||||||| ||| |||||||||||   ||||||| || |||||   |      
T  16052715 gcatttgccacacttcaatcgtcatgtgattgtaccttgctatgagattgaagcaattcgaaacagacattcaagaaatatatcatcacacacataaata 16052814  T
Q  98 -aggcattttcaaggttatcacgtggttgaggttaaggtggggtatatttgagaaagta 155  Q
     |||| ||||||||||||| |||||  ||||| ||||||| | |||| || ||||||||    
T  16052815 gaggccttttcaaggttataacgtgactgaggataaggtgagatatagtttagaaagta 16052873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 261
Target Start/End: Original strand, 4582203 - 4582306
Alignment:
Q  158 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggta 257  Q
    ||||||||||  |||||||||||||||||||||||| |||| |||||| ||| || |||||||  ||| ||| | | || ||| |||||||||||||| |    
T  4582203 ctgtcataccttaaattttgaccacttttctctatttttacacattttgttcatacttttaaaaccggaaatgtccgtcattttagacgaaatttcggca 4582302  T
Q  258 gaga 261  Q
    ||||    
T  4582303 gaga 4582306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 6670710 - 6670772
Alignment:
Q  158 ctgtcataccccaaattttgaccacttttctctattcttacc-cattttattcgtatttttaaa 220  Q
    ||||||||||||||||||||||||||||| |||||| |||||  ||||||||||||||||||||    
T  6670710 ctgtcataccccaaattttgaccactttt-tctatttttaccaaattttattcgtatttttaaa 6670772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 84
Target Start/End: Original strand, 22894996 - 22895054
Alignment:
Q  26 tgattgtaccttactatgagattgaagcaattctaaatagacattcaaggtctatatca 84  Q
    |||||||||||| ||||||||||||||| |||||||| ||||||||| ||| |||||||    
T  22894996 tgattgtacctttctatgagattgaagccattctaaacagacattcagggtatatatca 22895054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 28901797 - 28901869
Alignment:
Q  21 tcatgtgattgtaccttactatgagattgaagcaattctaaatagacattcaaggtctatatcaccatacacac 94  Q
    ||||||||||||| ||| ||| ||||||||||| ||||||||||||| || ||||| ||||||| || ||||||    
T  28901797 tcatgtgattgtatcttgctacgagattgaagc-attctaaatagacttttaaggtatatatcatcacacacac 28901869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 216
Target Start/End: Original strand, 6663042 - 6663099
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacc-cattttattcgtatttt 216  Q
    |||||||||||||||||| ||||||||| |||||| |||||  ||||||||||||||||    
T  6663042 tgtcataccccaaattttaaccactttt-tctatttttaccaaattttattcgtatttt 6663099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 216
Target Start/End: Original strand, 6743444 - 6743501
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacc-cattttattcgtatttt 216  Q
    |||||||||||||||||| ||||||||| |||||| |||||  ||||||||||||||||    
T  6743444 tgtcataccccaaattttaaccactttt-tctatttttaccaaattttattcgtatttt 6743501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 285
Target Start/End: Original strand, 23090611 - 23090667
Alignment:
Q  229 ttttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcatttt 285  Q
    |||| ||| ||| ||||||||||| |  |||||||||||||||||||| ||||||||    
T  23090611 ttttaatcattttagacgaaatttggacagagaggatactttgaagtacctcatttt 23090667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 285
Target Start/End: Original strand, 25700273 - 25700329
Alignment:
Q  229 ttttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcatttt 285  Q
    |||| ||| ||||| |||||||||||| || |||| |||||||||||| ||||||||    
T  25700273 ttttaatcatttcaaacgaaatttcggaagggaggttactttgaagtacctcatttt 25700329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 119; Significance: 9e-61; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 159 - 338
Target Start/End: Original strand, 50824352 - 50824535
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtag 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||    
T  50824352 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcggaaattttcgtcgtttcagacgaaatttcggcag 50824451  T
Q  259 agaggatactttgaagtaactcattttttattcggagttgggctctgttccc----tcttcattttctttttatttcagtattt 338  Q
    ||||| |||||||||||| |||||||||||||| |||| || | || ||| |    |||| |||||||||||||||||||||||    
T  50824452 agaggttactttgaagtacctcattttttattccgagtcggaccctcttctctctttctttattttctttttatttcagtattt 50824535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 159 - 338
Target Start/End: Complemental strand, 50851508 - 50851325
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtag 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||    
T  50851508 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcggaaattttcgtcgtttcagacgaaatttcggcag 50851409  T
Q  259 agaggatactttgaagtaactcattttttattcggagttgggctctgttccc----tcttcattttctttttatttcagtattt 338  Q
    ||||| |||||||||||| |||||||||||||| |||| || | || ||| |    |||| |||||||||||||||||||||||    
T  50851408 agaggttactttgaagtacctcattttttattccgagtcggaccctcttctctctttctttattttctttttatttcagtattt 50851325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 158 - 334
Target Start/End: Complemental strand, 14538671 - 14538494
Alignment:
Q  158 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcgg-t 256  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||      
T  14538671 ctgtcataccccaaattttgaccacttttctctattcttatccattttattcatatttttaaagtcgggaattttcgtcgtttcagacgaaatttcggca 14538572  T
Q  257 agagaggatactttgaagtaactcattttttattcggagttgggctctgttccctcttcattttctttttatttcagt 334  Q
    | ||||| |||||||||||| |||||||||||||| |||| |||| || ||| ||||| |||||||||||||||||||    
T  14538571 aaagaggttactttgaagtacctcattttttattccgagtcgggccctcttctctctttattttctttttatttcagt 14538494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 158 - 338
Target Start/End: Complemental strand, 27341401 - 27341220
Alignment:
Q  158 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggta 257  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |    
T  27341401 ctgtcataccccaaattttgaccacttttctctattcttatccattttattcatatttttaaagtcgggaattttcgtcgtttcagacgaaatttcggca 27341302  T
Q  258 gagaggatactttgaagtaactca-ttttttattcggagttgggctctgttccctcttcattttctttttatttcagtattt 338  Q
    || ||| |||||||||||| |||| |||||||||| ||||  ||| || ||||||||| ||||||||| |||||||||||||    
T  27341301 gaaaggttactttgaagtacctcatttttttattccgagtcaggccctcttccctctttattttctttctatttcagtattt 27341220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 159 - 338
Target Start/End: Original strand, 2211239 - 2211418
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtag 258  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| |||||| |||||||||||||| |     
T  2211239 tgtcataccctaaattttgaccacttttctctattcttacctattttattcgtatttttaaagtcaggaattttcgtcgtttaagacgaaatttcggcaa 2211338  T
Q  259 agaggatactttgaagtaactcattttttattcggagttgggctctgttccctcttcattttctttttatttcagtattt 338  Q
    ||||| || ||| || || |||||||||||||| ||||  ||| || ||| ||||| |||||||||||||||||||||||    
T  2211339 agagggtattttaaaatacctcattttttattccgagtcaggccctcttctctctttattttctttttatttcagtattt 2211418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 158 - 296
Target Start/End: Complemental strand, 8154710 - 8154572
Alignment:
Q  158 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggta 257  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |  |    
T  8154710 ctgtcataccccaaattttgaccactttcctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttgaca 8154611  T
Q  258 gagaggatactttgaagtaactcattttttattcggagt 296  Q
     ||||| |||||||||||| |||||||||||||| ||||    
T  8154610 aagaggttactttgaagtacctcattttttattccgagt 8154572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 158 - 296
Target Start/End: Original strand, 41006555 - 41006693
Alignment:
Q  158 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggta 257  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || |    
T  41006555 ctgtcataccccaaattttgaccatttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggca 41006654  T
Q  258 gagaggatactttgaagtaactcattttttattcggagt 296  Q
      |||| |||||||||||| ||||||||| |||| ||||    
T  41006655 aggaggttactttgaagtacctcatttttgattccgagt 41006693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 158 - 296
Target Start/End: Original strand, 41015335 - 41015473
Alignment:
Q  158 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggta 257  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || |    
T  41015335 ctgtcataccccaaattttgaccatttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggca 41015434  T
Q  258 gagaggatactttgaagtaactcattttttattcggagt 296  Q
      |||| |||||||||||| ||||||||| |||| ||||    
T  41015435 aggaggttactttgaagtacctcatttttgattccgagt 41015473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 158 - 301
Target Start/End: Complemental strand, 9525500 - 9525357
Alignment:
Q  158 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggta 257  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||||| |    
T  9525500 ctgtcataccccaaattttgatcacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgttgttttagacgaaatttcggca 9525401  T
Q  258 gagaggatactttgaagtaactcattttttattcggagttgggc 301  Q
    || ||| |||||| || || |||||||||||||| |||| ||||    
T  9525400 gaaaggttactttaaaatacctcattttttattccgagtcgggc 9525357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 159 - 301
Target Start/End: Complemental strand, 9555173 - 9555031
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtag 258  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||| |||||||||||||| ||    
T  9555173 tgtcataccccaaattttgatcacttttctctattcttacccattttactcgtatttttaaagtcgggaattttcgttgttttagacgaaatttcggcag 9555074  T
Q  259 agaggatactttgaagtaactcattttttattcggagttgggc 301  Q
    | ||| |||||| || || |||||||||||||| |||| ||||    
T  9555073 aaaggttactttaaaatacctcattttttattccgagtcgggc 9555031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 159 - 338
Target Start/End: Complemental strand, 28470282 - 28470103
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtag 258  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| | ||||||| ||||||||||||||||||||  |     
T  28470282 tgtcataccccaaattttgaccacttttctctatccttatccattttattcgtatttttaaagtcagaaattttcgtcgtttcagacgaaatttcgaca- 28470184  T
Q  259 agaggatactttgaagtaactcattttttattcggagttgggctctgttccctcttcatttt-ctttttatttcagtattt 338  Q
    | ||  |||| ||||||| |||||||||||||| |||| || | || ||| ||||| |||||  |||||||||| ||||||    
T  28470183 aaagattactatgaagtacctcattttttattctgagtcggacccttttctctctttattttattttttatttcggtattt 28470103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 158 - 284
Target Start/End: Original strand, 17933654 - 17933780
Alignment:
Q  158 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggta 257  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||| |  ||||||||||||||||        
T  17933654 ctgtcataccccaaattttgaccaattttctctatttttacccattttattcgtatttttaaagtcggaaattttcgttatttcagacgaaatttcttcg 17933753  T
Q  258 gagaggatactttgaagtaactcattt 284  Q
    |||||| |||||||||||| |||||||    
T  17933754 gagaggttactttgaagtacctcattt 17933780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 161 - 285
Target Start/End: Complemental strand, 43470615 - 43470492
Alignment:
Q  161 tcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtagag 260  Q
    ||||||||||||||||||| |||||| |||||| |||||| |||||||||||||||||||| || |||||||  ||||||||||||||||||||| ||||    
T  43470615 tcataccccaaattttgactactttt-tctatttttaccctttttattcgtatttttaaagccgagaattttattcgtttcagacgaaatttcggcagag 43470517  T
Q  261 aggatactttgaagtaactcatttt 285  Q
    ||| |||||||||||| ||||||||    
T  43470516 aggttactttgaagtacctcatttt 43470492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 158 - 284
Target Start/End: Original strand, 17919198 - 17919324
Alignment:
Q  158 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggta 257  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||  ||||||| |  |||||||||||||||||       
T  17919198 ctgtcataccccaaattttgaccacttttctctatttttatccattttattcgtatttttaaagccgaaaattttcgttatttcagacgaaatttcgtcg 17919297  T
Q  258 gagaggatactttgaagtaactcattt 284  Q
    |||||| |||||| ||||| |||||||    
T  17919298 gagaggttactttaaagtacctcattt 17919324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 159 - 223
Target Start/End: Original strand, 17628265 - 17628329
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtc 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17628265 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtc 17628329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 158 - 284
Target Start/End: Complemental strand, 16816269 - 16816145
Alignment:
Q  158 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggta 257  Q
    ||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||| ||| ||||||| |  ||||||||||||||| |       
T  16816269 ctgtcataccc-aaattttgaccacttttctctatttttactcattttattcgtatttttaaagccggaaattttcgttatttcagacgaaattttgacg 16816171  T
Q  258 gagaggatactttgaagtaactcattt 284  Q
    |||||| |||||||||||| |||||||    
T  16816170 gagagg-tactttgaagtacctcattt 16816145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 159 - 285
Target Start/End: Original strand, 21186747 - 21186872
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtag 258  Q
    |||||||||||||||||||||||||||| ||| || ||| |||||||||||||| |||||||| || |||||||| | |||||| |||||||||||| ||    
T  21186747 tgtcataccccaaattttgaccacttttatctgtttttatccattttattcgtacttttaaagccgagaattttcgttgtttcaaacgaaatttcggcag 21186846  T
Q  259 agaggatactttgaagtaactcatttt 285  Q
     |||| || |||||| || ||||||||    
T  21186847 ggagg-tattttgaaatacctcatttt 21186872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 163 - 261
Target Start/End: Original strand, 18349560 - 18349658
Alignment:
Q  163 ataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtagaga 261  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||||||||| ||||||| |||| ||| | | |||||| |||||||||||||| |||||    
T  18349560 ataccccaaattttgacaacttttctctatttttacacattttattcgtacttttaaaatcggaaatgtccgtcgttttagacgaaatttcggcagaga 18349658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 158 - 261
Target Start/End: Complemental strand, 8197762 - 8197659
Alignment:
Q  158 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggta 257  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||| |||||| |||||||  ||| ||| | | |||||| |||| ||||||||| |    
T  8197762 ctgtcataccccaaattttgaccacttttctctatttttacacattttgttcgtacttttaaaaccggaaatgtccgtcgttttagacaaaatttcggca 8197663  T
Q  258 gaga 261  Q
    ||||    
T  8197662 gaga 8197659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 159 - 255
Target Start/End: Complemental strand, 30541 - 30445
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcgg 255  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||| || ||| |||||||  ||| ||| | | |||||| ||||||||||||||    
T  30541 tgtcataccccaaattttgaccacttttctctatttttacacattttgtttgtacttttaaaaccggaaatgtccgtcgttttagacgaaatttcgg 30445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 11520817 - 11520659
Alignment:
Q  1 gcatttgtcacactc-agtcatcatgtgattgtaccttactatgagattgaagcaattctaaatagacattcaaggtctatatcaccatacacaccga-- 97  Q
    ||||||| ||||||| |||| |||| |||||||||||| ||||||||||||||||||| |||  ||||||||||||| |||||||  | |||||   |      
T  11520817 gcatttgccacactctagtcgtcatatgattgtaccttgctatgagattgaagcaattataagcagacattcaaggtatatatcataacacacagacata 11520718  T
Q  98 -aggcattttcaaggttatcacgtggttgaggttaaggtggggtatatttgagaaagta 155  Q
     |||  ||||||||||||| |||||| |||||| |||||||| |||||||  |||||||    
T  11520717 gaggacttttcaaggttataacgtggatgaggtaaaggtgggatatatttaggaaagta 11520659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 159 - 253
Target Start/End: Original strand, 18039011 - 18039105
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttc 253  Q
    |||||||||||||||||||||||||||||||  || |||||||||||||||||||||| || | || |||   || | |||||||||||||||||    
T  18039011 tgtcataccccaaattttgaccacttttctcgctttttacccattttattcgtattttaaacgccgagaaggatcgttgtttcagacgaaatttc 18039105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 229 - 282
Target Start/End: Original strand, 13272670 - 13272723
Alignment:
Q  229 ttttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcat 282  Q
    |||| ||| |||||||| ||||||||| |||||||||||||||||||| |||||    
T  13272670 ttttaatcatttcagacaaaatttcggcagagaggatactttgaagtacctcat 13272723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 282
Target Start/End: Complemental strand, 4506032 - 4505979
Alignment:
Q  229 ttttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcat 282  Q
    |||| ||| |||||||| ||||||||| || ||||||||||||||||| |||||    
T  4506032 ttttaatcatttcagacaaaatttcggcagggaggatactttgaagtacctcat 4505979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 285
Target Start/End: Original strand, 16288692 - 16288733
Alignment:
Q  244 acgaaatttcggtagagaggatactttgaagtaactcatttt 285  Q
    |||||||||||| ||||||| |||||||||||| ||||||||    
T  16288692 acgaaatttcggcagagaggttactttgaagtacctcatttt 16288733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 282
Target Start/End: Original strand, 17657630 - 17657683
Alignment:
Q  229 ttttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcat 282  Q
    |||| ||| |||||||| ||||||||| || ||||||||||||||||| |||||    
T  17657630 ttttaatcatttcagacaaaatttcggcagggaggatactttgaagtacctcat 17657683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 282
Target Start/End: Original strand, 27976552 - 27976605
Alignment:
Q  229 ttttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcat 282  Q
    |||| ||| |||||||| ||||||||| || ||||||||||||||||| |||||    
T  27976552 ttttaatcatttcagacaaaatttcggcagggaggatactttgaagtacctcat 27976605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 1477758 - 1477814
Alignment:
Q  228 attttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcattt 284  Q
    ||||| ||| |||||||| ||||||||| || |||| |||||||||||| |||||||    
T  1477758 atttttatcatttcagacaaaatttcggcagggaggttactttgaagtacctcattt 1477814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 5632928 - 5633000
Alignment:
Q  3 atttgtcacact-cagtcatcatgtgattgtaccttactatgagattgaagcaattctaaatagacattcaag 74  Q
    |||||||||||| ||||| | |||| ||| |||||| | || ||||||||||||||||||| | |||||||||    
T  5632928 atttgtcacactgcagtcgtaatgtaattataccttgcaattagattgaagcaattctaaacatacattcaag 5633000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 158 - 186
Target Start/End: Complemental strand, 6959006 - 6958978
Alignment:
Q  158 ctgtcataccccaaattttgaccactttt 186  Q
    |||||||||||||||||||||||||||||    
T  6959006 ctgtcataccccaaattttgaccactttt 6958978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 17618174 - 17618130
Alignment:
Q  238 tttcagacgaaatttcggtagagaggatactttgaagtaactcat 282  Q
    |||||||| ||||||||| || ||||||||||||||||| |||||    
T  17618174 tttcagacaaaatttcggcagggaggatactttgaagtacctcat 17618130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 118; Significance: 4e-60; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 159 - 296
Target Start/End: Original strand, 121228 - 121365
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtag 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  121228 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcggtag 121327  T
Q  259 agaggatactttgaagtaactcattttttattcggagt 296  Q
    ||||| ||||||||||||| |||||||| |||| ||||    
T  121328 agaggttactttgaagtaaatcatttttgattccgagt 121365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0497 (Bit Score: 116; Significance: 6e-59; HSPs: 1)
Name: scaffold0497
Description:

Target: scaffold0497; HSP #1
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 159 - 338
Target Start/End: Original strand, 10993 - 11171
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtag 258  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||||||| ||    
T  10993 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtattgttaaagtcggaaattttcgtcgtttcagacgaaatttcggcag 11092  T
Q  259 agaggatactttgaagtaactcattttttattcggagttgggctctgttccctcttcattttctttttatttcagtattt 338  Q
    ||||| |||||||||||| |||| |||| |||| || | |||| || ||| ||||| |||||||||||||||||||||||    
T  11093 agaggttactttgaagtacctca-ttttgattccgaatcgggccctcttctctctttattttctttttatttcagtattt 11171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 116; Significance: 6e-59; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 159 - 338
Target Start/End: Complemental strand, 29186343 - 29186164
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtag 258  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |     
T  29186343 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcgacaa 29186244  T
Q  259 agaggatactttgaagtaactcattttttattcggagttgggctctgttccctcttcattttctttttatttcagtattt 338  Q
    ||||| |||||||||||  |||||||||||||| |||| || | || ||| ||||| ||||| |||||||||||||||||    
T  29186243 agaggttactttgaagtgcctcattttttattccgagtcggacccttttctctctttattttatttttatttcagtattt 29186164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 158 - 338
Target Start/End: Complemental strand, 20372979 - 20372799
Alignment:
Q  158 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggta 257  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |    
T  20372979 ctgtcataccccaaattttgaccacttttctctattcttaccgattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcgaca 20372880  T
Q  258 gagaggatactttgaagtaactcattttttattcggagttgggctctgttccctcttcattttctttttatttcagtattt 338  Q
    |||||| |||||||||||| |||||||||||||| |||| |  | || ||| ||| | ||||||| ||||||||| |||||    
T  20372879 gagaggttactttgaagtacctcattttttattccgagtcgaaccctcttctctcattattttctctttatttcattattt 20372799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 159 - 338
Target Start/End: Complemental strand, 20398700 - 20398521
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtag 258  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||    
T  20398700 tgtcataccccaaattttgaccacttttctctattcttaccgattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcgacag 20398601  T
Q  259 agaggatactttgaagtaactcattttttattcggagttgggctctgttccctcttcattttctttttatttcagtattt 338  Q
    ||||| |||||||||||| |||||||||||||| |||| |  | || ||| ||| | ||||||| ||||||||| |||||    
T  20398600 agaggttactttgaagtacctcattttttattccgagtcgaaccctcttctctcattattttctctttatttcattattt 20398521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 158 - 332
Target Start/End: Complemental strand, 23350142 - 23349968
Alignment:
Q  158 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggta 257  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| || || |||||||||||||||||| |    
T  23350142 ctgtcataccccaaattttgaccatttttctctatttttacccattttattcgtatttttaaagtcgggaattctcgtcatttcagacgaaatttcggca 23350043  T
Q  258 gagaggatactttgaagtaactcattttttattcggagttgggctctgttccctcttcattttctttttatttca 332  Q
     ||||| |||||||||||| |||||||||||||| |||| |||| || ||| ||||| ||||||| |||||||||    
T  23350042 aagaggttactttgaagtacctcattttttattccgagtcgggccctcttctctctttattttctctttatttca 23349968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 158 - 296
Target Start/End: Complemental strand, 24956912 - 24956774
Alignment:
Q  158 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggta 257  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || |    
T  24956912 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggca 24956813  T
Q  258 gagaggatactttgaagtaactcattttttattcggagt 296  Q
      |||| |||||||||||| ||||||||| |||| ||||    
T  24956812 aggaggttactttgaagtacctcatttttgattccgagt 24956774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 158 - 296
Target Start/End: Complemental strand, 24965375 - 24965237
Alignment:
Q  158 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggta 257  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || |    
T  24965375 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggca 24965276  T
Q  258 gagaggatactttgaagtaactcattttttattcggagt 296  Q
      |||| |||||||||||| ||||||||| |||| ||||    
T  24965275 aggaggttactttgaagtacctcatttttgattccgagt 24965237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 159 - 296
Target Start/End: Complemental strand, 43598111 - 43597974
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtag 258  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| || |     
T  43598111 tgtcataccccaaattttgaccactttcctctattcttacccattttattcgtatttttaaagtcgggaattttcgccgtttcagacgaaattttggcaa 43598012  T
Q  259 agaggatactttgaagtaactcattttttattcggagt 296  Q
    ||||| |||||||||||| |||||||||||||| ||||    
T  43598011 agaggttactttgaagtacctcattttttattccgagt 43597974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 159 - 296
Target Start/End: Complemental strand, 43603603 - 43603466
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtag 258  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| || |     
T  43603603 tgtcataccccaaattttgaccactttcctctattcttacccattttattcgtatttttaaagtcgggaattttcgccgtttcagacgaaattttggcaa 43603504  T
Q  259 agaggatactttgaagtaactcattttttattcggagt 296  Q
    ||||| |||||||||||| |||||||||||||| ||||    
T  43603503 agaggttactttgaagtacctcattttttattccgagt 43603466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 159 - 296
Target Start/End: Complemental strand, 43609095 - 43608958
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtag 258  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| || |     
T  43609095 tgtcataccccaaattttgaccactttcctctattcttacccattttattcgtatttttaaagtcgggaattttcgccgtttcagacgaaattttggcaa 43608996  T
Q  259 agaggatactttgaagtaactcattttttattcggagt 296  Q
    ||||| |||||||||||| |||||||||||||| ||||    
T  43608995 agaggttactttgaagtacctcattttttattccgagt 43608958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 156 - 296
Target Start/End: Complemental strand, 1728227 - 1728087
Alignment:
Q  156 tgctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcgg 255  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |     
T  1728227 tgctgtcataccccaaattttgaccactttcctctattcttacccattttattcgtatttttaaagtcgggaattttcgccgtttcagacgaaattttga 1728128  T
Q  256 tagagaggatactttgaagtaactcattttttattcggagt 296  Q
     | ||||| |||||||||||| |||||||||||||| ||||    
T  1728127 caaagaggttactttgaagtacctcattttttattccgagt 1728087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 159 - 338
Target Start/End: Original strand, 31410890 - 31411069
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtag 258  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||  ||||||||| |||||| | |||||||||||  |     
T  31410890 tgtcataccccaaattttgaccacatttctctattctaacccattttattcgtatttttaaagttaggaattttcgtcgtttaaaacgaaatttcgacaa 31410989  T
Q  259 agaggatactttgaagtaactcattttttattcggagttgggctctgttccctcttcattttctttttatttcagtattt 338  Q
    ||||| |||||||||||| ||||||||||||||  ||| |||| || ||| ||||| || ||||||||||||||||||||    
T  31410990 agaggttactttgaagtacctcattttttattctcagtcgggccctcttctctctttatcttctttttatttcagtattt 31411069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 158 - 296
Target Start/End: Original strand, 28852549 - 28852687
Alignment:
Q  158 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggta 257  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||||  ||||||||||||||||| || |    
T  28852549 ctgtcataccccaaattttgaccactttcctctattcttacccattttattcgtatttttaaagttgagaattttcgccgtttcagacgaaattttggca 28852648  T
Q  258 gagaggatactttgaagtaactcattttttattcggagt 296  Q
     ||||| |||||||||||| |||||||||||||| ||||    
T  28852649 aagaggttactttgaagtacctcattttttattccgagt 28852687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 159 - 296
Target Start/End: Original strand, 28843940 - 28844077
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtag 258  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||||  ||||||||||||||||| || |     
T  28843940 tgtcataccccaaattttgaccactttcctctattcttacccattttattcgtatttttaaagttgagaattttcgccgtttcagacgaaattttggcaa 28844039  T
Q  259 agaggatactttgaagtaactcattttttattcggagt 296  Q
    ||||| |||||||||||| |||||||||||||| ||||    
T  28844040 agaggttactttgaagtacctcattttttattccgagt 28844077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 159 - 286
Target Start/End: Original strand, 31421789 - 31421916
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtag 258  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||| ||||||||  |     
T  31421789 tgtcatacccaaaattttgaccacttttctctattcttacccattttattcgtatttttgaagtcggaaattttcgtcgtttcagacaaaatttcgacaa 31421888  T
Q  259 agaggatactttgaagtaactcattttt 286  Q
    ||| | |||||||||||| |||||||||    
T  31421889 agatgttactttgaagtacctcattttt 31421916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 159 - 270
Target Start/End: Original strand, 19223555 - 19223666
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtag 258  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||| || |||||||||| ||||| |||  ||    
T  19223555 tgtcataccccaaattttgaccacttttctctattcttatccattttatttgtatttttaaagtcgagaattgtcgtcgtttcagatgaaatctcgacag 19223654  T
Q  259 agaggatacttt 270  Q
    ||||| ||||||    
T  19223655 agaggttacttt 19223666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 17027213 - 17027056
Alignment:
Q  1 gcatttgtcacactc-agtcatcatgtgattgtaccttactatgagattgaagcaattctaaatagacattcaaggtctatatcaccatacacac--cga 97  Q
    |||||||||| |||| |||| |||||||||||| |||| |||||| ||| |||||||| |||| ||||| ||||||| | ||||| || ||||||    |    
T  17027213 gcatttgtcatactccagtcgtcatgtgattgttccttcctatgacatttaagcaattataaacagacactcaaggtatttatcatcacacacacatata 17027114  T
Q  98 aggcattttcaaggttatcacgtggttgaggttaaggtggggtatatttgagaaagta 155  Q
    |||| |||| |||||||| || || |||||||||||||||| || |||||||||||||    
T  17027113 aggccttttaaaggttataacatgattgaggttaaggtgggatacatttgagaaagta 17027056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 24841439 - 24841367
Alignment:
Q  3 atttgtcacactc-agtcatcatgtgattgtaccttactatgagattgaagcaattctaaatagacattcaag 74  Q
    ||||||||||||  |||||||||||||||| |||||||||||||||||||||||||||||| | |||||||||    
T  24841439 atttgtcacactttagtcatcatgtgattggaccttactatgagattgaagcaattctaaacaaacattcaag 24841367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 22754633 - 22754483
Alignment:
Q  1 gcatttgtcacactc-agtcatcatgtgattgtaccttactatgagattgaagcaattctaaatagacattcaaggtctatatca----ccatacacacc 95  Q
    ||||||| ||||||| |||| ||||||||||||||||| |||| ||||||||| ||||||||| || |||||||||| || ||||     || ||| ||     
T  22754633 gcatttgccacactccagtcgtcatgtgattgtaccttgctataagattgaagaaattctaaacaggcattcaaggtatacatcatttcacacacataca 22754534  T
Q  96 gaaggcattttcaaggttatcacgtggttgaggttaaggtggggtatatttg 147  Q
    || | || |||||||||||| |||||| ||||||||||||||| || |||||    
T  22754533 gaggaca-tttcaaggttataacgtggctgaggttaaggtgggataaatttg 22754483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 162 - 255
Target Start/End: Complemental strand, 41099838 - 41099745
Alignment:
Q  162 cataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcgg 255  Q
    ||||||||||||||||||||||||| |||||| |||| |||||  |||||| |||||||  ||| ||| | | |||||| ||||||||||||||    
T  41099838 cataccccaaattttgaccacttttatctatttttacacatttcgttcgtacttttaaaaccggaaatgtccgtcgttttagacgaaatttcgg 41099745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 11274790 - 11274871
Alignment:
Q  4 tttgtcacactc-agtcatcatgtgattgtaccttactatgagattgaagcaattctaaatagacattcaaggtctatatca 84  Q
    |||||||||||| |||  |||||||||| ||||||||||||| |||||||| |||| ||| | ||||||||||| |||||||    
T  11274790 tttgtcacactctagttgtcatgtgattttaccttactatgaaattgaagcgattccaaacaaacattcaaggtatatatca 11274871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 19331247 - 19331160
Alignment:
Q  1 gcatttgtcacactc-agtcatcatgtgattgtaccttactatgagattgaagcaattctaaatagacattcaaggtctatatcacca 87  Q
    ||||||||||||||| || | |||||||||| |||||| || |||||||||||||||| || | ||||||||||| |  |||||||||    
T  19331247 gcatttgtcacactccagccgtcatgtgattctaccttgctttgagattgaagcaattatatagagacattcaagatacatatcacca 19331160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 284
Target Start/End: Complemental strand, 23028053 - 23028007
Alignment:
Q  238 tttcagacgaaatttcggtagagaggatactttgaagtaactcattt 284  Q
    |||||||||||||||||| ||||||| |||||||||||| |||||||    
T  23028053 tttcagacgaaatttcggcagagaggttactttgaagtacctcattt 23028007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 283
Target Start/End: Original strand, 23037923 - 23037969
Alignment:
Q  237 gtttcagacgaaatttcggtagagaggatactttgaagtaactcatt 283  Q
    ||||||||||||||||||| ||||||| |||||||||||| ||||||    
T  23037923 gtttcagacgaaatttcggcagagaggttactttgaagtacctcatt 23037969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 208
Target Start/End: Original strand, 21929236 - 21929285
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttatt 208  Q
    ||||||||||||||||||||| | |||||||  || ||||||||||||||    
T  21929236 tgtcataccccaaattttgacaatttttctcgctttttacccattttatt 21929285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 282
Target Start/End: Complemental strand, 21988673 - 21988620
Alignment:
Q  229 ttttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcat 282  Q
    |||| ||| |||||||| ||||||||| || ||||||||||||||||| |||||    
T  21988673 ttttaatcatttcagacaaaatttcggcagggaggatactttgaagtacctcat 21988620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 282
Target Start/End: Complemental strand, 21997317 - 21997264
Alignment:
Q  229 ttttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcat 282  Q
    |||| ||| |||||||| ||||||||| || ||||||||||||||||| |||||    
T  21997317 ttttaatcatttcagacaaaatttcggcagggaggatactttgaagtacctcat 21997264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 282
Target Start/End: Complemental strand, 23606421 - 23606368
Alignment:
Q  229 ttttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcat 282  Q
    |||| ||| |||||||| ||||||||| || ||||||||||||||||| |||||    
T  23606421 ttttaatcatttcagacaaaatttcggcagggaggatactttgaagtacctcat 23606368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 282
Target Start/End: Original strand, 23635076 - 23635129
Alignment:
Q  229 ttttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcat 282  Q
    |||| ||| |||||||| ||||||||| || ||||||||||||||||| |||||    
T  23635076 ttttaatcatttcagacaaaatttcggcagggaggatactttgaagtacctcat 23635129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 282
Target Start/End: Complemental strand, 23829075 - 23829022
Alignment:
Q  229 ttttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcat 282  Q
    |||| ||| |||||||| ||||||||| || ||||||||||||||||| |||||    
T  23829075 ttttaatcatttcagacaaaatttcggcagggaggatactttgaagtacctcat 23829022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 282
Target Start/End: Complemental strand, 23837816 - 23837763
Alignment:
Q  229 ttttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcat 282  Q
    |||| ||| |||||||| ||||||||| || ||||||||||||||||| |||||    
T  23837816 ttttaatcatttcagacaaaatttcggcagggaggatactttgaagtacctcat 23837763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 282
Target Start/End: Complemental strand, 31550511 - 31550458
Alignment:
Q  229 ttttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcat 282  Q
    |||| ||| |||||||| ||||||||| ||||| |||||||||||||| |||||    
T  31550511 ttttaatcatttcagacaaaatttcggcagagatgatactttgaagtacctcat 31550458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 285
Target Start/End: Complemental strand, 21852635 - 21852579
Alignment:
Q  229 ttttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcatttt 285  Q
    |||| ||| ||||| |||||||||||| || |||| |||||||||||| ||||||||    
T  21852635 ttttaatcatttcaaacgaaatttcggcagggaggttactttgaagtacctcatttt 21852579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 285
Target Start/End: Complemental strand, 21869159 - 21869103
Alignment:
Q  229 ttttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcatttt 285  Q
    |||| ||| ||||| |||||||||||| || |||| |||||||||||| ||||||||    
T  21869159 ttttaatcatttcaaacgaaatttcggcagggaggttactttgaagtacctcatttt 21869103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 159 - 338
Target Start/End: Original strand, 4390 - 4570
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtag 258  Q
    |||||||||||||||||||||   ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||  ||    
T  4390 tgtcataccccaaattttgacattttttctctattcttacccattttattcatatttttaaagtcggtaattttcatcgtttcagacgaaatttcgacag 4489  T
Q  259 agaggatactttgaagtaactca-ttttttattcggagttgggctctgttccctcttcattttctttttatttcagtattt 338  Q
    ||||| |||||||||||| |||| |||||||||| |||| |||| || ||| ||||| |||||||||||||||||||||||    
T  4490 agaggttactttgaagtacctcatttttttattccgagtcgggccctcttctctctttattttctttttatttcagtattt 4570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 159 - 332
Target Start/End: Original strand, 33035 - 33208
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtag 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |     
T  33035 tgtcataccccaaattttgaccacttttctctattcttacccattttatacgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcggcaa 33134  T
Q  259 agaggatactttgaagtaactcattttttattcggagttgggctctgttccctcttcattttctttttatttca 332  Q
    ||||| |||||| ||||| |||||||||||||| |||| || | || |||  |||| ||||||| |||||||||    
T  33135 agaggttactttaaagtacctcattttttattccgagtcggaccctcttctttctttattttctctttatttca 33208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 109; Significance: 8e-55; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 158 - 338
Target Start/End: Complemental strand, 995 - 815
Alignment:
Q  158 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggta 257  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||||||||||||||||| |    
T  995 ctgtcataccccaaattttgaccagctttctctattcttacccattttattcgtatttttaaagctgggaattttcgtcgtttcagacgaaatttcggca 896  T
Q  258 gagaggatactttgaagtaactcattttttattcggagttgggctctgttccctcttcattttctttttatttcagtattt 338  Q
    || ||| ||||||||| || ||||||||| |||| |||| |||| || ||| ||||| ||||||||||||||| |||||||    
T  895 gaaaggttactttgaaatacctcatttttgattccgagtcgggccctcttctctctttattttctttttattttagtattt 815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 108; Significance: 3e-54; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 187 - 338
Target Start/End: Original strand, 35037884 - 35038035
Alignment:
Q  187 ctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcattttt 286  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||| || |||||||||    
T  35037884 ctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcgatagagaggttactttgaaatacctcattttt 35037983  T
Q  287 tattcggagttgggctctgttccctcttcattttctttttatttcagtattt 338  Q
    ||||| ||||  ||| || ||||||||| |||||||||||||||||||||||    
T  35037984 tattccgagtcaggccctcttccctctttattttctttttatttcagtattt 35038035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 158 - 296
Target Start/End: Complemental strand, 15944623 - 15944485
Alignment:
Q  158 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggta 257  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || |    
T  15944623 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggca 15944524  T
Q  258 gagaggatactttgaagtaactcattttttattcggagt 296  Q
      |||| |||||||||||| ||||||||| |||| ||||    
T  15944523 aggaggttactttgaagtacctcatttttgattccgagt 15944485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 158 - 296
Target Start/End: Original strand, 35138592 - 35138730
Alignment:
Q  158 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggta 257  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || |    
T  35138592 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggca 35138691  T
Q  258 gagaggatactttgaagtaactcattttttattcggagt 296  Q
      |||| |||||||||||| ||||||||| |||| ||||    
T  35138692 aggaggttactttgaagtacctcatttttgattccgagt 35138730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 158 - 296
Target Start/End: Original strand, 35146928 - 35147066
Alignment:
Q  158 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggta 257  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || |    
T  35146928 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggca 35147027  T
Q  258 gagaggatactttgaagtaactcattttttattcggagt 296  Q
      |||| |||||||||||| ||||||||| |||| ||||    
T  35147028 aggaggttactttgaagtacctcatttttgattccgagt 35147066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 158 - 296
Target Start/End: Complemental strand, 41233910 - 41233772
Alignment:
Q  158 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggta 257  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || |    
T  41233910 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggca 41233811  T
Q  258 gagaggatactttgaagtaactcattttttattcggagt 296  Q
      |||| |||||||||||| ||||||||| |||| ||||    
T  41233810 aggaggttactttgaagtacctcatttttgattccgagt 41233772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 159 - 296
Target Start/End: Original strand, 14582925 - 14583062
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtag 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || |     
T  14582925 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 14583024  T
Q  259 agaggatactttgaagtaactcattttttattcggagt 296  Q
     |||| |||||||||||| ||||||||| |||| ||||    
T  14583025 ggaggttactttgaagtacctcatttttgattccgagt 14583062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 159 - 296
Target Start/End: Complemental strand, 15953137 - 15953000
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtag 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || |     
T  15953137 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 15953038  T
Q  259 agaggatactttgaagtaactcattttttattcggagt 296  Q
     |||| |||||||||||| ||||||||| |||| ||||    
T  15953037 ggaggttactttgaagtacctcatttttgattccgagt 15953000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 159 - 296
Target Start/End: Complemental strand, 38168422 - 38168285
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtag 258  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || |     
T  38168422 tgtcatactccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 38168323  T
Q  259 agaggatactttgaagtaactcattttttattcggagt 296  Q
     |||| |||||||||||| ||||||||| |||| ||||    
T  38168322 ggaggttactttgaagtacctcatttttgattccgagt 38168285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 158 - 296
Target Start/End: Original strand, 20621517 - 20621655
Alignment:
Q  158 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggta 257  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||| ||||||||  |    
T  20621517 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtgtttttgaagtcgggaattttcgtcgtttcagacaaaatttcgaca 20621616  T
Q  258 gagaggatactttgaagtaactcattttttattcggagt 296  Q
     ||| | |||||||||||| |||||||||||||| ||||    
T  20621617 aagatgttactttgaagtacctcattttttattctgagt 20621655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 158 - 296
Target Start/End: Complemental strand, 42565995 - 42565857
Alignment:
Q  158 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggta 257  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||||  ||||||||||||||||| || |    
T  42565995 ctgtcataccccaaattttgaccactttcctctattcttacccattttattcgtatttttaaagttgagaattttcgccgtttcagacgaaattttggca 42565896  T
Q  258 gagaggatactttgaagtaactcattttttattcggagt 296  Q
     ||||| |||||||||||| |||||||||||||| ||||    
T  42565895 aagaggttactttgaagtacctcattttttattccgagt 42565857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 159 - 296
Target Start/End: Complemental strand, 42574618 - 42574481
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtag 258  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||||  ||||||||||||||||| || |     
T  42574618 tgtcataccccaaattttgaccactttcctctattcttacccattttattcgtatttttaaagttgagaattttcgccgtttcagacgaaattttggcaa 42574519  T
Q  259 agaggatactttgaagtaactcattttttattcggagt 296  Q
    ||||| |||||||||||| |||||||||||||| ||||    
T  42574518 agaggttactttgaagtacctcattttttattccgagt 42574481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 159 - 261
Target Start/End: Complemental strand, 17687463 - 17687361
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtag 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||    
T  17687463 tgtcataccccaaattttgaccacttttctctattcttacccattttattcatatttttaaagtcgggaattttcgtcgtttcagacgaaatttcggcag 17687364  T
Q  259 aga 261  Q
    |||    
T  17687363 aga 17687361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 159 - 287
Target Start/End: Complemental strand, 20372378 - 20372251
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtag 258  Q
    |||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||  |     
T  20372378 tgtcataccccaaattttgaccacttttctctatccttgcccattttattcgtatttttaaagtcggaaattttcgtcgtttcagacgaaatttcgaca- 20372280  T
Q  259 agaggatactttgaagtaactcatttttt 287  Q
    | ||| |||||||||||| ||||||||||    
T  20372279 aaaggttactttgaagtacctcatttttt 20372251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 159 - 270
Target Start/End: Original strand, 25483601 - 25483712
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtag 258  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||||| |||||||||||||||| |||  ||    
T  25483601 tgtcataccccaaattttgaccacttttctctattcttatccattttatttgtatttttaaagtcgagaattttcgtcgtttcagacgaaatctcgacag 25483700  T
Q  259 agaggatacttt 270  Q
    ||||| ||||||    
T  25483701 agaggttacttt 25483712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 159 - 270
Target Start/End: Original strand, 25491207 - 25491318
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtag 258  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||||| |||||||||||||||| |||  ||    
T  25491207 tgtcataccccaaattttgaccacttttctctattcttatccattttatttgtatttttaaagtcgagaattttcgtcgtttcagacgaaatctcgacag 25491306  T
Q  259 agaggatacttt 270  Q
    ||||| ||||||    
T  25491307 agaggttacttt 25491318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 159 - 254
Target Start/End: Original strand, 44372705 - 44372800
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcg 254  Q
    |||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  44372705 tgtcataccccaaattttgaccacttttttctatctttacccattttattcgtatttttaaagtcgggaattttcgtcgtttaagacgaaatttcg 44372800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 159 - 254
Target Start/End: Original strand, 44388616 - 44388711
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcg 254  Q
    |||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  44388616 tgtcataccccaaattttgaccacttttttctatctttacccattttattcgtatttttaaagtcgggaattttcgtcgtttaagacgaaatttcg 44388711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 159 - 284
Target Start/End: Original strand, 35303737 - 35303862
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtag 258  Q
    ||||||||||||||||||||| | ||||||||  | |||||| |||||||| |||||| |||| |  ||| |||| ||||||||||||||||||||| ||    
T  35303737 tgtcataccccaaattttgactatttttctctgattttaccccttttattcttattttaaaagccaagaaatttcgtcgtttcagacgaaatttcggcag 35303836  T
Q  259 agaggatactttgaagtaactcattt 284  Q
    ||||| || ||||||||| |||||||    
T  35303837 agaggttaatttgaagtacctcattt 35303862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 159 - 263
Target Start/End: Complemental strand, 27606709 - 27606606
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtag 258  Q
    |||||||| |||||||||||| ||||||||||||| ||| | |||||||||||| |||||||| ||||||||||  |||| |||||||||||||||| ||    
T  27606709 tgtcatactccaaattttgactacttttctctatttttatcaattttattcgtacttttaaagacgggaatttt-gtcgtctcagacgaaatttcggcag 27606611  T
Q  259 agagg 263  Q
    |||||    
T  27606610 agagg 27606606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 159 - 261
Target Start/End: Original strand, 24285696 - 24285798
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtag 258  Q
    |||||||||||||||||||||||||||||| |||| |||| |||||| |||||| |||||||   || ||||| | |||||| |||||||||||||||||    
T  24285696 tgtcataccccaaattttgaccacttttctttatttttacacattttgttcgtacttttaaaactggaaatttccgtcgtttaagacgaaatttcggtag 24285795  T
Q  259 aga 261  Q
    |||    
T  24285796 aga 24285798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 159 - 261
Target Start/End: Complemental strand, 42249520 - 42249418
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtag 258  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||  |||||| ||||||| |||  ||| | | |||||| |||||||||||||| ||    
T  42249520 tgtcataccccaaattttgaccacttttctctatttttacacatttcgttcgtacttttaaaatcgaaaatgtccgtcgttttagacgaaatttcggcag 42249421  T
Q  259 aga 261  Q
    |||    
T  42249420 aga 42249418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 161 - 261
Target Start/End: Complemental strand, 26903396 - 26903296
Alignment:
Q  161 tcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtagag 260  Q
    |||||||| |||||||||||||||||||||||| |||| |||||| |||||| |||||||  ||  ||| | |||||||| |||||||||||||| ||||    
T  26903396 tcataccctaaattttgaccacttttctctatttttacacattttgttcgtacttttaaaaccgaaaatgtccatcgttttagacgaaatttcggcagag 26903297  T
Q  261 a 261  Q
    |    
T  26903296 a 26903296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 159 - 261
Target Start/End: Complemental strand, 34070669 - 34070567
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtag 258  Q
    |||||||||||||||||||| |||||||||||||| |||| |||||| |||||| |||||||  ||| ||| | | |||||| |||| ||||||||| ||    
T  34070669 tgtcataccccaaattttgatcacttttctctatttttacacattttgttcgtacttttaaaaccggtaatgtccgtcgttttagacaaaatttcggcag 34070570  T
Q  259 aga 261  Q
    |||    
T  34070569 aga 34070567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 158 - 261
Target Start/End: Original strand, 24292371 - 24292475
Alignment:
Q  158 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcg-ggaattttcatcgtttcagacgaaatttcggt 256  Q
    ||||||||||||||||||||||||||||||| |||| |||| |||||| |||||| |||||||  ||   ||| | | |||||| |||||||||||||||    
T  24292371 ctgtcataccccaaattttgaccacttttctttatttttacacattttgttcgtacttttaaaaccgaaaaatgtccgtcgtttaagacgaaatttcggt 24292470  T
Q  257 agaga 261  Q
    |||||    
T  24292471 agaga 24292475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 285
Target Start/End: Complemental strand, 18989389 - 18989312
Alignment:
Q  208 tcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcatttt 285  Q
    |||| ||||||||| ||||||||||  |||  |||||||||||| ||||||||||| |||||| ||||| ||||||||    
T  18989389 tcgtctttttaaagccgggaatttttgtcgcatcagacgaaattacggtagagaggttactttcaagtacctcatttt 18989312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 220
Target Start/End: Complemental strand, 21322875 - 21322814
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacc-cattttattcgtatttttaaa 220  Q
    |||||||||||||||||||||||||||| ||||||  ||||  ||||||||||||||||||||    
T  21322875 tgtcataccccaaattttgaccactttt-tctatttgtaccaaattttattcgtatttttaaa 21322814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 76
Target Start/End: Original strand, 22389192 - 22389265
Alignment:
Q  3 atttgtcacactcagtcatcatgtgattgtaccttactatgagattgaagcaattctaaatagacattcaaggt 76  Q
    ||||| ||||| ||||| |||||||| |||||||| |||||| ||||||| |||| |||| | |||||||||||    
T  22389192 atttgccacacccagtcgtcatgtgactgtaccttgctatgaaattgaagtaattataaacaaacattcaaggt 22389265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 39730166 - 39730111
Alignment:
Q  3 atttgtcacactca-gtcatcatgtgattgtaccttactatgagattgaagcaatt 57  Q
    ||||| |||||||| |||||| ||||||||||| ||||||||||||||| ||||||    
T  39730166 atttgccacactcaagtcatcgtgtgattgtacattactatgagattgatgcaatt 39730111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 209
Target Start/End: Original strand, 20917520 - 20917570
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattc 209  Q
    |||||||| | |||||||||||||||||||||||| |||  ||||||||||    
T  20917520 tgtcatactctaaattttgaccacttttctctatttttattcattttattc 20917570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 282
Target Start/End: Complemental strand, 27683434 - 27683381
Alignment:
Q  229 ttttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcat 282  Q
    |||| ||| |||||||| ||||||||| || ||||||||||||||||| |||||    
T  27683434 ttttaatcatttcagacaaaatttcggcagggaggatactttgaagtacctcat 27683381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 159 - 287
Target Start/End: Original strand, 15813 - 15941
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtag 258  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||    
T  15813 tgtcataccccaaattttgaccacttttctctatttttacccattttattcgtatttttaaagtcggaaattttcgtcgtttcagacgaaatttcggcag 15912  T
Q  259 agaggatactttgaagtaactcatttttt 287  Q
    ||||| |||||||||||| ||||||||||    
T  15913 agaggttactttgaagtacctcatttttt 15941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 104; Significance: 8e-52; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 159 - 338
Target Start/End: Complemental strand, 32137819 - 32137640
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtag 258  Q
    |||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||   |     
T  32137819 tgtcttaccccaaattttgatcacttttctctattcttatccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaa 32137720  T
Q  259 agaggatactttgaagtaactcattttttattcggagttgggctctgttccctcttcattttctttttatttcagtattt 338  Q
    | | | |||||||||||| |||||||||||||| |||| |||| || ||| ||||| ||||||| |||||||||||||||    
T  32137719 ataagttactttgaagtacctcattttttattccgagtcgggccctcttctctctttattttctctttatttcagtattt 32137640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 158 - 296
Target Start/End: Complemental strand, 3432956 - 3432818
Alignment:
Q  158 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggta 257  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |  |    
T  3432956 ctgtcataccccaaattttgaccactttcctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttgaca 3432857  T
Q  258 gagaggatactttgaagtaactcattttttattcggagt 296  Q
     ||||| |||||||||||| |||||||||||||| ||||    
T  3432856 aagaggttactttgaagtacctcattttttattccgagt 3432818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 158 - 296
Target Start/End: Original strand, 31548522 - 31548660
Alignment:
Q  158 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggta 257  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || |    
T  31548522 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggca 31548621  T
Q  258 gagaggatactttgaagtaactcattttttattcggagt 296  Q
      |||| |||||||||||| ||||||||| |||| ||||    
T  31548622 aggaggttactttgaagtacctcatttttgattccgagt 31548660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 159 - 296
Target Start/End: Original strand, 31539954 - 31540091
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtag 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || |     
T  31539954 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 31540053  T
Q  259 agaggatactttgaagtaactcattttttattcggagt 296  Q
     |||| |||||||||||| ||||||||| |||| ||||    
T  31540054 ggaggttactttgaagtacctcatttttgattccgagt 31540091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 159 - 330
Target Start/End: Complemental strand, 41746758 - 41746586
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcgg-ta 257  Q
    ||||||| |||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||  |    
T  41746758 tgtcatatcccaaattttgaccacttttatctattcttatccattttattcatatttttaaagtcgggaattttcgtcgtttcagacaaaatttcggcaa 41746659  T
Q  258 gagaggatactttgaagtaactcattttttattcggagttgggctctgttccctcttcattttctttttattt 330  Q
     ||||| |||||||||||| |||||||||||||| |||| |||| || ||| ||||| |||||||||||||||    
T  41746658 aagaggttactttgaagtacctcattttttattccgagtcgggccctcttctctctttattttctttttattt 41746586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 159 - 296
Target Start/End: Complemental strand, 35104129 - 35103992
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtag 258  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| || |     
T  35104129 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagttgggaattttcgtcgtttcagacgaaattttggcaa 35104030  T
Q  259 agaggatactttgaagtaactcattttttattcggagt 296  Q
     |||| |||||||||||| ||||||||| |||| ||||    
T  35104029 ggaggttactttgaagtacctcatttttgattccgagt 35103992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 158 - 284
Target Start/End: Complemental strand, 29221554 - 29221429
Alignment:
Q  158 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggta 257  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||||||    |||||||||||||||||| |    
T  29221554 ctgtcataccccaaattttgactacttttctctatttttacccattttattcgtatttttaaagtcggaaattttcgctatttcagacgaaatttcggca 29221455  T
Q  258 gagaggatactttgaagtaactcattt 284  Q
    |||||| || |||||| || |||||||    
T  29221454 gagagg-tattttgaaatacctcattt 29221429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 159 - 284
Target Start/End: Complemental strand, 44320257 - 44320132
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtag 258  Q
    |||||||||||||||||||||||||||||||  || |||||||||||||||||||||| || | || |||   || ||||||||||||||||||| | ||    
T  44320257 tgtcataccccaaattttgaccacttttctcgctttttacccattttattcgtattttaaacgccgagaaggatcgtcgtttcagacgaaatttcagcag 44320158  T
Q  259 agaggatactttgaagtaactcattt 284  Q
     |||| |||||  ||||| |||||||    
T  44320157 ggaggttacttgaaagtacctcattt 44320132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 23223215 - 23223131
Alignment:
Q  1 gcatttgtcacactc-agtcatcatgtgattgtaccttactatgagattgaagcaattctaaatagacattcaaggtctatatca 84  Q
    ||||||| ||||||| | || ||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||    
T  23223215 gcatttgccacactccaatcgtcatgtgattgtaccttgctatgagattaaagcaattctaaatagacattcaaggtatatatca 23223131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 159 - 261
Target Start/End: Complemental strand, 21498963 - 21498861
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtag 258  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||  |||||| |||||||  ||| ||| | | |||||| |||||||||||||| ||    
T  21498963 tgtcataccccaaattttgaccacttttctctatttttacacatttcgttcgtacttttaaaaccggaaatgtccgtcgttttagacgaaatttcggcag 21498864  T
Q  259 aga 261  Q
    |||    
T  21498863 aga 21498861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 161 - 253
Target Start/End: Complemental strand, 51058450 - 51058359
Alignment:
Q  161 tcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttc 253  Q
    |||||||||||||||||| ||||||||| | |||| |  ||||||||||||||||||||||  |||||||||| | |||||| ||||||||||    
T  51058450 tcataccccaaattttgatcacttttctttgttct-attcattttattcgtatttttaaagctgggaattttcgttgtttcaaacgaaatttc 51058359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 161 - 276
Target Start/End: Original strand, 28457556 - 28457673
Alignment:
Q  161 tcataccccaaattttgaccacttttctc-tattcttacccatttta-ttcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtag 258  Q
    ||||||||||||||||||||||||||||| | || |||||||||||| || ||||||| || | |  |||   || ||||||||||||||||||||  ||    
T  28457556 tcataccccaaattttgaccacttttctcgtttttttacccattttattttgtattttaaacgccaagaaggatcgtcgtttcagacgaaatttcgacag 28457655  T
Q  259 agaggatactttgaagta 276  Q
    ||||| ||||||||||||    
T  28457656 agaggttactttgaagta 28457673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 284
Target Start/End: Complemental strand, 8241487 - 8241438
Alignment:
Q  235 tcgtttcagacgaaatttcggtagagaggatactttgaagtaactcattt 284  Q
    ||||||||||||||||||||||||||||| |||||| ||||| |||||||    
T  8241487 tcgtttcagacgaaatttcggtagagaggttactttaaagtacctcattt 8241438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 278 - 338
Target Start/End: Original strand, 13450142 - 13450202
Alignment:
Q  278 ctcattttttattcggagttgggctctgttccctcttcattttctttttatttcagtattt 338  Q
    ||||||||| |||| |||| ||||||| ||| ||||| |||||||||||||||||||||||    
T  13450142 ctcatttttgattccgagtcgggctctcttctctctttattttctttttatttcagtattt 13450202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 282
Target Start/End: Original strand, 8579341 - 8579413
Alignment:
Q  210 gtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcat 282  Q
    ||||||| ||||||| |  |||| ||| |||||||| ||||||||| || ||||||||||||||||| |||||    
T  8579341 gtattttaaaagtcgcgttttttaatcatttcagacaaaatttcggcagggaggatactttgaagtacctcat 8579413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 75
Target Start/End: Complemental strand, 31313072 - 31313020
Alignment:
Q  23 atgtgattgtaccttactatgagattgaagcaattctaaatagacattcaagg 75  Q
    |||| |||||||||| |||||||||| || |||||||||||||||| ||||||    
T  31313072 atgttattgtaccttgctatgagattaaaccaattctaaatagacaatcaagg 31313020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 27754837 - 27754786
Alignment:
Q  23 atgtgattgtaccttactatgagattgaagcaattctaaatagacattcaag 74  Q
    |||||||||||| ||||||||| |||||| |||||||||| ||| |||||||    
T  27754837 atgtgattgtacgttactatgatattgaaacaattctaaacagaaattcaag 27754786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 193
Target Start/End: Complemental strand, 20314092 - 20314058
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctatt 193  Q
    |||||||||||||||||||||||||||| ||||||    
T  20314092 tgtcataccccaaattttgaccacttttttctatt 20314058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 31313107 - 31313161
Alignment:
Q  23 atgtgattgtaccttactatgagattgaagcaattctaaatagacattcaaggtc 77  Q
    |||| |||||||||   ||||||||| ||||||||||||||||||| ||||||||    
T  31313107 atgttattgtacctggttatgagattaaagcaattctaaatagacaatcaaggtc 31313161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 282
Target Start/End: Complemental strand, 12465751 - 12465698
Alignment:
Q  229 ttttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcat 282  Q
    |||| ||| |||||||| ||||||||| || ||||||||||||||||| |||||    
T  12465751 ttttaatcatttcagacaaaatttcggcagggaggatactttgaagtacctcat 12465698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 220
Target Start/End: Original strand, 52100017 - 52100078
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaa 220  Q
    ||||||| || |||||||||||| |||||||| || |||| |||||| |||||| |||||||    
T  52100017 tgtcatatcctaaattttgaccatttttctctgtttttacacattttgttcgtacttttaaa 52100078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 94; Significance: 8e-46; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 159 - 296
Target Start/End: Complemental strand, 149 - 12
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtag 258  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||||  ||||||||||||||||| || |     
T  149 tgtcataccccaaattttgaccactttcctctattcttacccattttattcgtatttttaaagttgagaattttcgccgtttcagacgaaattttggcaa 50  T
Q  259 agaggatactttgaagtaactcattttttattcggagt 296  Q
    ||||| |||||||||||| |||||||||||||| ||||    
T  49 agaggttactttgaagtacctcattttttattccgagt 12  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 159 - 250
Target Start/End: Complemental strand, 40898 - 40807
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaat 250  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  40898 tgtcataccccaaattttgaccacttttctctattcttatccattttattcgtatttttaaagtcgagcattttcatcgtttcagacgaaat 40807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 159 - 285
Target Start/End: Complemental strand, 7255 - 7129
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtag 258  Q
    |||||||||| ||||||||||||||||||||| || |||||||||||||| ||| |||||||| || |||||||| | ||||||||||||||||||| ||    
T  7255 tgtcataccctaaattttgaccacttttctctgtttttacccattttatttgtacttttaaagccgagaattttcgttgtttcagacgaaatttcgggag 7156  T
Q  259 agaggatactttgaagtaactcatttt 285  Q
      ||| |||||||||||| ||||||||    
T  7155 gaaggttactttgaagtacctcatttt 7129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 159 - 284
Target Start/End: Original strand, 139 - 264
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtag 258  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| | | ||||||| |  |||||||||||||||||        
T  139 tgtcataccccaaattttgaccacttttctctatttctacccattttattcgtatttttaaagccagaaattttcgttatttcagacgaaatttcgacga 238  T
Q  259 agaggatactttgaagtaactcattt 284  Q
    ||||  |||||||||||| |||||||    
T  239 agagtttactttgaagtacctcattt 264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 159 - 284
Target Start/End: Complemental strand, 20547 - 20422
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtag 258  Q
    |||||||||||||||||||||||||||||| |  | |||| |||||| |||||| |||||||| || |||||||| | ||||||||||||||||||| ||    
T  20547 tgtcataccccaaattttgaccacttttctatggttttacacattttgttcgtacttttaaagccgagaattttcgttgtttcagacgaaatttcggcag 20448  T
Q  259 agaggatactttgaagtaactcattt 284  Q
    ||||| ||||||| |||| |||||||    
T  20447 agaggttactttggagtacctcattt 20422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0863 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0863
Description:

Target: scaffold0863; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 158 - 261
Target Start/End: Complemental strand, 438 - 335
Alignment:
Q  158 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggta 257  Q
    ||||||||||||||||||||||||||||||| |||| |||| |||||| |||||| |||||||  ||| ||| | |||||||| |||||||||||||| |    
T  438 ctgtcataccccaaattttgaccacttttctttatttttacacattttgttcgtacttttaaaaccggaaatgtccatcgttttagacgaaatttcggca 339  T
Q  258 gaga 261  Q
    ||||    
T  338 gaga 335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0991 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0991
Description:

Target: scaffold0991; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 159 - 252
Target Start/End: Complemental strand, 438 - 345
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaattt 252  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||| |||||| |||||||  ||| ||| | |||||||| |||||||||||    
T  438 tgtcataccccaaattttgaccacttttctctatttttacacattttgttcgtacttttaaaaccggaaatgtccatcgttttagacgaaattt 345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 49; Significance: 5e-19; HSPs: 2)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 159 - 231
Target Start/End: Complemental strand, 7694 - 7622
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattt 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||    ||||||||||| |||||||    
T  7694 tgtcataccccaaattttgaccacttttctctattcttacccatttttttgcattttttaaagtcaggaattt 7622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 332
Target Start/End: Complemental strand, 7621 - 7547
Alignment:
Q  258 gagaggatactttgaagtaactcattttttattcggagttgggctctgttccctcttcattttctttttatttca 332  Q
    |||||| |||||||||||| ||||||||||||||  ||| |  |||| ||| ||||| ||||||| |||||||||    
T  7621 gagaggttactttgaagtacctcattttttattcctagtcgaactctcttctctctttattttctctttatttca 7547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 157 - 253
Target Start/End: Original strand, 192526 - 192622
Alignment:
Q  157 gctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttc 253  Q
    ||||||||||||||||||||||||||||||||||||| ||||  ||||| |||||| |||||||  ||| ||| | | |||||| ||||||||||||    
T  192526 gctgtcataccccaaattttgaccacttttctctatttttacagattttgttcgtacttttaaaaccggaaatgtccgtcgttttagacgaaatttc 192622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 261
Target Start/End: Complemental strand, 65604 - 65501
Alignment:
Q  158 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggta 257  Q
    ||||||||||||||||||||  |||||||||||||| |||| |||||| |||||| |||||||  ||| ||| | | |||||| |||||||||||||| |    
T  65604 ctgtcataccccaaattttgtacacttttctctatttttacacattttgttcgtacttttaaaaccggaaatgtccgtcgttttagacgaaatttcggca 65505  T
Q  258 gaga 261  Q
    ||||    
T  65504 gaga 65501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 261
Target Start/End: Complemental strand, 81852 - 81749
Alignment:
Q  158 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggta 257  Q
    ||||||||||| |||||||||||||||||||||||| |||| |||||| |||||| |||||||  ||| ||| | | |||||| ||||||||||| || |    
T  81852 ctgtcataccctaaattttgaccacttttctctatttttacacattttgttcgtacttttaaaaccggaaatgtccgtcgttttagacgaaattttggca 81753  T
Q  258 gaga 261  Q
    ||||    
T  81752 gaga 81749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 158 - 261
Target Start/End: Original strand, 415 - 518
Alignment:
Q  158 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggta 257  Q
    ||||||||||| ||||||||||||||||||| || | |||| |||||| |||||| |||||||  ||| ||| | | |||||| |||||||||||||| |    
T  415 ctgtcataccctaaattttgaccacttttctttaattttacacattttgttcgtacttttaaaaccggaaatgtccgtcgttttagacgaaatttcggca 514  T
Q  258 gaga 261  Q
    ||||    
T  515 gaga 518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 208 - 285
Target Start/End: Complemental strand, 15837 - 15760
Alignment:
Q  208 tcgtatttttaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcatttt 285  Q
    |||| ||||||||| | ||||||||| ||| ||||||||||||| ||||||| ||| |||||||||||| ||||||||    
T  15837 tcgtctttttaaagccaggaattttcgtcgcttcagacgaaattacggtagataggttactttgaagtacctcatttt 15760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1487 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold1487
Description:

Target: scaffold1487; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 205
Target Start/End: Complemental strand, 801 - 762
Alignment:
Q  166 ccccaaattttgaccacttttctctattcttacccatttt 205  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  801 ccccaaattttgaccacttttctctattcttacccatttt 762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0514 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 10974 - 10912
Alignment:
Q  158 ctgtcataccccaaattttgaccacttttctctattcttacc-cattttattcgtatttttaaa 220  Q
    ||||||||||||||||||||||||||||| |||||| |||||  ||||||||||||||||||||    
T  10974 ctgtcataccccaaattttgaccactttt-tctatttttaccaaattttattcgtatttttaaa 10912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 227 - 338
Target Start/End: Complemental strand, 65701 - 65589
Alignment:
Q  227 aattttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcatttttt-attcggagttgggctctgttccctcttcattttctttt 325  Q
    ||||||| | ||||| ||||||||||||  | ||| | |||||||||||| |||||||||| |||| |||| || | || ||| ||||| ||||| ||||    
T  65701 aattttcgttgtttcggacgaaatttcgacaaagatgttactttgaagtacctcatttttttattccgagtcggacccttttctctctttattttatttt 65602  T
Q  326 tatttcagtattt 338  Q
    |||||||||||||    
T  65601 tatttcagtattt 65589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 192
Target Start/End: Complemental strand, 65744 - 65710
Alignment:
Q  158 ctgtcataccccaaattttgaccacttttctctat 192  Q
    ||||||||||| |||||||||||||||||||||||    
T  65744 ctgtcataccctaaattttgaccacttttctctat 65710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0990 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0990
Description:

Target: scaffold0990; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 94
Target Start/End: Complemental strand, 3127 - 3075
Alignment:
Q  42 tgagattgaagcaattctaaatagacattcaaggtctatatcaccatacacac 94  Q
    |||||||||||||||| |||||||||||| ||||| ||||||| || ||||||    
T  3127 tgagattgaagcaattataaatagacattgaaggtatatatcatcacacacac 3075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0315 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 285
Target Start/End: Complemental strand, 10651 - 10595
Alignment:
Q  229 ttttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcatttt 285  Q
    ||||| ||| ||||||||||||||||| | ||||| |||||||||||| ||||||||    
T  10651 ttttcgtcgcttcagacgaaatttcggcaaagaggttactttgaagtacctcatttt 10595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 11507 - 11457
Alignment:
Q  159 tgtcataccccaaattttgaccacttttct-ctattcttacccattttatt 208  Q
    |||| |||||||||||||||||| |||| | ||||||||||||||||||||    
T  11507 tgtcgtaccccaaattttgaccattttttttctattcttacccattttatt 11457  T

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Target: scaffold0455 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0455
Description:

Target: scaffold0455; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 282
Target Start/End: Complemental strand, 6109 - 6056
Alignment:
Q  229 ttttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcat 282  Q
    |||| ||| |||||||| ||||||||| || ||||||||||||||||| |||||    
T  6109 ttttaatcatttcagacaaaatttcggcagggaggatactttgaagtacctcat 6056  T

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Target: scaffold0047 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 282
Target Start/End: Original strand, 59736 - 59789
Alignment:
Q  229 ttttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcat 282  Q
    |||| ||| |||||||| ||||||||| || ||||||||||||||||| |||||    
T  59736 ttttaatcatttcagacaaaatttcggcagggaggatactttgaagtacctcat 59789  T

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Target: scaffold0007 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 285
Target Start/End: Original strand, 61288 - 61418
Alignment:
Q  159 tgtcataccccaaattttgaccacttttctcta-ttcttaccca-ttttattcgta---tttttaaagtcgggaattttcatcgtttcagacgaaatttc 253  Q
    |||||||||||||||||||||||| |||||||| || |||| || |||||||||||   ||||| ||| |   |||||||||  ||||| || |||||||    
T  61288 tgtcataccccaaattttgaccac-tttctctattttttactcatttttattcgtatttttttttaagccaaaaattttcattatttcaaacaaaatttc 61386  T
Q  254 ggtagagaggatactttgaagtaactcatttt 285  Q
     | | ||||| |||||||||||| ||||||||    
T  61387 agcatagaggttactttgaagtacctcatttt 61418  T

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Target: scaffold0323 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0323
Description:

Target: scaffold0323; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 338
Target Start/End: Complemental strand, 17669 - 17613
Alignment:
Q  282 ttttttattcggagttgggctctgttccctcttcattttctttttatttcagtattt 338  Q
    |||||||||| |||| |||| || ||| ||||| ||||||||||||||||| |||||    
T  17669 ttttttattccgagtcgggccctcttctctctttattttctttttatttcattattt 17613  T

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