View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF7829A_low_307 (Length: 249)
Name: NF7829A_low_307
Description: NF7829A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7829A_low_307 |
 | |
|
| [»] chr8 (4 HSPs) |
| |
|
| [»] chr1 (7 HSPs) |
| |
|
| [»] scaffold0012 (1 HSPs) |
| |
|
Alignment Details
Target: chr8 (Bit Score: 229; Significance: 1e-126; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 13 - 249
Target Start/End: Complemental strand, 24783051 - 24782815
Alignment:
| Q |
13 |
gatggacatcaacatcttgttgcctttcattctggccatggaatgtaccatctcctgagccacaataatattatggtggatacttctacctggaataaaa |
112 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24783051 |
gatggacatgaacatcttgttgcctttcattctggccatggaatgtaccatctcctgagccacaataatattatggtggatacttctacctggaataaaa |
24782952 |
T |
|
| Q |
113 |
ctggactgatatggagaaataataccatcaagcaacggcttgattctgttgacaataaccttagaaattatcttataaataacattacataaagcaatag |
212 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24782951 |
ctggactgatatggagaaataataccatcaagcaatggcttgattctgttgacaataaccttagaaattatcttataaataacattacataaagcaatag |
24782852 |
T |
|
| Q |
213 |
gtctaaattgagagacaaattcaggtttatcaatctt |
249 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24782851 |
gtctaaattgagagacaaattcaggtttatcaatctt |
24782815 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 17 - 249
Target Start/End: Original strand, 35197945 - 35198177
Alignment:
| Q |
17 |
gacatcaacatcttgttgcctttcattctggccatggaatgtaccatctcctgagccacaataatattatggtggatacttctacctggaataaaactgg |
116 |
Q |
| |
|
||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35197945 |
gacatgaacatcttgttgcctttcattcttgccatggaatgtaccatctcctgagccacaataatattatggtggatacttctacctggaataaaactgg |
35198044 |
T |
|
| Q |
117 |
actgatatggagaaataataccatcaagcaacggcttgattctgttgacaataaccttagaaattatcttataaataacattacataaagcaataggtct |
216 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35198045 |
actgatatggagaaataataccatcaagcaatggcttgattctgttgacaataaccttagatattatcttataaataacattacataaagcaataggtct |
35198144 |
T |
|
| Q |
217 |
aaattgagagacaaattcaggtttatcaatctt |
249 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
35198145 |
aaattgagagacaaattcaggtttatcaatctt |
35198177 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 35 - 245
Target Start/End: Complemental strand, 41998108 - 41997898
Alignment:
| Q |
35 |
cctttcattctggccatggaatgtaccatctcctgagccacaataatattatggtggatacttctacctggaataaaactggactgatatggagaaataa |
134 |
Q |
| |
|
||||||||| ||| ||| |||| |||||||| ||||| |||||||||||||| |||||||| | ||| ||||||||||| || ||||| || ||||||| |
|
|
| T |
41998108 |
cctttcattttggacatagaatacaccatctcttgagctacaataatattatgatggatactacgacccggaataaaactagattgataaggtgaaataa |
41998009 |
T |
|
| Q |
135 |
taccatcaagcaacggcttgattctgttgacaataaccttagaaattatcttataaataacattacataaagcaataggtctaaattgagagacaaattc |
234 |
Q |
| |
|
|| ||||||||| ||||| || || || |||||||| |||||||| || |||||||||||||| ||||||| |||||||||||||||||| ||||| || |
|
|
| T |
41998008 |
tattatcaagcaaaggcttaatcctattaacaataactttagaaataattttataaataacattgcataaagaaataggtctaaattgagaaacaaaatc |
41997909 |
T |
|
| Q |
235 |
aggtttatcaa |
245 |
Q |
| |
|
||| ||||||| |
|
|
| T |
41997908 |
aggcttatcaa |
41997898 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 100 - 246
Target Start/End: Original strand, 26619079 - 26619225
Alignment:
| Q |
100 |
acctggaataaaactggactgatatggagaaataataccatcaagcaacggcttgattctgttgacaataaccttagaaattatcttataaataacatta |
199 |
Q |
| |
|
||||||||||||||| |||| |||||||||||||||| ||||| ||| || || || ||||| ||||| || |||||||| || ||||| ||||||||| |
|
|
| T |
26619079 |
acctggaataaaactaaactggtatggagaaataatacgatcaaacaaaggtttaatcctgttaacaatcactttagaaataattttatatataacatta |
26619178 |
T |
|
| Q |
200 |
cataaagcaataggtctaaattgagagacaaattcaggtttatcaat |
246 |
Q |
| |
|
||||| | |||||| ||||| ||| | ||||||| ||||| ||||| |
|
|
| T |
26619179 |
cataatgaaataggcctaaactgataaacaaattatggtttctcaat |
26619225 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 229; Significance: 1e-126; HSPs: 7)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 13 - 249
Target Start/End: Original strand, 8057291 - 8057527
Alignment:
| Q |
13 |
gatggacatcaacatcttgttgcctttcattctggccatggaatgtaccatctcctgagccacaataatattatggtggatacttctacctggaataaaa |
112 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8057291 |
gatggacatgaacatcttgttgcctttcattctggccatggaatgtaccatctcctgagccacaataatattatggtggatacttctacctggaataaaa |
8057390 |
T |
|
| Q |
113 |
ctggactgatatggagaaataataccatcaagcaacggcttgattctgttgacaataaccttagaaattatcttataaataacattacataaagcaatag |
212 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8057391 |
ctggactgatatggagaaataataccatcaagcaatggcttgattctgttgacaataaccttagaaattatcttataaataacattacataaagcaatag |
8057490 |
T |
|
| Q |
213 |
gtctaaattgagagacaaattcaggtttatcaatctt |
249 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8057491 |
gtctaaattgagagacaaattcaggtttatcaatctt |
8057527 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 13 - 249
Target Start/End: Complemental strand, 36027889 - 36027653
Alignment:
| Q |
13 |
gatggacatcaacatcttgttgcctttcattctggccatggaatgtaccatctcctgagccacaataatattatggtggatacttctacctggaataaaa |
112 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36027889 |
gatggacatgaacatcttgttgcctttcattctggccatggaatgtaccatctcctgagccacaataatattatggtggatacttctacctggaataaaa |
36027790 |
T |
|
| Q |
113 |
ctggactgatatggagaaataataccatcaagcaacggcttgattctgttgacaataaccttagaaattatcttataaataacattacataaagcaatag |
212 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36027789 |
ctggactgatatggagaaataataccatcaagcaatggcttgattctgttgacaataaccttagaaattatcttataaataacattacataaagcaatag |
36027690 |
T |
|
| Q |
213 |
gtctaaattgagagacaaattcaggtttatcaatctt |
249 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36027689 |
gtctaaattgagagacaaattcaggtttatcaatctt |
36027653 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 13 - 249
Target Start/End: Original strand, 49574971 - 49575207
Alignment:
| Q |
13 |
gatggacatcaacatcttgttgcctttcattctggccatggaatgtaccatctcctgagccacaataatattatggtggatacttctacctggaataaaa |
112 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
49574971 |
gatggacatgaacatcttgttgcctttcattctggccatggaatgtaccatctcctgagccacaataatattatggtggatacttctacctggaataaaa |
49575070 |
T |
|
| Q |
113 |
ctggactgatatggagaaataataccatcaagcaacggcttgattctgttgacaataaccttagaaattatcttataaataacattacataaagcaatag |
212 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
49575071 |
ctggactgatatggagaaataataccatcaagcaatggcttgattctgttgacaataaccttagaaattatcttataaataacattacataaagcaatag |
49575170 |
T |
|
| Q |
213 |
gtctaaattgagagacaaattcaggtttatcaatctt |
249 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
49575171 |
gtctaaattgagagacaaattcaggtttatcaatctt |
49575207 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 13 - 242
Target Start/End: Original strand, 46021335 - 46021564
Alignment:
| Q |
13 |
gatggacatcaacatcttgttgcctttcattctggccatggaatgtaccatctcctgagccacaataatattatggtggatacttctacctggaataaaa |
112 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
46021335 |
gatggacatgaacatcttgttgcctttcattctggccatggaatgtaccatctcctgagccacaataatattatggtggatacttctacctggaataaaa |
46021434 |
T |
|
| Q |
113 |
ctggactgatatggagaaataataccatcaagcaacggcttgattctgttgacaataaccttagaaattatcttataaataacattacataaagcaatag |
212 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
46021435 |
ctggactgatatggagaaataataccatcaagcaatggcttgattctgttgacaataaccttagagattatcttataaataacattacataaagcaatag |
46021534 |
T |
|
| Q |
213 |
gtctaaattgagagacaaattcaggtttat |
242 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
46021535 |
gtctaaattgagagacaaattcaggtttat |
46021564 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 59 - 246
Target Start/End: Complemental strand, 5306609 - 5306422
Alignment:
| Q |
59 |
accatctcctgagccacaataatattatggtggatacttctacctggaataaaactggactgatatggagaaataataccatcaagcaacggcttgattc |
158 |
Q |
| |
|
||||| || |||||||||||||| || ||||| || | | ||||||||||||||| ||||| |||||||||||||||| ||||||||| || || || | |
|
|
| T |
5306609 |
accatttcttgagccacaataatgttgtggtgtatgttacgacctggaataaaactagactggtatggagaaataatacgatcaagcaaaggtttaatcc |
5306510 |
T |
|
| Q |
159 |
tgttgacaataaccttagaaattatcttataaataacattacataaagcaataggtctaaattgagagacaaattcaggtttatcaat |
246 |
Q |
| |
|
|||| ||||| || |||||||| || |||||||||||||||||||| | |||||| ||||| ||||| |||||||| ||||| ||||| |
|
|
| T |
5306509 |
tgttaacaatcactttagaaataattttataaataacattacataatgaaataggcctaaactgagaaacaaattctggtttctcaat |
5306422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 59 - 246
Target Start/End: Complemental strand, 23947582 - 23947395
Alignment:
| Q |
59 |
accatctcctgagccacaataatattatggtggatacttctacctggaataaaactggactgatatggagaaataataccatcaagcaacggcttgattc |
158 |
Q |
| |
|
||||| || |||||||||||||| || ||||| || | | ||||||||||||||| ||||| |||||||||||||||| |||||| || || || || |
|
|
| T |
23947582 |
accatttcttgagccacaataatgttgtggtgtatgttacgacctggaataaaactagactggtatggagaaataatacgatcaaggaaaggtttaatct |
23947483 |
T |
|
| Q |
159 |
tgttgacaataaccttagaaattatcttataaataacattacataaagcaataggtctaaattgagagacaaattcaggtttatcaat |
246 |
Q |
| |
|
|||| ||||| || |||||||| || |||||||||||||||||||| | |||||| ||||| ||||| |||||||| ||||| ||||| |
|
|
| T |
23947482 |
tgttaacaatcactttagaaataattttataaataacattacataatgaaataggcctaaactgagaaacaaattctggtttctcaat |
23947395 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 59 - 246
Target Start/End: Original strand, 50954817 - 50955004
Alignment:
| Q |
59 |
accatctcctgagccacaataatattatggtggatacttctacctggaataaaactggactgatatggagaaataataccatcaagcaacggcttgattc |
158 |
Q |
| |
|
||||| || |||||||||||||| || ||||| || | | |||| |||||||||| ||||| |||||||||||||||| ||||||||| || || || |
|
|
| T |
50954817 |
accatttcttgagccacaataatgttgtggtgtatgttacgacctagaataaaactagactggtatggagaaataatacgatcaagcaaaggtttaatca |
50954916 |
T |
|
| Q |
159 |
tgttgacaataaccttagaaattatcttataaataacattacataaagcaataggtctaaattgagagacaaattcaggtttatcaat |
246 |
Q |
| |
|
|||| ||||| || |||||||| || ||||| |||||||||||||| | |||||| ||||| ||||| |||||||| ||||| ||||| |
|
|
| T |
50954917 |
tgttaacaatcactttagaaataattttatatataacattacataatgaaataggcctaaactgagaaacaaattctggtttctcaat |
50955004 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0012 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: scaffold0012
Description:
Target: scaffold0012; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 13 - 249
Target Start/End: Original strand, 111242 - 111478
Alignment:
| Q |
13 |
gatggacatcaacatcttgttgcctttcattctggccatggaatgtaccatctcctgagccacaataatattatggtggatacttctacctggaataaaa |
112 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
111242 |
gatggacatgaacatcttgttgcctttcattctagccatggaatgtaccatctcctgagcgacaataatattatggtggatacttctacctggaataaaa |
111341 |
T |
|
| Q |
113 |
ctggactgatatggagaaataataccatcaagcaacggcttgattctgttgacaataaccttagaaattatcttataaataacattacataaagcaatag |
212 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
111342 |
ctggactgatatggagaaataataccatcaagcaaaggcttgattctgttgacaataaccttagaaattatcttataaataacattacataaagcaatag |
111441 |
T |
|
| Q |
213 |
gtctaaattgagagacaaattcaggtttatcaatctt |
249 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
111442 |
gtctaaattgagagacaaattcaggtttatcaatctt |
111478 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 83; Significance: 2e-39; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 35 - 245
Target Start/End: Complemental strand, 8033539 - 8033329
Alignment:
| Q |
35 |
cctttcattctggccatggaatgtaccatctcctgagccacaataatattatggtggatacttctacctggaataaaactggactgatatggagaaataa |
134 |
Q |
| |
|
||||||||| ||| ||| |||| |||||||| ||||| |||||||||||||| ||||| || | | | ||||||||||| || ||||| || ||||||| |
|
|
| T |
8033539 |
cctttcattttggacatagaatacaccatctcttgagctacaataatattatgatggatgctacgaaccggaataaaactagattgataaggtgaaataa |
8033440 |
T |
|
| Q |
135 |
taccatcaagcaacggcttgattctgttgacaataaccttagaaattatcttataaataacattacataaagcaataggtctaaattgagagacaaattc |
234 |
Q |
| |
|
|| ||||||||| ||||| || || || |||||||| |||||||| || |||||||||||||| ||||||| |||||||||||||||||| ||||| || |
|
|
| T |
8033439 |
tattatcaagcaaaggcttaatcctattaacaataactttagaaataattttataaataacattgcataaagaaataggtctaaattgagaaacaaaatc |
8033340 |
T |
|
| Q |
235 |
aggtttatcaa |
245 |
Q |
| |
|
||| ||||||| |
|
|
| T |
8033339 |
aggcttatcaa |
8033329 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 61 - 245
Target Start/End: Original strand, 22944944 - 22945128
Alignment:
| Q |
61 |
catctcctgagccacaataatattatggtggatacttctacctggaataaaactggactgatatggagaaataataccatcaagcaacggcttgattctg |
160 |
Q |
| |
|
|||||| ||||| |||||||||||||| ||||| || | ||| ||||||||||| || ||||| || ||||||||| ||||||||| ||||| || || |
|
|
| T |
22944944 |
catctcttgagctacaataatattatgatggatgctacgacccggaataaaactagattgataaggtgaaataatattatcaagcaaaggcttaatccta |
22945043 |
T |
|
| Q |
161 |
ttgacaataaccttagaaattatcttataaataacattacataaagcaataggtctaaattgagagacaaattcaggtttatcaa |
245 |
Q |
| |
|
|| |||||||| |||||||| || |||||||||||||| ||||||| |||||||||||||||||| ||||| ||||| ||||||| |
|
|
| T |
22945044 |
ttaacaataactttagaaataattttataaataacattgcataaagaaataggtctaaattgagaaacaaaatcaggcttatcaa |
22945128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 47 - 210
Target Start/End: Complemental strand, 1610509 - 1610346
Alignment:
| Q |
47 |
gccatggaatgtaccatctcctgagccacaataatattatggtggatacttctacctggaataaaactggactgatatggagaaataataccatcaagca |
146 |
Q |
| |
|
||||||||||||||||||| |||||||||||| |||||||||||||| ||| |||| |||||| || || ||||| |||||||| || ||||| | || |
|
|
| T |
1610509 |
gccatggaatgtaccatcttctgagccacaatgatattatggtggattgttcgtcctgaaataaagctagattgataaggagaaatgattccatctaaca |
1610410 |
T |
|
| Q |
147 |
acggcttgattctgttgacaataaccttagaaattatcttataaataacattacataaagcaat |
210 |
Q |
| |
|
| || |||||||| || ||||||||||||| ||| || |||||| | ||||||| |||||||| |
|
|
| T |
1610409 |
aaggtttgattctattaacaataaccttagtaatgatgttataagtcccattacacaaagcaat |
1610346 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 77; Significance: 8e-36; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 59 - 243
Target Start/End: Complemental strand, 46426442 - 46426258
Alignment:
| Q |
59 |
accatctcctgagccacaataatattatggtggatacttctacctggaataaaactggactgatatggagaaataataccatcaagcaacggcttgattc |
158 |
Q |
| |
|
|||||||| | ||||||||||||||| ||||| || |||| ||||||||||||||| ||||| |||||| ||||||| | ||||||||| ||||| || | |
|
|
| T |
46426442 |
accatctctttagccacaataatattgtggtgaatgcttcgacctggaataaaactagactggtatggaaaaataattctatcaagcaaaggcttaatcc |
46426343 |
T |
|
| Q |
159 |
tgttgacaataaccttagaaattatcttataaataacattacataaagcaataggtctaaattgagagacaaattcaggtttatc |
243 |
Q |
| |
|
|||| ||||| |||||||||||||| ||||| ||||||||||| | | |||||| |||||||| | ||||||| ||||||||| |
|
|
| T |
46426342 |
tgttaacaatcaccttagaaattattttatagataacattacaaagggaaataggcctaaattgttaaacaaatttaggtttatc |
46426258 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 59 - 243
Target Start/End: Original strand, 54814562 - 54814746
Alignment:
| Q |
59 |
accatctcctgagccacaataatattatggtggatacttctacctggaataaaactggactgatatggagaaataataccatcaagcaacggcttgattc |
158 |
Q |
| |
|
|||||||| | ||||| ||||||||| ||||| || |||| ||||||||||||||| ||||| |||||||||||||| | ||||||||| ||||| || |
|
|
| T |
54814562 |
accatctctttagccataataatattgtggtgaatgcttcgacctggaataaaactagactggtatggagaaataattctatcaagcaaaggcttaatca |
54814661 |
T |
|
| Q |
159 |
tgttgacaataaccttagaaattatcttataaataacattacataaagcaataggtctaaattgagagacaaattcaggtttatc |
243 |
Q |
| |
|
|||| ||||| |||||||||||||| ||||| ||| ||||||| | | |||||| ||||||| || ||||||||||||||||| |
|
|
| T |
54814662 |
tgttaacaatgaccttagaaattattttatatataccattacaaagggaaataggcttaaattgtgaaacaaattcaggtttatc |
54814746 |
T |
|
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Target: chr2 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 34567147 - 34567098
Alignment:
| Q |
103 |
tggaataaaactggactgatatggagaaataataccatcaagcaacggct |
152 |
Q |
| |
|
|||||||||| | ||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
34567147 |
tggaataaaattagactggtatggagaaataataccatcaagcaacggct |
34567098 |
T |
|
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